Cow genome map

Conread name: Ss1.1-rret14_m21.5

Conread position: 1061-1294
Cow position:
Alignm length: 239
Alignm identity: 161
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 112, 164

Conread position: 1063-1296
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 14, 54

Conread position: 1066-1278
Cow position:
Alignm length: 215
Alignm identity: 144
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 114

Conread position: 1067-1277
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 1067-1279
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 88, 94

Conread position: 1067-1281
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 112, 0

Conread position: 1067-1282
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 212, 111

Conread position: 1067-1283
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 1067-1283
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 108, 56

Conread position: 1067-1286
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 90, 0

Conread position: 1067-1288
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 129, 69

Conread position: 1067-1292
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 1067-1295
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 111, 0

Conread position: 1067-1296
Cow position:
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 135, 58

Conread position: 1068-1206
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1209
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 1068-1241
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 1068-1266
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 1068-1275
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 42, 66

Conread position: 1068-1277
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 1068-1278
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 130, 23

Conread position: 1068-1278
Cow position:
Alignm length: 213
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 118, 92

Conread position: 1068-1279
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 1068-1280
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 1068-1280
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 143, 0

Conread position: 1068-1282
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 124, 27

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 148
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 106, 98

Conread position: 1068-1283
Cow position:
Alignm length: 218
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 121, 0

Conread position: 1068-1283
Cow position:
Alignm length: 218
Alignm identity: 149
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 66, 5

Conread position: 1068-1283
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 86, 128

Conread position: 1068-1283
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 146
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 118, 98

Conread position: 1068-1283
Cow position:
Alignm length: 219
Alignm identity: 146
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 113, 99

Conread position: 1068-1283
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 106, 31

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 126, 47

Conread position: 1068-1283
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 94, 65

Conread position: 1068-1283
Cow position:
Alignm length: 218
Alignm identity: 144
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 126, 99

Conread position: 1068-1288
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 1068-1288
Cow position:
Alignm length: 224
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 58

Conread position: 1068-1289
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1289
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 1068-1293
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 150, 111

Conread position: 1068-1293
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 175, 110

Conread position: 1068-1294
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 32, 138

Conread position: 1068-1294
Cow position:
Alignm length: 230
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 118, 99

Conread position: 1068-1295
Cow position:
Alignm length: 229
Alignm identity: 157
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 201, 175

Conread position: 1068-1295
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 171, 210

Conread position: 1068-1295
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 51, 31

Conread position: 1068-1295
Cow position:
Alignm length: 228
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 1068-1296
Cow position:
Alignm length: 230
Alignm identity: 152
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 168, 119

Conread position: 1068-1296
Cow position:
Alignm length: 236
Alignm identity: 157
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 124, 110

Conread position: 1068-1296
Cow position:
Alignm length: 231
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 218, 110

Conread position: 1068-1296
Cow position:
Alignm length: 235
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 88, 128

Conread position: 1068-1296
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 175, 120

Conread position: 1069-1275
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1069-1278
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 92, 87

Conread position: 1069-1283
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 125, 187

Conread position: 1069-1285
Cow position:
Alignm length: 218
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 10, 72

Conread position: 1069-1288
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 86, 109

Conread position: 1069-1290
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 126, 46

Conread position: 1069-1290
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 205, 48

Conread position: 1069-1293
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 97, 48

Conread position: 1069-1296
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 30, 100

Conread position: 1069-1296
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 48, 0

Conread position: 1070-1282
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 108, 0

Conread position: 1070-1283
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 1070-1284
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 1070-1286
Cow position:
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 204, 45

Conread position: 1070-1288
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 30

Conread position: 1070-1288
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 1070-1288
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 1070-1289
Cow position:
Alignm length: 222
Alignm identity: 153
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 105, 202

Conread position: 1070-1289
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 168, 95

Conread position: 1070-1294
Cow position:
Alignm length: 231
Alignm identity: 156
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 99, 94

Conread position: 1070-1295
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 1070-1295
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 126, 45

Conread position: 1070-1295
Cow position:
Alignm length: 231
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 132, 108

Conread position: 1070-1296
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 0

Conread position: 1071-1296
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 115, 96

Conread position: 1073-1241
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 1073-1273
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 118, 76

Conread position: 1073-1288
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 105, 0

Conread position: 1073-1295
Cow position:
Alignm length: 224
Alignm identity: 165
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 143, 121

Conread position: 1075-1261
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 1075-1278
Cow position:
Alignm length: 207
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 1075-1283
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 5

Conread position: 1075-1283
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 1075-1296
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 20, 50

Conread position: 1079-1282
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 199, 36

Conread position: 1080-1276
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 1080-1295
Cow position:
Alignm length: 222
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 94, 86

Conread position: 1080-1296
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 214

Conread position: 1082-1283
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 104, 85

Conread position: 1082-1283
Cow position:
Alignm length: 203
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 194, 75

Conread position: 1082-1283
Cow position:
Alignm length: 204
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 102

Conread position: 1082-1296
Cow position:
Alignm length: 215
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 1083-1276
Cow position:
Alignm length: 194
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1083-1279
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 1083-1281
Cow position:
Alignm length: 199
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 131, 0

Conread position: 1083-1283
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 181, 95

Conread position: 1083-1295
Cow position:
Alignm length: 213
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 1083-1296
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 48

Conread position: 1083-1296
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 98

Conread position: 1084-1281
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 111

Conread position: 1084-1283
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 82

Conread position: 1084-1291
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 83

Conread position: 1085-1275
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 1085-1296
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 1086-1278
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 108, 31

Conread position: 1086-1278
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 83, 123

Conread position: 1087-1285
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 82, 39

Conread position: 1088-1283
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 79

Conread position: 1090-1288
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 81

Conread position: 1090-1295
Cow position:
Alignm length: 209
Alignm identity: 140
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 105, 74

Conread position: 1093-1275
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 1094-1288
Cow position:
Alignm length: 197
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 102, 189

Conread position: 1096-1296
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 71

Conread position: 1097-1295
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 70

Conread position: 1099-1293
Cow position:
Alignm length: 198
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 65

Conread position: 1100-1279
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 1105-1296
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 82, 175

Conread position: 1106-1288
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 105, 58

Conread position: 1110-1287
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 1112-1296
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 167, 66

Conread position: 1117-1296
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 157, 94

Conread position: 1118-1268
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 125, 68

Conread position: 1119-1284
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 1120-1288
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1120-1288
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 1121-1296
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 1133-1288
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.