Cow genome map
| Conread name: | Ss1.1-rret24_f24.5 | 
| Conread position: | 48-195 | 
| Cow position: | chr6:67218955-67219106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 48-247 | 
| Cow position: | chr6:58370215-58370414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 50, 15 | 
| Conread position: | 49-479 | 
| Cow position: | chr6:28276303-28276734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 167, 9 | 
| Conread position: | 49-504 | 
| Cow position: | chr6:17090236-17090695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 11 | 
| Conread position: | 53-504 | 
| Cow position: | chr6:62925350-62924900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 29 | 
| Conread position: | 55-504 | 
| Cow position: | chr6:4864890-4864451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 13 | 
| Conread position: | 56-379 | 
| Cow position: | chr6:24031023-24031351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 164, 26 | 
| Conread position: | 57-313 | 
| Cow position: | chr6:18955384-18955129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 127, 25 | 
| Conread position: | 57-379 | 
| Cow position: | chr6:12623120-12623441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 25 | 
| Conread position: | 58-204 | 
| Cow position: | chr6:15923575-15923426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 124, 24 | 
| Conread position: | 62-222 | 
| Cow position: | chr6:13345260-13345101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 153, 10 | 
| Conread position: | 64-373 | 
| Cow position: | chr6:17248385-17248700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 57, 15 | 
| Conread position: | 65-253 | 
| Cow position: | chr6:55345222-55345040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 14, 118 | 
| Conread position: | 65-309 | 
| Cow position: | chr6:33865433-33865200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 210, 17 | 
| Conread position: | 65-503 | 
| Cow position: | chr6:18080859-18080421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 16 | 
| Conread position: | 66-504 | 
| Cow position: | chr6:611224-611645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 150, 6 | 
| Conread position: | 67-382 | 
| Cow position: | chr6:32054878-32054559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 148, 104 | 
| Conread position: | 68-183 | 
| Cow position: | chr6:28415038-28414929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 68-204 | 
| Cow position: | chr6:27477662-27477796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 68-237 | 
| Cow position: | chr6:28156457-28156290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 151, 14 | 
| Conread position: | 68-245 | 
| Cow position: | chr6:119636-119813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 65, 14 | 
| Conread position: | 68-320 | 
| Cow position: | chr6:64895747-64895991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 147, 14 | 
| Conread position: | 68-324 | 
| Cow position: | chr6:1866341-1866589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 14, 107 | 
| Conread position: | 68-344 | 
| Cow position: | chr6:17871058-17871339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 147, 14 | 
| Conread position: | 68-345 | 
| Cow position: | chr6:16518196-16517920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 223, 15 | 
| Conread position: | 68-355 | 
| Cow position: | chr6:181732-181455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 228, 13 | 
| Conread position: | 68-363 | 
| Cow position: | chr6:12844970-12845267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 14 | 
| Conread position: | 68-367 | 
| Cow position: | chr6:40814170-40814477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 148, 13 | 
| Conread position: | 68-379 | 
| Cow position: | chr6:9322800-9323133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 93, 14 | 
| Conread position: | 68-403 | 
| Cow position: | chr6:18447853-18447514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 197 | 
| Conread position: | 68-460 | 
| Cow position: | chr6:58594451-58594054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 123, 15 | 
| Conread position: | 68-475 | 
| Cow position: | chr6:28148502-28148899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 27, 18 | 
| Conread position: | 68-479 | 
| Cow position: | chr6:62851619-62851206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 222, 14 | 
| Conread position: | 68-493 | 
| Cow position: | chr6:58589693-58590106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 148, 106 | 
| Conread position: | 68-504 | 
| Cow position: | chr6:13366958-13367381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 44, 14 | 
| Conread position: | 68-504 | 
| Cow position: | chr6:26728869-26728436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 230, 195 | 
| Conread position: | 69-178 | 
| Cow position: | chr6:240532-240641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 69-180 | 
| Cow position: | chr6:44623116-44623005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 69-196 | 
| Cow position: | chr6:53553151-53553278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 69-199 | 
| Cow position: | chr6:6459917-6460047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 69-303 | 
| Cow position: | chr6:33509239-33509473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 113, 56 | 
| Conread position: | 69-413 | 
| Cow position: | chr6:55143466-55143094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 127, 0 | 
| Conread position: | 70-311 | 
| Cow position: | chr6:47773553-47773314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 103, 18 | 
| Conread position: | 70-460 | 
| Cow position: | chr6:11160358-11159954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 142, 58 | 
| Conread position: | 70-504 | 
| Cow position: | chr6:9751386-9750961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 112, 199 | 
| Conread position: | 71-214 | 
| Cow position: | chr6:65866618-65866476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 71-504 | 
| Cow position: | chr6:8636935-8637377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 203 | 
| Conread position: | 72-190 | 
| Cow position: | chr6:47640835-47640718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 72-204 | 
| Cow position: | chr6:1834802-1834934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 72-245 | 
| Cow position: | chr6:18904910-18904738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 165, 0 | 
| Conread position: | 72-393 | 
| Cow position: | chr6:13307596-13307266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 143, 204 | 
| Conread position: | 72-504 | 
| Cow position: | chr6:28482675-28483112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 202 | 
| Conread position: | 74-178 | 
| Cow position: | chr6:18142787-18142890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 105 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 74-311 | 
| Cow position: | chr6:22804700-22804469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 138, 21 | 
| Conread position: | 74-393 | 
| Cow position: | chr6:13494278-13493951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 141, 202 | 
| Conread position: | 74-403 | 
| Cow position: | chr6:21587755-21587422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 16 | 
| Conread position: | 74-412 | 
| Cow position: | chr6:10332443-10332086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 74-475 | 
| Cow position: | chr6:37217431-37217838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 141, 202 | 
| Conread position: | 75-217 | 
| Cow position: | chr6:65818417-65818275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 75-222 | 
| Cow position: | chr6:180698-180552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 75-222 | 
| Cow position: | chr6:34405169-34405022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 75-222 | 
| Cow position: | chr6:68830108-68830255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 75-228 | 
| Cow position: | chr6:28509526-28509678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 142, 9 | 
| Conread position: | 75-309 | 
| Cow position: | chr6:6569786-6570013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 214, 7 | 
| Conread position: | 75-327 | 
| Cow position: | chr6:8599453-8599705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 38, 7 | 
| Conread position: | 75-355 | 
| Cow position: | chr6:23117735-23117447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 141, 0 | 
| Conread position: | 75-356 | 
| Cow position: | chr6:8206001-8206289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 146, 163 | 
| Conread position: | 75-371 | 
| Cow position: | chr6:14706747-14706463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 145, 7 | 
| Conread position: | 75-375 | 
| Cow position: | chr6:49411015-49410725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 112, 65 | 
| Conread position: | 75-382 | 
| Cow position: | chr6:45938093-45938407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 140, 162 | 
| Conread position: | 75-382 | 
| Cow position: | chr6:49963349-49963038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 140, 189 | 
| Conread position: | 75-385 | 
| Cow position: | chr6:44578730-44578418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 141, 134 | 
| Conread position: | 75-387 | 
| Cow position: | chr6:9737449-9737135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 53, 7 | 
| Conread position: | 75-397 | 
| Cow position: | chr6:41193162-41193491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 34, 7 | 
| Conread position: | 75-397 | 
| Cow position: | chr6:48872542-48872219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 146, 81 | 
| Conread position: | 75-405 | 
| Cow position: | chr6:2012687-2013016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 141, 20 | 
| Conread position: | 75-460 | 
| Cow position: | chr6:9733167-9732790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 67 | 
| Conread position: | 75-502 | 
| Cow position: | chr6:222774-222360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 141, 7 | 
| Conread position: | 75-503 | 
| Cow position: | chr6:59508012-59508451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 44, 7 | 
| Conread position: | 75-503 | 
| Cow position: | chr6:61631948-61631514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 147, 7 | 
| Conread position: | 75-504 | 
| Cow position: | chr6:29210166-29210591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 141, 129 | 
| Conread position: | 75-504 | 
| Cow position: | chr6:31535891-31535473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 114, 7 | 
| Conread position: | 75-504 | 
| Cow position: | chr6:55610571-55610140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 147, 131 | 
| Conread position: | 76-176 | 
| Cow position: | chr6:28100851-28100751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 101 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-176 | 
| Cow position: | chr6:56556797-56556697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 101 | 
| Alignm identity: | 83 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-183 | 
| Cow position: | chr6:29239373-29239481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 76-183 | 
| Cow position: | chr6:56885626-56885733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 108 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-184 | 
| Cow position: | chr6:44131038-44130928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 76-185 | 
| Cow position: | chr6:32665245-32665354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-185 | 
| Cow position: | chr6:53918063-53917954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-188 | 
| Cow position: | chr6:32300894-32300782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-188 | 
| Cow position: | chr6:55282686-55282573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 114 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 108, 0 | 
| Conread position: | 76-194 | 
| Cow position: | chr6:29484777-29484895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-194 | 
| Cow position: | chr6:42617289-42617407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-197 | 
| Cow position: | chr6:28136553-28136674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-200 | 
| Cow position: | chr6:7104422-7104297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 76-202 | 
| Cow position: | chr6:1637142-1637015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 123, 0 | 
| Conread position: | 76-202 | 
| Cow position: | chr6:20515390-20515516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-202 | 
| Cow position: | chr6:52697431-52697557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-203 | 
| Cow position: | chr6:479361-479488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-203 | 
| Cow position: | chr6:39330717-39330590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-203 | 
| Cow position: | chr6:47171858-47171985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-204 | 
| Cow position: | chr6:3484591-3484463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-204 | 
| Cow position: | chr6:34494483-34494611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-207 | 
| Cow position: | chr6:28636363-28636232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-207 | 
| Cow position: | chr6:34031051-34031179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 76-207 | 
| Cow position: | chr6:35416151-35416020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-207 | 
| Cow position: | chr6:44598236-44598105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-211 | 
| Cow position: | chr6:42131156-42131016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 104, 0 | 
| Conread position: | 76-216 | 
| Cow position: | chr6:10706240-10706102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 76-217 | 
| Cow position: | chr6:46283297-46283150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 106, 0 | 
| Conread position: | 76-218 | 
| Cow position: | chr6:3445002-3444863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 76-219 | 
| Cow position: | chr6:1406338-1406195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-219 | 
| Cow position: | chr6:44017008-44016864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 76-219 | 
| Cow position: | chr6:54979324-54979467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-220 | 
| Cow position: | chr6:4948607-4948751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-220 | 
| Cow position: | chr6:15310198-15310054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-220 | 
| Cow position: | chr6:19170950-19171094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-220 | 
| Cow position: | chr6:22627913-22627769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-220 | 
| Cow position: | chr6:40358062-40357918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-220 | 
| Cow position: | chr6:46584949-46585093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-220 | 
