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Cow genome map

           
Conread name:
           
Ss1.1-rret24_f24.5
        

               
Conread position:
               
48-218
               

               
Cow position:
               
chr25:16316394-16316559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
48-221
               

               
Cow position:
               
chr25:14284172-14284000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
48-504
               

               
Cow position:
               
chr25:13569567-13569122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 15
               

               
Conread position:
               
49-457
               

               
Cow position:
               
chr25:14225195-14224799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
52-229
               

               
Cow position:
               
chr25:27510655-27510480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
144, 8
               

               
Conread position:
               
55-329
               

               
Cow position:
               
chr25:38569988-38569718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
210, 13
               

               
Conread position:
               
56-479
               

               
Cow position:
               
chr25:7641842-7641423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
160, 26
               

               
Conread position:
               
56-504
               

               
Cow position:
               
chr25:25754389-25753942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 26
               

               
Conread position:
               
57-375
               

               
Cow position:
               
chr25:22530896-22531210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 22
               

               
Conread position:
               
58-379
               

               
Cow position:
               
chr25:6226660-6226973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
65-472
               

               
Cow position:
               
chr25:5792187-5791781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
249, 20
               

               
Conread position:
               
66-344
               

               
Cow position:
               
chr25:28327482-28327199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 161
               

               
Conread position:
               
67-220
               

               
Cow position:
               
chr25:21017858-21017705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
68-183
               

               
Cow position:
               
chr25:35048047-35047932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
68-242
               

               
Cow position:
               
chr25:32606897-32606723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
112, 14
               

               
Conread position:
               
68-355
               

               
Cow position:
               
chr25:17659172-17659472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
68-380
               

               
Cow position:
               
chr25:18448453-18448770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 116
               

               
Conread position:
               
68-393
               

               
Cow position:
               
chr25:26757044-26757380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 192
               

               
Conread position:
               
68-402
               

               
Cow position:
               
chr25:5341269-5341605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
192, 14
               

               
Conread position:
               
68-486
               

               
Cow position:
               
chr25:24136828-24136402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 213
               

               
Conread position:
               
68-504
               

               
Cow position:
               
chr25:10504720-10504287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
88, 13
               

               
Conread position:
               
68-504
               

               
Cow position:
               
chr25:26087133-26087573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 13
               

               
Conread position:
               
69-380
               

               
Cow position:
               
chr25:26911140-26910827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
147, 207
               

               
Conread position:
               
70-362
               

               
Cow position:
               
chr25:15273307-15273601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
146, 160
               

               
Conread position:
               
72-220
               

               
Cow position:
               
chr25:39386212-39386064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
72-244
               

               
Cow position:
               
chr25:23013832-23014014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
110, 61
               

               
Conread position:
               
72-310
               

               
Cow position:
               
chr25:23829489-23829268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
144, 11
               

               
Conread position:
               
73-355
               

               
Cow position:
               
chr25:6606737-6606453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
139, 14
               

               
Conread position:
               
74-354
               

               
Cow position:
               
chr25:4897719-4898003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
147, 9
               

               
Conread position:
               
75-190
               

               
Cow position:
               
chr25:12081731-12081616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
75-204
               

               
Cow position:
               
chr25:11826883-11826753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
75-223
               

               
Cow position:
               
chr25:29802117-29801968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
75-319
               

               
Cow position:
               
chr25:16136778-16137022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
149, 158
               

               
Conread position:
               
75-369
               

               
Cow position:
               
chr25:23945892-23945591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
172, 123
               

               
Conread position:
               
75-382
               

               
Cow position:
               
chr25:7608940-7609255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
140, 201
               

               
Conread position:
               
75-480
               

               
Cow position:
               
chr25:20496162-20496561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
75-504
               

               
Cow position:
               
chr25:18160936-18161341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
177, 7
               

               
Conread position:
               
75-504
               

               
Cow position:
               
chr25:41107384-41107808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 7
               

               
Conread position:
               
76-190
               

               
Cow position:
               
chr25:35612710-35612594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
76-192
               

               
Cow position:
               
chr25:18310395-18310510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
76-202
               

               
Cow position:
               
chr25:15452896-15452770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-204
               

               
Cow position:
               
chr25:2595612-2595740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-204
               

               
Cow position:
               
chr25:34508553-34508425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-204
               

               
Cow position:
               
chr25:41121632-41121760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-205
               

               
Cow position:
               
chr25:16841047-16840919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
76-205
               

               
Cow position:
               
chr25:34000308-34000437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-207
               

               
Cow position:
               
chr25:22712058-22712189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-208
               

               
Cow position:
               
chr25:4401759-4401627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-210
               

               
Cow position:
               
chr25:9595939-9596070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
123, 96
               

               
Conread position:
               
76-210
               

               
Cow position:
               
chr25:19570773-19570640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
76-211
               

               
Cow position:
               
chr25:15429051-15428916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-211
               

               
Cow position:
               
chr25:23325380-23325245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-214
               

               
Cow position:
               
chr25:14755794-14755658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
76-218
               

               
Cow position:
               
chr25:12176575-12176433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-218
               

               
Cow position:
               
chr25:16802066-16802211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
76-218
               

               
Cow position:
               
chr25:18023387-18023526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
132, 79
               

               
Conread position:
               
76-219
               

               
Cow position:
               
chr25:4857869-4857726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-219
               

               
Cow position:
               
chr25:23913103-23912963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
76-220
               

