Cow genome map

Conread name: Ss1.1-rret14_m21.5

Conread position: 1028-1276
Cow position:
Alignm length: 250
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 151

Conread position: 1031-1288
Cow position:
Alignm length: 259
Alignm identity: 172
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 176, 0

Conread position: 1048-1283
Cow position:
Alignm length: 239
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 144, 0

Conread position: 1051-1277
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 135, 0

Conread position: 1053-1285
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 9, 225

Conread position: 1060-1283
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 108

Conread position: 1061-1283
Cow position:
Alignm length: 230
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 16, 107

Conread position: 1061-1288
Cow position:
Alignm length: 229
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 135, 125

Conread position: 1061-1296
Cow position:
Alignm length: 250
Alignm identity: 168
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 114, 124

Conread position: 1063-1268
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 115

Conread position: 1063-1296
Cow position:
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 102

Conread position: 1066-1296
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 210, 112

Conread position: 1067-1248
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 1067-1266
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 125, 0

Conread position: 1067-1273
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 1067-1283
Cow position:
Alignm length: 220
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 100

Conread position: 1067-1284
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 208, 112

Conread position: 1067-1289
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 1067-1296
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 110, 0

Conread position: 1067-1296
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 70, 48

Conread position: 1067-1296
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 87, 107

Conread position: 1068-1265
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 113

Conread position: 1068-1273
Cow position:
Alignm length: 206
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 1068-1276
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 77, 12

Conread position: 1068-1276
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 114

Conread position: 1068-1277
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 5

Conread position: 1068-1277
Cow position:
Alignm length: 211
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 162

Conread position: 1068-1277
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 1068-1277
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 174, 110

Conread position: 1068-1278
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 86, 128

Conread position: 1068-1279
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 72, 0

Conread position: 1068-1280
Cow position:
Alignm length: 216
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 106, 98

Conread position: 1068-1282
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 85, 118

Conread position: 1068-1282
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 119, 27

Conread position: 1068-1282
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 86, 120

Conread position: 1068-1283
Cow position:
Alignm length: 221
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 125

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 9

Conread position: 1068-1283
Cow position:
Alignm length: 217
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 208, 98

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 106, 98

Conread position: 1068-1283
Cow position:
Alignm length: 219
Alignm identity: 148
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 118, 98

Conread position: 1068-1283
Cow position:
Alignm length: 219
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 110

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 106, 98

Conread position: 1068-1286
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 175

Conread position: 1068-1288
Cow position:
Alignm length: 228
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 5

Conread position: 1068-1288
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 208, 97

Conread position: 1068-1288
Cow position:
Alignm length: 225
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 97

Conread position: 1068-1288
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 195, 29

Conread position: 1068-1288
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 1068-1288
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 118, 0

Conread position: 1068-1288
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 102, 44

Conread position: 1068-1289
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 211, 32

Conread position: 1068-1289
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 140, 106

Conread position: 1068-1289
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 126, 197

Conread position: 1068-1292
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 132, 118

Conread position: 1068-1295
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 101

Conread position: 1068-1295
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 118, 0

Conread position: 1068-1296
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 1068-1296
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 150, 62

Conread position: 1068-1296
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 194, 110

Conread position: 1068-1296
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 120, 94

Conread position: 1069-1211
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 1069-1268
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 105, 48

Conread position: 1069-1272
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 201, 51

Conread position: 1069-1277
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 124

Conread position: 1069-1277
Cow position:
Alignm length: 209
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 1069-1283
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 46

Conread position: 1069-1283
Cow position:
Alignm length: 222
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 86, 93

Conread position: 1069-1283
Cow position:
Alignm length: 216
Alignm identity: 146
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 207, 91

Conread position: 1069-1286
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 26, 98

Conread position: 1069-1288
Cow position:
Alignm length: 224
Alignm identity: 148
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 1069-1288
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 142, 110

Conread position: 1069-1296
Cow position:
Alignm length: 234
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 1070-1274
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 112, 0

Conread position: 1070-1278
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 1070-1284
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 108, 0

Conread position: 1070-1285
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 199, 108

Conread position: 1070-1288
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 104, 95

Conread position: 1070-1288
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 50, 111

Conread position: 1070-1295
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 165, 108

Conread position: 1070-1296
Cow position:
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 1071-1210
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 1071-1283
Cow position:
Alignm length: 217
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 97

Conread position: 1071-1288
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 123, 49

Conread position: 1074-1296
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 122, 38

Conread position: 1075-1273
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 103

Conread position: 1075-1296
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1079-1254
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 69, 44

Conread position: 1079-1296
Cow position:
Alignm length: 218
Alignm identity: 143
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 1080-1273
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 106, 20

Conread position: 1080-1277
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 98, 0

Conread position: 1080-1283
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 1080-1288
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 195, 39

Conread position: 1080-1294
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 106

Conread position: 1082-1283
Cow position:
Alignm length: 205
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 85

Conread position: 1082-1284
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 99, 12

Conread position: 1083-1288
Cow position:
Alignm length: 210
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 1083-1289
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 197, 105

Conread position: 1083-1296
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 185, 111

Conread position: 1083-1296
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 75, 70

Conread position: 1084-1277
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1084-1283
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 92, 88

Conread position: 1084-1283
Cow position:
Alignm length: 201
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 187

Conread position: 1084-1285
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 1084-1295
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 23, 212

Conread position: 1084-1296
Cow position:
Alignm length: 217
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 53

Conread position: 1085-1264
Cow position:
Alignm length: 182
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 1085-1281
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 71, 142

Conread position: 1085-1282
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 1085-1282
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 96

Conread position: 1085-1283
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 119, 35

Conread position: 1085-1283
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 1085-1285
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 1085-1296
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 74

Conread position: 1088-1296
Cow position:
Alignm length: 213
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 76

Conread position: 1090-1268
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 1090-1296
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 1091-1286
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 1093-1288
Cow position:
Alignm length: 199
Alignm identity: 135
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 1096-1291
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 98, 16

Conread position: 1096-1296
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 187, 84

Conread position: 1099-1277
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 1099-1288
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 1099-1295
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 1099-1295
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 1099-1296
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 176, 66

Conread position: 1103-1293
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 44

Conread position: 1103-1295
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 91, 189

Conread position: 1107-1273
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 1108-1288
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 22

Conread position: 1109-1295
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 19, 72

Conread position: 1110-1283
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 56

Conread position: 1111-1295
Cow position:
Alignm length: 186
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 58, 53

Conread position: 1117-1295
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 84, 13

Conread position: 1119-1294
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 55, 152

Conread position: 1123-1283
Cow position:
Alignm length: 161
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1126-1296
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 1133-1296
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 32

Conread position: 1134-1283
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 1140-1282
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 1144-1292
Cow position:
Alignm length: 149
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.