| Cow position: | chr6:51468130-51468269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:8283962-8283815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:11185239-11185386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:13489209-13489356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:13597354-13597207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:14133622-14133770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 119, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:14631254-14631403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:14929259-14929405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 139, 110 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:17352188-17352041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:17364695-17364548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:19707244-19707391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:20215581-20215434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:21857551-21857697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 139, 95 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:23879244-23879097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:25374293-25374146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:26667209-26667062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:26771307-26771159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:26916048-26916195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:27152490-27152637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:27173656-27173803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:27401417-27401270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:28161221-28161368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 138, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:28184506-28184359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:28700750-28700603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:30708382-30708235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:33884268-33884121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:39797914-39797767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:41158506-41158359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:43039727-43039874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:45747192-45747045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:49444933-49445078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 136, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:50755688-50755835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:58390209-58390062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:59076897-59076749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:61051308-61051161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:63040520-63040373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:63714474-63714328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 139, 98 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:64096986-64096839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-222 | 
| Cow position: | chr6:68663246-68663100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-223 | 
| Cow position: | chr6:31752717-31752864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 139, 122 | 
| Conread position: | 76-227 | 
| Cow position: | chr6:56651853-56651701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 113, 132 | 
| Conread position: | 76-228 | 
| Cow position: | chr6:3719649-3719801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-228 | 
| Cow position: | chr6:17050185-17050337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-228 | 
| Cow position: | chr6:24243101-24243246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 76-228 | 
| Cow position: | chr6:31739210-31739368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 76-228 | 
| Cow position: | chr6:37487637-37487486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 76-228 | 
| Cow position: | chr6:46224870-46224718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-228 | 
| Cow position: | chr6:49706933-49706781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-228 | 
| Cow position: | chr6:55265960-55265812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 76-239 | 
| Cow position: | chr6:19809344-19809505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 146, 102 | 
| Conread position: | 76-239 | 
| Cow position: | chr6:35260513-35260677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 145, 0 | 
| Conread position: | 76-239 | 
| Cow position: | chr6:52209333-52209496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 145, 16 | 
| Conread position: | 76-242 | 
| Cow position: | chr6:22921052-22921219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 145, 0 | 
| Conread position: | 76-245 | 
| Cow position: | chr6:62015311-62015480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 136, 21 | 
| Conread position: | 76-247 | 
| Cow position: | chr6:34608870-34608698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 23, 170 | 
| Conread position: | 76-260 | 
| Cow position: | chr6:59296449-59296630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 135, 83 | 
| Conread position: | 76-263 | 
| Cow position: | chr6:55763055-55763241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 178, 144 | 
| Conread position: | 76-264 | 
| Cow position: | chr6:33949335-33949142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 102, 16 | 
| Conread position: | 76-265 | 
| Cow position: | chr6:1228957-1228768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 76-274 | 
| Cow position: | chr6:39080732-39080931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-287 | 
| Cow position: | chr6:27093772-27093571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 76-287 | 
| Cow position: | chr6:58761758-58761961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 145, 0 | 
| Conread position: | 76-301 | 
| Cow position: | chr6:41876386-41876163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 76-303 | 
| Cow position: | chr6:39137295-39137530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 137, 37 | 
| Conread position: | 76-303 | 
| Cow position: | chr6:68252449-68252674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 145, 180 | 
| Conread position: | 76-304 | 
| Cow position: | chr6:2324529-2324304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 109, 18 | 
| Conread position: | 76-307 | 
| Cow position: | chr6:65863139-65863360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 145, 0 | 
| Conread position: | 76-308 | 
| Cow position: | chr6:366881-367113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 140, 200 | 
| Conread position: | 76-309 | 
| Cow position: | chr6:10266320-10266090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 208, 144 | 
| Conread position: | 76-310 | 
| Cow position: | chr6:14891167-14890935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-310 | 
| Cow position: | chr6:51150711-51150941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 145, 0 | 
| Conread position: | 76-311 | 
| Cow position: | chr6:32287285-32287507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 132, 162 | 
| Conread position: | 76-315 | 
| Cow position: | chr6:11032528-11032300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 145, 0 | 
| Conread position: | 76-316 | 
| Cow position: | chr6:68272456-68272222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 140, 45 | 
| Conread position: | 76-319 | 
| Cow position: | chr6:2074313-2074543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 145, 0 | 
| Conread position: | 76-319 | 
| Cow position: | chr6:42416508-42416739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 120, 21 | 
| Conread position: | 76-328 | 
| Cow position: | chr6:37331629-37331882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 45, 94 | 
| Conread position: | 76-330 | 
| Cow position: | chr6:11789067-11789324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 141, 180 | 
| Conread position: | 76-331 | 
| Cow position: | chr6:10682408-10682670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 62, 204 | 
| Conread position: | 76-332 | 
| Cow position: | chr6:6471105-6470846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 105, 20 | 
| Conread position: | 76-340 | 
| Cow position: | chr6:55205772-55205516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 233, 76 | 
| Conread position: | 76-343 | 
| Cow position: | chr6:2640456-2640179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 101, 75 | 
| Conread position: | 76-343 | 
| Cow position: | chr6:53448714-53448988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 145, 6 | 
| Conread position: | 76-344 | 
| Cow position: | chr6:7253773-7253486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 106, 208 | 
| Conread position: | 76-348 | 
| Cow position: | chr6:19843088-19843369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-348 | 
| Cow position: | chr6:45666125-45665845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 140, 203 | 
| Conread position: | 76-349 | 
| Cow position: | chr6:41835115-41835395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-349 | 
| Cow position: | chr6:65041167-65040888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-352 | 
| Cow position: | chr6:22507411-22507685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 220, 146 | 
| Conread position: | 76-353 | 
| Cow position: | chr6:875660-875374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 11, 26 | 
| Conread position: | 76-354 | 
| Cow position: | chr6:65874289-65874006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 145, 25 | 
| Conread position: | 76-355 | 
| Cow position: | chr6:2185687-2185401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 148, 162 | 
| Conread position: | 76-355 | 
| Cow position: | chr6:64720962-64721240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 206, 8 | 
| Conread position: | 76-356 | 
| Cow position: | chr6:2110449-2110164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 145, 78 | 
| Conread position: | 76-356 | 
| Cow position: | chr6:15275426-15275138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 145, 200 | 
| Conread position: | 76-356 | 
| Cow position: | chr6:20552438-20552151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 145, 166 | 
| Conread position: | 76-356 | 
| Cow position: | chr6:25218594-25218881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 145, 0 | 
| Conread position: | 76-356 | 
| Cow position: | chr6:50423735-50423452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 149, 187 | 
| Conread position: | 76-356 | 
| Cow position: | chr6:65844871-65845152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 232, 199 | 
| Conread position: | 76-359 | 
| Cow position: | chr6:39998666-39998375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 145, 158 | 
| Conread position: | 76-363 | 
| Cow position: | chr6:8209920-8209636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 96 | 
| Conread position: | 76-363 | 
| Cow position: | chr6:40549886-40549591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 145, 192 | 
| Conread position: | 76-364 | 
| Cow position: | chr6:26413048-26413336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 233, 21 | 
| Conread position: | 76-364 | 
| Cow position: | chr6:50527324-50527608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 76-367 | 
| Cow position: | chr6:3271666-3271383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 44, 156 | 
| Conread position: | 76-367 | 
| Cow position: | chr6:9375706-9375407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 139, 70 | 
| Conread position: | 76-367 | 
| Cow position: | chr6:11288653-11288353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 95, 159 | 
| Conread position: | 76-367 | 
| Cow position: | chr6:17111351-17111054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 134, 86 | 
| Conread position: | 76-367 | 
| Cow position: | chr6:17122204-17122498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 134, 86 | 
| Conread position: | 76-367 | 
| Cow position: | chr6:25207251-25207550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-367 | 
| Cow position: | chr6:38872713-38872418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 145, 21 | 
| Conread position: | 76-367 | 
| Cow position: | chr6:48421995-48421698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 77, 159 | 
| Conread position: | 76-367 | 
| Cow position: | chr6:58031788-58032084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 154, 95 | 
| Conread position: | 76-367 | 
| Cow position: | chr6:62592895-62592595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 145, 200 | 
| Conread position: | 76-369 | 
| Cow position: | chr6:46681474-46681770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 145, 105 | 
| Conread position: | 76-379 | 
| Cow position: | chr6:1278845-1278539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 140, 41 | 
| Conread position: | 76-379 | 
| Cow position: | chr6:10106335-10106020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 97, 202 | 
| Conread position: | 76-379 | 
| Cow position: | chr6:15305254-15305552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 196, 96 | 
| Conread position: | 76-379 | 
| Cow position: | chr6:20451772-20452079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 179, 135 | 
| Conread position: | 76-379 | 
| Cow position: | chr6:24125618-24125311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 145, 128 | 
| Conread position: | 76-379 | 
| Cow position: | chr6:39358670-39358373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 199, 29 | 
| Conread position: | 76-379 | 
| Cow position: | chr6:46666772-46667083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 95, 33 | 
| Conread position: | 76-379 | 
| Cow position: | chr6:57474045-57474349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 145, 196 | 
| Conread position: | 76-380 | 
| Cow position: | chr6:7449310-7449622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-380 | 
| Cow position: | chr6:11034442-11034130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-380 | 
| Cow position: | chr6:19737342-19737654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-380 | 
| Cow position: | chr6:36258769-36259081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 139, 160 | 
| Conread position: | 76-380 | 
| Cow position: | chr6:46161859-46161547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 146, 286 | 
| Conread position: | 76-381 | 
| Cow position: | chr6:6568419-6568114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 139, 72 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:76627-76313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:327548-327227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 139, 119 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:758038-758352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:2196499-2196817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 119, 204 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:2389862-2389549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:2867645-2867331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 136, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:3153027-3153342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 140, 201 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:3157561-3157247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:5367020-5366706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:5751647-5751959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 136, 158 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:9235327-9235641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 169 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:9321095-9321413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 208, 143 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:9741980-9742294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:11020473-11020787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:11453052-11452738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:12998231-12998545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:13605564-13605250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:13619806-13619492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:13945678-13945992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:14225528-14225214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:15882009-15881696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:16049481-16049174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 139, 90 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:17631955-17631640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:18418787-18418473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:18803244-18802931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 139, 180 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:18911919-18911605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:19515665-19515979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:19819259-19819573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:20268342-20268641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 