               
Cow position:
               
chr25:14118378-14118522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-220
               

               
Cow position:
               
chr25:41097570-41097424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:5020-5167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:10158370-10158517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:16688626-16688480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
139, 13
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:17426881-17427028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:17993895-17993748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:18044877-18044730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:18658528-18658674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
139, 119
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:20652349-20652202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:26756096-26756243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:26939995-26940142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:29559643-29559790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:32514219-32514072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:33589780-33589633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
76-222
               

               
Cow position:
               
chr25:33901754-33901607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-223
               

               
Cow position:
               
chr25:27231962-27232106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
76-224
               

               
Cow position:
               
chr25:11044266-11044415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
76-226
               

               
Cow position:
               
chr25:20207761-20207902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
141, 62
               

               
Conread position:
               
76-228
               

               
Cow position:
               
chr25:6118217-6118066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
76-239
               

               
Cow position:
               
chr25:37254573-37254732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
76-241
               

               
Cow position:
               
chr25:13553536-13553701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
138, 155
               

               
Conread position:
               
76-242
               

               
Cow position:
               
chr25:15005829-15005993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
145, 96
               

               
Conread position:
               
76-242
               

               
Cow position:
               
chr25:17119562-17119395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
76-244
               

               
Cow position:
               
chr25:32278406-32278237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
76-245
               

               
Cow position:
               
chr25:11315251-11315421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
76-245
               

               
Cow position:
               
chr25:17191507-17191338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
140, 102
               

               
Conread position:
               
76-248
               

               
Cow position:
               
chr25:26896664-26896835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
142, 6
               

               
Conread position:
               
76-249
               

               
Cow position:
               
chr25:21041444-21041617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
141, 66
               

               
Conread position:
               
76-287
               

               
Cow position:
               
chr25:7069149-7069351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
76-287
               

               
Cow position:
               
chr25:14255185-14255390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
189, 73
               

               
Conread position:
               
76-305
               

               
Cow position:
               
chr25:4860824-4860595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
68, 200
               

               
Conread position:
               
76-308
               

               
Cow position:
               
chr25:11294416-11294650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
112, 171
               

               
Conread position:
               
76-308
               

               
Cow position:
               
chr25:18240776-18241008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
145, 200
               

               
Conread position:
               
76-309
               

               
Cow position:
               
chr25:29336114-29336345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
106, 50
               

               
Conread position:
               
76-310
               

               
Cow position:
               
chr25:5461798-5462030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
138, 200
               

               
Conread position:
               
76-310
               

               
Cow position:
               
chr25:34156297-34156528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
76-312
               

               
Cow position:
               
chr25:26187908-26187675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
145, 200
               

               
Conread position:
               
76-319
               

               
Cow position:
               
chr25:17994669-17994435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
219, 146
               

               
Conread position:
               
76-330
               

               
Cow position:
               
chr25:4488359-4488610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
137, 93
               

               
Conread position:
               
76-332
               

               
Cow position:
               
chr25:11056501-11056745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
76-342
               

               
Cow position:
               
chr25:36871482-36871753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
145, 267
               

               
Conread position:
               
76-344
               

               
Cow position:
               
chr25:24654546-24654274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
145, 259
               

               
Conread position:
               
76-349
               

               
Cow position:
               
chr25:3167556-3167276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-353
               

               
Cow position:
               
chr25:27593925-27594205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
76-355
               

               
Cow position:
               
chr25:8231259-8230976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
154, 200
               

               
Conread position:
               
76-355
               

               
Cow position:
               
chr25:8572247-8571960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
140, 210
               

               
Conread position:
               
76-355
               

               
Cow position:
               
chr25:13787574-13787860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
148, 157
               

               
Conread position:
               
76-355
               

               
Cow position:
               
chr25:18323730-18323443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
76-356
               

               
Cow position:
               
chr25:34013130-34012843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
76-356
               

               
Cow position:
               
chr25:34502058-34501775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
208, 146
               

               
Conread position:
               
76-365
               

               
Cow position:
               
chr25:10011096-10010803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
197, 111
               

               
Conread position:
               
76-365
               

               
Cow position:
               
chr25:21209323-21209029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
145, 101
               

               
Conread position:
               
76-367
               

               
Cow position:
               
chr25:14954402-14954104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
145, 180
               

               
Conread position:
               
76-367
               

               
Cow position:
               
chr25:26849425-26849125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
76-367
               

               
Cow position:
               
chr25:34343275-34342976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
76-367
               

               
Cow position:
               
chr25:41356174-41355875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
76-369
               

               
Cow position:
               
chr25:2110708-2110996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 21
               

               
Conread position:
               
76-369
               

               
Cow position:
               
chr25:26682188-26682489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
76-369
               

               
Cow position:
               
chr25:30279585-30279285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
136, 189
               

               
Conread position:
               
76-377
               

               
Cow position:
               
chr25:8655918-8656227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-379
               

               
Cow position:
               
chr25:6021593-6021900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
178, 135
               

               
Conread position:
               
76-379
               

               
Cow position:
               
chr25:8482690-8482378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
76-379
               

               
Cow position:
               
chr25:19339436-19339746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-380
               

               
Cow position:
               
chr25:5537025-5536713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-380
               

               
Cow position:
               
chr25:12208114-12208426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-380
               

               
Cow position:
               
chr25:12943402-12943090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-380
               

               
Cow position:
               
chr25:29383704-29383392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:3689038-3689352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:7717568-7717880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:8235617-8235303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:12157506-12157820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:12753288-12752980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:13067359-13067045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:13840493-13840180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
178, 25
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:15412649-15412963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:16560967-16560659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
232, 140
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:18090545-18090860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:27143309-27142994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:28272938-28273252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:32609791-32609477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:34121465-34121151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
136, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:35554297-35554620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
81, 211
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:35589698-35590012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:35649461-35649775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:36127276-36126962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-382
               

