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Cow genome map

           
Conread name:
           
Ss1.1-rret24_f24.5
        

               
Conread position:
               
29-504
               

               
Cow position:
               
chr17:43142103-43141612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
63, 210
               

               
Conread position:
               
52-501
               

               
Cow position:
               
chr17:22775038-22775468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 15
               

               
Conread position:
               
54-413
               

               
Cow position:
               
chr17:23337365-23337010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 13
               

               
Conread position:
               
56-215
               

               
Cow position:
               
chr17:8995739-8995583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
57-245
               

               
Cow position:
               
chr17:30727924-30728106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
57-504
               

               
Cow position:
               
chr17:6566129-6566578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 25
               

               
Conread position:
               
58-311
               

               
Cow position:
               
chr17:19906734-19906979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
58-461
               

               
Cow position:
               
chr17:242290-242689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 9
               

               
Conread position:
               
58-504
               

               
Cow position:
               
chr17:35388365-35387904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
60-222
               

               
Cow position:
               
chr17:13458169-13458005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
60-369
               

               
Cow position:
               
chr17:13237068-13236760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
60-504
               

               
Cow position:
               
chr17:21680419-21680876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 22
               

               
Conread position:
               
60-504
               

               
Cow position:
               
chr17:24580628-24580197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 19
               

               
Conread position:
               
64-326
               

               
Cow position:
               
chr17:21182201-21182454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
20, 153
               

               
Conread position:
               
65-184
               

               
Cow position:
               
chr17:24587230-24587346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
65-379
               

               
Cow position:
               
chr17:15893562-15893878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
198, 14
               

               
Conread position:
               
65-493
               

               
Cow position:
               
chr17:30664933-30665357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
66-294
               

               
Cow position:
               
chr17:3371105-3371323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
67-207
               

               
Cow position:
               
chr17:10219847-10219990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
67-228
               

               
Cow position:
               
chr17:40368583-40368742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
67-452
               

               
Cow position:
               
chr17:1654021-1653650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
168, 17
               

               
Conread position:
               
67-504
               

               
Cow position:
               
chr17:6936999-6936583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 50
               

               
Conread position:
               
67-504
               

               
Cow position:
               
chr17:34595598-34596037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 146
               

               
Conread position:
               
68-204
               

               
Cow position:
               
chr17:38992464-38992597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
68-245
               

               
Cow position:
               
chr17:17983113-17982941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
68-302
               

               
Cow position:
               
chr17:242005-242237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
145, 14
               

               
Conread position:
               
68-377
               

               
Cow position:
               
chr17:16117770-16117452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
68-405
               

               
Cow position:
               
chr17:21871075-21870732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
153, 13
               

               
Conread position:
               
68-411
               

               
Cow position:
               
chr17:26084697-26085040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
114, 21
               

               
Conread position:
               
68-477
               

               
Cow position:
               
chr17:11375033-11374628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
12, 177
               

               
Conread position:
               
68-489
               

               
Cow position:
               
chr17:5898865-5898452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
68-502
               

               
Cow position:
               
chr17:27795304-27795749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 192
               

               
Conread position:
               
68-504
               

               
Cow position:
               
chr17:21336036-21335595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 14
               

               
Conread position:
               
69-222
               

               
Cow position:
               
chr17:730789-730637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
69-244
               

               
Cow position:
               
chr17:13108337-13108510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
69-330
               

               
Cow position:
               
chr17:3154110-3153844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
147, 103
               

               
Conread position:
               
69-358
               

               
Cow position:
               
chr17:21807149-21806854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
50, 115
               

               
Conread position:
               
70-479
               

               
Cow position:
               
chr17:26182883-26183299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 11
               

               
Conread position:
               
71-253
               

               
Cow position:
               
chr17:17381696-17381505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
71-328
               

               
Cow position:
               
chr17:23517506-23517246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 202
               

               
Conread position:
               
71-504
               

               
Cow position:
               
chr17:24823925-24824339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
72-393
               

               
Cow position:
               
chr17:16895632-16895318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
144, 184
               

               
Conread position:
               
72-483
               

               
Cow position:
               
chr17:9564972-9565380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 75
               

               
Conread position:
               
72-504
               

               
Cow position:
               
chr17:5280979-5280558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 12
               

               
Conread position:
               
72-504
               

               
Cow position:
               
chr17:12929881-12929434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 216
               

               
Conread position:
               
73-410
               

               
Cow position:
               
chr17:25145647-25145317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
139, 185
               

               
Conread position:
               
73-503
               

               
Cow position:
               
chr17:33272009-33271587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 9
               

               
Conread position:
               
73-504
               

               
Cow position:
               
chr17:18490199-18490637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 98
               

               
Conread position:
               
74-222
               

               
Cow position:
               
chr17:9903604-9903749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
74-387
               

               
Cow position:
               
chr17:7821368-7821051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
74-409
               

               
Cow position:
               
chr17:4299290-4299619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
212, 43
               

               
Conread position:
               
75-204
               

               
Cow position:
               
chr17:16904295-16904422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
75-220
               

               
Cow position:
               
chr17:20271690-20271546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
75-303
               

               
Cow position:
               
chr17:9936493-9936263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
75-340
               

               
Cow position:
               
chr17:9663037-9662764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
75-341
               

               
Cow position:
               
chr17:43178122-43177869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
75-349
               

               
Cow position:
               
chr17:20269277-20269544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
230, 138
               

               
Conread position:
               
75-382
               

               
Cow position:
               
chr17:22248537-22248222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
75-393
               

               
Cow position:
               
chr17:2265904-2266230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
140, 170
               

               
Conread position:
               
75-397
               

               
Cow position:
               
chr17:2584366-2584690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 110
               

               
Conread position:
               
75-405
               

               
Cow position:
               
chr17:5255707-5255373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
145, 53
               

               
Conread position:
               
75-411
               

               
Cow position:
               
chr17:44862136-44861793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
75-457
               

               
Cow position:
               
chr17:21495043-21495425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 7
               

               
Conread position:
               
75-500
               

               
Cow position:
               
chr17:20022851-20022421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 7
               

               
Conread position:
               
75-501
               

               
Cow position:
               
chr17:5900051-5900463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
75-504
               

               
Cow position:
               
chr17:1568503-1568077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
141, 7
               

               
Conread position:
               
75-504
               

               
Cow position:
               
chr17:20993375-20992945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 190
               

               
Conread position:
               
76-174
               

               
Cow position:
               
chr17:21666716-21666814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-180
               

               
Cow position:
               
chr17:10494222-10494118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-180
               

               
Cow position:
               
chr17:40811433-40811537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-183
               

               
Cow position:
               
chr17:19756513-19756407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
76-187
               

               
Cow position:
               
chr17:32472164-32472053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-188
               

               
Cow position:
               
chr17:33039889-33039777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-190
               

               
Cow position:
               
chr17:4064042-4064157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
76-192
               

               
Cow position:
               
chr17:9060346-9060231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
76-202
               

               
Cow position:
               
chr17:4685001-4685127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-202
               

               
Cow position:
               
chr17:32977532-32977406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-204
               

               
Cow position:
               
chr17:2202014-2202142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-204
               

               
Cow position:
               
chr17:10445870-10445998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-204
               

               
Cow position:
               
chr17:10586677-10586548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
76-204
               

               
Cow position:
               
chr17:15559289-15559417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-204
               

               
Cow position:
               
chr17:33486786-33486914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-204
               

               
Cow position:
               
chr17:44030259-44030387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-211
               

               
Cow position:
               
chr17:14027710-14027573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
76-211
               

               
Cow position:
               
chr17:31671183-31671048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-216
               

               
Cow position:
               
chr17:43470874-43470735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
76-219
               