232, 146 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:22043195-22042884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 139, 75 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:23426858-23427172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:23567793-23567479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:24262932-24263246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:24757683-24757375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 139, 188 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:26925725-26925412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 216, 199 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:28294010-28293696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:28486846-28486531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 136, 149 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:31192662-31192347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 140, 201 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:33489419-33489106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 139, 45 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:33897561-33897257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 139, 120 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:40250989-40250676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 186, 0 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:40449852-40449538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:40710190-40710504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:40912735-40912430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 239, 135 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:41033728-41034041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:41470732-41471046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:43049826-43050138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 187, 157 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:43389730-43390044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:43921451-43921758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:43955367-43955681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:44146136-44145819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 15, 131 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:45591960-45592278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:46371779-46371467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 40 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:47674788-47675101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 214, 199 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:48290612-48290921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 139, 29 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:49579912-49580226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:49684901-49684587 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 161 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:53271469-53271783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:54202229-54201916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:55388552-55388865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 139, 95 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:55582332-55582018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:57521990-57522304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:58940557-58940245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 138, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:60066138-60066452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:67554045-67554360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 139, 201 | 
| Conread position: | 76-385 | 
| Cow position: | chr6:58605947-58606260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 154, 189 | 
| Conread position: | 76-386 | 
| Cow position: | chr6:22877489-22877180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 144, 113 | 
| Conread position: | 76-387 | 
| Cow position: | chr6:7466836-7466518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-387 | 
| Cow position: | chr6:62331252-62330936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 216, 145 | 
| Conread position: | 76-390 | 
| Cow position: | chr6:10045020-10045342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 20, 280 | 
| Conread position: | 76-390 | 
| Cow position: | chr6:53345461-53345779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 141, 180 | 
| Conread position: | 76-390 | 
| Cow position: | chr6:62038210-62038528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 139, 93 | 
| Conread position: | 76-390 | 
| Cow position: | chr6:67818535-67818213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-391 | 
| Cow position: | chr6:65862351-65862674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 287 | 
| Conread position: | 76-392 | 
| Cow position: | chr6:2090073-2090397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 138, 200 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:1797440-1797765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:2668643-2668324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 140, 164 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:9226333-9226656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:11869122-11868797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:16645686-16646011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:19719385-19719714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 138, 150 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:24237538-24237213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:28065802-28066132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 139, 149 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:31081714-31082027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 222, 143 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:31520253-31520578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 139, 196 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:31548764-31548441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 140, 200 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:39088437-39088758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:42481696-42482018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 138, 124 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:53542654-53542330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 143, 200 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:53740106-53740432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 199, 0 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:54886800-54886475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:56080102-56079779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 140, 0 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:57309036-57309361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 140, 280 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:67403553-67403228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-393 | 
| Cow position: | chr6:68340134-68339810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-395 | 
| Cow position: | chr6:10107315-10107641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 136, 37 | 
| Conread position: | 76-395 | 
| Cow position: | chr6:36901825-36902152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-396 | 
| Cow position: | chr6:65910140-65910462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 139, 189 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:47740-47417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 187, 109 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:444113-443784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:706809-707138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 145, 0 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:1817200-1816875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 187, 272 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:1910983-1911312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:1957106-1956777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:6181911-6181582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 145, 172 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:6557686-6558015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:6578109-6577780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:10013612-10013941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:10865755-10866084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:11402135-11402463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 139, 67 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:11721113-11720784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 198, 147 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:12972211-12972540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:13531479-13531808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:14388911-14388582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:17935361-17935032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:18649099-18648770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:20174197-20174526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:20580964-20580635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:21164118-21164447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:25363366-25363695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:27526190-27525862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 145, 52 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:27541376-27541705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:28112023-28111698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 229, 148 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:28172885-28173213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 229, 199 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:33863421-33863750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:37736735-37737064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:38053554-38053883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:38917224-38916895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 139, 160 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:41232277-41232603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 193, 30 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:41823022-41822693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:43604436-43604765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:43789555-43789231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 145, 41 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:45694676-45695005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:45751748-45752077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:45765306-45764977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:46607694-46607365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:52482160-52482489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:53052394-53052723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:55361771-55362098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:55720983-55721312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:56441265-56440936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 145, 0 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:57796232-57795903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:58747876-58748204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 145, 71 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:59052233-59052562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:63177935-63178264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:64337957-64337628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 135, 200 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:66566121-66566449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 187, 0 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:67430224-67429895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 145, 158 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:68871114-68870785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-399 | 
| Cow position: | chr6:12662515-12662184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-399 | 
| Cow position: | chr6:28000582-28000252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 139, 95 | 
| Conread position: | 76-399 | 
| Cow position: | chr6:45723309-45722971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 139, 149 | 
| Conread position: | 76-399 | 
| Cow position: | chr6:45901178-45900847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-399 | 
| Cow position: | chr6:62323367-62323031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-403 | 
| Cow position: | chr6:33852118-33851802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 232, 144 | 
| Conread position: | 76-404 | 
| Cow position: | chr6:10605349-10605684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 291 | 
| Conread position: | 76-405 | 
| Cow position: | chr6:24327470-24327144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 144 | 
| Conread position: | 76-405 | 
| Cow position: | chr6:32867541-32867217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 180 | 
| Conread position: | 76-405 | 
| Cow position: | chr6:50800745-50800412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 106, 6 | 
| Conread position: | 76-408 | 
| Cow position: | chr6:54647860-54647521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 45, 209 | 
| Conread position: | 76-409 | 
| Cow position: | chr6:46570791-46571117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 197, 16 | 
| Conread position: | 76-410 | 
| Cow position: | chr6:2546909-2547246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 184, 26 | 
| Conread position: | 76-410 | 
| Cow position: | chr6:55842495-55842154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 218, 187 | 
| Conread position: | 76-411 | 
| Cow position: | chr6:35872920-35872580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 126, 15 | 
| Conread position: | 76-411 | 
| Cow position: | chr6:55538458-55538122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 148, 135 | 
| Conread position: | 76-412 | 
| Cow position: | chr6:10598794-10599123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 239, 68 | 
| Conread position: | 76-412 | 
| Cow position: | chr6:66431510-66431827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 140, 180 | 
| Conread position: | 76-413 | 
| Cow position: | chr6:41162036-41161687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 76-413 | 
| Cow position: | chr6:48807322-48806990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 92, 6 | 
| Conread position: | 76-413 | 
| Cow position: | chr6:51718370-51718712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 145, 210 | 
| Conread position: | 76-413 | 
| Cow position: | chr6:55688714-55689046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 183, 6 | 
| Conread position: | 76-418 | 
| Cow position: | chr6:40450435-40450774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 146, 157 | 
| Conread position: | 76-452 | 
| Cow position: | chr6:10612528-10612895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 183, 82 | 
| Conread position: | 76-457 | 
| Cow position: | chr6:46633928-46634305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 62, 96 | 
| Conread position: | 76-460 | 
| Cow position: | chr6:13741363-13741750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 88 | 
| Conread position: | 76-461 | 
| Cow position: | chr6:3575104-3575492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 120, 204 | 
| Conread position: | 76-461 | 
| Cow position: | chr6:16737686-16738069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 197 | 
| Conread position: | 76-461 | 
| Cow position: | chr6:21312090-21311708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 96 | 
| Conread position: | 76-461 | 
