Cow genome map
| Conread name: | Ss1.1-rret12_i15.5 |
| Conread position: | 160-350 |
| Cow position: | chrX:10257412-10257219 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 69, 124 |
| Conread position: | 162-345 |
| Cow position: | chrX:13035838-13035659 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 162-349 |
| Cow position: | chrX:16885614-16885429 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 162-349 |
| Cow position: | chrX:16953890-16954064 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 162-349 |
| Cow position: | chrX:20875118-20875316 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 20, 122 |
| Conread position: | 162-349 |
| Cow position: | chrX:21621741-21621929 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 37, 92 |
| Conread position: | 162-349 |
| Cow position: | chrX:36067200-36067398 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 163-349 |
| Cow position: | chrX:2874410-2874226 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 163-349 |
| Cow position: | chrX:4199068-4198886 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 73, 18 |
| Conread position: | 163-349 |
| Cow position: | chrX:4265139-4264948 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 66, 127 |
| Conread position: | 199-349 |
| Cow position: | chrX:25789191-25789045 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 209-347 |
| Cow position: | chrX:40552406-40552274 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 222-346 |
| Cow position: | chrX:42129154-42129275 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 226-347 |
| Cow position: | chrX:2398293-2398169 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 227-349 |
| Cow position: | chrX:28809775-28809891 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 229-349 |
| Cow position: | chrX:6857312-6857195 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 229-349 |
| Cow position: | chrX:21823378-21823261 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 230-347 |
| Cow position: | chrX:14815040-14815151 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 230-348 |
| Cow position: | chrX:36752427-36752542 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.