Cow genome map

Conread name: Ss1.1-rret01_o2.5

Conread position: 1-295
Cow position: chrX:25324701-25324405 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 167, 150

Conread position: 1-305
Cow position: chrX:25309768-25310074 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 1-305
Cow position: chrX:29045130-29044824 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 1-309
Cow position: chrX:25325205-25324895 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 2-305
Cow position: chrX:25325456-25325151 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 212, 273

Conread position: 3-212
Cow position: chrX:25309938-25310147 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 3-294
Cow position: chrX:25324615-25324324 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 201, 254

Conread position: 3-295
Cow position: chrX:29045212-29044918 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 211, 0

Conread position: 3-309
Cow position: chrX:25325707-25325399 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 97

Conread position: 9-139
Cow position: chrX:25310448-25310578 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 9-143
Cow position: chrX:29044786-29044652 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 9-242
Cow position: chrX:25310028-25310262 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 205, 0

Conread position: 9-290
Cow position: chrX:29044954-29044671 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 9-292
Cow position: chrX:25325281-25324996 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 205, 266

Conread position: 9-295
Cow position: chrX:25324861-25324573 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 204, 0

Conread position: 9-295
Cow position: chrX:25325029-25324741 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 202, 266

Conread position: 9-305
Cow position: chrX:25325533-25325235 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 9-312
Cow position: chrX:25324777-25324472 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 205, 0

Conread position: 9-495
Cow position: chrX:29045605-29045111 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 312
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 192, 423

Conread position: 11-309
Cow position: chrX:29045288-29044988 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 193
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 203, 264

Conread position: 13-212
Cow position: chrX:29045685-29045486 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 13-305
Cow position: chrX:25309696-25309990 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 195
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 159, 152

Conread position: 13-305
Cow position: chrX:29045367-29045076 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 190
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 202, 35

Conread position: 15-295
Cow position: chrX:25325611-25325329 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 199, 232

Conread position: 16-212
Cow position: chrX:25310371-25310567 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 17-232
Cow position: chrX:25310204-25310420 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 197, 0

Conread position: 17-308
Cow position: chrX:25310120-25310413 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 155, 160

Conread position: 18-307
Cow position: chrX:25310289-25310580 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 188
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 196, 0

Conread position: 24-301
Cow position: chrX:29045758-29045477 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 189, 0

Conread position: 37-311
Cow position: chrX:25325842-25325565 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 46

Show alignments to all cow chromosomes.