| Cow position: | chr6:46205683-46206063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 209, 168 | 
| Conread position: | 76-461 | 
| Cow position: | chr6:66304174-66303790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 16 | 
| Conread position: | 76-463 | 
| Cow position: | chr6:6614100-6614491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 146, 122 | 
| Conread position: | 76-466 | 
| Cow position: | chr6:3978996-3978607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 114 | 
| Conread position: | 76-471 | 
| Cow position: | chr6:62665591-62665990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 139, 340 | 
| Conread position: | 76-472 | 
| Cow position: | chr6:126293-125893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-473 | 
| Cow position: | chr6:52424686-52425086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-475 | 
| Cow position: | chr6:10536124-10535719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 274 | 
| Conread position: | 76-475 | 
| Cow position: | chr6:34075692-34076093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 195, 96 | 
| Conread position: | 76-475 | 
| Cow position: | chr6:44372273-44371881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 139, 66 | 
| Conread position: | 76-475 | 
| Cow position: | chr6:45130258-45129853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-476 | 
| Cow position: | chr6:2898577-2898983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-476 | 
| Cow position: | chr6:14198461-14198865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 139, 116 | 
| Conread position: | 76-476 | 
| Cow position: | chr6:18502999-18502593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-476 | 
| Cow position: | chr6:22736891-22736489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 216, 135 | 
| Conread position: | 76-476 | 
| Cow position: | chr6:25095689-25096095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-476 | 
| Cow position: | chr6:25376073-25376480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 140, 201 | 
| Conread position: | 76-476 | 
| Cow position: | chr6:25410271-25410677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-476 | 
| Cow position: | chr6:27939592-27939998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-476 | 
| Cow position: | chr6:38061427-38061832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 148, 157 | 
| Conread position: | 76-476 | 
| Cow position: | chr6:45976314-45976720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-476 | 
| Cow position: | chr6:49685225-49685649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 120, 6 | 
| Conread position: | 76-476 | 
| Cow position: | chr6:56888227-56888624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 217, 143 | 
| Conread position: | 76-476 | 
| Cow position: | chr6:59834893-59835299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 139, 340 | 
| Conread position: | 76-477 | 
| Cow position: | chr6:16625613-16626011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 232, 195 | 
| Conread position: | 76-477 | 
| Cow position: | chr6:16675491-16675872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 232, 84 | 
| Conread position: | 76-477 | 
| Cow position: | chr6:17557040-17557449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 353 | 
| Conread position: | 76-477 | 
| Cow position: | chr6:45210959-45211367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-479 | 
| Cow position: | chr6:3095291-3094882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-479 | 
| Cow position: | chr6:6768942-6769350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 0 | 
| Conread position: | 76-479 | 
| Cow position: | chr6:8194955-8195366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 42, 267 | 
| Conread position: | 76-479 | 
| Cow position: | chr6:16417876-16417470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 140, 200 | 
| Conread position: | 76-479 | 
| Cow position: | chr6:26830342-26830746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-479 | 
| Cow position: | chr6:34842894-34842486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 145, 332 | 
| Conread position: | 76-479 | 
| Cow position: | chr6:37389124-37389533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-479 | 
| Cow position: | chr6:43999344-43998935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-479 | 
| Cow position: | chr6:47383667-47384076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 145, 50 | 
| Conread position: | 76-479 | 
| Cow position: | chr6:49794773-49795182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 139, 340 | 
| Conread position: | 76-479 | 
| Cow position: | chr6:54218337-54218741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 214, 199 | 
| Conread position: | 76-479 | 
| Cow position: | chr6:55239505-55239913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-479 | 
| Cow position: | chr6:59577014-59577422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 145, 113 | 
| Conread position: | 76-482 | 
| Cow position: | chr6:19427115-19427528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 117 | 
| Conread position: | 76-482 | 
| Cow position: | chr6:52002035-52002433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 146, 98 | 
| Conread position: | 76-485 | 
| Cow position: | chr6:28343316-28343723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 155, 122 | 
| Conread position: | 76-485 | 
| Cow position: | chr6:46391361-46391770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 232, 96 | 
| Conread position: | 76-485 | 
| Cow position: | chr6:46948627-46949041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 139, 333 | 
| Conread position: | 76-486 | 
| Cow position: | chr6:55594059-55594464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 134, 13 | 
| Conread position: | 76-488 | 
| Cow position: | chr6:25789922-25789505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 145, 200 | 
| Conread position: | 76-490 | 
| Cow position: | chr6:11638075-11637675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 83 | 
| Conread position: | 76-490 | 
| Cow position: | chr6:34016908-34016492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 139, 200 | 
| Conread position: | 76-493 | 
| Cow position: | chr6:28147921-28148340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 36 | 
| Conread position: | 76-502 | 
| Cow position: | chr6:65870690-65871131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 43 | 
| Conread position: | 76-502 | 
| Cow position: | chr6:66532137-66531728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 149 | 
| Conread position: | 76-503 | 
| Cow position: | chr6:6068023-6067607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 100 | 
| Conread position: | 76-503 | 
| Cow position: | chr6:16706675-16707107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 102 | 
| Conread position: | 76-503 | 
| Cow position: | chr6:31636022-31635593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 135 | 
| Conread position: | 76-503 | 
| Cow position: | chr6:52478777-52478316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 102, 213 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:323645-323209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 186 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:1944395-1944809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 146 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:2607279-2607702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 95 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:12550933-12551365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 182, 262 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:14958677-14958244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 41 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:16765727-16765300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 188 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:17414788-17414349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 190 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:28811330-28810902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 113, 202 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:35842326-35842754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 218, 135 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:40031858-40032286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 149 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:47339691-47339260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 206 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:48169610-48170034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 187 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:49398952-49398524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 199 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:51835068-51835495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 16 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:52431368-52430926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 349 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:53178304-53178725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 145 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:54140484-54140893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 213, 16 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:54867184-54867613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 43 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:55040552-55040118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 327 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:56842825-56843250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 231, 197 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:61269000-61269408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 142, 95 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:66433581-66434045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 106, 321 | 
| Conread position: | 76-504 | 
| Cow position: | chr6:67187362-67187780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 226, 75 | 
| Conread position: | 77-177 | 
| Cow position: | chr6:47988727-47988827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 101 | 
| Alignm identity: | 82 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 77-178 | 
| Cow position: | chr6:68048917-68049017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 102 | 
| Alignm identity: | 84 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 77-191 | 
| Cow position: | chr6:2894894-2895008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 77-191 | 
| Cow position: | chr6:30159509-30159623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 77-194 | 
| Cow position: | chr6:53140728-53140612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 17, 77 | 
| Conread position: | 77-199 | 
| Cow position: | chr6:24988315-24988193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 77-204 | 
| Cow position: | chr6:89439-89312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 77-204 | 
| Cow position: | chr6:529036-528905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 99, 0 | 
| Conread position: | 77-204 | 
| Cow position: | chr6:65931037-65931164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 45, 38 | 
| Conread position: | 77-205 | 
| Cow position: | chr6:34115682-34115810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 77-207 | 
| Cow position: | chr6:19695208-19695338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 77-207 | 
| Cow position: | chr6:21396402-21396276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 77-210 | 
| Cow position: | chr6:61136834-61136964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 77-214 | 
| Cow position: | chr6:31927716-31927850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 77-220 | 
| Cow position: | chr6:3885691-3885547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 77-220 | 
| Cow position: | chr6:40975979-40976122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 77-222 | 
| Cow position: | chr6:39093428-39093571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 27, 135 | 
| Conread position: | 77-225 | 
| Cow position: | chr6:5944635-5944487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 77-228 | 
| Cow position: | chr6:21608162-21608308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 77-241 | 
| Cow position: | chr6:50625278-50625445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 77-242 | 
| Cow position: | chr6:16230563-16230720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 139, 91 | 
| Conread position: | 77-242 | 
| Cow position: | chr6:21732444-21732277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 43, 138 | 
| Conread position: | 77-245 | 
| Cow position: | chr6:33451637-33451802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 45, 20 | 
| Conread position: | 77-245 | 
| Cow position: | chr6:60673214-60673381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 132, 0 | 
| Conread position: | 77-253 | 
| Cow position: | chr6:20245750-20245927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 138, 0 | 
| Conread position: | 77-254 | 
| Cow position: | chr6:37598030-37598203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 82, 106 | 
| Conread position: | 77-294 | 
| Cow position: | chr6:28504009-28504233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 125, 49 | 
| Conread position: | 77-302 | 
| Cow position: | chr6:43345788-43345569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 200, 113 | 
| Conread position: | 77-303 | 
| Cow position: | chr6:56501978-56502201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 105, 56 | 
| Conread position: | 77-307 | 
| Cow position: | chr6:32854593-32854384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 77-308 | 
| Cow position: | chr6:11442156-11441928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 207, 144 | 
| Conread position: | 77-322 | 
| Cow position: | chr6:60516394-60516646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 115, 189 | 
| Conread position: | 77-330 | 
| Cow position: | chr6:52216089-52215841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 105, 149 | 
| Conread position: | 77-330 | 
| Cow position: | chr6:52235580-52235332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 105, 149 | 
| Conread position: | 77-334 | 
| Cow position: | chr6:33215711-33215442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 141, 52 | 
| Conread position: | 77-335 | 
| Cow position: | chr6:36918501-36918247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 139, 53 | 
| Conread position: | 77-335 | 
| Cow position: | chr6:48468468-48468733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 77-340 | 
| Cow position: | chr6:33147728-33147992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 144, 95 | 
| Conread position: | 77-349 | 
| Cow position: | chr6:14063992-14063720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 176, 182 | 
| Conread position: | 77-349 | 
| Cow position: | chr6:47848034-47847757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 138, 105 | 
| Conread position: | 77-353 | 
| Cow position: | chr6:14690620-14690901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 144, 48 | 
| Conread position: | 77-355 | 
| Cow position: | chr6:54963704-54963429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 194, 153 | 
| Conread position: | 77-356 | 
| Cow position: | chr6:28180298-28180021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 140, 97 | 
| Conread position: | 77-365 | 
| Cow position: | chr6:17865206-17865497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 141, 116 | 
| Conread position: | 77-365 | 
| Cow position: | chr6:42267533-42267818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 143, 95 | 
| Conread position: | 77-367 | 
| Cow position: | chr6:29077395-29077689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 109, 70 | 
| Conread position: | 77-367 | 
| Cow position: | chr6:55903899-55904197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 135, 0 | 
