Cow genome map
| Conread name: | Ss1.1-rret12_i15.5 |
| Conread position: | 162-344 |
| Cow position: | chr10:804395-804221 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 162-345 |
| Cow position: | chr10:47342409-47342226 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 104 |
| Conread position: | 162-346 |
| Cow position: | chr10:13419784-13419609 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 162-346 |
| Cow position: | chr10:37983100-37983285 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 111 |
| Conread position: | 162-347 |
| Cow position: | chr10:17963154-17962973 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 162-347 |
| Cow position: | chr10:26812332-26812148 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 87, 65 |
| Conread position: | 162-349 |
| Cow position: | chr10:2234641-2234831 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 72, 113 |
| Conread position: | 162-349 |
| Cow position: | chr10:31630726-31630914 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 61, 113 |
| Conread position: | 162-349 |
| Cow position: | chr10:32617663-32617471 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 67, 6 |
| Conread position: | 162-349 |
| Cow position: | chr10:66782417-66782227 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 112 |
| Conread position: | 162-351 |
| Cow position: | chr10:68514542-68514358 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 163-349 |
| Cow position: | chr10:18322108-18321922 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 37, 41 |
| Conread position: | 164-346 |
| Cow position: | chr10:39482930-39482745 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 166-328 |
| Cow position: | chr10:17229756-17229913 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 166-336 |
| Cow position: | chr10:46874223-46874052 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 57, 109 |
| Conread position: | 173-349 |
| Cow position: | chr10:28513894-28514061 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 214-349 |
| Cow position: | chr10:45877510-45877642 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 225-345 |
| Cow position: | chr10:65760025-65759908 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 226-355 |
| Cow position: | chr10:39065899-39065773 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 227-347 |
| Cow position: | chr10:46739279-46739162 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 227-349 |
| Cow position: | chr10:43667213-43667332 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 227-349 |
| Cow position: | chr10:51725415-51725299 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 227-349 |
| Cow position: | chr10:63485679-63485556 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 227-349 |
| Cow position: | chr10:67843625-67843506 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 228-349 |
| Cow position: | chr10:53745616-53745733 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 228-349 |
| Cow position: | chr10:57751796-57751679 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 228-349 |
| Cow position: | chr10:66962494-66962609 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 229-349 |
| Cow position: | chr10:41768283-41768168 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 229-350 |
| Cow position: | chr10:32972644-32972762 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 231-349 |
| Cow position: | chr10:20546824-20546940 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 109, 38 |
Show alignments to all cow chromosomes.