               
Cow position:
               
chr25:36351367-36351681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
219, 199
               

               
Conread position:
               
76-385
               

               
Cow position:
               
chr25:14274064-14274381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
76-386
               

               
Cow position:
               
chr25:41385483-41385166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
108, 189
               

               
Conread position:
               
76-387
               

               
Cow position:
               
chr25:18885857-18885545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
208, 146
               

               
Conread position:
               
76-390
               

               
Cow position:
               
chr25:12318216-12317894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-390
               

               
Cow position:
               
chr25:21121208-21121530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-390
               

               
Cow position:
               
chr25:27531642-27531334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
117, 35
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr25:3140929-3141254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr25:6740444-6740759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
239, 16
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr25:9414751-9415076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr25:13955761-13955436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr25:21193320-21192991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 197
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr25:26923472-26923797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
76-395
               

               
Cow position:
               
chr25:20771710-20771383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
76-396
               

               
Cow position:
               
chr25:28274820-28274502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
232, 145
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:10896104-10895775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:17808154-17807825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:19138944-19138615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:19586711-19586382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:22198210-22198539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:23601315-23600986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:25510518-25510844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
145, 101
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:25873364-25873035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:26319369-26319698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:27076686-27077015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:27146060-27146394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 205
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:28863498-28863827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
145, 203
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:29525239-29524910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:34257611-34257940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:34659481-34659153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
76-397
               

               
Cow position:
               
chr25:35602055-35602384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-399
               

               
Cow position:
               
chr25:35446569-35446887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
142, 120
               

               
Conread position:
               
76-402
               

               
Cow position:
               
chr25:30852397-30852704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
76-405
               

               
Cow position:
               
chr25:13333049-13333380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
76-405
               

               
Cow position:
               
chr25:24727162-24726826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
145, 52
               

               
Conread position:
               
76-410
               

               
Cow position:
               
chr25:2135987-2136313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
226, 66
               

               
Conread position:
               
76-410
               

               
Cow position:
               
chr25:22314824-22315158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
141, 198
               

               
Conread position:
               
76-413
               

               
Cow position:
               
chr25:1096200-1096534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
140, 209
               

               
Conread position:
               
76-413
               

               
Cow position:
               
chr25:6891904-6891562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 180
               

               
Conread position:
               
76-413
               

               
Cow position:
               
chr25:9634554-9634870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
76-413
               

               
Cow position:
               
chr25:16409109-16408764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
209, 199
               

               
Conread position:
               
76-423
               

               
Cow position:
               
chr25:26618076-26618432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-425
               

               
Cow position:
               
chr25:26282653-26282998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
179, 112
               

               
Conread position:
               
76-461
               

               
Cow position:
               
chr25:5514633-5515022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 6
               

               
Conread position:
               
76-461
               

               
Cow position:
               
chr25:12824406-12824009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 176
               

               
Conread position:
               
76-463
               

               
Cow position:
               
chr25:16738318-16737925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
144, 91
               

               
Conread position:
               
76-465
               

               
Cow position:
               
chr25:10012430-10012032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
120, 67
               

               
Conread position:
               
76-471
               

               
Cow position:
               
chr25:19912918-19912517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-472
               

               
Cow position:
               
chr25:15618324-15618724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
136, 200
               

               
Conread position:
               
76-476
               

               
Cow position:
               
chr25:14555296-14555702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-478
               

               
Cow position:
               
chr25:5539045-5539449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 200
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr25:13960690-13961094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
151, 111
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr25:16067886-16068291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr25:18181741-18182145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
140, 27
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr25:34163933-34163530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
139, 109
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr25:34672967-34672563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
140, 16
               

               
Conread position:
               
76-479
               

               
Cow position:
               
chr25:36392340-36391925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
145, 52
               

               
Conread position:
               
76-480
               

               
Cow position:
               
chr25:20650890-20651305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
174, 41
               

               
Conread position:
               
76-480
               

               
Cow position:
               
chr25:36779119-36779530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 348
               

               
Conread position:
               
76-483
               

               
Cow position:
               
chr25:12235130-12234729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
139, 28
               

               
Conread position:
               
76-492
               

               
Cow position:
               
chr25:8576323-8576735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
106, 66
               

               
Conread position:
               
76-497
               

               
Cow position:
               
chr25:2046928-2046513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
72, 82
               

               
Conread position:
               
76-497
               

               
Cow position:
               
chr25:6464405-6463982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 74
               

               
Conread position:
               
76-498
               

               
Cow position:
               
chr25:1735687-1735273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 116
               

               
Conread position:
               
76-502
               

               
Cow position:
               
chr25:10407795-10407362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 305
               

               
Conread position:
               
76-502
               

               
Cow position:
               
chr25:11437179-11436755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 198
               

               
Conread position:
               
76-502
               

               
Cow position:
               
chr25:13325225-13325632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
136, 117
               

               
Conread position:
               
76-502
               

               
Cow position:
               
chr25:17598869-17598442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
76-502
               

               
Cow position:
               
chr25:20076122-20076549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 27
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr25:3145469-3145898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 173
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr25:9349634-9349229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 174
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr25:11585136-11585572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 57
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr25:11956450-11956858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
378, 135
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr25:12171088-12171512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
187, 96
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr25:20069350-20069768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 34
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr25:21191113-21191543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
143, 95
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr25:27868434-27868864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
232, 71
               

               
Conread position:
               