| Conread position: | 77-371 | 
| Cow position: | chr6:6187931-6188218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 225, 65 | 
| Conread position: | 77-379 | 
| Cow position: | chr6:55608140-55607841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 198 | 
| Conread position: | 77-380 | 
| Cow position: | chr6:49627020-49627333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 105, 194 | 
| Conread position: | 77-393 | 
| Cow position: | chr6:21831844-21831530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 106, 153 | 
| Conread position: | 77-397 | 
| Cow position: | chr6:8207682-8207354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 138, 199 | 
| Conread position: | 77-399 | 
| Cow position: | chr6:7137527-7137197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 5, 199 | 
| Conread position: | 77-401 | 
| Cow position: | chr6:24902470-24902151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 138, 13 | 
| Conread position: | 77-403 | 
| Cow position: | chr6:12387654-12387330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 112 | 
| Conread position: | 77-405 | 
| Cow position: | chr6:1891195-1890847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 85, 69 | 
| Conread position: | 77-405 | 
| Cow position: | chr6:23695664-23695991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 196 | 
| Conread position: | 77-407 | 
| Cow position: | chr6:33302077-33302410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 74 | 
| Conread position: | 77-410 | 
| Cow position: | chr6:24649521-24649854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 194, 21 | 
| Conread position: | 77-410 | 
| Cow position: | chr6:31879696-31879382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 77-410 | 
| Cow position: | chr6:32210960-32210627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 28 | 
| Conread position: | 77-410 | 
| Cow position: | chr6:54806889-54807230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 138, 195 | 
| Conread position: | 77-411 | 
| Cow position: | chr6:12927789-12928122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 84 | 
| Conread position: | 77-411 | 
| Cow position: | chr6:52556805-52556472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 139, 97 | 
| Conread position: | 77-412 | 
| Cow position: | chr6:41824162-41823817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 135, 276 | 
| Conread position: | 77-429 | 
| Cow position: | chr6:1174835-1174464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 194, 115 | 
| Conread position: | 77-437 | 
| Cow position: | chr6:3017105-3017476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 102, 154 | 
| Conread position: | 77-438 | 
| Cow position: | chr6:56849668-56850044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 70, 195 | 
| Conread position: | 77-453 | 
| Cow position: | chr6:66199456-66199834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 41, 65 | 
| Conread position: | 77-456 | 
| Cow position: | chr6:58075894-58076275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 228, 95 | 
| Conread position: | 77-457 | 
| Cow position: | chr6:67544626-67544250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 197 | 
| Conread position: | 77-460 | 
| Cow position: | chr6:47540191-47540580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 291 | 
| Conread position: | 77-460 | 
| Cow position: | chr6:60456497-60456878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 103 | 
| Conread position: | 77-461 | 
| Cow position: | chr6:5958349-5957978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 205, 67 | 
| Conread position: | 77-467 | 
| Cow position: | chr6:37634457-37634845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 329, 15 | 
| Conread position: | 77-468 | 
| Cow position: | chr6:14839360-14838968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 218, 152 | 
| Conread position: | 77-471 | 
| Cow position: | chr6:36928319-36928721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 183, 102 | 
| Conread position: | 77-475 | 
| Cow position: | chr6:25358743-25359126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 208, 143 | 
| Conread position: | 77-477 | 
| Cow position: | chr6:642927-642502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 42, 349 | 
| Conread position: | 77-478 | 
| Cow position: | chr6:8753642-8753236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 144, 12 | 
| Conread position: | 77-479 | 
| Cow position: | chr6:7994815-7994398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 57, 109 | 
| Conread position: | 77-479 | 
| Cow position: | chr6:10695526-10695935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 96, 30 | 
| Conread position: | 77-479 | 
| Cow position: | chr6:43188559-43188964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 178, 345 | 
| Conread position: | 77-481 | 
| Cow position: | chr6:24652514-24652122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 113 | 
| Conread position: | 77-490 | 
| Cow position: | chr6:40774704-40774251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 104, 277 | 
| Conread position: | 77-492 | 
| Cow position: | chr6:24583570-24583138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 5, 59 | 
| Conread position: | 77-493 | 
| Cow position: | chr6:606928-607347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 297 | 
| Conread position: | 77-494 | 
| Cow position: | chr6:8318499-8318075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 92 | 
| Conread position: | 77-494 | 
| Cow position: | chr6:67968965-67968525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 68, 179 | 
| Conread position: | 77-498 | 
| Cow position: | chr6:6343094-6343516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 72 | 
| Conread position: | 77-500 | 
| Cow position: | chr6:8804877-8804439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 73 | 
| Conread position: | 77-500 | 
| Cow position: | chr6:11192785-11192372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 15 | 
| Conread position: | 77-501 | 
| Cow position: | chr6:63047243-63047685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 141, 58 | 
| Conread position: | 77-502 | 
| Cow position: | chr6:24004213-24004630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 138 | 
| Conread position: | 77-503 | 
| Cow position: | chr6:28476843-28477263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 34, 201 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:456847-457271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 42 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:1770528-1770102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 29 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:4468426-4468864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 43, 100 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:5302733-5302324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 144, 93 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:6060891-6060476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 187 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:6944007-6943584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 194, 27 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:7801697-7801301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 332, 28 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:8562382-8562816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 263 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:15242520-15242932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 53 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:21004322-21004772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 127 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:32125733-32126152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 266 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:36652096-36652518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 228, 70 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:42565352-42565784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 164 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:44078183-44078610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 32 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:47304994-47305437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 127 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:53933183-53932751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 69, 151 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:55474916-55475351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 228, 134 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:58073709-58074144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 438 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 264 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:59597323-59597744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 194 | 
| Conread position: | 77-504 | 
| Cow position: | chr6:67214408-67214845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 178, 324 | 
| Conread position: | 78-180 | 
| Cow position: | chr6:30473953-30474055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 103 | 
| Alignm identity: | 83 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 78-180 | 
| Cow position: | chr6:59620307-59620410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 104 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 78-222 | 
| Cow position: | chr6:19103092-19102945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 78-222 | 
| Cow position: | chr6:37148489-37148633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 140, 117 | 
| Conread position: | 78-301 | 
| Cow position: | chr6:4389528-4389739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 78-345 | 
| Cow position: | chr6:54357709-54357437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 8, 147 | 
| Conread position: | 78-353 | 
| Cow position: | chr6:1293598-1293331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 117, 73 | 
| Conread position: | 78-382 | 
| Cow position: | chr6:452296-452611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 15, 201 | 
| Conread position: | 78-382 | 
| Cow position: | chr6:51869752-51870063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 137, 186 | 
| Conread position: | 78-385 | 
| Cow position: | chr6:12947687-12947372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 137, 198 | 
| Conread position: | 78-394 | 
| Cow position: | chr6:36195881-36196198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 196 | 
| Conread position: | 78-397 | 
| Cow position: | chr6:36532092-36532418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 139, 17 | 
| Conread position: | 78-397 | 
| Cow position: | chr6:60877112-60877439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 143, 0 | 
| Conread position: | 78-401 | 
| Cow position: | chr6:46465495-46465816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 186 | 
| Conread position: | 78-452 | 
| Cow position: | chr6:51674577-51674951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 178 | 
| Conread position: | 78-458 | 
| Cow position: | chr6:12629681-12630068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 76, 206 | 
| Conread position: | 78-472 | 
| Cow position: | chr6:50120119-50119721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 95 | 
| Conread position: | 78-479 | 
| Cow position: | chr6:36470898-36470492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 188 | 
| Conread position: | 78-498 | 
| Cow position: | chr6:44098755-44099175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 206, 100 | 
| Conread position: | 78-504 | 
| Cow position: | chr6:18987886-18988304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 19 | 
| Conread position: | 78-504 | 
| Cow position: | chr6:24781897-24781463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 196 | 
| Conread position: | 78-504 | 
| Cow position: | chr6:35103657-35103232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 223, 97 | 
| Conread position: | 79-297 | 
| Cow position: | chr6:61180763-61180550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 48, 101 | 
| Conread position: | 79-395 | 
| Cow position: | chr6:1784097-1783790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 82 | 
| Conread position: | 80-492 | 
| Cow position: | chr6:561289-561707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 142, 94 | 
| Conread position: | 81-184 | 
| Cow position: | chr6:50983853-50983956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 104 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 81-207 | 
| Cow position: | chr6:50571988-50572114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 81-208 | 
| Cow position: | chr6:47150085-47150213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 35, 14 | 
| Conread position: | 81-219 | 
| Cow position: | chr6:33918468-33918329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 109, 45 | 
| Conread position: | 81-219 | 
| Cow position: | chr6:65920939-65920801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 81-222 | 
| Cow position: | chr6:19712429-19712288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 134, 70 | 
| Conread position: | 81-223 | 
| Cow position: | chr6:1264279-1264421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 81-225 | 
| Cow position: | chr6:7216502-7216646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 81-234 | 
| Cow position: | chr6:30892849-30892697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 81-294 | 
| Cow position: | chr6:38993971-38993767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 138, 0 | 
| Conread position: | 81-297 | 
| Cow position: | chr6:65016219-65016004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 135, 11 | 
| Conread position: | 81-311 | 
| Cow position: | chr6:33466774-33466994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 65, 93 | 
| Conread position: | 81-348 | 
| Cow position: | chr6:43621836-43622111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 81-349 | 
| Cow position: | chr6:34111264-34110989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 134, 195 | 
| Conread position: | 81-349 | 
| Cow position: | chr6:48794335-48794058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 40, 28 | 
| Conread position: | 81-358 | 
| Cow position: | chr6:61548907-61548640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 208, 140 | 
| Conread position: | 81-367 | 
| Cow position: | chr6:51733901-51734190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 140, 93 | 
| Conread position: | 81-382 | 
| Cow position: | chr6:21719110-21718801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 134, 195 | 
| Conread position: | 81-382 | 
| Cow position: | chr6:40278872-40279181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 81-388 | 
| Cow position: | chr6:13693913-13693610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 217, 74 | 
| Conread position: | 81-393 | 
| Cow position: | chr6:43404260-43404579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 134, 195 | 
| Conread position: | 81-395 | 
| Cow position: | chr6:19570115-19569795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 135, 111 | 
| Conread position: | 81-399 | 
| Cow position: | chr6:596066-595740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 134, 195 | 
| Conread position: | 81-469 | 
| Cow position: | chr6:14696704-14696315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 308 | 
| Conread position: | 81-472 | 
| Cow position: | chr6:16410866-16411252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 192, 0 | 
| Conread position: | 81-472 | 
| Cow position: | chr6:61257679-61258075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 129, 336 | 
| Conread position: | 81-477 | 
| Cow position: | chr6:54980772-54981177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 140, 344 | 
| Conread position: | 81-479 | 
| Cow position: | chr6:33460762-33461160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 141, 44 | 
| Conread position: | 81-492 | 
