Cow genome map
| Conread name: | Ss1.1-rret12_i15.5 |
| Conread position: | 148-349 |
| Cow position: | chr24:17104425-17104212 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 54 |
| Conread position: | 162-349 |
| Cow position: | chr24:889723-889907 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 162-349 |
| Cow position: | chr24:5678544-5678734 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 116, 77 |
| Conread position: | 162-349 |
| Cow position: | chr24:26249995-26249815 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 66, 23 |
| Conread position: | 164-349 |
| Cow position: | chr24:27649777-27649965 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 42, 116 |
| Conread position: | 167-349 |
| Cow position: | chr24:44855588-44855403 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 60, 109 |
| Conread position: | 176-328 |
| Cow position: | chr24:9733853-9734010 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 193-347 |
| Cow position: | chr24:37702356-37702203 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 214-348 |
| Cow position: | chr24:2306494-2306366 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 214-349 |
| Cow position: | chr24:32344617-32344749 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 225-349 |
| Cow position: | chr24:18362228-18362350 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 45 |
| Conread position: | 227-347 |
| Cow position: | chr24:405310-405197 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 227-349 |
| Cow position: | chr24:7092617-7092736 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 227-355 |
| Cow position: | chr24:17529249-17529123 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 124, 12 |
| Conread position: | 228-341 |
| Cow position: | chr24:39751354-39751461 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.