               
Cow position:
               
chr17:25835134-25835277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-220
               

               
Cow position:
               
chr17:3196920-3196776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-220
               

               
Cow position:
               
chr17:24026268-24026120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
76-221
               

               
Cow position:
               
chr17:1537029-1537174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:77049-76902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:184863-185010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:399898-399751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:3652010-3651871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
139, 96
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:5638175-5638028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:9818224-9818077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:10512223-10512076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:14239769-14239622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:15118533-15118680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:15894641-15894494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:16876071-16876218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:19925409-19925263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
139, 95
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:26870599-26870452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:31077047-31077194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:34191266-34191119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:42843718-42843865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr17:43992201-43992348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
76-223
               

               
Cow position:
               
chr17:24978775-24978923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-226
               

               
Cow position:
               
chr17:9897583-9897730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
139, 111
               

               
Conread position:
               
76-228
               

               
Cow position:
               
chr17:10249825-10249977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-228
               

               
Cow position:
               
chr17:40701337-40701489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-235
               

               
Cow position:
               
chr17:30753385-30753224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
76-239
               

               
Cow position:
               
chr17:11638552-11638715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
141, 137
               

               
Conread position:
               
76-241
               

               
Cow position:
               
chr17:35223215-35223391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
76-242
               

               
Cow position:
               
chr17:4107350-4107188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
76-242
               

               
Cow position:
               
chr17:4123086-4122923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
76-245
               

               
Cow position:
               
chr17:38829750-38829919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 93
               

               
Conread position:
               
76-246
               

               
Cow position:
               
chr17:29450189-29450019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
145, 16
               

               
Conread position:
               
76-247
               

               
Cow position:
               
chr17:28242196-28242368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
76-298
               

               
Cow position:
               
chr17:1456570-1456346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
97, 174
               

               
Conread position:
               
76-298
               

               
Cow position:
               
chr17:9748436-9748658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
76-305
               

               
Cow position:
               
chr17:23320705-23320483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
76-310
               

               
Cow position:
               
chr17:42026202-42026426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
76-314
               

               
Cow position:
               
chr17:14212304-14212072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
82, 145
               

               
Conread position:
               
76-314
               

               
Cow position:
               
chr17:26829029-26828786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-317
               

               
Cow position:
               
chr17:1105215-1105457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
218, 144
               

               
Conread position:
               
76-328
               

               
Cow position:
               
chr17:22057507-22057251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
144, 179
               

               
Conread position:
               
76-330
               

               
Cow position:
               
chr17:3388526-3388772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
76-334
               

               
Cow position:
               
chr17:5748134-5747865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
139, 201
               

               
Conread position:
               
76-340
               

               
Cow position:
               
chr17:12657976-12657705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-340
               

               
Cow position:
               
chr17:20546854-20547126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-341
               

               
Cow position:
               
chr17:18764404-18764125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
76-342
               

               
Cow position:
               
chr17:40405973-40406243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
140, 102
               

               
Conread position:
               
76-342
               

               
Cow position:
               
chr17:40802478-40802738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
139, 174
               

               
Conread position:
               
76-344
               

               
Cow position:
               
chr17:6082213-6082471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
202, 27
               

               
Conread position:
               
76-348
               

               
Cow position:
               
chr17:29715520-29715245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
143, 198
               

               
Conread position:
               
76-349
               

               
Cow position:
               
chr17:15319008-15319288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-352
               

               
Cow position:
               
chr17:13409685-13409403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
139, 6
               

               
Conread position:
               
76-353
               

               
Cow position:
               
chr17:8804060-8803788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
232, 105
               

               
Conread position:
               
76-354
               

               
Cow position:
               
chr17:25947138-25946852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
140, 202
               

               
Conread position:
               
76-355
               

               
Cow position:
               
chr17:35233771-35234054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 93
               

               
Conread position:
               
76-355
               

               
Cow position:
               
chr17:36504361-36504079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
148, 158
               

               
Conread position:
               
76-356
               

               
Cow position:
               
chr17:8644703-8644989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
144, 180
               

               
Conread position:
               
76-356
               

               
Cow position:
               
chr17:11471573-11471858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
145, 19
               

               
Conread position:
               
76-356
               

               
Cow position:
               
chr17:15328995-15329283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
145, 194
               

               
Conread position:
               
76-363
               

               
Cow position:
               
chr17:14901591-14901888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
145, 200
               

               
Conread position:
               
76-363
               

               
Cow position:
               
chr17:21038947-21039235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 20
               

               
Conread position:
               
76-363
               

               
Cow position:
               
chr17:29074675-29074378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 204
               

               
Conread position:
               
76-363
               

               
Cow position:
               
chr17:29083872-29084146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
104, 147
               

               
Conread position:
               
76-364
               

               
Cow position:
               
chr17:3138913-3138632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
228, 152
               

               
Conread position:
               
76-364
               

               
Cow position:
               
chr17:13725978-13726275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
112, 201
               

               
Conread position:
               
76-365
               

               
Cow position:
               
chr17:14265887-14265595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
136, 23
               

               
Conread position:
               
76-366
               

               
Cow position:
               
chr17:5695276-5694988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
180, 116
               

               
Conread position:
               
76-367
               

               
Cow position:
               
chr17:6072244-6072544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
76-367
               

               
Cow position:
               
chr17:9176017-9175728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
141, 180
               

               
Conread position:
               
76-367
               

               
Cow position:
               
chr17:18099371-18099078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 21
               

               
Conread position:
               
76-367
               

               
Cow position:
               
chr17:18312173-18312471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
76-367
               

               
Cow position:
               
chr17:29276898-29277192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 200
               

               
Conread position:
               
76-372
               

               
Cow position:
               
chr17:19377434-19377130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-379
               

               
Cow position:
               
chr17:3683991-3683686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
179, 200
               

               
Conread position:
               
76-379
               

               
Cow position:
               
chr17:15103213-15102912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
140, 16
               

               
Conread position:
               
76-379
               

               
Cow position:
               
chr17:15243835-15243523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
62, 304
               

               
Conread position:
               
76-379
               

               
Cow position:
               
chr17:25077159-25076852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
145, 200
               

               
Conread position:
               
76-379
               

               
Cow position:
               
chr17:28359499-28359818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
162, 128
               

               
Conread position:
               
76-380
               

               
Cow position:
               
chr17:16505029-16504720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-380
               

               
Cow position:
               
chr17:21439549-21439861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-380
               

               
Cow position:
               
chr17:21926376-21926682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-380
               

               
Cow position:
               
chr17:28155642-28155330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-380
               

               
Cow position:
               
chr17:29364470-29364781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
139, 75
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:4152557-4152243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:5541905-5541591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:6145476-6145790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:6956356-6956672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:7396577-7396261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
117, 202
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:7585136-7585447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:8213954-8214268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:8993624-8993310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:9914274-9914588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:10025734-10025420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:10354396-10354082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:11786640-11786954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:12856968-12857282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:13966787-13966473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:14932222-14931911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
216, 157
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:15439506-15439820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:17958313-17958623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:19214693-19214380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:21660049-21659740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:27986170-27985856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:30225093-30224779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:31532027-31532341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:34565063-34565377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:38837235-38837544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
139, 120
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr17:43539720-43540034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-385
               

               
Cow position:
               
chr17:26771688-26771378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
140, 188
               

               
Conread position:
               
76-386
               

               
Cow position:
               
chr17:20006224-20006538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
149, 171
               

               
Conread position:
               
76-387
               

               
Cow position:
               
chr17:43717642-43717334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 136
               

               
Conread position:
               
