Cow genome map


           Conread name:
           Ss1.1-rret12_i15.5
        

               Conread position:
               155-348
               

               Cow position:
               chr29:31895745-31895946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               162-282
               

               Cow position:
               chr29:21799013-21798889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               162-349
               

               Cow position:
               chr29:16350006-16350193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               67, 111
               

               Conread position:
               162-398
               

               Cow position:
               chr29:43302372-43302136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 91
               

               Conread position:
               163-347
               

               Cow position:
               chr29:26658037-26658216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               163-349
               

               Cow position:
               chr29:41202190-41202374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               22, 18
               

               Conread position:
               226-349
               

               Cow position:
               chr29:13628000-13628120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               227-347
               

               Cow position:
               chr29:29998318-29998432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               228-349
               

               Cow position:
               chr29:12302762-12302880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               229-351
               

               Cow position:
               chr29:15976453-15976570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               40, 0
               
Show alignments to all cow chromosomes.