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Cow genome map

           
Conread name:
           
Ss1.1-rret14_m21.5
        

               
Conread position:
               
1051-1289
               

               
Cow position:
               
chr22:7362006-7361767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
172, 98
               

               
Conread position:
               
1052-1277
               

               
Cow position:
               
chr22:23780597-23780377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
1052-1283
               

               
Cow position:
               
chr22:15024680-15024913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 11
               

               
Conread position:
               
1054-1289
               

               
Cow position:
               
chr22:24890195-24890428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
1060-1275
               

               
Cow position:
               
chr22:6202927-6203145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 105
               

               
Conread position:
               
1062-1276
               

               
Cow position:
               
chr22:11189014-11189225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
1066-1295
               

               
Cow position:
               
chr22:243099-243315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1067-1241
               

               
Cow position:
               
chr22:4119575-4119403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
1067-1265
               

               
Cow position:
               
chr22:10631373-10631572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
77, 151
               

               
Conread position:
               
1067-1269
               

               
Cow position:
               
chr22:10532487-10532681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
112, 97
               

               
Conread position:
               
1067-1278
               

               
Cow position:
               
chr22:18021045-18020834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 74
               

               
Conread position:
               
1067-1278
               

               
Cow position:
               
chr22:43131571-43131357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
131, 98
               

               
Conread position:
               
1067-1280
               

               
Cow position:
               
chr22:43237421-43237200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
1067-1283
               

               
Cow position:
               
chr22:12315798-12316010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
202, 73
               

               
Conread position:
               
1067-1284
               

               
Cow position:
               
chr22:1983835-1984060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1067-1286
               

               
Cow position:
               
chr22:44717703-44717923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
1067-1288
               

               
Cow position:
               
chr22:2470253-2470030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
114, 81
               

               
Conread position:
               
1067-1288
               

               
Cow position:
               
chr22:17152664-17152895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1067-1289
               

               
Cow position:
               
chr22:2109639-2109422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
1067-1289
               

               
Cow position:
               
chr22:27171279-27171063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
1067-1294
               

               
Cow position:
               
chr22:8446902-8447119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
1067-1296
               

               
Cow position:
               
chr22:24134336-24134108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
125, 48
               

               
Conread position:
               
1067-1296
               

               
Cow position:
               
chr22:27825827-27826065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 99
               

               
Conread position:
               
1068-1208
               

               
Cow position:
               
chr22:30253188-30253329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
1068-1210
               

               
Cow position:
               
chr22:31510392-31510250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 120
               

               
Conread position:
               
1068-1240
               

               
Cow position:
               
chr22:9171396-9171566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1068-1261
               

               
Cow position:
               
chr22:28146664-28146862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
1068-1266
               

               
Cow position:
               
chr22:31646480-31646669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
195, 110
               

               
Conread position:
               
1068-1273
               

               
Cow position:
               
chr22:19827875-19827669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
123, 112
               

               
Conread position:
               
1068-1275
               

               
Cow position:
               
chr22:34441645-34441439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 115
               

               
Conread position:
               
1068-1276
               

               
Cow position:
               
chr22:12902859-12902661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1068-1276
               

               
Cow position:
               
chr22:18838240-18838445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
1068-1277
               

               
Cow position:
               
chr22:4563350-4563552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 112
               

               
Conread position:
               
1068-1277
               

               
Cow position:
               
chr22:6215568-6215361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1068-1277
               

               
Cow position:
               
chr22:10295027-10295224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1068-1277
               

               
Cow position:
               
chr22:43397990-43398195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1068-1278
               

               
Cow position:
               
chr22:38439169-38438961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
134, 118
               

               
Conread position:
               
1068-1279
               

               
Cow position:
               
chr22:25742961-25742768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1068-1281
               

               
Cow position:
               
chr22:16094915-16094706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
1068-1281
               

               
Cow position:
               
chr22:41982730-41982520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
126, 49
               

               
Conread position:
               
1068-1283
               

               
Cow position:
               
chr22:9668564-9668782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
113, 99
               

               
Conread position:
               