| Cow position: | chr6:11169378-11169781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 191, 138 | 
| Conread position: | 81-493 | 
| Cow position: | chr6:35613757-35613334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 124, 131 | 
| Conread position: | 81-503 | 
| Cow position: | chr6:66363574-66363140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 193 | 
| Conread position: | 81-504 | 
| Cow position: | chr6:10176628-10176206 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 194, 90 | 
| Conread position: | 81-504 | 
| Cow position: | chr6:42518640-42519085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 78, 188 | 
| Conread position: | 82-245 | 
| Cow position: | chr6:42106377-42106218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 82-297 | 
| Cow position: | chr6:35132837-35133052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 130, 174 | 
| Conread position: | 82-382 | 
| Cow position: | chr6:31568028-31567720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 133, 171 | 
| Conread position: | 82-393 | 
| Cow position: | chr6:21712527-21712846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 133, 194 | 
| Conread position: | 82-398 | 
| Cow position: | chr6:28791505-28791827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 139, 72 | 
| Conread position: | 82-412 | 
| Cow position: | chr6:17345014-17345371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 62, 299 | 
| Conread position: | 82-461 | 
| Cow position: | chr6:65904596-65904225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 59, 31 | 
| Conread position: | 82-504 | 
| Cow position: | chr6:46292661-46292252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 125 | 
| Conread position: | 82-504 | 
| Cow position: | chr6:65903945-65903528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 59, 31 | 
| Conread position: | 83-478 | 
| Cow position: | chr6:10459410-10459811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 138, 52 | 
| Conread position: | 84-222 | 
| Cow position: | chr6:38776274-38776413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 131, 0 | 
| Conread position: | 84-239 | 
| Cow position: | chr6:63094480-63094636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 126, 0 | 
| Conread position: | 84-245 | 
| Cow position: | chr6:47317587-47317748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 132, 48 | 
| Conread position: | 84-293 | 
| Cow position: | chr6:19841949-19841741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 187, 0 | 
| Conread position: | 84-307 | 
| Cow position: | chr6:16397509-16397293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 132, 164 | 
| Conread position: | 84-311 | 
| Cow position: | chr6:61443427-61443205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 132, 87 | 
| Conread position: | 84-349 | 
| Cow position: | chr6:51071377-51071655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 84-365 | 
| Cow position: | chr6:3936220-3936495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 188, 87 | 
| Conread position: | 84-392 | 
| Cow position: | chr6:64426864-64427173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 131, 108 | 
| Conread position: | 84-475 | 
| Cow position: | chr6:18961847-18961451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 194, 59 | 
| Conread position: | 84-481 | 
| Cow position: | chr6:5445321-5445695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 134, 77 | 
| Conread position: | 84-492 | 
| Cow position: | chr6:34549082-34549485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 96, 138 | 
| Conread position: | 84-504 | 
| Cow position: | chr6:25407733-25407295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 186 | 
| Conread position: | 85-222 | 
| Cow position: | chr6:62808833-62808971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 131, 0 | 
| Conread position: | 85-370 | 
| Cow position: | chr6:10649344-10649062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 220, 144 | 
| Conread position: | 85-401 | 
| Cow position: | chr6:65711501-65711817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 273 | 
| Conread position: | 85-486 | 
| Cow position: | chr6:50446085-50445691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 190, 142 | 
| Conread position: | 85-501 | 
| Cow position: | chr6:6642914-6642515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 216, 137 | 
| Conread position: | 85-503 | 
| Cow position: | chr6:27852030-27851610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 218, 188 | 
| Conread position: | 85-504 | 
| Cow position: | chr6:18049351-18048928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 220, 175 | 
| Conread position: | 86-222 | 
| Cow position: | chr6:63716080-63716216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 86-228 | 
| Cow position: | chr6:24074891-24074749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 86-301 | 
| Cow position: | chr6:12515829-12516035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 53, 114 | 
| Conread position: | 86-308 | 
| Cow position: | chr6:20689651-20689431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 86-334 | 
| Cow position: | chr6:29284370-29284622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 130, 36 | 
| Conread position: | 86-364 | 
| Cow position: | chr6:14827004-14827283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 127, 36 | 
| Conread position: | 86-367 | 
| Cow position: | chr6:12934464-12934180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 126, 75 | 
| Conread position: | 86-410 | 
| Cow position: | chr6:45617764-45617434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 130, 11 | 
| Conread position: | 86-413 | 
| Cow position: | chr6:13688135-13687810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 35 | 
| Conread position: | 86-460 | 
| Cow position: | chr6:23987062-23986696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 48, 188 | 
| Conread position: | 86-472 | 
| Cow position: | chr6:5672905-5673308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 130, 57 | 
| Conread position: | 86-504 | 
| Cow position: | chr6:19681841-19681429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 196, 104 | 
| Conread position: | 87-227 | 
| Cow position: | chr6:40238403-40238262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 106, 0 | 
| Conread position: | 87-311 | 
| Cow position: | chr6:37393037-37392819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 87-341 | 
| Cow position: | chr6:37390690-37390954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 95, 179 | 
| Conread position: | 87-348 | 
| Cow position: | chr6:12116374-12116106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 198, 26 | 
| Conread position: | 87-349 | 
| Cow position: | chr6:6167079-6167339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 129, 113 | 
| Conread position: | 87-349 | 
| Cow position: | chr6:42693039-42693307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 103, 130 | 
| Conread position: | 87-366 | 
| Cow position: | chr6:20056308-20056594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 32, 19 | 
| Conread position: | 87-441 | 
| Cow position: | chr6:57685835-57686185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 134, 197 | 
| Conread position: | 88-221 | 
| Cow position: | chr6:62578610-62578744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 127, 0 | 
| Conread position: | 88-352 | 
| Cow position: | chr6:20255703-20255445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 133, 74 | 
| Conread position: | 91-289 | 
| Cow position: | chr6:62979561-62979363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 124, 7 | 
| Conread position: | 92-239 | 
| Cow position: | chr6:21302300-21302445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 130, 80 | 
| Conread position: | 92-245 | 
| Cow position: | chr6:28322498-28322344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 127, 0 | 
| Conread position: | 92-348 | 
| Cow position: | chr6:25783994-25784252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 125, 139 | 
| Conread position: | 92-355 | 
| Cow position: | chr6:57597318-57597046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 62, 171 | 
| Conread position: | 92-393 | 
| Cow position: | chr6:4681437-4681741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 43, 116 | 
| Conread position: | 92-465 | 
| Cow position: | chr6:44510916-44511302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 104, 185 | 
| Conread position: | 92-502 | 
| Cow position: | chr6:35181571-35181163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 66 | 
| Conread position: | 92-504 | 
| Cow position: | chr6:32121592-32122003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 157 | 
| Conread position: | 92-504 | 
| Cow position: | chr6:45596843-45596436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 102, 70 | 
| Conread position: | 93-253 | 
| Cow position: | chr6:1733833-1733671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 93-297 | 
| Cow position: | chr6:4155857-4155651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 93, 49 | 
| Conread position: | 93-297 | 
| Cow position: | chr6:37762071-37762275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 123, 169 | 
| Conread position: | 93-307 | 
| Cow position: | chr6:40497255-40497473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 109, 167 | 
| Conread position: | 93-367 | 
| Cow position: | chr6:1538486-1538759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 197, 93 | 
| Conread position: | 93-410 | 
| Cow position: | chr6:60152718-60153039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 123, 179 | 
| Conread position: | 93-503 | 
| Cow position: | chr6:35990546-35990139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 95 | 
| Conread position: | 93-504 | 
| Cow position: | chr6:5095872-5095446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 185 | 
| Conread position: | 94-356 | 
| Cow position: | chr6:15137337-15137071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 127, 182 | 
| Conread position: | 94-382 | 
| Cow position: | chr6:2875212-2874916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 121, 182 | 
| Conread position: | 94-460 | 
| Cow position: | chr6:47625275-47624912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 152, 24 | 
| Conread position: | 94-461 | 
| Cow position: | chr6:20231142-20230776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 142 | 
| Conread position: | 94-479 | 
| Cow position: | chr6:25822320-25821935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 222, 181 | 
| Conread position: | 94-504 | 
| Cow position: | chr6:16699945-16700357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 77 | 
| Conread position: | 94-504 | 
| Cow position: | chr6:60859620-60859205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 128, 82 | 
| Conread position: | 94-504 | 
| Cow position: | chr6:64431625-64432034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 78 | 
| Conread position: | 95-214 | 
| Cow position: | chr6:51968849-51968967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 95-246 | 
| Cow position: | chr6:27887739-27887893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 95-309 | 
| Cow position: | chr6:54841219-54840996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 95-382 | 
| Cow position: | chr6:36299494-36299199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 120, 181 | 
| Conread position: | 96-223 | 
| Cow position: | chr6:16430737-16430610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 96-232 | 
| Cow position: | chr6:22746342-22746476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 125, 53 | 
| Conread position: | 96-245 | 
| Cow position: | chr6:32461881-32461731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 96-311 | 
| Cow position: | chr6:44906170-44906385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 52, 103 | 
| Conread position: | 96-328 | 
| Cow position: | chr6:6117871-6117629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 86, 185 | 
| Conread position: | 96-330 | 
| Cow position: | chr6:52120925-52121161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 125, 85 | 
| Conread position: | 96-333 | 
| Cow position: | chr6:32858582-32858824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 27, 51 | 
| Conread position: | 96-367 | 
| Cow position: | chr6:55573422-55573148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 126, 168 | 
| Conread position: | 96-368 | 
| Cow position: | chr6:38594815-38594544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 120, 61 | 
| Conread position: | 96-380 | 
| Cow position: | chr6:30285374-30285662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 83, 115 | 
| Conread position: | 96-405 | 
| Cow position: | chr6:32916235-32915927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 120, 194 | 
| Conread position: | 97-207 | 
| Cow position: | chr6:37468428-37468318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 97-269 | 
| Cow position: | chr6:41357485-41357657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 97-297 | 
| Cow position: | chr6:61066772-61066972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 52, 135 | 
| Conread position: | 97-304 | 
| Cow position: | chr6:60344045-60344251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 45, 152 | 
| Conread position: | 97-503 | 
| Cow position: | chr6:12337671-12338088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 208, 174 | 
| Conread position: | 98-219 | 
| Cow position: | chr6:50042793-50042914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 98-228 | 
| Cow position: | chr6:52308021-52308157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 98-228 | 
| Cow position: | chr6:54447742-54447613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 98-393 | 
| Cow position: | chr6:43014494-43014191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 124, 178 | 
| Conread position: | 98-401 | 
| Cow position: | chr6:58439668-58439954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 117, 91 | 
| Conread position: | 99-369 | 
| Cow position: | chr6:28559109-28559385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 155, 7 | 
| Conread position: | 100-344 | 
| Cow position: | chr6:60467717-60467960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 205, 122 | 
| Conread position: | 101-212 | 
| Cow position: | chr6:34693270-34693381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 101-222 | 
| Cow position: | chr6:50527772-50527650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 114, 0 | 
| Conread position: | 101-301 | 
| Cow position: | chr6:68127144-68127344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 120, 163 | 
| Conread position: | 101-330 | 
| Cow position: | chr6:27942730-27942960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 193, 132 | 
| Conread position: | 101-411 | 
| Cow position: | chr6:4022795-4023098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 34, 94 | 
| Conread position: | 101-504 | 
| Cow position: | chr6:9008917-9008516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 84 | 
| Conread position: | 102-241 | 
| Cow position: | chr6:65891241-65891101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 114, 0 | 
| Conread position: | 102-391 | 
| Cow position: | chr6:51296527-51296231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 119, 53 | 
| Conread position: | 102-423 | 
| Cow position: | chr6:40264508-40264184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 13, 46 | 
| Conread position: | 102-504 | 
| Cow position: | chr6:38770990-38771376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 66, 15 | 
| Conread position: | 105-238 | 
| Cow position: | chr6:7010415-7010283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 116, 73 | 
| Conread position: | 105-242 | 
| Cow position: | chr6:1104354-1104217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 116, 47 | 
| Conread position: | 105-245 | 
| Cow position: | chr6:67044665-67044805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 111, 38 | 