76-390
               

               
Cow position:
               
chr17:37528031-37527709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:6123500-6123825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:8673775-8674085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
240, 146
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:12357247-12356925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
145, 173
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:14231886-14231567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
106, 132
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:20361090-20360766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
109, 206
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:20987934-20987609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:24553671-24553993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:24786051-24786374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:26822761-26823086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:27667528-27667202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 185
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:27791078-27790753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
139, 165
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:33058892-33058568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
139, 244
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:34005571-34005250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
216, 154
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:34235533-34235208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:34390895-34390573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
154, 200
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:35437760-35438085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:42398101-42398422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
216, 145
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr17:43725846-43725524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-395
               

               
Cow position:
               
chr17:31986484-31986157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-396
               

               
Cow position:
               
chr17:19266740-19266416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
124, 202
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:139332-139657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
154, 77
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:3743880-3744209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:5548834-5548505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:5805774-5805445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:5809940-5809611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:6263574-6263903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:6612739-6613068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:8223420-8223747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
141, 131
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:10008898-10008569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:10254613-10254942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:11677520-11677191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:13999339-13999010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:16699760-16699437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
154, 193
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:16854391-16854063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
198, 57
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:16874301-16874630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:19317630-19317959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:20232065-20231736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
139, 170
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:21716479-21716150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:24095047-24094718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:25195409-25195738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:27863824-27864153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:28024175-28023846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
167, 202
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr17:39844347-39844676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
136, 200
               

               
Conread position:
               
76-399
               

               
Cow position:
               
chr17:15854456-15854786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
151, 242
               

               
Conread position:
               
76-399
               

               
Cow position:
               
chr17:20391491-20391822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-401
               

               
Cow position:
               
chr17:20358545-20358864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 16
               

               
Conread position:
               
76-404
               

               
Cow position:
               
chr17:20129344-20129660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
76-409
               

               
Cow position:
               
chr17:19998802-19999141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 41
               

               
Conread position:
               
76-410
               

               
Cow position:
               
chr17:20233893-20234232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 248
               

               
Conread position:
               
76-410
               

               
Cow position:
               
chr17:21363077-21363409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
76-410
               

               
Cow position:
               
chr17:23101541-23101205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 96
               

               
Conread position:
               
76-411
               

               
Cow position:
               
chr17:26764683-26765022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 102
               

               
Conread position:
               
76-413
               

               
Cow position:
               
chr17:5997436-5997092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
76-413
               

               
Cow position:
               
chr17:30539583-30539246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 173
               

               
Conread position:
               
76-413
               

               
Cow position:
               
chr17:31232274-31231924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
98, 231
               

               
Conread position:
               
76-420
               

               
Cow position:
               
chr17:11386182-11386530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 145
               

               
Conread position:
               
76-454
               

               
Cow position:
               
chr17:5896246-5895866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 181
               

               
Conread position:
               
76-455
               

               
Cow position:
               
chr17:18494856-18494466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
76-460
               

               
Cow position:
               
chr17:5553798-5553416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
145, 96
               

               
Conread position:
               
76-461
               

               
Cow position:
               
chr17:41394043-41393664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
143, 78
               

               
Conread position:
               
76-461
               

               
Cow position:
               
chr17:41400303-41399921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 131
               

               
Conread position:
               
76-473
               

               
Cow position:
               
chr17:15293869-15293468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-473
               

               
Cow position:
               
chr17:17259944-17260345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-475
               

               
Cow position:
               
chr17:18564093-18563691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-475
               

               
Cow position:
               
chr17:19370741-19370336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-475
               

               
Cow position:
               
chr17:21212371-21211966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-475
               

               
Cow position:
               
chr17:36413318-36412913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-475
               

               
Cow position:
               
chr17:39823477-39823072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-475
               

               
Cow position:
               
chr17:41029618-41030016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 189
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr17:31159-31568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
142, 347
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr17:4480166-4479751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 165
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr17:6858726-6858318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
138, 200
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr17:14021753-14021348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
174, 95
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr17:18777124-18776716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
140, 200
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr17:22226593-22226185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
140, 202
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr17:25844405-25844816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
145, 342
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr17:28539710-28540101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 6
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr17:36197287-36197696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
143, 350
               

               
Conread position:
               
76-482
               

               
Cow position:
               
chr17:20780185-20780582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 38
               

               
Conread position:
               
76-483
               

               
Cow position:
               
chr17:32457914-32457490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
76-486
               

               
Cow position:
               
chr17:3781701-3782125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 198
               

               
Conread position:
               
76-490
               

               
Cow position:
               
chr17:15334054-15333628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 146
               

               
Conread position:
               
76-501
               

               
Cow position:
               
chr17:17061006-17060588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
142, 54
               

               
Conread position:
               
76-502
               

               
Cow position:
               
chr17:1410580-1410143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 145
               

               
Conread position:
               
76-502
               

               
Cow position:
               
chr17:1708037-1707609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
106, 202
               

               
Conread position:
               
76-502
               

               
Cow position:
               
chr17:13922144-13922578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 105
               

               
Conread position:
               
76-502
               

               
Cow position:
               
chr17:25542146-25541722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 156
               

               
Conread position:
               
76-502
               

               
Cow position:
               
chr17:32027796-32027357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 349
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:4213423-4213840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
108, 123
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:12289753-12289312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 190
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:13940654-13940225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:14003495-14003922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 165
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:14249367-14248913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
136, 317
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:20082116-20081701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
57, 183
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:20800482-20800910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 205
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:24077072-24077498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 109
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:25815274-25815701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 175
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:26514381-26514816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 313
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:32138731-32138327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
143, 96
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:32989159-32989573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 169
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:32993947-32993527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 187
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:33288988-33288560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 199
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:33934080-33933648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 169
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:34317051-34316620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 271
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr17:40771495-40771929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
77-179
               

               
Cow position:
               
chr17:36282130-36282232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-180
               

               
Cow position:
               
chr17:25194053-25194156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-183
               

               
Cow position:
               
chr17:39771025-39771131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-186
               

               
Cow position:
               
chr17:19455747-19455637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
77-188
               

               
Cow position:
               
chr17:1036217-1036105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
77-188
               

               
Cow position:
               
chr17:6848561-6848674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
77-188
               

               
Cow position:
               
chr17:25140920-25141030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
77-189
               

               
Cow position:
               
chr17:8450418-8450530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-204
               

               
Cow position:
               
chr17:15301847-15301720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-204
               

               
Cow position:
               
chr17:32280209-32280077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
77-206
               

               
Cow position:
               
chr17:25340862-25340733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-208
               

               
Cow position:
               
chr17:28847979-28847848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-210
               

               
Cow position:
               
chr17:27504299-27504430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
77-226
               

               
Cow position:
               
chr17:21666932-21667082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
77-232
               

               
Cow position:
               
chr17:484296-484449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
77-239
               

               
Cow position:
               
chr17:26532538-26532698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
141, 46
               

               
Conread position:
               
77-252
               

               
Cow position:
               
chr17:34208448-34208273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-292
               

               
Cow position:
               
chr17:2270435-2270650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
141, 195
               

               
Conread position:
               
77-301
               

               
Cow position:
               
chr17:4155273-4155496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
138, 108
               

               
Conread position:
               
77-303
               

               
Cow position:
               
chr17:20855347-20855575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 189
               

               
Conread position:
               
77-308
               

               
Cow position:
               
chr17:7560011-7559775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
119, 101
               

               
Conread position:
               
77-315
               

               
Cow position:
               
chr17:20858371-20858145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
5, 78
               

               
Conread position:
               
77-322
               

               
Cow position:
               
chr17:18266729-18266974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 77
               

               
Conread position:
               
