Cow genome map
| Conread name: | Ss1.1-rret12_i15.5 |
| Conread position: | 153-349 |
| Cow position: | chr9:26520916-26520719 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 5 |
| Conread position: | 162-345 |
| Cow position: | chr9:23866865-23867054 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 108 |
| Conread position: | 162-349 |
| Cow position: | chr9:10300889-10300698 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 35 |
| Conread position: | 162-349 |
| Cow position: | chr9:16488092-16488275 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 36 |
| Conread position: | 162-349 |
| Cow position: | chr9:38755810-38755629 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 162-349 |
| Cow position: | chr9:44688680-44688872 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 34, 43 |
| Conread position: | 162-350 |
| Cow position: | chr9:45375960-45376163 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 162-350 |
| Cow position: | chr9:48128809-48128618 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 20, 114 |
| Conread position: | 163-347 |
| Cow position: | chr9:45291944-45291755 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 57, 18 |
| Conread position: | 164-349 |
| Cow position: | chr9:24927671-24927859 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 12 |
| Conread position: | 165-349 |
| Cow position: | chr9:43482292-43482111 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 164, 11 |
| Conread position: | 169-349 |
| Cow position: | chr9:12851551-12851720 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 170-348 |
| Cow position: | chr9:34086021-34086201 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 72, 94 |
| Conread position: | 173-349 |
| Cow position: | chr9:51578076-51578248 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 30 |
| Conread position: | 214-349 |
| Cow position: | chr9:8040282-8040155 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 227-346 |
| Cow position: | chr9:55623927-55624040 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 227-347 |
| Cow position: | chr9:10734572-10734455 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 227-348 |
| Cow position: | chr9:59866216-59866098 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 227-349 |
| Cow position: | chr9:8633404-8633285 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 227-349 |
| Cow position: | chr9:18118982-18118863 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 227-349 |
| Cow position: | chr9:37256972-37257092 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 227-355 |
| Cow position: | chr9:52423081-52423207 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 123, 38 |
Show alignments to all cow chromosomes.