Cow genome map
| Conread name: | Ss1.1-rret12_i15.5 |
| Conread position: | 155-349 |
| Cow position: | chr16:37576464-37576649 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 162-347 |
| Cow position: | chr16:53270024-53270218 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 72, 31 |
| Conread position: | 162-348 |
| Cow position: | chr16:11588523-11588336 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 6 |
| Conread position: | 162-349 |
| Cow position: | chr16:31732145-31732326 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 59, 42 |
| Conread position: | 162-349 |
| Cow position: | chr16:33149722-33149910 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 64, 110 |
| Conread position: | 162-349 |
| Cow position: | chr16:54925396-54925588 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 79, 177 |
| Conread position: | 163-347 |
| Cow position: | chr16:44753785-44753967 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 163-349 |
| Cow position: | chr16:15995843-15996028 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 164-348 |
| Cow position: | chr16:35159745-35159575 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 166-349 |
| Cow position: | chr16:13350983-13351171 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 35 |
| Conread position: | 166-349 |
| Cow position: | chr16:40665180-40665370 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 68, 113 |
| Conread position: | 167-414 |
| Cow position: | chr16:2537628-2537393 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 68 |
| Conread position: | 168-355 |
| Cow position: | chr16:13411465-13411650 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 95, 71 |
| Conread position: | 169-349 |
| Cow position: | chr16:2703354-2703171 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 54, 121 |
| Conread position: | 176-341 |
| Cow position: | chr16:12729214-12729047 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 184-342 |
| Cow position: | chr16:23007501-23007655 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 6, 44 |
| Conread position: | 185-349 |
| Cow position: | chr16:598737-598580 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 214-346 |
| Cow position: | chr16:43838857-43838729 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 224-350 |
| Cow position: | chr16:19307355-19307230 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 103, 45 |
| Conread position: | 225-349 |
| Cow position: | chr16:47484757-47484636 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 226-349 |
| Cow position: | chr16:51983628-51983510 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 227-349 |
| Cow position: | chr16:9410177-9410055 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 227-349 |
| Cow position: | chr16:13317339-13317458 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 30 |
| Conread position: | 229-349 |
| Cow position: | chr16:42341260-42341377 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 51 |
| Conread position: | 230-345 |
| Cow position: | chr16:52946312-52946425 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 239-349 |
| Cow position: | chr16:38119630-38119738 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 38 |
Show alignments to all cow chromosomes.