Cow genome map
| Conread name: | Ss1.1-rret12_i15.5 |
| Conread position: | 155-349 |
| Cow position: | chr6:49221690-49221494 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 68, 97 |
| Conread position: | 162-349 |
| Cow position: | chr6:138125-137933 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 36 |
| Conread position: | 162-349 |
| Cow position: | chr6:12925049-12924867 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 170, 77 |
| Conread position: | 162-349 |
| Cow position: | chr6:50979380-50979568 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 162-355 |
| Cow position: | chr6:53392242-53392435 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 125 |
| Conread position: | 163-350 |
| Cow position: | chr6:8140316-8140512 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 58, 143 |
| Conread position: | 164-349 |
| Cow position: | chr6:50875595-50875399 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 70, 29 |
| Conread position: | 166-348 |
| Cow position: | chr6:38274992-38275175 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 30, 107 |
| Conread position: | 169-319 |
| Cow position: | chr6:57498555-57498707 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 52 |
| Conread position: | 218-345 |
| Cow position: | chr6:35273817-35273938 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 223-349 |
| Cow position: | chr6:6520748-6520870 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 225-347 |
| Cow position: | chr6:60176709-60176828 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 48 |
| Conread position: | 225-349 |
| Cow position: | chr6:7126209-7126328 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 227-345 |
| Cow position: | chr6:1042434-1042554 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 89, 42 |
| Conread position: | 227-347 |
| Cow position: | chr6:50800021-50799904 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 42 |
| Conread position: | 227-349 |
| Cow position: | chr6:46660808-46660923 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 227-349 |
| Cow position: | chr6:49330512-49330631 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 227-349 |
| Cow position: | chr6:57368170-57368051 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 228-349 |
| Cow position: | chr6:9789460-9789576 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 29 |
| Conread position: | 228-349 |
| Cow position: | chr6:16752002-16752115 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 228-349 |
| Cow position: | chr6:46886159-46886041 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 239-349 |
| Cow position: | chr6:49349598-49349705 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
Show alignments to all cow chromosomes.