| Conread position: | 105-305 | 
| Cow position: | chr6:61519138-61519338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 107, 151 | 
| Conread position: | 105-310 | 
| Cow position: | chr6:16492220-16492023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 111, 47 | 
| Conread position: | 105-347 | 
| Cow position: | chr6:5329849-5330090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 37, 44 | 
| Conread position: | 105-375 | 
| Cow position: | chr6:16618862-16619117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 206, 61 | 
| Conread position: | 105-413 | 
| Cow position: | chr6:12500551-12500863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 278 | 
| Conread position: | 105-487 | 
| Cow position: | chr6:7312286-7312670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 90, 56 | 
| Conread position: | 105-503 | 
| Cow position: | chr6:48567648-48567257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 110, 203 | 
| Conread position: | 105-504 | 
| Cow position: | chr6:46557752-46558153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 102 | 
| Conread position: | 106-204 | 
| Cow position: | chr6:39286409-39286311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 99 | 
| Alignm identity: | 81 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 106-276 | 
| Cow position: | chr6:56596970-56597140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 106-356 | 
| Cow position: | chr6:47039378-47039130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 96, 131 | 
| Conread position: | 107-220 | 
| Cow position: | chr6:7174813-7174700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 114 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 107-228 | 
| Cow position: | chr6:21300825-21300704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 107-355 | 
| Cow position: | chr6:60017766-60018013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 111, 74 | 
| Conread position: | 108-223 | 
| Cow position: | chr6:45775700-45775585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 108-504 | 
| Cow position: | chr6:31525749-31526142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 64 | 
| Conread position: | 109-380 | 
| Cow position: | chr6:56926895-56927174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 112, 167 | 
| Conread position: | 109-410 | 
| Cow position: | chr6:57504462-57504765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 65, 102 | 
| Conread position: | 110-222 | 
| Cow position: | chr6:34393716-34393604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 110-222 | 
| Cow position: | chr6:41214386-41214499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 114 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 105, 0 | 
| Conread position: | 110-410 | 
| Cow position: | chr6:61575303-61575610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 111, 126 | 
| Conread position: | 110-491 | 
| Cow position: | chr6:52248431-52248050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 71, 27 | 
| Conread position: | 111-393 | 
| Cow position: | chr6:6239867-6240140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 82, 110 | 
| Conread position: | 111-504 | 
| Cow position: | chr6:47519751-47520149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 179, 102 | 
| Conread position: | 111-504 | 
| Cow position: | chr6:53401071-53401453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 74 | 
| Conread position: | 112-222 | 
| Cow position: | chr6:12913785-12913674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 103, 0 | 
| Conread position: | 112-353 | 
| Cow position: | chr6:61162416-61162656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 106, 64 | 
| Conread position: | 112-387 | 
| Cow position: | chr6:19508730-19508461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 70, 136 | 
| Conread position: | 112-502 | 
| Cow position: | chr6:60057964-60057561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 94 | 
| Conread position: | 113-410 | 
| Cow position: | chr6:58172890-58173184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 103, 59 | 
| Conread position: | 114-222 | 
| Cow position: | chr6:23545763-23545654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 114-502 | 
| Cow position: | chr6:63272914-63272517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 163 | 
| Conread position: | 115-355 | 
| Cow position: | chr6:12389803-12390046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 140, 96 | 
| Conread position: | 116-504 | 
| Cow position: | chr6:21590423-21590803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 100, 65 | 
| Conread position: | 117-382 | 
| Cow position: | chr6:38257449-38257176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 118-382 | 
| Cow position: | chr6:47387203-47387477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 87, 160 | 
| Conread position: | 119-223 | 
| Cow position: | chr6:6136597-6136703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 107 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 119-475 | 
| Cow position: | chr6:38233691-38234023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 30, 72 | 
| Conread position: | 119-504 | 
| Cow position: | chr6:34196440-34196054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 145 | 
| Conread position: | 119-504 | 
| Cow position: | chr6:54369188-54368808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 57 | 
| Conread position: | 120-353 | 
| Cow position: | chr6:7131162-7130935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 96, 128 | 
| Conread position: | 121-220 | 
| Cow position: | chr6:20951669-20951768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 100 | 
| Alignm identity: | 82 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 121-405 | 
| Cow position: | chr6:26696897-26696606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 155, 142 | 
| Conread position: | 122-386 | 
| Cow position: | chr6:19330043-19329771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 92, 54 | 
| Conread position: | 122-461 | 
| Cow position: | chr6:62479454-62479110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 0 | 
| Conread position: | 124-361 | 
| Cow position: | chr6:6201161-6201394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 157, 48 | 
| Conread position: | 125-379 | 
| Cow position: | chr6:69500044-69500295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 96, 131 | 
| Conread position: | 125-504 | 
| Cow position: | chr6:38218378-38218762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 143 | 
| Conread position: | 125-504 | 
| Cow position: | chr6:57164141-57164525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 56, 107 | 
| Conread position: | 126-504 | 
| Cow position: | chr6:51387481-51387845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 341, 54 | 
| Conread position: | 128-349 | 
| Cow position: | chr6:49442807-49443027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 93, 136 | 
| Conread position: | 128-479 | 
| Cow position: | chr6:55577883-55578234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 127, 102 | 
| Conread position: | 128-493 | 
| Cow position: | chr6:6264363-6264737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 37, 50 | 
| Conread position: | 129-227 | 
| Cow position: | chr6:25072452-25072550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 99 | 
| Alignm identity: | 82 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 129-402 | 
| Cow position: | chr6:57411361-57411627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 13, 131 | 
| Conread position: | 130-359 | 
| Cow position: | chr6:32024618-32024387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 85, 19 | 
| Conread position: | 130-383 | 
| Cow position: | chr6:21534778-21535031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 134 | 
| Conread position: | 131-504 | 
| Cow position: | chr6:22332678-22332302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 85, 254 | 
| Conread position: | 131-504 | 
| Cow position: | chr6:57119207-57118845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 87, 44 | 
| Conread position: | 132-247 | 
| Cow position: | chr6:67573846-67573959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 132-466 | 
| Cow position: | chr6:56808368-56808030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 83, 144 | 
| Conread position: | 134-297 | 
| Cow position: | chr6:60274500-60274338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 129, 0 | 
| Conread position: | 134-302 | 
| Cow position: | chr6:3591849-3592014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 82, 38 | 
| Conread position: | 134-365 | 
| Cow position: | chr6:34235711-34235477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 48, 151 | 
| Conread position: | 134-382 | 
| Cow position: | chr6:44705618-44705362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 134-472 | 
| Cow position: | chr6:32298745-32298404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 81, 100 | 
| Conread position: | 134-493 | 
| Cow position: | chr6:40713775-40713419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 121, 26 | 
| Conread position: | 135-393 | 
| Cow position: | chr6:2833151-2832889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 86, 141 | 
| Conread position: | 136-472 | 
| Cow position: | chr6:47150504-47150853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 69, 144 | 
| Conread position: | 138-393 | 
| Cow position: | chr6:55173053-55173324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 78, 97 | 
| Conread position: | 138-500 | 
| Cow position: | chr6:42961640-42961271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 77, 242 | 
| Conread position: | 138-503 | 
| Cow position: | chr6:27240251-27239911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 84, 33 | 
| Conread position: | 138-504 | 
| Cow position: | chr6:50746704-50747093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 42, 114 | 
| Conread position: | 138-504 | 
| Cow position: | chr6:54365596-54365232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 92 | 
| Conread position: | 138-504 | 
| Cow position: | chr6:60473861-60474226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 74, 144 | 
| Conread position: | 143-379 | 
| Cow position: | chr6:32337142-32337364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 73, 59 | 
| Conread position: | 143-401 | 
| Cow position: | chr6:35471794-35471526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 72, 200 | 
| Conread position: | 143-468 | 
| Cow position: | chr6:59688570-59688242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 139, 272 | 
| Conread position: | 143-504 | 
| Cow position: | chr6:48281727-48282088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 72, 234 | 
| Conread position: | 146-355 | 
| Cow position: | chr6:13603202-13603414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 138, 76 | 
| Conread position: | 146-360 | 
| Cow position: | chr6:35769747-35769530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 71, 129 | 
| Conread position: | 147-504 | 
| Cow position: | chr6:61515461-61515092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 116 | 
| Conread position: | 149-452 | 
| Cow position: | chr6:54293849-54294143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 70, 115 | 
| Conread position: | 154-455 | 
| Cow position: | chr6:64449135-64449434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 59, 101 | 
| Conread position: | 156-493 | 
| Cow position: | chr6:3952270-3952602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 151, 68 | 
| Conread position: | 157-363 | 
| Cow position: | chr6:17068074-17067863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 20, 117 | 
| Conread position: | 159-363 | 
| Cow position: | chr6:11829914-11830126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 57, 183 | 
| Conread position: | 161-460 | 
| Cow position: | chr6:24223410-24223105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 46, 25 | 
| Conread position: | 161-504 | 
| Cow position: | chr6:26915080-26915424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 60, 114 | 
| Conread position: | 162-349 | 
| Cow position: | chr6:3719257-3719061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 51, 88 | 
| Conread position: | 162-411 | 
| Cow position: | chr6:65676008-65676257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 53, 196 | 
| Conread position: | 162-458 | 
| Cow position: | chr6:53710867-53711162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 22, 68 | 
| Conread position: | 162-504 | 
| Cow position: | chr6:27110344-27110693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 16, 21 | 
| Conread position: | 163-369 | 
| Cow position: | chr6:54132571-54132778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 53, 13 | 
| Conread position: | 166-364 | 
| Cow position: | chr6:1002479-1002277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 50, 37 | 
| Conread position: | 166-410 | 
| Cow position: | chr6:38853903-38853654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 54, 174 | 
| Conread position: | 168-503 | 
| Cow position: | chr6:54991235-54990906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 127, 55 | 
| Conread position: | 170-379 | 
| Cow position: | chr6:9736880-9736673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 105, 51 | 
| Conread position: | 170-379 | 
| Cow position: | chr6:61113509-61113728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 45, 104 | 
| Conread position: | 170-401 | 
| Cow position: | chr6:40138946-40138723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 51, 94 | 
| Conread position: | 170-412 | 
| Cow position: | chr6:7103476-7103226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 46, 33 | 
| Conread position: | 172-504 | 
| Cow position: | chr6:20098203-20097863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 45, 102 | 
| Conread position: | 174-379 | 
| Cow position: | chr6:13040215-13040428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 43, 101 | 
| Conread position: | 174-393 | 
| Cow position: | chr6:34251512-34251303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 105, 37 | 
| Conread position: | 174-504 | 
| Cow position: | chr6:54600131-54600444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 14, 48 | 
| Conread position: | 177-489 | 
| Cow position: | chr6:21542085-21542403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 5, 99 | 
| Conread position: | 177-504 | 
| Cow position: | chr6:3929088-3929414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 5, 16 | 
| Conread position: | 178-401 | 
| Cow position: | chr6:54885146-54884917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 39, 97 | 
| Conread position: | 181-461 | 
| Cow position: | chr6:45160519-45160248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 96, 11 | 
| Conread position: | 182-500 | 
| Cow position: | chr6:49002953-49002648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 103, 74 | 
| Conread position: | 182-503 | 
| Cow position: | chr6:130393-130068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 108, 91 | 
| Conread position: | 182-504 | 
| Cow position: | chr6:34475772-34475465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 65, 39 | 
| Conread position: | 183-458 | 
| Cow position: | chr6:2582647-2582921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 38, 29 | 
| Conread position: | 183-479 | 
| Cow position: | chr6:68049208-68049501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 92, 80 | 
| Conread position: | 183-502 | 
| Cow position: | chr6:4383265-4383573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 291, 92 | 
| Conread position: | 183-502 | 
| Cow position: | chr6:16746112-16746437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 34, 80 | 
| Conread position: | 183-504 | 
| Cow position: | chr6:44194773-44194453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 38, 100 | 
| Conread position: | 183-504 | 
| Cow position: | chr6:60350527-60350196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 38, 157 | 