77-335
               

               
Cow position:
               
chr17:20507868-20507610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
231, 59
               

               
Conread position:
               
77-344
               

               
Cow position:
               
chr17:1025960-1026217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
134, 73
               

               
Conread position:
               
77-354
               

               
Cow position:
               
chr17:1710060-1710334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
5, 199
               

               
Conread position:
               
77-355
               

               
Cow position:
               
chr17:17266680-17266395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
218, 196
               

               
Conread position:
               
77-358
               

               
Cow position:
               
chr17:20303763-20304049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
144, 202
               

               
Conread position:
               
77-364
               

               
Cow position:
               
chr17:5281634-5281339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
77-366
               

               
Cow position:
               
chr17:12477586-12477884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
77-367
               

               
Cow position:
               
chr17:1312838-1313138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
77-367
               

               
Cow position:
               
chr17:16463448-16463152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 172
               

               
Conread position:
               
77-373
               

               
Cow position:
               
chr17:31427452-31427761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
77-377
               

               
Cow position:
               
chr17:5730591-5730885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 186
               

               
Conread position:
               
77-381
               

               
Cow position:
               
chr17:24503517-24503827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
139, 32
               

               
Conread position:
               
77-382
               

               
Cow position:
               
chr17:1970871-1971185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
138, 158
               

               
Conread position:
               
77-382
               

               
Cow position:
               
chr17:4176957-4176640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
5, 155
               

               
Conread position:
               
77-390
               

               
Cow position:
               
chr17:3498997-3498680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 198
               

               
Conread position:
               
77-392
               

               
Cow position:
               
chr17:34628818-34628494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
111, 199
               

               
Conread position:
               
77-393
               

               
Cow position:
               
chr17:17128811-17129137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
77-398
               

               
Cow position:
               
chr17:25167980-25168310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 144
               

               
Conread position:
               
77-401
               

               
Cow position:
               
chr17:11035589-11035918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 92
               

               
Conread position:
               
77-401
               

               
Cow position:
               
chr17:11382048-11381723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 112
               

               
Conread position:
               
77-405
               

               
Cow position:
               
chr17:10271168-10271494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
212, 135
               

               
Conread position:
               
77-408
               

               
Cow position:
               
chr17:23803133-23803460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
105, 171
               

               
Conread position:
               
77-408
               

               
Cow position:
               
chr17:29292701-29292365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 96
               

               
Conread position:
               
77-410
               

               
Cow position:
               
chr17:19455627-19455308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 50
               

               
Conread position:
               
77-410
               

               
Cow position:
               
chr17:21707335-21707011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
193, 132
               

               
Conread position:
               
77-410
               

               
Cow position:
               
chr17:25755451-25755796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
139, 179
               

               
Conread position:
               
77-411
               

               
Cow position:
               
chr17:10649516-10649846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
138, 179
               

               
Conread position:
               
77-412
               

               
Cow position:
               
chr17:6155708-6156047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 197
               

               
Conread position:
               
77-412
               

               
Cow position:
               
chr17:43527650-43527974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
228, 58
               

               
Conread position:
               
77-413
               

               
Cow position:
               
chr17:5042015-5041675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
77-413
               

               
Cow position:
               
chr17:25740616-25740960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
77-418
               

               
Cow position:
               
chr17:3843159-3843491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 95
               

               
Conread position:
               
77-423
               

               
Cow position:
               
chr17:32651283-32651637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 197
               

               
Conread position:
               
77-431
               

               
Cow position:
               
chr17:20361531-20361890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
139, 44
               

               
Conread position:
               
77-458
               

               
Cow position:
               
chr17:42419405-42419769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 113
               

               
Conread position:
               
77-461
               

               
Cow position:
               
chr17:22773664-22773278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 20
               

               
Conread position:
               
77-466
               

               
Cow position:
               
chr17:979467-979101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
371, 142
               

               
Conread position:
               
77-472
               

               
Cow position:
               
chr17:13144015-13143626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 104
               

               
Conread position:
               
77-475
               

               
Cow position:
               
chr17:8690784-8690376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
77-475
               

               
Cow position:
               
chr17:9853653-9854049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 263
               

               
Conread position:
               
77-475
               

               
Cow position:
               
chr17:23880157-23879754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
139, 27
               

               
Conread position:
               
77-475
               

               
Cow position:
               
chr17:27305830-27306225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 107
               

               
Conread position:
               
77-476
               

               
Cow position:
               
chr17:36284979-36285384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
138, 199
               

               
Conread position:
               
77-479
               

               
Cow position:
               
chr17:28130373-28129972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
140, 102
               

               
Conread position:
               
77-486
               

               
Cow position:
               
chr17:36499911-36499500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
141, 199
               

               
Conread position:
               
77-491
               

               
Cow position:
               
chr17:8280059-8279624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
95, 163
               

               
Conread position:
               
77-491
               

               
Cow position:
               
chr17:12059426-12059010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 67
               

               
Conread position:
               
77-493
               

               
Cow position:
               
chr17:16446764-16446351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 181
               

               
Conread position:
               
77-493
               

               
Cow position:
               
chr17:25608839-25608423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 188
               

               
Conread position:
               
77-493
               

               
Cow position:
               
chr17:39412830-39412416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
138, 42
               

               
Conread position:
               
77-494
               

               
Cow position:
               
chr17:24883896-24883485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
77-502
               

               
Cow position:
               
chr17:20033246-20032817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 63
               

               
Conread position:
               
77-502
               

               
Cow position:
               
chr17:37342806-37342394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
139, 108
               

               
Conread position:
               
77-503
               

               
Cow position:
               
chr17:18861051-18860625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 104
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:923547-923976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 147
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:8926561-8926120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
105, 203
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:11102116-11101710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 78
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:11618247-11618681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 197
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:14033980-14033545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 200
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:17179707-17180140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 130
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:17222012-17222437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 70
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:18201444-18201854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 95
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:20093456-20093029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
178, 7
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:20848203-20848619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 61
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:23063382-23063816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 18
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:25188950-25189382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 95
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:26230606-26231051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 359
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:29472148-29472563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 75
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr17:40289333-40288903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 95
               

               
Conread position:
               
78-219
               

               
Cow position:
               
chr17:28830952-28831090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
78-229
               

               
Cow position:
               
chr17:18122872-18122724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
78-241
               

               
Cow position:
               
chr17:25344272-25344108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
78-252
               

               
Cow position:
               
chr17:24946886-24946713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
78-253
               

               
Cow position:
               
chr17:7614974-7614805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
78-304
               

               
Cow position:
               
chr17:11913032-11912806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
138, 196
               

               
Conread position:
               
78-319
               

               
Cow position:
               
chr17:35287675-35287433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
138, 198
               

               
Conread position:
               
78-341
               

               
Cow position:
               
chr17:148625-148896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
146, 157
               

               
Conread position:
               
78-377
               

               
Cow position:
               
chr17:3386965-3387258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 94
               

               
Conread position:
               
78-379
               

               
Cow position:
               
chr17:3131729-3132029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
78-385
               

               
Cow position:
               
chr17:18036319-18036004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
143, 119
               

               
Conread position:
               
78-405
               

               
Cow position:
               
chr17:27679576-27679239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 196
               

               
Conread position:
               
78-413
               

               
Cow position:
               
chr17:35184703-35185047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
135, 8
               

               
Conread position:
               
78-477
               

               
Cow position:
               
chr17:25590556-25590165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
151, 49
               

               
Conread position:
               
78-480
               

               
Cow position:
               
chr17:24549837-24550249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 145
               

               
Conread position:
               
78-489
               

               
Cow position:
               
chr17:22563863-22564267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
78-491
               

