Cow genome map

Conread name: Ss1.1-rret14_m21.5

Conread position: 1056-1284
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 140, 112

Conread position: 1057-1296
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 12, 133

Conread position: 1058-1280
Cow position:
Alignm length: 229
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 108

Conread position: 1061-1283
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 110

Conread position: 1061-1294
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 41

Conread position: 1062-1277
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 112, 184

Conread position: 1063-1277
Cow position:
Alignm length: 218
Alignm identity: 148
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 133, 19

Conread position: 1064-1288
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 1067-1209
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 77

Conread position: 1067-1278
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 144, 48

Conread position: 1068-1260
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1265
Cow position:
Alignm length: 198
Alignm identity: 150
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1265
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 149, 47

Conread position: 1068-1265
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1266
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 7, 0

Conread position: 1068-1266
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 1068-1268
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 1068-1273
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 126, 178

Conread position: 1068-1277
Cow position:
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 24

Conread position: 1068-1278
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 1068-1280
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 142, 43

Conread position: 1068-1281
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 130, 97

Conread position: 1068-1283
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 106, 96

Conread position: 1068-1283
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 1068-1283
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 120, 0

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 98

Conread position: 1068-1283
Cow position:
Alignm length: 219
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 121, 99

Conread position: 1068-1283
Cow position:
Alignm length: 220
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 113, 102

Conread position: 1068-1284
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 126, 103

Conread position: 1068-1285
Cow position:
Alignm length: 218
Alignm identity: 158
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 111, 0

Conread position: 1068-1285
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 1068-1287
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 204

Conread position: 1068-1287
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 72, 0

Conread position: 1068-1288
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 194, 15

Conread position: 1068-1288
Cow position:
Alignm length: 225
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 1068-1288
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 153, 44

Conread position: 1068-1288
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 134, 43

Conread position: 1068-1288
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 111

Conread position: 1068-1288
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 57, 107

Conread position: 1068-1288
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 1068-1295
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 208, 97

Conread position: 1068-1295
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 1068-1295
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 119

Conread position: 1068-1295
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 201, 0

Conread position: 1068-1296
Cow position:
Alignm length: 236
Alignm identity: 162
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 124, 25

Conread position: 1068-1296
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 215, 111

Conread position: 1068-1296
Cow position:
Alignm length: 233
Alignm identity: 159
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 7

Conread position: 1068-1296
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 1068-1296
Cow position:
Alignm length: 237
Alignm identity: 162
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 113, 49

Conread position: 1068-1296
Cow position:
Alignm length: 232
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 113, 99

Conread position: 1068-1296
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 134, 118

Conread position: 1068-1296
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 126, 0

Conread position: 1069-1277
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 1069-1283
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 1069-1283
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 98

Conread position: 1069-1285
Cow position:
Alignm length: 219
Alignm identity: 149
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 107, 13

Conread position: 1069-1288
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 200, 37

Conread position: 1069-1289
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 1070-1252
Cow position:
Alignm length: 183
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 1070-1278
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1070-1279
Cow position:
Alignm length: 214
Alignm identity: 145
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 85, 128

Conread position: 1070-1284
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 117, 108

Conread position: 1070-1285
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 93

Conread position: 1070-1288
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 37, 0

Conread position: 1072-1293
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1073-1277
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 140, 0

Conread position: 1074-1275
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 192, 104

Conread position: 1075-1277
Cow position:
Alignm length: 203
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 1075-1277
Cow position:
Alignm length: 205
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 130, 170

Conread position: 1075-1296
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 1078-1285
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 1080-1283
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 199, 32

Conread position: 1080-1283
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 1080-1285
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 1080-1296
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 35, 0

Conread position: 1082-1283
Cow position:
Alignm length: 203
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 194, 84

Conread position: 1082-1283
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 92, 84

Conread position: 1082-1295
Cow position:
Alignm length: 218
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 180

Conread position: 1082-1296
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 99, 85

Conread position: 1082-1296
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 84

Conread position: 1083-1267
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 1083-1288
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 89, 72

Conread position: 1083-1288
Cow position:
Alignm length: 210
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 91, 148

Conread position: 1083-1290
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 193, 29

Conread position: 1084-1278
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 78

Conread position: 1085-1282
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 103, 36

Conread position: 1085-1282
Cow position:
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 24

Conread position: 1085-1283
Cow position:
Alignm length: 200
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 183, 94

Conread position: 1085-1288
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 1085-1295
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 114, 103

Conread position: 1085-1296
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 1086-1273
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 1086-1278
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 64, 97

Conread position: 1086-1296
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 127, 53

Conread position: 1088-1283
Cow position:
Alignm length: 201
Alignm identity: 140
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 84, 77

Conread position: 1089-1280
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 73

Conread position: 1089-1296
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 67, 93

Conread position: 1093-1296
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 183, 72

Conread position: 1096-1274
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 1096-1275
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 57

Conread position: 1096-1288
Cow position:
Alignm length: 196
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 1096-1288
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 1099-1288
Cow position:
Alignm length: 193
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 65

Conread position: 1099-1296
Cow position:
Alignm length: 200
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 177, 66

Conread position: 1100-1284
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 174, 60

Conread position: 1102-1296
Cow position:
Alignm length: 198
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 62

Conread position: 1107-1262
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 5

Conread position: 1117-1283
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 1117-1290
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 1122-1283
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 92, 57

Conread position: 1122-1296
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 153, 60

Conread position: 1123-1288
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 155, 65

Conread position: 1134-1288
Cow position:
Alignm length: 155
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 1143-1285
Cow position:
Alignm length: 143
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.