Cow genome map

Conread name: Ss1.1-rret14_m21.5

Conread position: 1-1023
Cow position:
Alignm length: 1056
Alignm identity: 827
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 24

Conread position: 1025-1281
Cow position:
Alignm length: 260
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 13

Conread position: 1051-1255
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 158, 39

Conread position: 1052-1277
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 213, 15

Conread position: 1058-1295
Cow position:
Alignm length: 244
Alignm identity: 166
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 37

Conread position: 1061-1296
Cow position:
Alignm length: 237
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 214, 0

Conread position: 1063-1291
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 28

Conread position: 1063-1293
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 90

Conread position: 1067-1278
Cow position:
Alignm length: 212
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 189, 0

Conread position: 1067-1279
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 64

Conread position: 1067-1284
Cow position:
Alignm length: 219
Alignm identity: 149
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 209, 98

Conread position: 1067-1285
Cow position:
Alignm length: 219
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1067-1295
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 131, 40

Conread position: 1067-1296
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 1067-1296
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 201, 119

Conread position: 1068-1209
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 1068-1210
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 1068-1261
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 120, 0

Conread position: 1068-1261
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 143, 30

Conread position: 1068-1263
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 107, 0

Conread position: 1068-1268
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1268
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1068-1272
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 49

Conread position: 1068-1274
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 1068-1277
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 5

Conread position: 1068-1277
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 0

Conread position: 1068-1278
Cow position:
Alignm length: 215
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 5

Conread position: 1068-1278
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 118, 0

Conread position: 1068-1279
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 1068-1280
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 0

Conread position: 1068-1281
Cow position:
Alignm length: 218
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 99

Conread position: 1068-1281
Cow position:
Alignm length: 215
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 118, 110

Conread position: 1068-1281
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 1068-1282
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 118, 98

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 102

Conread position: 1068-1283
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 98, 121

Conread position: 1068-1285
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1285
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 210, 47

Conread position: 1068-1285
Cow position:
Alignm length: 221
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 206

Conread position: 1068-1288
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 104

Conread position: 1068-1288
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 140, 44

Conread position: 1068-1288
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 150, 44

Conread position: 1068-1288
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 1068-1291
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 211, 0

Conread position: 1068-1291
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 145, 58

Conread position: 1068-1292
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 206, 44

Conread position: 1068-1293
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 212, 0

Conread position: 1068-1294
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 1068-1296
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 124, 0

Conread position: 1068-1296
Cow position:
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1296
Cow position:
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 98

Conread position: 1068-1296
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 1068-1296
Cow position:
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 116

Conread position: 1069-1260
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 121, 96

Conread position: 1069-1266
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 16

Conread position: 1069-1280
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 43

Conread position: 1069-1282
Cow position:
Alignm length: 215
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 139, 86

Conread position: 1069-1284
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 7, 44

Conread position: 1069-1285
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 124, 90

Conread position: 1069-1285
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 190, 109

Conread position: 1069-1287
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 1069-1288
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 124, 0

Conread position: 1069-1288
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 1069-1288
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 1069-1294
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 108

Conread position: 1070-1261
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 1070-1277
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 132, 106

Conread position: 1070-1278
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 35

Conread position: 1070-1284
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 86

Conread position: 1070-1287
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 54

Conread position: 1070-1289
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 205, 46

Conread position: 1070-1291
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 132, 84

Conread position: 1070-1294
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 105, 0

Conread position: 1070-1296
Cow position:
Alignm length: 230
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 104, 96

Conread position: 1070-1296
Cow position:
Alignm length: 231
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 136, 94

Conread position: 1070-1296
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 161, 95

Conread position: 1070-1296
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 99

Conread position: 1071-1281
Cow position:
Alignm length: 212
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 19

Conread position: 1073-1283
Cow position:
Alignm length: 211
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 1073-1291
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 186, 105

Conread position: 1073-1295
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 1073-1296
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 79, 88

Conread position: 1074-1296
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 202, 108

Conread position: 1075-1275
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 144, 24

Conread position: 1075-1288
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 1075-1295
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 1075-1296
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 1076-1273
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 1076-1288
Cow position:
Alignm length: 213
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 1079-1288
Cow position:
Alignm length: 210
Alignm identity: 164
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 0

Conread position: 1080-1283
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 197

Conread position: 1080-1288
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 110, 128

Conread position: 1080-1288
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 1080-1296
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 98, 0

Conread position: 1081-1296
Cow position:
Alignm length: 218
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 195, 85

Conread position: 1082-1285
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 102

Conread position: 1082-1289
Cow position:
Alignm length: 210
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 1082-1295
Cow position:
Alignm length: 217
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 85

Conread position: 1083-1268
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 102

Conread position: 1083-1278
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 92, 37

Conread position: 1083-1283
Cow position:
Alignm length: 205
Alignm identity: 138
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 1083-1288
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 141, 88

Conread position: 1083-1289
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 144, 29

Conread position: 1083-1294
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 92, 57

Conread position: 1083-1295
Cow position:
Alignm length: 217
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 41

Conread position: 1083-1296
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 101

Conread position: 1084-1273
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 1084-1278
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 102, 0

Conread position: 1084-1288
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 192, 71

Conread position: 1085-1265
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 30

Conread position: 1085-1288
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 1085-1296
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 1086-1288
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 1087-1282
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 1089-1278
Cow position:
Alignm length: 190
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 1089-1281
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 100

Conread position: 1090-1274
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 1093-1296
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 14

Conread position: 1093-1296
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 95

Conread position: 1097-1273
Cow position:
Alignm length: 178
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 1099-1283
Cow position:
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 77, 68

Conread position: 1101-1284
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 0

Conread position: 1102-1296
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 161, 63

Conread position: 1103-1276
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 1106-1281
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 1106-1295
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 86, 161

Conread position: 1107-1278
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 1109-1277
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 1117-1287
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 57

Conread position: 1117-1288
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 51

Conread position: 1117-1295
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 1123-1284
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1133-1275
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.