Cow genome map


           Conread name:
           Ss1.1-rret12_i15.5
        

               Conread position:
               126-349
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               162-347
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 73
               

               Conread position:
               162-349
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 112
               

               Conread position:
               162-349
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               61, 113
               

               Conread position:
               162-349
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               72, 14
               

               Conread position:
               162-349
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               162-349
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               65, 126
               

               Conread position:
               163-329
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               163-346
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               66, 116
               

               Conread position:
               163-349
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               36, 13
               

               Conread position:
               163-349
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 125
               

               Conread position:
               164-348
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               165-345
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               21, 29
               

               Conread position:
               167-349
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               62, 107
               

               Conread position:
               167-349
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               168-344
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               168-347
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 8
               

               Conread position:
               176-349
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               56, 99
               

               Conread position:
               176-349
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               25, 100
               

               Conread position:
               176-351
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               186-347
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               205-346
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               214-343
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               214-349
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               214-349
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               221-349
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               224-348
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               225-330
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               225-349
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               227-346
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               227-347
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               227-349
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               227-349
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               5, 43
               

               Conread position:
               227-350
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               227-350
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               227-383
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               227-418
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               162
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               124, 42
               

               Conread position:
               228-346
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               228-349
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               228-352
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               229-349
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               244-350
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               249-349
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 0
               
Show alignments to all cow chromosomes.