1068-1283
               

               
Cow position:
               
chr22:11813735-11813522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
97, 116
               

               
Conread position:
               
1068-1283
               

               
Cow position:
               
chr22:23249741-23249535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
1068-1283
               

               
Cow position:
               
chr22:38313489-38313271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
13, 5
               

               
Conread position:
               
1068-1283
               

               
Cow position:
               
chr22:43977572-43977359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
208, 61
               

               
Conread position:
               
1068-1284
               

               
Cow position:
               
chr22:41898459-41898244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
1068-1286
               

               
Cow position:
               
chr22:16813786-16813999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1068-1287
               

               
Cow position:
               
chr22:5616290-5616501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1068-1287
               

               
Cow position:
               
chr22:10557268-10557476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1068-1287
               

               
Cow position:
               
chr22:18099607-18099827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
1068-1287
               

               
Cow position:
               
chr22:30818201-30818415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1068-1288
               

               
Cow position:
               
chr22:1865767-1865990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
113, 102
               

               
Conread position:
               
1068-1288
               

               
Cow position:
               
chr22:4060959-4060741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1068-1288
               

               
Cow position:
               
chr22:12803397-12803181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1068-1288
               

               
Cow position:
               
chr22:40789554-40789762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1068-1288
               

               
Cow position:
               
chr22:41971166-41970952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1068-1289
               

               
Cow position:
               
chr22:22613094-22613313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
212, 103
               

               
Conread position:
               
1068-1289
               

               
Cow position:
               
chr22:28370934-28371140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
201, 38
               

               
Conread position:
               
1068-1290
               

               
Cow position:
               
chr22:1776047-1776272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
93, 112
               

               
Conread position:
               
1068-1290
               

               
Cow position:
               
chr22:19460058-19459834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
118, 98
               

               
Conread position:
               
1068-1291
               

               
Cow position:
               
chr22:6176297-6176073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
1068-1291
               

               
Cow position:
               
chr22:13957656-13957435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
1068-1291
               

               
Cow position:
               
chr22:37201837-37202061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
136, 97
               

               
Conread position:
               
1068-1294
               

               
Cow position:
               
chr22:1659152-1659380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
107, 182
               

               
Conread position:
               
1068-1295
               

               
Cow position:
               
chr22:285372-285151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
208, 24
               

               
Conread position:
               
1068-1295
               

               
Cow position:
               
chr22:4163967-4164197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
1068-1295
               

               
Cow position:
               
chr22:17193380-17193608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
118, 62
               

               
Conread position:
               
1068-1295
               

               
Cow position:
               
chr22:36432982-36432760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
141, 47
               

               
Conread position:
               
1068-1296
               

               
Cow position:
               
chr22:4108742-4108510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
118, 98
               

               
Conread position:
               
1068-1296
               

               
Cow position:
               
chr22:9372509-9372742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
97, 230
               

               
Conread position:
               
1068-1296
               

               
Cow position:
               
chr22:14487923-14488154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 107
               

               
Conread position:
               
1068-1296
               

               
Cow position:
               
chr22:21526908-21527124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
211, 56
               

               
Conread position:
               
1068-1296
               

               
Cow position:
               
chr22:23265664-23265433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
105, 91
               

               
Conread position:
               
1068-1296
               

               
Cow position:
               
chr22:30998874-30999105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1069-1273
               

               
Cow position:
               
chr22:12892377-12892169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1069-1275
               

               
Cow position:
               
chr22:25221907-25221709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
1069-1279
               

               
Cow position:
               
chr22:16533063-16533270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 86
               

               
Conread position:
               
1069-1279
               

               
Cow position:
               
chr22:25809287-25809083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1069-1281
               

               
Cow position:
               
chr22:8324228-8324448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1069-1283
               

               
Cow position:
               
chr22:4657054-4656844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
100, 95
               

               
Conread position:
               
1069-1283
               

               
Cow position:
               
chr22:15568027-15567819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
200, 109
               

               
Conread position:
               
1069-1283
               

               
Cow position:
               
chr22:40349332-40349544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
1069-1283
               

