Cow genome map
| Conread name: | Ss1.1-rret12_i15.5 |
| Conread position: | 87-349 |
| Cow position: | chr15:28715688-28715944 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 162, 18 |
| Conread position: | 155-349 |
| Cow position: | chr15:47443941-47443749 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 162-322 |
| Cow position: | chr15:39035847-39036002 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 54, 107 |
| Conread position: | 162-330 |
| Cow position: | chr15:51614450-51614283 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 162-350 |
| Cow position: | chr15:9741084-9740893 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 36, 114 |
| Conread position: | 163-349 |
| Cow position: | chr15:26066834-26066633 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 124 |
| Conread position: | 164-347 |
| Cow position: | chr15:40300681-40300867 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 59, 111 |
| Conread position: | 168-349 |
| Cow position: | chr15:10829250-10829067 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 101 |
| Conread position: | 180-349 |
| Cow position: | chr15:42885821-42885651 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 49, 101 |
| Conread position: | 221-349 |
| Cow position: | chr15:545579-545455 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 227-349 |
| Cow position: | chr15:29603133-29603250 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 228-349 |
| Cow position: | chr15:16625821-16625702 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 99, 41 |
| Conread position: | 228-349 |
| Cow position: | chr15:38543762-38543881 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 228-350 |
| Cow position: | chr15:11649172-11649055 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 229-403 |
| Cow position: | chr15:44122704-44122530 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 148, 88 |
Show alignments to all cow chromosomes.