Cow genome map

Conread name: Ss1.1-rret14_m21.5

Conread position: 1061-1266
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 1061-1283
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 1061-1283
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 1061-1283
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 117, 0

Conread position: 1063-1287
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 54

Conread position: 1065-1199
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 1065-1280
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 1067-1274
Cow position:
Alignm length: 210
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 1067-1277
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 130, 48

Conread position: 1067-1278
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 1067-1288
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 1067-1288
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 112, 0

Conread position: 1067-1289
Cow position:
Alignm length: 227
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 98

Conread position: 1067-1289
Cow position:
Alignm length: 230
Alignm identity: 159
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 107, 215

Conread position: 1067-1296
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 99

Conread position: 1068-1259
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1260
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 1068-1261
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 1068-1265
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1068-1267
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 140, 111

Conread position: 1068-1268
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 118, 0

Conread position: 1068-1273
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 1068-1278
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 1068-1278
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1278
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 1068-1283
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 1068-1283
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 118, 0

Conread position: 1068-1283
Cow position:
Alignm length: 222
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 98

Conread position: 1068-1283
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 1068-1283
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 1068-1284
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 120, 0

Conread position: 1068-1285
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 123, 186

Conread position: 1068-1285
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 123, 206

Conread position: 1068-1285
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 207, 0

Conread position: 1068-1286
Cow position:
Alignm length: 223
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 118

Conread position: 1068-1287
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1288
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 5

Conread position: 1068-1293
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 103, 211

Conread position: 1068-1295
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 126, 209

Conread position: 1068-1296
Cow position:
Alignm length: 230
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 209, 112

Conread position: 1068-1296
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 1068-1296
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 1068-1296
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 110, 0

Conread position: 1069-1265
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 1069-1268
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 120

Conread position: 1069-1277
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 1069-1277
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 1069-1283
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 147, 109

Conread position: 1069-1283
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 1069-1285
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 1069-1285
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 71, 17

Conread position: 1069-1288
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 100, 95

Conread position: 1069-1288
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 109, 0

Conread position: 1069-1288
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 1069-1295
Cow position:
Alignm length: 230
Alignm identity: 154
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 86, 106

Conread position: 1070-1266
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 108, 0

Conread position: 1070-1275
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 109, 0

Conread position: 1070-1278
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 0

Conread position: 1070-1281
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 56

Conread position: 1070-1284
Cow position:
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 1070-1285
Cow position:
Alignm length: 226
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 1070-1288
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 105, 45

Conread position: 1070-1288
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 47

Conread position: 1070-1295
Cow position:
Alignm length: 232
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 97

Conread position: 1070-1296
Cow position:
Alignm length: 227
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 1070-1296
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 212

Conread position: 1071-1284
Cow position:
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 110

Conread position: 1073-1264
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 132, 109

Conread position: 1074-1282
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 116

Conread position: 1075-1276
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 107, 0

Conread position: 1075-1278
Cow position:
Alignm length: 206
Alignm identity: 144
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 87

Conread position: 1075-1295
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 201, 103

Conread position: 1075-1296
Cow position:
Alignm length: 230
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 80, 160

Conread position: 1076-1261
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 44, 0

Conread position: 1080-1268
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 116, 167

Conread position: 1081-1283
Cow position:
Alignm length: 208
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 85

Conread position: 1082-1276
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 44, 63

Conread position: 1082-1283
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 103

Conread position: 1082-1294
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 86

Conread position: 1082-1295
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 1082-1296
Cow position:
Alignm length: 218
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 85

Conread position: 1082-1296
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 71, 104

Conread position: 1083-1282
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 72

Conread position: 1083-1283
Cow position:
Alignm length: 205
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 116, 81

Conread position: 1083-1283
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 95

Conread position: 1083-1283
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 1083-1288
Cow position:
Alignm length: 209
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 81

Conread position: 1083-1290
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 1083-1296
Cow position:
Alignm length: 214
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 1083-1296
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 125, 62

Conread position: 1083-1296
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 125, 62

Conread position: 1084-1261
Cow position:
Alignm length: 184
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1084-1279
Cow position:
Alignm length: 196
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 1084-1295
Cow position:
Alignm length: 213
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 202, 87

Conread position: 1084-1295
Cow position:
Alignm length: 217
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 80

Conread position: 1085-1276
Cow position:
Alignm length: 197
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 70

Conread position: 1085-1288
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 88, 102

Conread position: 1085-1296
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 47

Conread position: 1086-1278
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 1086-1282
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 106

Conread position: 1086-1284
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 1086-1288
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 18

Conread position: 1086-1296
Cow position:
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 27, 0

Conread position: 1086-1296
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 110, 92

Conread position: 1086-1296
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 80

Conread position: 1086-1296
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 1087-1283
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1087-1288
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1088-1283
Cow position:
Alignm length: 199
Alignm identity: 137
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 101, 43

Conread position: 1088-1296
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 1089-1278
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 1089-1278
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 106, 58

Conread position: 1090-1272
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 1090-1281
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 111, 46

Conread position: 1091-1295
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 125, 0

Conread position: 1092-1283
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 92, 74

Conread position: 1096-1288
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 1097-1296
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 1102-1288
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 77, 0

Conread position: 1103-1278
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 1105-1268
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 1117-1275
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 1120-1296
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 66

Conread position: 1125-1296
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 155, 0

Conread position: 1126-1293
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 1134-1296
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 1135-1276
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 44

Show alignments to all cow chromosomes.