Cow genome map
| Conread name: | Ss1.1-rret12_i15.5 |
| Conread position: | 162-321 |
| Cow position: | chr23:29662898-29663060 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 124 |
| Conread position: | 162-324 |
| Cow position: | chr23:15621230-15621066 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 162-340 |
| Cow position: | chr23:34097095-34096925 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 19, 61 |
| Conread position: | 162-340 |
| Cow position: | chr23:40754423-40754603 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 113 |
| Conread position: | 162-349 |
| Cow position: | chr23:182969-182779 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 67, 113 |
| Conread position: | 162-349 |
| Cow position: | chr23:7563181-7563369 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 60, 102 |
| Conread position: | 162-349 |
| Cow position: | chr23:22691836-22691643 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 162-349 |
| Cow position: | chr23:26909257-26909445 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 61, 124 |
| Conread position: | 162-349 |
| Cow position: | chr23:29149953-29149777 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 162-349 |
| Cow position: | chr23:34313579-34313768 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 163-349 |
| Cow position: | chr23:12148555-12148367 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 163-349 |
| Cow position: | chr23:22985920-22986103 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 163-349 |
| Cow position: | chr23:22987045-22987228 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 164-349 |
| Cow position: | chr23:25133160-25133347 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 12 |
| Conread position: | 166-345 |
| Cow position: | chr23:33003670-33003847 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 167-349 |
| Cow position: | chr23:10683718-10683531 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 170-333 |
| Cow position: | chr23:31071298-31071135 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 94 |
| Conread position: | 176-349 |
| Cow position: | chr23:37844585-37844407 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 205-349 |
| Cow position: | chr23:25142394-25142540 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 214-326 |
| Cow position: | chr23:33509888-33509998 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 218-349 |
| Cow position: | chr23:24255543-24255415 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 227-345 |
| Cow position: | chr23:27100548-27100663 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 227-346 |
| Cow position: | chr23:30680299-30680416 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 233-349 |
| Cow position: | chr23:37430741-37430854 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 234-349 |
| Cow position: | chr23:670268-670157 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 234-349 |
| Cow position: | chr23:12586250-12586369 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
Show alignments to all cow chromosomes.