Cow genome map
| Conread name: | Ss1.1-rret01_o2.5 |
| Conread position: | 1-187 |
| Cow position: | chr8:45201820-45202006 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-284 |
| Cow position: | chr8:45201652-45201937 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 213, 274 |
| Conread position: | 1-311 |
| Cow position: | chr8:45201484-45201796 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 213, 0 |
| Conread position: | 2-305 |
| Cow position: | chr8:46816848-46817153 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 212, 272 |
| Conread position: | 3-208 |
| Cow position: | chr8:46817185-46817390 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-295 |
| Cow position: | chr8:46816513-46816807 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 211, 272 |
| Conread position: | 3-301 |
| Cow position: | chr8:46816765-46817065 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 3-305 |
| Cow position: | chr8:46816177-46816481 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 3-305 |
| Cow position: | chr8:46816681-46816985 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 169, 148 |
| Conread position: | 3-308 |
| Cow position: | chr8:48407246-48406939 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 79 |
| Conread position: | 3-309 |
| Cow position: | chr8:46816261-46816569 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 211, 272 |
| Conread position: | 4-234 |
| Cow position: | chr8:48407581-48407350 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 5-309 |
| Cow position: | chr8:45200898-45201206 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 7, 272 |
| Conread position: | 9-204 |
| Cow position: | chr8:48406568-48406373 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-212 |
| Cow position: | chr8:46816015-46816218 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-242 |
| Cow position: | chr8:48406988-48406753 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 192, 199 |
| Conread position: | 9-242 |
| Cow position: | chr8:55581128-55581363 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 9-287 |
| Cow position: | chr8:46816351-46816632 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 202, 0 |
| Conread position: | 9-304 |
| Cow position: | chr8:46817023-46817320 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 205, 226 |
| Conread position: | 9-305 |
| Cow position: | chr8:46816099-46816397 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 79, 69 |
| Conread position: | 9-305 |
| Cow position: | chr8:46816603-46816901 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 205, 226 |
| Conread position: | 9-305 |
| Cow position: | chr8:48407408-48407110 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 205, 266 |
| Conread position: | 9-309 |
| Cow position: | chr8:45200988-45201290 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 212, 247 |
| Conread position: | 9-312 |
| Cow position: | chr8:45201240-45201545 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 204, 272 |
| Conread position: | 15-305 |
| Cow position: | chr8:45201582-45201874 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 199, 260 |
| Conread position: | 16-311 |
| Cow position: | chr8:45201163-45201460 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 17-204 |
| Cow position: | chr8:48407064-48406877 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-262 |
| Cow position: | chr8:45201752-45201999 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 188, 222 |
| Conread position: | 17-308 |
| Cow position: | chr8:55581220-55581513 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 162, 137 |
| Conread position: | 17-309 |
| Cow position: | chr8:45201416-45201710 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 197, 258 |
| Conread position: | 18-208 |
| Cow position: | chr8:55580885-55581075 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 154, 139 |
| Conread position: | 18-237 |
| Cow position: | chr8:55581473-55581693 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 188, 198 |
| Conread position: | 21-309 |
| Cow position: | chr8:46815940-46816233 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 232 |
Show alignments to all cow chromosomes.