76-504
               

               
Cow position:
               
chr25:37594021-37594460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
114, 215
               

               
Conread position:
               
77-176
               

               
Cow position:
               
chr25:13736781-13736682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-184
               

               
Cow position:
               
chr25:29312683-29312576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-192
               

               
Cow position:
               
chr25:18012982-18013097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-204
               

               
Cow position:
               
chr25:11540737-11540864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-205
               

               
Cow position:
               
chr25:18487100-18487228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-205
               

               
Cow position:
               
chr25:28188360-28188234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
49, 98
               

               
Conread position:
               
77-207
               

               
Cow position:
               
chr25:40906652-40906522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-210
               

               
Cow position:
               
chr25:6988213-6988080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-217
               

               
Cow position:
               
chr25:39313266-39313124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
77-226
               

               
Cow position:
               
chr25:35077037-35076887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
77-228
               

               
Cow position:
               
chr25:5604615-5604465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
77-228
               

               
Cow position:
               
chr25:13429500-13429349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
77-242
               

               
Cow position:
               
chr25:32824006-32823841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
139, 129
               

               
Conread position:
               
77-245
               

               
Cow position:
               
chr25:17992517-17992348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
77-247
               

               
Cow position:
               
chr25:14720109-14720278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
77-252
               

               
Cow position:
               
chr25:30267992-30268168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
77-253
               

               
Cow position:
               
chr25:36962368-36962188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
77-312
               

               
Cow position:
               
chr25:33687274-33687032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
77-321
               

               
Cow position:
               
chr25:25480008-25479755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
110, 141
               

               
Conread position:
               
77-335
               

               
Cow position:
               
chr25:13720916-13720653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr25:4049659-4049928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
138, 54
               

               
Conread position:
               
77-352
               

               
Cow position:
               
chr25:5271211-5271496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
140, 197
               

               
Conread position:
               
77-353
               

               
Cow position:
               
chr25:17682151-17681870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 196
               

               
Conread position:
               
77-355
               

               
Cow position:
               
chr25:29198954-29199235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
110, 183
               

               
Conread position:
               
77-365
               

               
Cow position:
               
chr25:16430398-16430116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
231, 108
               

               
Conread position:
               
77-367
               

               
Cow position:
               
chr25:2414461-2414736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
227, 95
               

               
Conread position:
               
77-367
               

               
Cow position:
               
chr25:12359831-12360128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
77-367
               

               
Cow position:
               
chr25:36765672-36765381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
5, 165
               

               
Conread position:
               
77-379
               

               
Cow position:
               
chr25:4522193-4521907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
77-379
               

               
Cow position:
               
chr25:8120401-8120710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 263
               

               
Conread position:
               
77-379
               

               
Cow position:
               
chr25:9396079-9396380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 127
               

               
Conread position:
               
77-380
               

               
Cow position:
               
chr25:9641968-9642286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
103, 142
               

               
Conread position:
               
77-393
               

               
Cow position:
               
chr25:20060404-20060083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 95
               

               
Conread position:
               
77-411
               

               
Cow position:
               
chr25:394981-395314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
122, 94
               

               
Conread position:
               
77-413
               

               
Cow position:
               
chr25:33839012-33839343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 171
               

               
Conread position:
               
77-456
               

               
Cow position:
               
chr25:12204093-12204479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 188
               

               
Conread position:
               
77-456
               

               
Cow position:
               
chr25:26938632-26938231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 81
               

               
Conread position:
               
77-460
               

               
Cow position:
               
chr25:36124324-36124692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 61
               

               
Conread position:
               
77-462
               

               
Cow position:
               
chr25:23389648-23389267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 95
               

               
Conread position:
               
77-475
               

               
Cow position:
               
chr25:17658239-17658633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 195
               

               
Conread position:
               
77-476
               

               
Cow position:
               
chr25:15319554-15319945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
77-479
               

               
Cow position:
               
chr25:13446293-13445888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
139, 17
               

               
Conread position:
               
77-479
               

               
Cow position:
               
chr25:14791380-14791785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 99
               

               
Conread position:
               
77-479
               

               
Cow position:
               
chr25:22412855-22412450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
136, 200
               

               
Conread position:
               
77-479
               

               
Cow position:
               
chr25:25827085-25827499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 140
               

               
Conread position:
               
77-494
               

               
Cow position:
               
chr25:18000903-18000486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
105, 147
               

               
Conread position:
               
77-497
               

               
Cow position:
               
chr25:26654532-26654954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 49
               

               
Conread position:
               
77-502
               

               
Cow position:
               
chr25:10643682-10643257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 27
               

               
Conread position:
               
77-502
               

               
Cow position:
               
chr25:20394831-20395241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
77-502
               

               
Cow position:
               
chr25:21950750-21951182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 187
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr25:787897-788313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr25:7216446-7216878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 185
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr25:16866862-16867292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 64
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr25:20007745-20008187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 183
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr25:20403095-20402655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 360
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr25:24572696-24573119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
113, 189
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr25:26225413-26224975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
228, 28
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr25:30319825-30319400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 197
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr25:33664272-33663851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
77-504
               

               
Cow position:
               
chr25:36761740-36762159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 64
               

               
Conread position:
               
78-202
               

               
Cow position:
               
chr25:11895859-11895737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
78-221
               

               
Cow position:
               
chr25:18271886-18272029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
78-233
               

               
Cow position:
               
chr25:20790068-20789914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 70
               

               
Conread position:
               
78-245
               

               
Cow position:
               
chr25:2624269-2624435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
78-245
               