               
Cow position:
               
chr17:2006371-2006777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 121
               

               
Conread position:
               
78-500
               

               
Cow position:
               
chr17:14050524-14050114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
138, 127
               

               
Conread position:
               
78-502
               

               
Cow position:
               
chr17:4601874-4601450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
177, 19
               

               
Conread position:
               
78-502
               

               
Cow position:
               
chr17:11216212-11215797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 94
               

               
Conread position:
               
78-502
               

               
Cow position:
               
chr17:21960010-21959593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 69
               

               
Conread position:
               
78-503
               

               
Cow position:
               
chr17:39857086-39857486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
389, 73
               

               
Conread position:
               
78-504
               

               
Cow position:
               
chr17:1493488-1493052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 171
               

               
Conread position:
               
78-504
               

               
Cow position:
               
chr17:20083844-20083425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 196
               

               
Conread position:
               
80-358
               

               
Cow position:
               
chr17:32399851-32399566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
81-242
               

               
Cow position:
               
chr17:19765939-19766100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
140, 66
               

               
Conread position:
               
81-245
               

               
Cow position:
               
chr17:18627899-18628060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
81-253
               

               
Cow position:
               
chr17:42258577-42258751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
81-303
               

               
Cow position:
               
chr17:9660606-9660382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
213, 182
               

               
Conread position:
               
81-305
               

               
Cow position:
               
chr17:31310558-31310330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 171
               

               
Conread position:
               
81-379
               

               
Cow position:
               
chr17:39735857-39736152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
196, 166
               

               
Conread position:
               
81-393
               

               
Cow position:
               
chr17:17494012-17494332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
81-397
               

               
Cow position:
               
chr17:5174448-5174124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
134, 195
               

               
Conread position:
               
81-410
               

               
Cow position:
               
chr17:44924504-44924183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
134, 183
               

               
Conread position:
               
81-504
               

               
Cow position:
               
chr17:18592108-18592539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 196
               

               
Conread position:
               
81-504
               

               
Cow position:
               
chr17:36331291-36330861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 64
               

               
Conread position:
               
82-219
               

               
Cow position:
               
chr17:38630449-38630586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
82-504
               

               
Cow position:
               
chr17:11839373-11839819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 128
               

               
Conread position:
               
84-205
               

               
Cow position:
               
chr17:23884094-23883973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
84-222
               

               
Cow position:
               
chr17:19484775-19484636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
84-232
               

               
Cow position:
               
chr17:27938187-27938038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
84-302
               

               
Cow position:
               
chr17:1217914-1217695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
102, 28
               

               
Conread position:
               
84-355
               

               
Cow position:
               
chr17:1463833-1464112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
84-355
               

               
Cow position:
               
chr17:1482026-1482301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 87
               

               
Conread position:
               
84-393
               

               
Cow position:
               
chr17:29824235-29823926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
130, 90
               

               
Conread position:
               
84-452
               

               
Cow position:
               
chr17:29157104-29157461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
199, 135
               

               
Conread position:
               
84-497
               

               
Cow position:
               
chr17:15300190-15299789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 86
               

               
Conread position:
               
84-501
               

               
Cow position:
               
chr17:2034225-2034623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
134, 8
               

               
Conread position:
               
84-504
               

               
Cow position:
               
chr17:11397344-11397763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 127
               

               
Conread position:
               
84-504
               

               
Cow position:
               
chr17:15188401-15187972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
175, 127
               

               
Conread position:
               
85-339
               

               
Cow position:
               
chr17:24983670-24983417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
177, 62
               

               
Conread position:
               
85-390
               

               
Cow position:
               
chr17:37693788-37694097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 191
               

               
Conread position:
               
85-463
               

               
Cow position:
               
chr17:11056701-11056314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
85-493
               

               
Cow position:
               
chr17:21973456-21973045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 136
               

               
Conread position:
               
85-504
               

               
Cow position:
               
chr17:36265558-36265156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
136, 87
               

               
Conread position:
               
86-207
               

               
Cow position:
               
chr17:9906075-9906197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
86-218
               

               
Cow position:
               
chr17:12539202-12539072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 84
               

               
Conread position:
               
86-313
               

               
Cow position:
               
chr17:18070466-18070685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
165, 5
               

               
Conread position:
               
86-461
               

               
Cow position:
               
chr17:5246561-5246945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
90, 198
               

               
Conread position:
               
86-491
               

               
Cow position:
               
chr17:36746636-36746242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
130, 86
               

               
Conread position:
               
87-223
               

               
Cow position:
               
chr17:30816200-30816063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
87-293
               

               
Cow position:
               
chr17:28169225-28169432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
134, 189
               

               
Conread position:
               
87-293
               

               
Cow position:
               
chr17:29919878-29919673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
135, 98
               

               
Conread position:
               
87-350
               

               
Cow position:
               
chr17:3095510-3095773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
129, 5
               

               
Conread position:
               
87-377
               

               
Cow position:
               
chr17:5000900-5000608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
54, 132
               

               
Conread position:
               
87-382
               

               
Cow position:
               
chr17:20226327-20226629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
208, 191
               

               
Conread position:
               
87-403
               

               
Cow position:
               
chr17:20653224-20652905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 165
               

               
Conread position:
               
87-479
               

               
Cow position:
               
chr17:16399120-16398722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
129, 189
               

               
Conread position:
               
89-222
               

               
Cow position:
               
chr17:6180685-6180818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
90-504
               

               
Cow position:
               
chr17:40331451-40331861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
215, 14
               

               
Conread position:
               
91-413
               

               
Cow position:
               
chr17:4606653-4606963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 85
               

               
Conread position:
               
92-191
               

               
Cow position:
               
chr17:21709924-21710023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-211
               

               
Cow position:
               
chr17:20912302-20912421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-214
               

               
Cow position:
               
chr17:10432742-10432622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
92-303
               

               
Cow position:
               
chr17:2274956-2275168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
118, 173
               

               
Conread position:
               
92-303
               

               
Cow position:
               
chr17:22790780-22790993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
163, 142
               

               
Conread position:
               
92-357
               

               
Cow position:
               
chr17:25875091-25875363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
92-410
               

               
Cow position:
               
chr17:3306551-3306870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 73
               

               
Conread position:
               
92-429
               

               
Cow position:
               
chr17:1061376-1061037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
92-460
               

               
Cow position:
               
chr17:30204340-30204712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
123, 34
               

               
Conread position:
               
92-477
               

               
Cow position:
               
chr17:27698010-27697628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
209, 163
               

               
Conread position:
               
92-485
               

               
Cow position:
               
chr17:10473517-10473908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 167
               

               
Conread position:
               
93-220
               

               
Cow position:
               
chr17:4634932-4634806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
93-242
               

               
Cow position:
               
chr17:12024046-12023904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
93-303
               

               
Cow position:
               
chr17:23723560-23723778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 187
               

               
Conread position:
               
93-387
               

               
Cow position:
               
chr17:40421352-40421650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
221, 181
               

               
Conread position:
               
93-504
               

               
Cow position:
               
chr17:10529058-10528631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
93-504
               

               
Cow position:
               
chr17:39790369-39790794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
103, 191
               

               
Conread position:
               
94-204
               

               
Cow position:
               
chr17:21767615-21767725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
94-245
               

               
Cow position:
               
chr17:40393712-40393867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr17:29951227-29951496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
127, 244
               

               
Conread position:
               
94-379
               

               
Cow position:
               
chr17:255760-256052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
127, 92
               

               
Conread position:
               
94-390
               

               
Cow position:
               
chr17:588163-587878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 120
               

               
Conread position:
               
