Cow genome map
| Conread name: | Ss1.1-rret12_i15.5 |
| Conread position: | 162-336 |
| Cow position: | chr28:4392527-4392696 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 67, 110 |
| Conread position: | 162-347 |
| Cow position: | chr28:31371591-31371408 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 162-349 |
| Cow position: | chr28:24192955-24192774 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 163-347 |
| Cow position: | chr28:21178457-21178627 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 163-349 |
| Cow position: | chr28:6855130-6855312 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 163-349 |
| Cow position: | chr28:34283300-34283492 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 57, 177 |
| Conread position: | 168-347 |
| Cow position: | chr28:4066616-4066797 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 68, 103 |
| Conread position: | 169-349 |
| Cow position: | chr28:20111717-20111894 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 94 |
| Conread position: | 176-349 |
| Cow position: | chr28:25016300-25016129 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 52, 109 |
| Conread position: | 177-355 |
| Cow position: | chr28:23665550-23665377 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 174, 20 |
| Conread position: | 193-347 |
| Cow position: | chr28:23917971-23917816 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 93 |
| Conread position: | 194-349 |
| Cow position: | chr28:23892249-23892103 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 29 |
| Conread position: | 206-349 |
| Cow position: | chr28:7856694-7856551 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 206-349 |
| Cow position: | chr28:10068142-10068004 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 218-347 |
| Cow position: | chr28:30309536-30309412 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 225-349 |
| Cow position: | chr28:31298734-31298850 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 231-349 |
| Cow position: | chr28:4844166-4844279 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 38 |
| Conread position: | 238-357 |
| Cow position: | chr28:34402314-34402196 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 112, 31 |
| Conread position: | 272-349 |
| Cow position: | chr28:14066599-14066676 (view UCSC Genome Browser custom track) |
| Alignm length: | 78 |
| Alignm identity: | 71 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.