               
Cow position:
               
chr25:6421426-6421258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
78-307
               

               
Cow position:
               
chr25:10580463-10580237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
78-375
               

               
Cow position:
               
chr25:35339960-35340256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
138, 93
               

               
Conread position:
               
78-377
               

               
Cow position:
               
chr25:40388828-40388531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
78-379
               

               
Cow position:
               
chr25:4548097-4547787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
71, 104
               

               
Conread position:
               
78-379
               

               
Cow position:
               
chr25:18721471-18721185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 14
               

               
Conread position:
               
78-380
               

               
Cow position:
               
chr25:36554630-36554935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
137, 198
               

               
Conread position:
               
78-410
               

               
Cow position:
               
chr25:32191294-32191628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
96, 162
               

               
Conread position:
               
78-414
               

               
Cow position:
               
chr25:11662190-11661851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
176, 103
               

               
Conread position:
               
78-461
               

               
Cow position:
               
chr25:41387884-41387513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
227, 100
               

               
Conread position:
               
78-477
               

               
Cow position:
               
chr25:11054555-11054928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
78-483
               

               
Cow position:
               
chr25:23410290-23410700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
124, 93
               

               
Conread position:
               
78-493
               

               
Cow position:
               
chr25:33255997-33256395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
78-500
               

               
Cow position:
               
chr25:18294690-18294264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 180
               

               
Conread position:
               
78-504
               

               
Cow position:
               
chr25:20020343-20019949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
415, 28
               

               
Conread position:
               
81-220
               

               
Cow position:
               
chr25:26791662-26791800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
81-222
               

               
Cow position:
               
chr25:27017364-27017222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
81-242
               

               
Cow position:
               
chr25:7259176-7259339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
81-245
               

               
Cow position:
               
chr25:8659475-8659313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
81-245
               

               
Cow position:
               
chr25:22730278-22730431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
81-337
               

               
Cow position:
               
chr25:10367058-10366806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
194, 135
               

               
Conread position:
               
81-375
               

               
Cow position:
               
chr25:10748872-10748575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
135, 111
               

               
Conread position:
               
81-379
               

               
Cow position:
               
chr25:24227712-24227402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
101, 161
               

               
Conread position:
               
81-380
               

               
Cow position:
               
chr25:18490703-18491005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 70
               

               
Conread position:
               
81-382
               

               
Cow position:
               
chr25:23334640-23334948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
134, 195
               

               
Conread position:
               
81-382
               

               
Cow position:
               
chr25:33990036-33989727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
81-393
               

               
Cow position:
               
chr25:11097336-11097656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
134, 195
               

               
Conread position:
               
81-393
               

               
Cow position:
               
chr25:13967036-13966716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
81-397
               

               
Cow position:
               
chr25:2511080-2510756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
134, 195
               

               
Conread position:
               
81-398
               

               
Cow position:
               
chr25:35608098-35607774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
81-479
               

               
Cow position:
               
chr25:380353-379950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
134, 195
               

               
Conread position:
               
82-204
               

               
Cow position:
               
chr25:7479212-7479334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 74
               

               
Conread position:
               
82-247
               

               
Cow position:
               
chr25:17553634-17553468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
82-310
               

               
Cow position:
               
chr25:17585304-17585086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
82-382
               

               
Cow position:
               
chr25:11269569-11269266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
133, 229
               

               
Conread position:
               
82-405
               

               
Cow position:
               
chr25:35347532-35347863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 56
               

               
Conread position:
               
82-504
               

               
Cow position:
               
chr25:16922165-16921743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 126
               

               
Conread position:
               
84-204
               

               
Cow position:
               
chr25:7032601-7032721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
84-219
               

               
Cow position:
               
chr25:26353131-26353001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
84-231
               

               
Cow position:
               
chr25:16345468-16345615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
84-299
               

               
Cow position:
               
chr25:2453962-2453746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
137, 90
               

               
Conread position:
               
84-367
               

               
Cow position:
               
chr25:35567255-35566964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
136, 202
               

               
Conread position:
               
84-372
               

               
Cow position:
               
chr25:5756322-5756626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
96, 217
               

               
Conread position:
               
84-377
               

               
Cow position:
               
chr25:37469409-37469699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
98, 134
               

               
Conread position:
               
84-382
               

               
Cow position:
               
chr25:26407831-26408133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
132, 93
               

               
Conread position:
               
84-468
               

               
Cow position:
               
chr25:6470585-6470199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 127
               

               
Conread position:
               
84-483
               

               
Cow position:
               
chr25:19924153-19924557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
84-503
               

               
Cow position:
               
chr25:1837874-1838294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 94
               

               
Conread position:
               
84-504
               

               
Cow position:
               
chr25:18564124-18564540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 192
               

               
Conread position:
               
85-219
               

               
Cow position:
               
chr25:26881848-26881982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
85-349
               

               
Cow position:
               
chr25:3992422-3992693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
131, 251
               

               
Conread position:
               
85-349
               

               
Cow position:
               
chr25:11830262-11830001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
86-334
               

               
Cow position:
               
chr25:37687524-37687283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
133, 89
               

               
Conread position:
               
86-385
               

               
Cow position:
               
chr25:12750530-12750219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
136, 304
               

               
Conread position:
               
86-504
               

               
Cow position:
               
chr25:6683427-6683008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
129, 42
               

               
Conread position:
               
87-297
               

               
Cow position:
               
chr25:13132401-13132608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
121, 53
               

               
Conread position:
               
87-323
               

               
Cow position:
               
chr25:14618109-14617869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 155
               

               
Conread position:
               
