Cow genome map

Conread name: Ss1.1-rret14_m21.5

Conread position: 1007-1269
Cow position:
Alignm length: 267
Alignm identity: 177
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 31

Conread position: 1013-1282
Cow position:
Alignm length: 275
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 156

Conread position: 1051-1278
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 32

Conread position: 1055-1242
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 1067-1280
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 36

Conread position: 1067-1281
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 1067-1281
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 196, 35

Conread position: 1067-1283
Cow position:
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 101

Conread position: 1068-1210
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1068-1265
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 1068-1265
Cow position:
Alignm length: 200
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 120, 98

Conread position: 1068-1265
Cow position:
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 111, 29

Conread position: 1068-1267
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1276
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 128, 119

Conread position: 1068-1276
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1277
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1278
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 108, 97

Conread position: 1068-1278
Cow position:
Alignm length: 212
Alignm identity: 163
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 127, 0

Conread position: 1068-1278
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 182, 44

Conread position: 1068-1278
Cow position:
Alignm length: 212
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 44

Conread position: 1068-1279
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 201, 110

Conread position: 1068-1279
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 1068-1279
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 135, 0

Conread position: 1068-1279
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 1068-1280
Cow position:
Alignm length: 213
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 1068-1282
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 201, 132

Conread position: 1068-1283
Cow position:
Alignm length: 217
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 92

Conread position: 1068-1283
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 104

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 114, 18

Conread position: 1068-1283
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 95, 119

Conread position: 1068-1283
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 157, 43

Conread position: 1068-1283
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 5

Conread position: 1068-1283
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 1068-1285
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 106, 0

Conread position: 1068-1286
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 214

Conread position: 1068-1287
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 1068-1288
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 118, 0

Conread position: 1068-1288
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 111, 0

Conread position: 1068-1288
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 97

Conread position: 1068-1288
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1291
Cow position:
Alignm length: 224
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 1068-1294
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 201, 105

Conread position: 1068-1295
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 110

Conread position: 1068-1295
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 212, 103

Conread position: 1068-1295
Cow position:
Alignm length: 234
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 98

Conread position: 1068-1295
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1295
Cow position:
Alignm length: 233
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 98

Conread position: 1068-1296
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 130, 96

Conread position: 1068-1296
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 124, 0

Conread position: 1068-1296
Cow position:
Alignm length: 229
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1296
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 145, 98

Conread position: 1068-1296
Cow position:
Alignm length: 234
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 118

Conread position: 1069-1232
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 147, 0

Conread position: 1069-1273
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 131, 25

Conread position: 1069-1275
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 7, 49

Conread position: 1069-1279
Cow position:
Alignm length: 211
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 1069-1281
Cow position:
Alignm length: 215
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 0

Conread position: 1069-1282
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 1069-1283
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 7, 97

Conread position: 1069-1283
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 1069-1284
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1069-1288
Cow position:
Alignm length: 225
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 1069-1294
Cow position:
Alignm length: 227
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 55, 46

Conread position: 1069-1295
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 123, 178

Conread position: 1069-1296
Cow position:
Alignm length: 231
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 123, 71

Conread position: 1069-1296
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 195, 38

Conread position: 1069-1296
Cow position:
Alignm length: 235
Alignm identity: 173
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 7, 61

Conread position: 1070-1275
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 1070-1278
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 125, 68

Conread position: 1070-1278
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 135, 0

Conread position: 1070-1281
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 1070-1288
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 1070-1288
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 209, 45

Conread position: 1070-1295
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 1070-1296
Cow position:
Alignm length: 227
Alignm identity: 170
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 118, 0

Conread position: 1071-1265
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 1071-1278
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 139, 10

Conread position: 1071-1280
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 110, 96

Conread position: 1071-1285
Cow position:
Alignm length: 219
Alignm identity: 148
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 110, 96

Conread position: 1073-1290
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 196, 105

Conread position: 1073-1296
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 1075-1268
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 100, 60

Conread position: 1075-1283
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 168, 32

Conread position: 1075-1285
Cow position:
Alignm length: 212
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 114

Conread position: 1075-1290
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 1076-1282
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 1078-1287
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 1079-1278
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 95, 0

Conread position: 1079-1288
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 1080-1279
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 34

Conread position: 1080-1285
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 147, 45

Conread position: 1080-1294
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 100

Conread position: 1080-1295
Cow position:
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 1082-1281
Cow position:
Alignm length: 200
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 1082-1282
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 1082-1283
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 92, 84

Conread position: 1082-1295
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 91, 83

Conread position: 1082-1296
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 117

Conread position: 1082-1296
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 84

Conread position: 1083-1278
Cow position:
Alignm length: 198
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 59

Conread position: 1083-1288
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 137, 96

Conread position: 1083-1296
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 116, 88

Conread position: 1083-1296
Cow position:
Alignm length: 215
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 193, 84

Conread position: 1084-1277
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 28

Conread position: 1084-1282
Cow position:
Alignm length: 201
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 98

Conread position: 1084-1288
Cow position:
Alignm length: 205
Alignm identity: 161
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 95, 0

Conread position: 1084-1288
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 78

Conread position: 1084-1291
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 1085-1277
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 98

Conread position: 1085-1283
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 96, 82

Conread position: 1086-1281
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 82

Conread position: 1086-1287
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 189, 29

Conread position: 1086-1296
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 47

Conread position: 1087-1278
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1087-1283
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 1088-1278
Cow position:
Alignm length: 191
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 1088-1288
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 1088-1296
Cow position:
Alignm length: 215
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 105, 76

Conread position: 1089-1281
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 1089-1287
Cow position:
Alignm length: 200
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 82, 90

Conread position: 1091-1277
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 89

Conread position: 1092-1296
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 1093-1276
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 72

Conread position: 1093-1282
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 157, 40

Conread position: 1093-1288
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 181, 95

Conread position: 1097-1276
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 1099-1282
Cow position:
Alignm length: 184
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 1099-1284
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 75

Conread position: 1099-1294
Cow position:
Alignm length: 199
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 169, 18

Conread position: 1099-1295
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 174, 80

Conread position: 1099-1295
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 99, 66

Conread position: 1102-1287
Cow position:
Alignm length: 186
Alignm identity: 129
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 1103-1284
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 71, 12

Conread position: 1105-1287
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 70, 18

Conread position: 1107-1295
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 69

Conread position: 1109-1295
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 72

Conread position: 1117-1273
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 62

Conread position: 1117-1283
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 1117-1288
Cow position:
Alignm length: 172
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1188-1295
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Show alignments to all cow chromosomes.