               
Cow position:
               
chr22:42130162-42130377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
48, 103
               

               
Conread position:
               
1069-1286
               

               
Cow position:
               
chr22:33948984-33948772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
1069-1288
               

               
Cow position:
               
chr22:27275451-27275674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
129, 96
               

               
Conread position:
               
1069-1291
               

               
Cow position:
               
chr22:16541663-16541440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
130, 95
               

               
Conread position:
               
1069-1295
               

               
Cow position:
               
chr22:12157856-12157634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 110
               

               
Conread position:
               
1069-1295
               

               
Cow position:
               
chr22:17652424-17652647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
207, 117
               

               
Conread position:
               
1069-1296
               

               
Cow position:
               
chr22:6721089-6720867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1069-1296
               

               
Cow position:
               
chr22:10161956-10162184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
217, 161
               

               
Conread position:
               
1069-1296
               

               
Cow position:
               
chr22:14545936-14545707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
112, 98
               

               
Conread position:
               
1069-1296
               

               
Cow position:
               
chr22:23115319-23115093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 165
               

               
Conread position:
               
1069-1296
               

               
Cow position:
               
chr22:30606845-30607074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
107, 95
               

               
Conread position:
               
1070-1234
               

               
Cow position:
               
chr22:4315620-4315787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
139, 47
               

               
Conread position:
               
1070-1273
               

               
Cow position:
               
chr22:14141352-14141149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1070-1277
               

               
Cow position:
               
chr22:4357083-4357279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1070-1281
               

               
Cow position:
               
chr22:42617990-42618195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1070-1283
               

               
Cow position:
               
chr22:8138275-8138053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1070-1283
               

               
Cow position:
               
chr22:11613414-11613628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
1070-1283
               

               
Cow position:
               
chr22:12981731-12981523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
136, 45
               

               
Conread position:
               
1070-1283
               

               
Cow position:
               
chr22:17852644-17852436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1070-1288
               

               
Cow position:
               
chr22:14214376-14214160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
177, 109
               

               
Conread position:
               
1070-1288
               

               
Cow position:
               
chr22:44741066-44741277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1070-1289
               

               
Cow position:
               
chr22:17949982-17949768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
173, 112
               

               
Conread position:
               
1070-1292
               

               
Cow position:
               
chr22:1065095-1065319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
1070-1296
               

               
Cow position:
               
chr22:3251004-3250765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1072-1288
               

               
Cow position:
               
chr22:8327738-8327946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
156, 68
               

               
Conread position:
               
1072-1296
               

               
Cow position:
               
chr22:7882547-7882770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
191, 43
               

               
Conread position:
               
1073-1285
               

               
Cow position:
               
chr22:26233625-26233837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 130
               

               
Conread position:
               
1073-1289
               

               
Cow position:
               
chr22:2100953-2100742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1074-1275
               

               
Cow position:
               
chr22:6360190-6359999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1074-1280
               

               
Cow position:
               
chr22:18259216-18259416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
195, 41
               

               
Conread position:
               
1075-1259
               

               
Cow position:
               
chr22:15068422-15068607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
92, 120
               

               
Conread position:
               
1075-1283
               

               
Cow position:
               
chr22:4628548-4628764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1075-1286
               

               
Cow position:
               
chr22:21905466-21905673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
157, 103
               

               
Conread position:
               
1078-1283
               

               
Cow position:
               
chr22:2632844-2633051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 88
               

               
Conread position:
               
1078-1283
               

               
Cow position:
               
chr22:7584238-7584041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1078-1283
               

               
Cow position:
               
chr22:39215617-39215410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
121, 94
               

               
Conread position:
               
1079-1288
               

               
Cow position:
               
chr22:7497109-7496900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 9
               

               
Conread position:
               
1079-1296
               

               
Cow position:
               
chr22:45012754-45012546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
198, 36
               

               
Conread position:
               
1080-1277
               

               
Cow position:
               
chr22:33985800-33985611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
149, 35
               

               
Conread position:
               
1080-1282
               

               
Cow position:
               
chr22:10567714-10567517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
189, 106
               

               
Conread position:
               