87-344
               

               
Cow position:
               
chr25:12064003-12063739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
125, 169
               

               
Conread position:
               
87-382
               

               
Cow position:
               
chr25:19531019-19531322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
87-458
               

               
Cow position:
               
chr25:21024568-21024209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
134, 63
               

               
Conread position:
               
87-504
               

               
Cow position:
               
chr25:33959625-33959198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 60
               

               
Conread position:
               
88-308
               

               
Cow position:
               
chr25:11051018-11051229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
88-504
               

               
Cow position:
               
chr25:6967135-6966718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 10
               

               
Conread position:
               
89-308
               

               
Cow position:
               
chr25:9625446-9625663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
124, 40
               

               
Conread position:
               
89-377
               

               
Cow position:
               
chr25:30816462-30816761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
128, 32
               

               
Conread position:
               
89-458
               

               
Cow position:
               
chr25:31733096-31732729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
90-403
               

               
Cow position:
               
chr25:40957349-40957034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 165
               

               
Conread position:
               
92-194
               

               
Cow position:
               
chr25:21266050-21266151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
92-379
               

               
Cow position:
               
chr25:27621721-27622018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 153
               

               
Conread position:
               
92-410
               

               
Cow position:
               
chr25:26111921-26112228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 107
               

               
Conread position:
               
92-475
               

               
Cow position:
               
chr25:14570005-14570397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
100, 168
               

               
Conread position:
               
92-497
               

               
Cow position:
               
chr25:40321654-40321241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
93-353
               

               
Cow position:
               
chr25:10657397-10657117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
103, 194
               

               
Conread position:
               
93-382
               

               
Cow position:
               
chr25:18236734-18236436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
14, 184
               

               
Conread position:
               
93-410
               

               
Cow position:
               
chr25:12239496-12239187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
212, 39
               

               
Conread position:
               
94-397
               

               
Cow position:
               
chr25:17037097-17037408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
121, 182
               

               
Conread position:
               
94-410
               

               
Cow position:
               
chr25:7800777-7801099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 246
               

               
Conread position:
               
94-480
               

               
Cow position:
               
chr25:18155237-18155628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
137, 182
               

               
Conread position:
               
94-504
               

               
Cow position:
               
chr25:5847154-5846755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
160, 78
               

               
Conread position:
               
95-220
               

               
Cow position:
               
chr25:18681240-18681365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
95-232
               

               
Cow position:
               
chr25:26602947-26602813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
95-354
               

               
Cow position:
               
chr25:14103939-14104190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
95-379
               

               
Cow position:
               
chr25:15694626-15694911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
121, 31
               

               
Conread position:
               
95-475
               

               
Cow position:
               
chr25:38910178-38910564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
120, 181
               

               
Conread position:
               
96-257
               

               
Cow position:
               
chr25:13122585-13122746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
96-300
               

               
Cow position:
               
chr25:13412072-13412277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
120, 169
               

               
Conread position:
               
96-312
               

               
Cow position:
               
chr25:14960057-14959845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
121, 96
               

               
Conread position:
               
96-331
               

               
Cow position:
               
chr25:13525347-13525115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
209, 123
               

               
Conread position:
               
96-364
               

               
Cow position:
               
chr25:35617781-35618049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
220, 23
               

               
Conread position:
               
96-367
               

               
Cow position:
               
chr25:36119845-36120118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
96-378
               

               
Cow position:
               
chr25:26238512-26238799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 180
               

               
Conread position:
               
96-382
               

               
Cow position:
               
chr25:6948416-6948121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
96-434
               

               
Cow position:
               
chr25:22549959-22549662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
97-322
               

               
Cow position:
               
chr25:33025436-33025215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
217, 87
               

               
Conread position:
               
97-356
               

               
Cow position:
               
chr25:9842649-9842910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
97-478
               

               
Cow position:
               
chr25:10698798-10699185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 175
               

               
Conread position:
               
97-504
               

               
Cow position:
               
chr25:16064542-16064946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
98-458
               

               
Cow position:
               
chr25:10137751-10138099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
101-266
               

               
Cow position:
               
chr25:10013737-10013571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
94, 112
               

               
Conread position:
               
101-479
               

               
Cow position:
               
chr25:23351044-23351425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
111, 299
               

               
Conread position:
               
105-210
               

               
Cow position:
               
chr25:16044932-16044827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
105-219
               

               
Cow position:
               
chr25:12807852-12807738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
105-222
               

               
Cow position:
               
chr25:35655214-35655332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
105-242
               

               
Cow position:
               
chr25:20434207-20434342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
113, 67
               

               
Conread position:
               
105-375
               

               
Cow position:
               
chr25:26523629-26523890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
11, 146
               

               
Conread position:
               
105-413
               

               
Cow position:
               
chr25:38981759-38982066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
72, 113
               

               
Conread position:
               
107-345
               

               
Cow position:
               
chr25:31586694-31586937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
111, 167
               

               
Conread position:
               
108-245
               

               
Cow position:
               
chr25:8485877-8485742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
109-397
               

               
Cow position:
               
chr25:7445810-7446097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
110-230
               

               
Cow position:
               
chr25:6961520-6961401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 83
               

               
Conread position:
               
111-504
               

               
Cow position:
               
chr25:21245948-21245550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 162
               

               
Conread position:
               
112-397
               

               
Cow position:
               
chr25:17354038-17354326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
70, 85
               

               
Conread position:
               
113-247
               

               
Cow position:
               
chr25:3969056-3969191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
113-409
               

               
Cow position:
               
chr25:2126129-2126425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
103, 131
               

