Cow genome map
| Conread name: | Ss1.1-rret12_i15.5 |
| Conread position: | 162-349 |
| Cow position: | chr21:908097-907918 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 162-349 |
| Cow position: | chr21:43803775-43803965 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 25, 110 |
| Conread position: | 162-349 |
| Cow position: | chr21:45299239-45299052 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 37, 120 |
| Conread position: | 163-347 |
| Cow position: | chr21:29868617-29868435 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 92 |
| Conread position: | 163-349 |
| Cow position: | chr21:34167103-34167284 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 166-349 |
| Cow position: | chr21:33974013-33973829 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 167-349 |
| Cow position: | chr21:30171035-30171218 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 108 |
| Conread position: | 170-348 |
| Cow position: | chr21:45450882-45450707 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 98, 27 |
| Conread position: | 171-349 |
| Cow position: | chr21:11300205-11300385 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 183-349 |
| Cow position: | chr21:6690234-6690402 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 89 |
| Conread position: | 214-349 |
| Cow position: | chr21:22744062-22744194 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 217-349 |
| Cow position: | chr21:10796341-10796211 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 9, 47 |
| Conread position: | 227-349 |
| Cow position: | chr21:8381544-8381664 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 227-349 |
| Cow position: | chr21:41540176-41540295 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 227-349 |
| Cow position: | chr21:42907022-42907141 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 228-349 |
| Cow position: | chr21:24090012-24089895 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 228-349 |
| Cow position: | chr21:27197874-27197756 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 231-349 |
| Cow position: | chr21:16800385-16800270 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.