| Conread position: | 184-379 | 
| Cow position: | chr6:20379692-20379497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 34, 91 | 
| Conread position: | 184-453 | 
| Cow position: | chr6:30826261-30825989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 93, 36 | 
| Conread position: | 184-461 | 
| Cow position: | chr6:52025878-52025600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 121, 27 | 
| Conread position: | 184-461 | 
| Cow position: | chr6:67304575-67304855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 65, 155 | 
| Conread position: | 184-493 | 
| Cow position: | chr6:14850936-14850630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 121, 14 | 
| Conread position: | 184-493 | 
| Cow position: | chr6:66874135-66874435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 37, 62 | 
| Conread position: | 184-497 | 
| Cow position: | chr6:15301044-15300744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 35, 96 | 
| Conread position: | 184-502 | 
| Cow position: | chr6:37148972-37149283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 95, 15 | 
| Conread position: | 184-502 | 
| Cow position: | chr6:38440955-38441266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 32, 73 | 
| Conread position: | 184-504 | 
| Cow position: | chr6:31564560-31564242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 45, 31 | 
| Conread position: | 184-504 | 
| Cow position: | chr6:45065233-45064921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 33, 67 | 
| Conread position: | 184-504 | 
| Cow position: | chr6:53460798-53460471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 121, 89 | 
| Conread position: | 186-380 | 
| Cow position: | chr6:59015787-59015586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 35, 71 | 
| Conread position: | 186-392 | 
| Cow position: | chr6:20605709-20605920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 69, 152 | 
| Conread position: | 186-412 | 
| Cow position: | chr6:19401637-19401860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 30, 78 | 
| Conread position: | 186-475 | 
| Cow position: | chr6:60239613-60239331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 69, 27 | 
| Conread position: | 186-493 | 
| Cow position: | chr6:46865824-46865508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 32, 95 | 
| Conread position: | 187-360 | 
| Cow position: | chr6:51398577-51398754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 34, 88 | 
| Conread position: | 187-504 | 
| Cow position: | chr6:6063503-6063198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 35, 77 | 
| Conread position: | 188-489 | 
| Cow position: | chr6:14949704-14949402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 33, 87 | 
| Conread position: | 188-504 | 
| Cow position: | chr6:23248186-23247870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 33, 87 | 
| Conread position: | 189-460 | 
| Cow position: | chr6:21737106-21736836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 16, 89 | 
| Conread position: | 190-504 | 
| Cow position: | chr6:7190340-7190023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 31, 84 | 
| Conread position: | 192-410 | 
| Cow position: | chr6:242595-242812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 30, 72 | 
| Conread position: | 192-412 | 
| Cow position: | chr6:54864885-54864666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 110, 80 | 
| Conread position: | 192-504 | 
| Cow position: | chr6:16423480-16423798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 24, 10 | 
| Conread position: | 193-391 | 
| Cow position: | chr6:7694571-7694365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 101, 62 | 
| Conread position: | 193-410 | 
| Cow position: | chr6:1907321-1907543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 26, 81 | 
| Conread position: | 193-463 | 
| Cow position: | chr6:5462266-5462006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 102, 53 | 
| Conread position: | 193-492 | 
| Cow position: | chr6:35415739-35415432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 112, 50 | 
| Conread position: | 193-504 | 
| Cow position: | chr6:38614606-38614908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 28, 71 | 
| Conread position: | 193-504 | 
| Cow position: | chr6:54430601-54430926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 23, 220 | 
| Conread position: | 194-396 | 
| Cow position: | chr6:21110752-21110953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 27, 84 | 
| Conread position: | 194-411 | 
| Cow position: | chr6:6460325-6460547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 68, 27 | 
| Conread position: | 194-460 | 
| Cow position: | chr6:25773598-25773336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 24, 70 | 
| Conread position: | 194-486 | 
| Cow position: | chr6:29239726-29240018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 19, 57 | 
| Conread position: | 194-504 | 
| Cow position: | chr6:38207712-38207394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 98, 146 | 
| Conread position: | 194-504 | 
| Cow position: | chr6:60442202-60442505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 111, 80 | 
| Conread position: | 196-504 | 
| Cow position: | chr6:17997530-17997224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 23, 61 | 
| Conread position: | 197-412 | 
| Cow position: | chr6:59620455-59620673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 19, 77 | 
| Conread position: | 198-422 | 
| Cow position: | chr6:59302038-59301806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 198-471 | 
| Cow position: | chr6:62324777-62325055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 25, 60 | 
| Conread position: | 198-477 | 
| Cow position: | chr6:3545484-3545763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 65, 41 | 
| Conread position: | 199-455 | 
| Cow position: | chr6:24515405-24515154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 22, 72 | 
| Conread position: | 199-501 | 
| Cow position: | chr6:57405336-57405032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 19, 37 | 
| Conread position: | 199-504 | 
| Cow position: | chr6:59069840-59069528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 18, 141 | 
| Conread position: | 200-411 | 
| Cow position: | chr6:46400616-46400408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 29, 80 | 
| Conread position: | 200-417 | 
| Cow position: | chr6:53139140-53138912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 17, 64 | 
| Conread position: | 201-504 | 
| Cow position: | chr6:67456493-67456814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 21, 236 | 
| Conread position: | 203-502 | 
| Cow position: | chr6:21231329-21231618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 18, 5 | 
| Conread position: | 204-448 | 
| Cow position: | chr6:61137158-61137412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 28, 59 | 
| Conread position: | 204-497 | 
| Cow position: | chr6:19695600-19695895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 110, 70 | 
| Conread position: | 205-480 | 
| Cow position: | chr6:38641292-38641568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 16, 70 | 
| Conread position: | 206-504 | 
| Cow position: | chr6:20157120-20157429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 49, 218 | 
| Conread position: | 207-461 | 
| Cow position: | chr6:415891-416156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 208-504 | 
| Cow position: | chr6:66131105-66131402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 13, 42 | 
| Conread position: | 209-493 | 
| Cow position: | chr6:16191466-16191762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 86, 20 | 
| Conread position: | 211-504 | 
| Cow position: | chr6:28318210-28318493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 66, 45 | 
| Conread position: | 213-504 | 
| Cow position: | chr6:22503120-22502815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 64, 50 | 
| Conread position: | 214-405 | 
| Cow position: | chr6:33276843-33277040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 70, 100 | 
| Conread position: | 214-497 | 
| Cow position: | chr6:58732510-58732222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 41, 96 | 
| Conread position: | 214-503 | 
| Cow position: | chr6:12092180-12091898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 240, 60 | 
| Conread position: | 215-461 | 
| Cow position: | chr6:53731326-53731574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 90, 59 | 
| Conread position: | 215-479 | 
| Cow position: | chr6:10400090-10399836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 54, 48 | 
| Conread position: | 215-483 | 
| Cow position: | chr6:37199740-37199453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 215-501 | 
| Cow position: | chr6:63299218-63298938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 64, 16 | 
| Conread position: | 215-504 | 
| Cow position: | chr6:6400753-6401047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 36, 131 | 
| Conread position: | 215-504 | 
| Cow position: | chr6:52412659-52412955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 40, 209 | 
| Conread position: | 217-504 | 
| Cow position: | chr6:53519816-53519528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 88, 57 | 
| Conread position: | 220-502 | 
| Cow position: | chr6:8788227-8787943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 35, 89 | 
| Conread position: | 225-461 | 
| Cow position: | chr6:54287884-54288121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 37, 197 | 
| Conread position: | 226-504 | 
| Cow position: | chr6:25008530-25008815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 79, 48 | 
| Conread position: | 231-503 | 
| Cow position: | chr6:52901062-52901333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 200, 32 | 
| Conread position: | 235-493 | 
| Cow position: | chr6:59104433-59104683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 217, 39 | 
| Conread position: | 238-489 | 
| Cow position: | chr6:19012888-19013151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 53, 22 | 
| Conread position: | 243-504 | 
| Cow position: | chr6:11246586-11246860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 19, 106 | 
| Conread position: | 247-463 | 
| Cow position: | chr6:32335633-32335853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 44, 150 | 
| Conread position: | 251-491 | 
| Cow position: | chr6:59108774-59109027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 38, 9 | 
| Conread position: | 252-502 | 
| Cow position: | chr6:12543102-12542836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 10, 94 | 
| Conread position: | 259-504 | 
| Cow position: | chr6:17313581-17313831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 25, 78 | 
| Conread position: | 260-466 | 
| Cow position: | chr6:16764802-16764602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 31, 75 | 
| Conread position: | 260-504 | 
| Cow position: | chr6:21062043-21061790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 45, 231 | 
| Conread position: | 260-504 | 
| Cow position: | chr6:50984076-50984318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 24, 125 | 
| Conread position: | 261-503 | 
| Cow position: | chr6:60117996-60118245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 34, 145 | 
| Conread position: | 261-504 | 
| Cow position: | chr6:14914398-14914140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 28, 166 | 
| Conread position: | 266-504 | 
| Cow position: | chr6:19292658-19292897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 30, 42 | 
| Conread position: | 269-504 | 
| Cow position: | chr6:23402131-23401897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 35, 67 | 
| Conread position: | 278-464 | 
| Cow position: | chr6:29266072-29266257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 29, 145 | 
| Conread position: | 278-494 | 
| Cow position: | chr6:60819382-60819598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 25, 141 | 
| Conread position: | 278-504 | 
| Cow position: | chr6:55763721-55763949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 27, 141 | 
| Conread position: | 278-504 | 
| Cow position: | chr6:60739882-60740110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 27, 141 | 
| Conread position: | 278-504 | 
| Cow position: | chr6:67323183-67323405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 27, 92 | 
| Conread position: | 281-462 | 
| Cow position: | chr6:19351284-19351105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 24, 55 | 
| Conread position: | 283-501 | 
| Cow position: | chr6:65264662-65264453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 23, 10 | 
| Conread position: | 283-504 | 
| Cow position: | chr6:4559431-4559209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 21, 123 | 
| Conread position: | 283-504 | 
| Cow position: | chr6:19996493-19996710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 24, 86 | 
| Conread position: | 284-472 | 
| Cow position: | chr6:18968906-18968720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 21, 46 | 
| Conread position: | 284-481 | 
| Cow position: | chr6:57298889-57299086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 21, 126 | 
| Conread position: | 284-504 | 
| Cow position: | chr6:377006-377221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 190, 97 | 
| Conread position: | 285-472 | 
| Cow position: | chr6:40834595-40834407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 21, 57 | 
| Conread position: | 285-480 | 
| Cow position: | chr6:9219147-9219343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 20, 61 | 
| Conread position: | 285-495 | 
| Cow position: | chr6:44984200-44984419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 10, 137 | 
| Conread position: | 285-504 | 
| Cow position: | chr6:1371353-1371130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 22, 126 | 
| Conread position: | 285-504 | 
| Cow position: | chr6:15447330-15447102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 20, 57 | 
| Conread position: | 285-504 | 
| Cow position: | chr6:60667295-60667509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 22, 129 | 
| Conread position: | 288-461 | 
| Cow position: | chr6:33150529-33150358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 17, 55 | 
| Conread position: | 288-502 | 
| Cow position: | chr6:36189574-36189791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 17, 121 | 
| Conread position: | 288-504 | 
| Cow position: | chr6:21234921-21235139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 17, 48 | 
| Conread position: | 289-413 | 
| Cow position: | chr6:32987116-32986993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 289-456 | 
| Cow position: | chr6:358010-357841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 17, 129 | 
| Conread position: | 289-504 | 
| Cow position: | chr6:35993459-35993680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 16, 100 | 
| Conread position: | 299-504 | 
| Cow position: | chr6:9719032-9718818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 37, 147 | 
| Conread position: | 306-493 | 
| Cow position: | chr6:4692081-4691891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 103, 0 | 
| Conread position: | 306-495 | 
| Cow position: | chr6:58370652-58370844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 308-503 | 
| Cow position: | chr6:17549080-17548879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 104, 24 | 
| Conread position: | 319-477 | 
| Cow position: | chr6:6673014-6673170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 18, 97 | 
| Conread position: | 324-504 | 
| Cow position: | chr6:37395491-37395305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 87, 17 | 
| Conread position: | 332-485 | 
| Cow position: | chr6:54365079-54364924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 95, 0 | 
| Conread position: | 341-501 | 
| Cow position: | chr6:26765081-26764925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 153, 62 | 
Show alignments to all cow chromosomes.