               
Conread position:
               
114-314
               

               
Cow position:
               
chr25:10212158-10212349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
175, 14
               

               
Conread position:
               
114-382
               

               
Cow position:
               
chr25:13062518-13062794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 162
               

               
Conread position:
               
114-477
               

               
Cow position:
               
chr25:20625268-20624905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
176, 95
               

               
Conread position:
               
115-222
               

               
Cow position:
               
chr25:33735284-33735392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
115-382
               

               
Cow position:
               
chr25:23738792-23738517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
100, 161
               

               
Conread position:
               
119-476
               

               
Cow position:
               
chr25:17538747-17538384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
96, 157
               

               
Conread position:
               
119-494
               

               
Cow position:
               
chr25:9957368-9956995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 131
               

               
Conread position:
               
120-217
               

               
Cow position:
               
chr25:38791560-38791463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
120-352
               

               
Cow position:
               
chr25:6803231-6803458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
95, 128
               

               
Conread position:
               
121-382
               

               
Cow position:
               
chr25:10637838-10637569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
94, 155
               

               
Conread position:
               
121-502
               

               
Cow position:
               
chr25:36037122-36036727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
64, 164
               

               
Conread position:
               
123-354
               

               
Cow position:
               
chr25:16242301-16242066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 155
               

               
Conread position:
               
125-397
               

               
Cow position:
               
chr25:17418855-17419135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 151
               

               
Conread position:
               
127-476
               

               
Cow position:
               
chr25:29352251-29351895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
12, 108
               

               
Conread position:
               
127-504
               

               
Cow position:
               
chr25:6886294-6885917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
129-432
               

               
Cow position:
               
chr25:9847462-9847771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
129-461
               

               
Cow position:
               
chr25:6424905-6424577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
144, 44
               

               
Conread position:
               
130-379
               

               
Cow position:
               
chr25:17975690-17975438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
82, 126
               

               
Conread position:
               
131-482
               

               
Cow position:
               
chr25:22910169-22909826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
132-385
               

               
Cow position:
               
chr25:16231445-16231187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
133-504
               

               
Cow position:
               
chr25:12097522-12097894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
6, 50
               

               
Conread position:
               
134-504
               

               
Cow position:
               
chr25:25051703-25051324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 122
               

               
Conread position:
               
134-504
               

               
Cow position:
               
chr25:27821091-27821467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
60, 292
               

               
Conread position:
               
135-379
               

               
Cow position:
               
chr25:15714564-15714808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
135-477
               

               
Cow position:
               
chr25:9023327-9023659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
86, 103
               

               
Conread position:
               
138-468
               

               
Cow position:
               
chr25:13708702-13709027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
81, 126
               

               
Conread position:
               
141-413
               

               
Cow position:
               
chr25:10366063-10365789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
143-458
               

               
Cow position:
               
chr25:12817063-12817380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
119, 211
               

               
Conread position:
               
144-341
               

               
Cow position:
               
chr25:29561655-29561855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 132
               

               
Conread position:
               
144-354
               

               
Cow position:
               
chr25:18968963-18969181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
144-411
               

               
Cow position:
               
chr25:8347200-8347469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
72, 130
               

               
Conread position:
               
145-504
               

               
Cow position:
               
chr25:23053248-23053611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
76, 256
               

               
Conread position:
               
154-392
               

               
Cow position:
               
chr25:25948694-25948456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
67, 110
               

               
Conread position:
               
155-504
               

               
Cow position:
               
chr25:16319424-16319086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
157-386
               

               
Cow position:
               
chr25:448641-448408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
157-503
               

               
Cow position:
               
chr25:6474396-6474034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
158-504
               

               
Cow position:
               
chr25:19129571-19129909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
148, 37
               

               
Conread position:
               
159-502
               

               
Cow position:
               
chr25:14117815-14118144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
163-498
               

               
Cow position:
               
chr25:21895177-21894836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
169-504
               

               
Cow position:
               
chr25:20348574-20348923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
171-501
               

               
Cow position:
               
chr25:5834535-5834198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
45, 185
               

               
Conread position:
               
174-485
               

               
Cow position:
               
chr25:22297296-22296984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
48, 161
               

               
Conread position:
               
175-504
               

               
Cow position:
               
chr25:18988101-18988444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
177-408
               

               
Cow position:
               
chr25:18206576-18206344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
5, 37
               

               
Conread position:
               
177-504
               

               
Cow position:
               
chr25:12261170-12260835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
178-504
               

               
Cow position:
               
chr25:36081600-36081929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
180-504
               

               
Cow position:
               
chr25:33691283-33691612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
182-504
               

               
Cow position:
               
chr25:14512845-14513169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
119, 72
               

               
Conread position:
               
183-387
               

               
Cow position:
               
chr25:21266736-21266947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
183-401
               

               
Cow position:
               
chr25:17712264-17712488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
183-475
               

               
Cow position:
               
chr25:36535702-36535411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
183-493
               

               
Cow position:
               
chr25:22203960-22203647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
183-504
               

               
Cow position:
               
chr25:14196585-14196917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
183-504
               

               
Cow position:
               
chr25:28188216-28187891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
184-504
               

               
Cow position:
               
chr25:12081584-12081268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
185-504
               

               
Cow position:
               
chr25:35612571-35612259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
11, 53
               

               
Conread position:
               
186-461
               

               
Cow position:
               
chr25:35344771-35345039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
186-468
               

               
Cow position:
               
chr25:35625438-35625169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
187-440
               

               
Cow position:
               
chr25:24452434-24452188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
188-412
               

