Cow genome map


           Conread name:
           Ss1.1-rret12_i15.5
        

               Conread position:
               148-348
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               162-345
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               59, 14
               

               Conread position:
               162-347
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               162-348
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 128
               

               Conread position:
               162-348
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               162-349
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               31, 120
               

               Conread position:
               162-349
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 14
               

               Conread position:
               162-349
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               162-349
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               62, 111
               

               Conread position:
               162-349
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               59, 116
               

               Conread position:
               162-349
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               98, 78
               

               Conread position:
               162-416
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               163-346
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 124
               

               Conread position:
               163-347
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               64, 34
               

               Conread position:
               163-347
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               100, 24
               

               Conread position:
               163-348
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 119
               

               Conread position:
               163-363
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               169-348
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 104
               

               Conread position:
               173-347
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               12, 102
               

               Conread position:
               174-350
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               7, 104
               

               Conread position:
               176-349
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               52, 97
               

               Conread position:
               176-349
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               47, 99
               

               Conread position:
               181-413
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               218-349
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               109, 9
               

               Conread position:
               225-349
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               227-346
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               227-349
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               227-349
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               227-350
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               228-349
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               229-349
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               230-349
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               230-349
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               238-347
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               31, 0
               
Show alignments to all cow chromosomes.