94-393
               

               
Cow position:
               
chr17:40642406-40642099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
95-239
               

               
Cow position:
               
chr17:36313944-36314090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
95-239
               

               
Cow position:
               
chr17:36317999-36318145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
95-244
               

               
Cow position:
               
chr17:31852677-31852825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
95-245
               

               
Cow position:
               
chr17:22135184-22135331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
120, 77
               

               
Conread position:
               
95-246
               

               
Cow position:
               
chr17:28224338-28224186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
95-405
               

               
Cow position:
               
chr17:25900884-25901195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
200, 121
               

               
Conread position:
               
95-486
               

               
Cow position:
               
chr17:11304719-11305112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
93, 180
               

               
Conread position:
               
95-488
               

               
Cow position:
               
chr17:1783921-1783524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
95-504
               

               
Cow position:
               
chr17:38614646-38615057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 15
               

               
Conread position:
               
96-222
               

               
Cow position:
               
chr17:2249766-2249640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
119, 10
               

               
Conread position:
               
96-240
               

               
Cow position:
               
chr17:26771810-26771955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
96-242
               

               
Cow position:
               
chr17:39257328-39257184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
123, 83
               

               
Conread position:
               
96-244
               

               
Cow position:
               
chr17:37153655-37153507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 77
               

               
Conread position:
               
96-293
               

               
Cow position:
               
chr17:3549484-3549279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
65, 171
               

               
Conread position:
               
96-312
               

               
Cow position:
               
chr17:27580357-27580564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
52, 83
               

               
Conread position:
               
96-319
               

               
Cow position:
               
chr17:2520372-2520159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
96-336
               

               
Cow position:
               
chr17:27053457-27053704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
120, 94
               

               
Conread position:
               
96-347
               

               
Cow position:
               
chr17:26174635-26174888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 126
               

               
Conread position:
               
96-367
               

               
Cow position:
               
chr17:14008163-14008447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
121, 223
               

               
Conread position:
               
96-367
               

               
Cow position:
               
chr17:15040719-15040440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
119, 180
               

               
Conread position:
               
96-376
               

               
Cow position:
               
chr17:34079412-34079132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 178
               

               
Conread position:
               
96-382
               

               
Cow position:
               
chr17:17032934-17032640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
119, 180
               

               
Conread position:
               
96-397
               

               
Cow position:
               
chr17:2517153-2516847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
127, 180
               

               
Conread position:
               
96-493
               

               
Cow position:
               
chr17:21293359-21292961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 166
               

               
Conread position:
               
96-504
               

               
Cow position:
               
chr17:14026229-14025813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 156
               

               
Conread position:
               
96-504
               

               
Cow position:
               
chr17:38832730-38833140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
97-232
               

               
Cow position:
               
chr17:26017087-26017222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
77, 89
               

               
Conread position:
               
97-253
               

               
Cow position:
               
chr17:9742785-9742942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
97-344
               

               
Cow position:
               
chr17:33370524-33370273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
119, 175
               

               
Conread position:
               
97-348
               

               
Cow position:
               
chr17:35439782-35439534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
79, 97
               

               
Conread position:
               
97-504
               

               
Cow position:
               
chr17:9117335-9117741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
99-475
               

               
Cow position:
               
chr17:3471104-3471484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
100-379
               

               
Cow position:
               
chr17:20090927-20090652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
119, 6
               

               
Conread position:
               
100-504
               

               
Cow position:
               
chr17:17121367-17121768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 6
               

               
Conread position:
               
101-343
               

               
Cow position:
               
chr17:15187558-15187319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
101-349
               

               
Cow position:
               
chr17:18410834-18410579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
114, 175
               

               
Conread position:
               
101-357
               

               
Cow position:
               
chr17:2730107-2729851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
115, 174
               

               
Conread position:
               
101-382
               

               
Cow position:
               
chr17:22087357-22087646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
114, 175
               

               
Conread position:
               
101-391
               

               
Cow position:
               
chr17:3156598-3156896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
114, 175
               

               
Conread position:
               
101-397
               

               
Cow position:
               
chr17:6065409-6065713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
114, 175
               

               
Conread position:
               
101-418
               

               
Cow position:
               
chr17:21874625-21874294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
101-504
               

               
Cow position:
               
chr17:30718725-30718321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 77
               

               
Conread position:
               
102-239
               

               
Cow position:
               
chr17:4165250-4165389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
102-382
               

               
Cow position:
               
chr17:18337991-18337703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
113, 174
               

               
Conread position:
               
102-397
               

               
Cow position:
               
chr17:10318823-10319126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
113, 174
               

               
Conread position:
               
103-502
               

               
Cow position:
               
chr17:11171489-11171886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 160
               

               
Conread position:
               
105-311
               

               
Cow position:
               
chr17:35457343-35457547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
110, 166
               

               
Conread position:
               
105-349
               

               
Cow position:
               
chr17:13871245-13871496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
110, 171
               

               
Conread position:
               
105-353
               

               
Cow position:
               
chr17:34017273-34017016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
186, 166
               

               
Conread position:
               
105-461
               

               
Cow position:
               
chr17:40892849-40893202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
105-480
               

               
Cow position:
               
chr17:10308317-10307956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
74, 83
               

               
Conread position:
               
105-497
               

               
Cow position:
               
chr17:17405817-17406225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 167
               

               
Conread position:
               
105-504
               

               
Cow position:
               
chr17:30529841-30529448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 143
               

               
Conread position:
               
106-310
               

               
Cow position:
               
chr17:20824629-20824434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
106-356
               

               
Cow position:
               
chr17:7251741-7251999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
107, 39
               

               
Conread position:
               
106-371
               

               
Cow position:
               
chr17:40312428-40312691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
149, 34
               

               
Conread position:
               
106-413
               

               
Cow position:
               
chr17:1295875-1295562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 168
               

               
Conread position:
               
106-504
               

               
Cow position:
               
chr17:2810312-2810729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
106-504
               

               
Cow position:
               
chr17:20889071-20889468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 233
               

               
Conread position:
               
107-308
               

               
Cow position:
               
chr17:7700144-7700345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
105, 165
               

               
Conread position:
               
107-379
               

               
Cow position:
               
chr17:15985056-15985322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
198, 46
               

               
Conread position:
               
108-382
               

               
Cow position:
               
chr17:15910252-15910532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
108-483
               

               
Cow position:
               
chr17:25181448-25181068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
109-243
               

               
Cow position:
               
chr17:18146026-18145890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
109-356
               

               
Cow position:
               
chr17:43008417-43008672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
109-382
               

               
Cow position:
               
chr17:6801320-6801039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 241
               

               
Conread position:
               
109-406
               

               
Cow position:
               
chr17:20874024-20874310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 30
               

               
Conread position:
               
110-222
               

               
Cow position:
               
chr17:7647229-7647342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
110-410
               

               
Cow position:
               
chr17:24973650-24973954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 228
               

               
Conread position:
               
110-475
               

               
Cow position:
               
chr17:1080703-1081058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 136
               

               
Conread position:
               
110-504
               

               
Cow position:
               
chr17:5224103-5224496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 164
               

               
Conread position:
               
111-504
               

               
Cow position:
               
chr17:15664370-15664774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 153
               

               
Conread position:
               
112-466
               

               
Cow position:
               
chr17:21313113-21312752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 172
               

               
Conread position:
               
112-500
               

               
Cow position:
               
chr17:5688645-5688268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
113-341
               

               
Cow position:
               
chr17:4339353-4339121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
104, 163
               

               
Conread position:
               
114-334
               

               
Cow position:
               
chr17:27069188-27069410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
103, 77
               

               
Conread position:
               