               
Cow position:
               
chr25:26058320-26058550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
189-504
               

               
Cow position:
               
chr25:17566323-17566641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
193-368
               

               
Cow position:
               
chr25:40407729-40407552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
108, 32
               

               
Conread position:
               
193-413
               

               
Cow position:
               
chr25:9961438-9961207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
193-474
               

               
Cow position:
               
chr25:35332913-35333179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
193-504
               

               
Cow position:
               
chr25:18487414-18487722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
193-504
               

               
Cow position:
               
chr25:26700780-26701081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
193-504
               

               
Cow position:
               
chr25:31230483-31230188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
194-460
               

               
Cow position:
               
chr25:8918537-8918269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 149
               

               
Conread position:
               
194-463
               

               
Cow position:
               
chr25:13642575-13642300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 229
               

               
Conread position:
               
194-465
               

               
Cow position:
               
chr25:7306039-7306318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
195-410
               

               
Cow position:
               
chr25:16400507-16400302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 6
               

               
Conread position:
               
195-441
               

               
Cow position:
               
chr25:16001779-16001537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
195-504
               

               
Cow position:
               
chr25:7581685-7581377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
60, 144
               

               
Conread position:
               
199-410
               

               
Cow position:
               
chr25:36026753-36026969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
200-462
               

               
Cow position:
               
chr25:4002543-4002811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 73
               

               
Conread position:
               
200-504
               

               
Cow position:
               
chr25:18265911-18266218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
106, 71
               

               
Conread position:
               
201-413
               

               
Cow position:
               
chr25:24669682-24669474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
213-502
               

               
Cow position:
               
chr25:12840957-12840666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
214-504
               

               
Cow position:
               
chr25:21289102-21289400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 202
               

               
Conread position:
               
215-457
               

               
Cow position:
               
chr25:7329307-7329553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
215-489
               

               
Cow position:
               
chr25:8560632-8560907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
215-503
               

               
Cow position:
               
chr25:1762870-1763140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
215-504
               

               
Cow position:
               
chr25:15377096-15377380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
216-504
               

               
Cow position:
               
chr25:61421-61704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
218-410
               

               
Cow position:
               
chr25:6256172-6255976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
225-504
               

               
Cow position:
               
chr25:6961377-6961099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
250-475
               

               
Cow position:
               
chr25:12755704-12755465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
254-504
               

               
Cow position:
               
chr25:13294698-13294936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
30, 129
               

               
Conread position:
               
260-504
               

               
Cow position:
               
chr25:34768922-34768678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr25:8157692-8157454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 48
               

               
Conread position:
               
275-413
               

               
Cow position:
               
chr25:20789673-20789538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
278-475
               

               
Cow position:
               
chr25:26270109-26269915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
278-476
               

               
Cow position:
               
chr25:36017364-36017565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
278-478
               

               
Cow position:
               
chr25:3982869-3983065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
278-498
               

               
Cow position:
               
chr25:26133863-26134090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 147
               

               
Conread position:
               
278-504
               

               
Cow position:
               
chr25:16714449-16714215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
278-504
               

               
Cow position:
               
chr25:25861535-25861296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
284-504
               

               
Cow position:
               
chr25:21893168-21893392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 32
               

               
Conread position:
               
285-413
               

               
Cow position:
               
chr25:23323038-23323168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
285-493
               

               
Cow position:
               
chr25:13672224-13672437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
21, 135
               

               
Conread position:
               
285-503
               

               
Cow position:
               
chr25:18905717-18905938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
285-504
               

               
Cow position:
               
chr25:15440948-15440723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
20, 137
               

               
Conread position:
               
285-504
               

               
Cow position:
               
chr25:17342285-17342512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 142
               

               
Conread position:
               
287-458
               

               
Cow position:
               
chr25:31732494-31732331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
287-504
               

               
Cow position:
               
chr25:448333-448111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
288-477
               

               
Cow position:
               
chr25:18894884-18894693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
288-504
               

               
Cow position:
               
chr25:20133477-20133260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
293-502
               

               
Cow position:
               
chr25:13443564-13443358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
293-503
               

               
Cow position:
               
chr25:9002515-9002725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
12, 110
               

               
Conread position:
               
293-504
               

               
Cow position:
               
chr25:26259651-26259433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
301-504
               

               
Cow position:
               
chr25:6687803-6687999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
194, 5
               

               
Conread position:
               
306-490
               

               
Cow position:
               
chr25:12997449-12997632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 102
               

               
Conread position:
               
306-493
               

               
Cow position:
               
chr25:24651594-24651411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
167, 106
               

               
Conread position:
               
307-504
               

               
Cow position:
               
chr25:22730691-22730884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
314-504
               

               
Cow position:
               
chr25:33686814-33686631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
139, 18
               

               
Conread position:
               
315-504
               

               
Cow position:
               
chr25:20216699-20216888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
137, 105
               

               
Conread position:
               
315-504
               

               
Cow position:
               
chr25:22751143-22750953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
319-504
               

               
Cow position:
               
chr25:19317128-19317319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
321-504
               

               
Cow position:
               
chr25:18202054-18201875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 99
               

               
Conread position:
               
332-504
               

               
Cow position:
               
chr25:17119627-17119796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
336-504
               

               
Cow position:
               
chr25:30816772-30816943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
68, 87
               

               
Conread position:
               
338-504
               

               
Cow position:
               
chr25:1824207-1824043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
112, 42
               

               
Conread position:
               
339-503
               

               
Cow position:
               
chr25:12252923-12252756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               
Show alignments to all cow chromosomes.