1080-1295
               

               
Cow position:
               
chr22:33485616-33485408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
199, 35
               

               
Conread position:
               
1080-1296
               

               
Cow position:
               
chr22:12188481-12188260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
114, 206
               

               
Conread position:
               
1080-1296
               

               
Cow position:
               
chr22:12195568-12195346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
114, 207
               

               
Conread position:
               
1080-1296
               

               
Cow position:
               
chr22:26188870-26189087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
110, 99
               

               
Conread position:
               
1081-1280
               

               
Cow position:
               
chr22:2550939-2550736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
1082-1283
               

               
Cow position:
               
chr22:2123294-2123493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
194, 85
               

               
Conread position:
               
1082-1283
               

               
Cow position:
               
chr22:16273642-16273844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 111
               

               
Conread position:
               
1082-1283
               

               
Cow position:
               
chr22:35403710-35403914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 104
               

               
Conread position:
               
1082-1285
               

               
Cow position:
               
chr22:8429889-8430095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 85
               

               
Conread position:
               
1082-1296
               

               
Cow position:
               
chr22:14091221-14091002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 85
               

               
Conread position:
               
1082-1296
               

               
Cow position:
               
chr22:37066800-37066589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
189, 88
               

               
Conread position:
               
1083-1275
               

               
Cow position:
               
chr22:1588297-1588489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1083-1283
               

               
Cow position:
               
chr22:26417286-26417482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
1083-1283
               

               
Cow position:
               
chr22:39602285-39602488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1083-1285
               

               
Cow position:
               
chr22:2876795-2876592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 92
               

               
Conread position:
               
1083-1285
               

               
Cow position:
               
chr22:12929277-12929074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
1083-1287
               

               
Cow position:
               
chr22:6106373-6106164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
104, 90
               

               
Conread position:
               
1083-1287
               

               
Cow position:
               
chr22:22013753-22013954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1083-1288
               

               
Cow position:
               
chr22:1484866-1485076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
91, 83
               

               
Conread position:
               
1083-1288
               

               
Cow position:
               
chr22:5375397-5375602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 81
               

               
Conread position:
               
1083-1288
               

               
Cow position:
               
chr22:6754264-6754056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1083-1288
               

               
Cow position:
               
chr22:23630348-23630147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
193, 57
               

               
Conread position:
               
1083-1288
               

               
Cow position:
               
chr22:33448078-33447872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
125, 199
               

               
Conread position:
               
1083-1289
               

               
Cow position:
               
chr22:4736026-4736235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
1083-1293
               

               
Cow position:
               
chr22:35578774-35578564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
118, 81
               

               
Conread position:
               
1084-1266
               

               
Cow position:
               
chr22:12389103-12389287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
72, 98
               

               
Conread position:
               
1084-1276
               

               
Cow position:
               
chr22:12829608-12829414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
1084-1277
               

               
Cow position:
               
chr22:6289499-6289303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 104
               

               
Conread position:
               
1084-1277
               

               
Cow position:
               
chr22:11130874-11131065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1084-1283
               

               
Cow position:
               
chr22:2704302-2704502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
129, 87
               

               
Conread position:
               
1084-1288
               

               
Cow position:
               
chr22:4075883-4075677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
1085-1276
               

               
Cow position:
               
chr22:2184707-2184521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1085-1277
               

               
Cow position:
               
chr22:33030803-33031005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr22:6709786-6709583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
111, 94
               

               
Conread position:
               
1085-1288
               

               
Cow position:
               
chr22:24903594-24903798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
49, 97
               

               
Conread position:
               
1085-1295
               

               
Cow position:
               
chr22:2403887-2404093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
1085-1295
               

               
Cow position:
               
chr22:28071564-28071772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 55
               

               
Conread position:
               
1085-1296
               

               
Cow position:
               
chr22:7518560-7518770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
206, 103
               

               
Conread position:
               
1085-1296
               

               
Cow position:
               
chr22:12678417-12678204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
201, 0
               

               
Conread position:
               
1086-1268
               

               
Cow position:
               
chr22:28493273-28493094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
1086-1279
               