114-410
               

               
Cow position:
               
chr17:12216367-12216070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
115-290
               

               
Cow position:
               
chr17:15352779-15352945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
117-356
               

               
Cow position:
               
chr17:15225854-15225610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
104, 55
               

               
Conread position:
               
117-382
               

               
Cow position:
               
chr17:43324511-43324238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 159
               

               
Conread position:
               
117-477
               

               
Cow position:
               
chr17:5330280-5330654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 161
               

               
Conread position:
               
119-393
               

               
Cow position:
               
chr17:16869568-16869294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
93, 155
               

               
Conread position:
               
122-355
               

               
Cow position:
               
chr17:31122886-31122645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
93, 142
               

               
Conread position:
               
124-319
               

               
Cow position:
               
chr17:4085419-4085611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
124-392
               

               
Cow position:
               
chr17:16448048-16448324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
165, 69
               

               
Conread position:
               
124-504
               

               
Cow position:
               
chr17:18720730-18720350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 44
               

               
Conread position:
               
125-308
               

               
Cow position:
               
chr17:4752603-4752781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
125-369
               

               
Cow position:
               
chr17:10634343-10634094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
31, 148
               

               
Conread position:
               
125-504
               

               
Cow position:
               
chr17:19891332-19891721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
126-485
               

               
Cow position:
               
chr17:4612362-4612005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
126-504
               

               
Cow position:
               
chr17:18109370-18108990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
91, 149
               

               
Conread position:
               
128-242
               

               
Cow position:
               
chr17:5870905-5871021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
128-397
               

               
Cow position:
               
chr17:30059706-30059983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
87, 148
               

               
Conread position:
               
128-476
               

               
Cow position:
               
chr17:13425314-13425655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
180, 75
               

               
Conread position:
               
129-479
               

               
Cow position:
               
chr17:14243889-14244245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
92, 280
               

               
Conread position:
               
131-367
               

               
Cow position:
               
chr17:12054441-12054682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
172, 142
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr17:21620436-21620797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
83, 283
               

               
Conread position:
               
132-504
               

               
Cow position:
               
chr17:8544030-8544403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 88
               

               
Conread position:
               
134-401
               

               
Cow position:
               
chr17:37163805-37163526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
134-497
               

               
Cow position:
               
chr17:22032959-22032608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 113
               

               
Conread position:
               
135-495
               

               
Cow position:
               
chr17:8832378-8832036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
136-485
               

               
Cow position:
               
chr17:9568061-9567713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
85, 140
               

               
Conread position:
               
137-369
               

               
Cow position:
               
chr17:26818725-26818487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
117, 202
               

               
Conread position:
               
137-404
               

               
Cow position:
               
chr17:7041210-7040949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
137-504
               

               
Cow position:
               
chr17:11278295-11277931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
138-411
               

               
Cow position:
               
chr17:10790041-10790320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 20
               

               
Conread position:
               
138-412
               

               
Cow position:
               
chr17:17950971-17951247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
77, 136
               

               
Conread position:
               
138-413
               

               
Cow position:
               
chr17:20126349-20126619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
117, 78
               

               
Conread position:
               
138-502
               

               
Cow position:
               
chr17:7760742-7760378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
143-233
               

               
Cow position:
               
chr17:21911137-21911047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
143-303
               

               
Cow position:
               
chr17:6997823-6997982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
152, 130
               

               
Conread position:
               
143-379
               

               
Cow position:
               
chr17:14051369-14051125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
143-391
               

               
Cow position:
               
chr17:37161148-37161398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
69, 80
               

               
Conread position:
               
143-504
               

               
Cow position:
               
chr17:25796607-25796240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 272
               

               
Conread position:
               
144-382
               

               
Cow position:
               
chr17:16292117-16291870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
106, 77
               

               
Conread position:
               
144-502
               

               
Cow position:
               
chr17:8079051-8079407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
77, 103
               

               
Conread position:
               
145-472
               

               
Cow position:
               
chr17:42347486-42347160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 127
               

               
Conread position:
               
146-493
               

               
Cow position:
               
chr17:11296374-11296734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
147-379
               

               
Cow position:
               
chr17:9950696-9950925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 129
               

               
Conread position:
               
149-375
               

               
Cow position:
               
chr17:21115206-21114982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
157-379
               

               
Cow position:
               
chr17:17059187-17059404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
138, 106
               

               
Conread position:
               
158-392
               

               
Cow position:
               
chr17:24876885-24877128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
158-409
               

               
Cow position:
               
chr17:5380717-5380973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
158-504
               

               
Cow position:
               
chr17:29363614-29363264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
5, 33
               

               
Conread position:
               
159-504
               

               
Cow position:
               
chr17:21004082-21003732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 180
               

               
Conread position:
               
160-463
               

               
Cow position:
               
chr17:21031538-21031842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
145, 60
               

               
Conread position:
               
162-379
               

               
Cow position:
               
chr17:21244041-21243811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
163-410
               

               
Cow position:
               
chr17:18495754-18495518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
164-502
               

               
Cow position:
               
chr17:16371004-16371351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 260
               

               
Conread position:
               
164-504
               

               
Cow position:
               
chr17:553210-552873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
91, 47
               

               
Conread position:
               
167-472
               

               
Cow position:
               
chr17:9079431-9079142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 92
               

               
Conread position:
               
167-475
               

               
Cow position:
               
chr17:20839800-20839501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
138, 9
               

               
Conread position:
               
170-474
               

               
Cow position:
               
chr17:1526593-1526287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
131, 51
               

               
Conread position:
               
172-502
               

               
Cow position:
               
chr17:11664826-11664490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
175-503
               

               
Cow position:
               
chr17:14848757-14848446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
177-379
               

               
Cow position:
               
chr17:3258265-3258468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
127, 8
               

               
Conread position:
               
177-477
               

               
Cow position:
               
chr17:33999277-33998982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
180-504
               

               
Cow position:
               
chr17:15684275-15684607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
49, 237
               

               
Conread position:
               
181-365
               

               
Cow position:
               
chr17:27162423-27162613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
35, 94
               

               
Conread position:
               
181-410
               

               
Cow position:
               
chr17:21017565-21017799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
181-502
               

               
Cow position:
               
chr17:39012489-39012812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
183-493
               

               
Cow position:
               
chr17:7132680-7132355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
183-504
               

               
Cow position:
               
chr17:5423298-5422972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
183-504
               

               
Cow position:
               
chr17:6423536-6423861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
183-504
               

               
Cow position:
               
chr17:7697829-7698144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
183-504
               

               
Cow position:
               
chr17:9746294-9746609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
96, 38
               

               
Conread position:
               
183-504
               

               
Cow position:
               
chr17:17410071-17410390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
184-379
               

               
Cow position:
               
chr17:1359023-1358828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
184-468
               

               
Cow position:
               
chr17:33403166-33402878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
38, 124
               

               
Conread position:
               
184-472
               

               
Cow position:
               
chr17:9778025-9778305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
184-478
               

               
Cow position:
               
chr17:24761449-24761158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
184-483
               

               
Cow position:
               
chr17:34948416-34948713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
184-490
               

               
Cow position:
               
chr17:20215946-20216250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
122, 87
               

               
Conread position:
               
184-493
               

               
Cow position:
               
chr17:38363208-38362898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
184-497
               

               
Cow position:
               
chr17:6624030-6624342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
8, 95
               

               
Conread position:
               
184-501
               

               
Cow position:
               
chr17:1020793-1020467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
184-504
               

               
Cow position:
               
chr17:24587392-24587721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 156
               

               
Conread position:
               
184-504
               

               
Cow position:
               
chr17:36275131-36275430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
186-379
               

