Cow genome map

Conread name: Ss1.1-rret14_m21.5

Conread position: 1061-1288
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 108, 46

Conread position: 1061-1296
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 95, 121

Conread position: 1062-1278
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 34, 117

Conread position: 1063-1283
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 93, 10

Conread position: 1067-1264
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 154, 111

Conread position: 1067-1272
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 1067-1279
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 205, 111

Conread position: 1067-1281
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 46, 0

Conread position: 1067-1294
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 1067-1294
Cow position:
Alignm length: 234
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 218

Conread position: 1067-1295
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 86, 121

Conread position: 1068-1202
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 1068-1237
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 1068-1268
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 119

Conread position: 1068-1275
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 175, 96

Conread position: 1068-1277
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1277
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 122, 56

Conread position: 1068-1278
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 7

Conread position: 1068-1279
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1281
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 106, 93

Conread position: 1068-1281
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 200, 110

Conread position: 1068-1282
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 101, 18

Conread position: 1068-1282
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 1068-1282
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 200, 43

Conread position: 1068-1283
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 1068-1283
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1283
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 199

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 57, 114

Conread position: 1068-1283
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 118, 0

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 114, 99

Conread position: 1068-1283
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 106

Conread position: 1068-1286
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 189, 107

Conread position: 1068-1288
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 58

Conread position: 1068-1288
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 48

Conread position: 1068-1288
Cow position:
Alignm length: 225
Alignm identity: 150
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 115

Conread position: 1068-1288
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 112

Conread position: 1068-1288
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 59, 125

Conread position: 1068-1288
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 201, 110

Conread position: 1068-1288
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 121, 90

Conread position: 1068-1288
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 97

Conread position: 1068-1288
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 119

Conread position: 1068-1289
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 39

Conread position: 1068-1289
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 75

Conread position: 1068-1293
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 105, 60

Conread position: 1068-1294
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 211, 47

Conread position: 1068-1296
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 124, 110

Conread position: 1068-1296
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 120, 0

Conread position: 1068-1296
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 207, 110

Conread position: 1068-1296
Cow position:
Alignm length: 235
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 5

Conread position: 1068-1296
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 109, 91

Conread position: 1068-1296
Cow position:
Alignm length: 233
Alignm identity: 159
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 106, 98

Conread position: 1068-1296
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 28

Conread position: 1068-1296
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 136, 93

Conread position: 1069-1268
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1069-1273
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 7, 110

Conread position: 1069-1275
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 48

Conread position: 1069-1275
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 117, 0

Conread position: 1069-1276
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 105, 116

Conread position: 1069-1278
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 100, 95

Conread position: 1069-1278
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 174, 79

Conread position: 1069-1283
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 0

Conread position: 1069-1283
Cow position:
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 1069-1283
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 1069-1293
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 127

Conread position: 1069-1294
Cow position:
Alignm length: 230
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 68, 130

Conread position: 1069-1295
Cow position:
Alignm length: 227
Alignm identity: 167
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 48, 0

Conread position: 1069-1296
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 109, 0

Conread position: 1070-1237
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 46

Conread position: 1070-1277
Cow position:
Alignm length: 211
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 106, 85

Conread position: 1070-1281
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 72, 0

Conread position: 1070-1283
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 129, 109

Conread position: 1072-1250
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 1072-1268
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 7, 113

Conread position: 1075-1296
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 98, 104

Conread position: 1080-1282
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 50, 87

Conread position: 1080-1282
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 1080-1289
Cow position:
Alignm length: 211
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 89, 79

Conread position: 1080-1294
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 1080-1295
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 126, 85

Conread position: 1080-1295
Cow position:
Alignm length: 216
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 1082-1283
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 99, 84

Conread position: 1082-1283
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 116, 17

Conread position: 1082-1287
Cow position:
Alignm length: 208
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 92

Conread position: 1082-1293
Cow position:
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 90

Conread position: 1082-1295
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 148, 96

Conread position: 1083-1278
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 0

Conread position: 1083-1283
Cow position:
Alignm length: 202
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 82

Conread position: 1083-1283
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 113, 88

Conread position: 1083-1288
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 113

Conread position: 1083-1293
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 72, 92

Conread position: 1083-1296
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 112, 214

Conread position: 1083-1296
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 1084-1277
Cow position:
Alignm length: 194
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 1084-1290
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 114, 39

Conread position: 1084-1296
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 97, 83

Conread position: 1085-1284
Cow position:
Alignm length: 201
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 67

Conread position: 1085-1295
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 1086-1293
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 193, 54

Conread position: 1087-1288
Cow position:
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 1088-1277
Cow position:
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1089-1283
Cow position:
Alignm length: 197
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 75

Conread position: 1096-1283
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 71

Conread position: 1096-1296
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 1099-1288
Cow position:
Alignm length: 192
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 1099-1295
Cow position:
Alignm length: 202
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 1100-1288
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 17

Conread position: 1101-1295
Cow position:
Alignm length: 195
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1102-1283
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 73, 91

Conread position: 1104-1276
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 1108-1289
Cow position:
Alignm length: 182
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 1117-1289
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 1120-1272
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 1123-1284
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 1123-1288
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 146, 63

Conread position: 1195-1293
Cow position:
Alignm length: 99
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.