               
Cow position:
               
chr22:28357035-28357225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
1086-1283
               

               
Cow position:
               
chr22:39472152-39471952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
1086-1283
               

               
Cow position:
               
chr22:40048563-40048760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
1086-1288
               

               
Cow position:
               
chr22:39508034-39507832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
183, 76
               

               
Conread position:
               
1086-1295
               

               
Cow position:
               
chr22:26056859-26056652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
182, 102
               

               
Conread position:
               
1087-1286
               

               
Cow position:
               
chr22:45684032-45683829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 144
               

               
Conread position:
               
1088-1279
               

               
Cow position:
               
chr22:8412536-8412728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
99, 90
               

               
Conread position:
               
1089-1288
               

               
Cow position:
               
chr22:1289519-1289323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1090-1278
               

               
Cow position:
               
chr22:33399479-33399292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
85, 95
               

               
Conread position:
               
1093-1268
               

               
Cow position:
               
chr22:530566-530391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 86
               

               
Conread position:
               
1093-1283
               

               
Cow position:
               
chr22:8570920-8571122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1093-1283
               

               
Cow position:
               
chr22:10350973-10351168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1093-1283
               

               
Cow position:
               
chr22:15490667-15490857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1093-1289
               

               
Cow position:
               
chr22:29949890-29950092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
79, 72
               

               
Conread position:
               
1095-1277
               

               
Cow position:
               
chr22:36193848-36194027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1095-1278
               

               
Cow position:
               
chr22:9735284-9735465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1096-1277
               

               
Cow position:
               
chr22:13951279-13951458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
120, 83
               

               
Conread position:
               
1096-1295
               

               
Cow position:
               
chr22:8883027-8883226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
180, 63
               

               
Conread position:
               
1098-1287
               

               
Cow position:
               
chr22:17745831-17746026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1099-1282
               

               
Cow position:
               
chr22:39493817-39493631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
1099-1296
               

               
Cow position:
               
chr22:3937079-3937277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
1100-1267
               

               
Cow position:
               
chr22:10936831-10936663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
74, 150
               

               
Conread position:
               
1100-1288
               

               
Cow position:
               
chr22:15950363-15950182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
180, 15
               

               
Conread position:
               
1101-1281
               

               
Cow position:
               
chr22:1304532-1304355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1103-1277
               

               
Cow position:
               
chr22:2201763-2201930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1104-1262
               

               
Cow position:
               
chr22:16655714-16655559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1104-1278
               

               
Cow position:
               
chr22:12741248-12741085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
165, 74
               

               
Conread position:
               
1106-1292
               

               
Cow position:
               
chr22:8357612-8357789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1107-1290
               

               
Cow position:
               
chr22:1074291-1074476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1108-1281
               

               
Cow position:
               
chr22:13891608-13891775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1108-1288
               

               
Cow position:
               
chr22:3430220-3430404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1109-1277
               

               
Cow position:
               
chr22:10594637-10594806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1109-1282
               

               
Cow position:
               
chr22:12207677-12207505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
170, 77
               

               
Conread position:
               
1117-1264
               

               
Cow position:
               
chr22:33566057-33565912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1117-1278
               

               
Cow position:
               
chr22:5595774-5595611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1117-1288
               

               
Cow position:
               
chr22:3257625-3257460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1117-1288
               

               
Cow position:
               
chr22:12573241-12573412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
1117-1288
               

               
Cow position:
               
chr22:30684765-30684932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
158, 61
               

               
Conread position:
               
1117-1294
               

               
Cow position:
               
chr22:11790020-11790199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1117-1295
               

               
Cow position:
               
chr22:1105587-1105415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1117-1295
               

               
Cow position:
               
chr22:26786398-26786571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1117-1296
               

               
Cow position:
               
chr22:5779046-5778869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
1122-1268
               

               
Cow position:
               
chr22:18145578-18145722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1132-1288
               

               
Cow position:
               
chr22:29546691-29546843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1169-1296
               

               
Cow position:
               
chr22:20945475-20945607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               
Show alignments to all cow chromosomes.