               
Cow position:
               
chr17:30999552-30999745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
186-504
               

               
Cow position:
               
chr17:27047941-27048252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
187-501
               

               
Cow position:
               
chr17:41290240-41289932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
103, 76
               

               
Conread position:
               
188-413
               

               
Cow position:
               
chr17:19756123-19755893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 149
               

               
Conread position:
               
188-503
               

               
Cow position:
               
chr17:20870315-20870002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
190-393
               

               
Cow position:
               
chr17:20835373-20835583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 154
               

               
Conread position:
               
191-482
               

               
Cow position:
               
chr17:18245856-18246155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
192-400
               

               
Cow position:
               
chr17:33052645-33052853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
193-392
               

               
Cow position:
               
chr17:3182801-3182599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
61, 91
               

               
Conread position:
               
193-410
               

               
Cow position:
               
chr17:25128566-25128346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
193-448
               

               
Cow position:
               
chr17:4473020-4472777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
193-502
               

               
Cow position:
               
chr17:2662192-2662517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 240
               

               
Conread position:
               
193-504
               

               
Cow position:
               
chr17:8837158-8836851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
193-504
               

               
Cow position:
               
chr17:11156710-11156397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 147
               

               
Conread position:
               
193-504
               

               
Cow position:
               
chr17:21739101-21738777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
28, 241
               

               
Conread position:
               
194-463
               

               
Cow position:
               
chr17:18884563-18884275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
194-504
               

               
Cow position:
               
chr17:25097247-25097552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
111, 142
               

               
Conread position:
               
195-405
               

               
Cow position:
               
chr17:22781477-22781690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
195-479
               

               
Cow position:
               
chr17:23245997-23246279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
196-393
               

               
Cow position:
               
chr17:1328184-1327984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 77
               

               
Conread position:
               
196-504
               

               
Cow position:
               
chr17:21628269-21628575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
198-504
               

               
Cow position:
               
chr17:40741435-40741749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 113
               

               
Conread position:
               
200-400
               

               
Cow position:
               
chr17:966949-966745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
200-460
               

               
Cow position:
               
chr17:27765071-27765323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
200-475
               

               
Cow position:
               
chr17:11361973-11362250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
200-504
               

               
Cow position:
               
chr17:20932126-20932428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
201-503
               

               
Cow position:
               
chr17:32279116-32278810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
201-504
               

               
Cow position:
               
chr17:38646859-38647158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
204-481
               

               
Cow position:
               
chr17:20912692-20912961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
204-503
               

               
Cow position:
               
chr17:1035810-1035501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
209-504
               

               
Cow position:
               
chr17:12108603-12108901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
212-463
               

               
Cow position:
               
chr17:21697535-21697786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
43, 210
               

               
Conread position:
               
213-504
               

               
Cow position:
               
chr17:9911566-9911854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 125
               

               
Conread position:
               
214-504
               

               
Cow position:
               
chr17:21434924-21434634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 125
               

               
Conread position:
               
215-478
               

               
Cow position:
               
chr17:32950078-32950345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
39, 212
               

               
Conread position:
               
215-504
               

               
Cow position:
               
chr17:25999922-26000214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 59
               

               
Conread position:
               
216-504
               

               
Cow position:
               
chr17:37480186-37479905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
225-503
               

               
Cow position:
               
chr17:908562-908836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
227-494
               

               
Cow position:
               
chr17:36203672-36203395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
229-484
               

               
Cow position:
               
chr17:34208000-34207741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
232-504
               

               
Cow position:
               
chr17:24149000-24149281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 42
               

               
Conread position:
               
260-410
               

               
Cow position:
               
chr17:43633964-43634110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
260-460
               

               
Cow position:
               
chr17:10459095-10458886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 84
               

               
Conread position:
               
260-461
               

               
Cow position:
               
chr17:30734438-30734243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
264-479
               

               
Cow position:
               
chr17:17267034-17266820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
197, 19
               

               
Conread position:
               
267-458
               

               
Cow position:
               
chr17:5382138-5381946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 153
               

               
Conread position:
               
268-504
               

               
Cow position:
               
chr17:7654595-7654355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
273-504
               

               
Cow position:
               
chr17:20874249-20874493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 163
               

               
Conread position:
               
278-479
               

               
Cow position:
               
chr17:1353264-1353466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 129
               

               
Conread position:
               
278-504
               

               
Cow position:
               
chr17:7142732-7142958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
278-504
               

               
Cow position:
               
chr17:14060908-14060677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
28, 145
               

               
Conread position:
               
278-504
               

               
Cow position:
               
chr17:18146050-18146282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 148
               

               
Conread position:
               
278-504
               

               
Cow position:
               
chr17:24928347-24928572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
280-504
               

               
Cow position:
               
chr17:6848675-6848891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
280-504
               

               
Cow position:
               
chr17:27184070-27183846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
283-460
               

               
Cow position:
               
chr17:11921409-11921224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
283-479
               

               
Cow position:
               
chr17:17683025-17682833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
284-479
               

               
Cow position:
               
chr17:267714-267514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
284-504
               

               
Cow position:
               
chr17:20884397-20884620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
284-504
               

               
Cow position:
               
chr17:24559173-24559387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
168, 18
               

               
Conread position:
               
285-503
               

               
Cow position:
               
chr17:32280544-32280762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 49
               

               
Conread position:
               
285-504
               

               
Cow position:
               
chr17:1113760-1113985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 130
               

               
Conread position:
               
285-504
               

               
Cow position:
               
chr17:6328987-6329212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
287-504
               

               
Cow position:
               
chr17:25501993-25502207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
289-477
               

               
Cow position:
               
chr17:12591046-12591236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
289-493
               

               
Cow position:
               
chr17:25916775-25916980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
296-461
               

               
Cow position:
               
chr17:2839801-2839960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
296-500
               

               
Cow position:
               
chr17:23798168-23798374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 37
               

               
Conread position:
               
301-456
               

               
Cow position:
               
chr17:1505206-1505359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
306-413
               

               
Cow position:
               
chr17:9936137-9936033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
306-504
               

               
Cow position:
               
chr17:11215329-11215135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
306-504
               

               
Cow position:
               
chr17:11832219-11832018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
115, 75
               

               
Conread position:
               
314-504
               

               
Cow position:
               
chr17:14652872-14652683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
314-504
               

               
Cow position:
               
chr17:21489716-21489528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
180, 103
               

               
Conread position:
               
316-504
               

               
Cow position:
               
chr17:2275384-2275567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
317-504
               

               
Cow position:
               
chr17:25342829-25342644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
155, 98
               

               
Conread position:
               
318-491
               

               
Cow position:
               
chr17:38990016-38990181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
151, 8
               

               
Conread position:
               
318-504
               

               
Cow position:
               
chr17:15376521-15376691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
176, 14
               

               
Conread position:
               
318-504
               

               
Cow position:
               
chr17:27203132-27202949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
152, 94
               

               
Conread position:
               
327-479
               

               
Cow position:
               
chr17:1466509-1466357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
141, 88
               

               
Conread position:
               
327-490
               

               
Cow position:
               
chr17:1469297-1469461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
327-504
               

               
Cow position:
               
chr17:39715079-39715257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
136, 19
               

               
Conread position:
               
329-504
               

               
Cow position:
               
chr17:29025990-29026169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
329-504
               

               
Cow position:
               
chr17:31856593-31856770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
140, 86
               

               
Conread position:
               
334-504
               

               
Cow position:
               
chr17:36814287-36814458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
149, 88
               

               
Conread position:
               
341-504
               

               
Cow position:
               
chr17:4683281-4683446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 76
               
Show alignments to all cow chromosomes.