Cow genome map


           Conread name:
           Ss1.1-rret01_o2.5
        

               Conread position:
               1-187
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               213, 274
               

               Conread position:
               1-311
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               2-305
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               212, 272
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               211, 272
               

               Conread position:
               3-301
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               3-305
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               208, 0
               

               Conread position:
               3-305
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               169, 148
               

               Conread position:
               3-308
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               91, 79
               

               Conread position:
               3-309
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               211, 272
               

               Conread position:
               4-234
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               207, 0
               

               Conread position:
               5-309
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               7, 272
               

               Conread position:
               9-204
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-212
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-242
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               192, 199
               

               Conread position:
               9-242
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               205, 0
               

               Conread position:
               9-287
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               9-304
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               205, 226
               

               Conread position:
               9-305
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               9-305
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               205, 226
               

               Conread position:
               9-305
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               205, 266
               

               Conread position:
               9-309
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               212, 247
               

               Conread position:
               9-312
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               204, 272
               

               Conread position:
               15-305
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               199, 260
               

               Conread position:
               16-311
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               17-204
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-262
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               188, 222
               

               Conread position:
               17-308
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               162, 137
               

               Conread position:
               17-309
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               197, 258
               

               Conread position:
               18-208
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               154, 139
               

               Conread position:
               18-237
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               188, 198
               

               Conread position:
               21-309
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 232
               
Show alignments to all cow chromosomes.