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Cow genome map

           
Conread name:
           
Ss1.1-rret24_n12.5
        

               
Conread position:
               
432-609
               

               
Cow position:
               
chr13:55947934-55947761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
437-738
               

               
Cow position:
               
chr13:11591907-11591610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
7, 110
               

               
Conread position:
               
461-822
               

               
Cow position:
               
chr13:6540177-6540527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 27
               

               
Conread position:
               
464-754
               

               
Cow position:
               
chr13:13297802-13297519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
471-822
               

               
Cow position:
               
chr13:620138-620473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 69
               

               
Conread position:
               
472-739
               

               
Cow position:
               
chr13:46736330-46736074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
473-738
               

               
Cow position:
               
chr13:46181912-46181651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
240, 83
               

               
Conread position:
               
480-630
               

               
Cow position:
               
chr13:13809447-13809596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 74
               

               
Conread position:
               
480-702
               

               
Cow position:
               
chr13:60389380-60389593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
480-805
               

               
Cow position:
               
chr13:11202139-11201829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
247, 60
               

               
Conread position:
               
481-812
               

               
Cow position:
               
chr13:59170762-59170428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
481-813
               

               
Cow position:
               
chr13:13554210-13554550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
104, 76
               

               
Conread position:
               
482-737
               

               
Cow position:
               
chr13:17110332-17110086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
482-740
               

               
Cow position:
               
chr13:47022469-47022221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
254, 16
               

               
Conread position:
               
482-810
               

               
Cow position:
               
chr13:7312587-7312934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
482-811
               

               
Cow position:
               
chr13:17498329-17498006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
482-812
               

               
Cow position:
               
chr13:15621926-15621593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 79
               

               
Conread position:
               
482-820
               

               
Cow position:
               
chr13:25978078-25978420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 78
               

               
Conread position:
               
483-704
               

               
Cow position:
               
chr13:17971996-17971782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
484-750
               

               
Cow position:
               
chr13:23856321-23856055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
484-810
               

               
Cow position:
               
chr13:39826662-39826341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
243, 72
               

               
Conread position:
               
484-811
               

               
Cow position:
               
chr13:19240545-19240224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 70
               

               
Conread position:
               
484-812
               

               
Cow position:
               
chr13:1569032-1568718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
484-865
               

               
Cow position:
               
chr13:15659386-15659004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
485-738
               

               
Cow position:
               
chr13:20563104-20562853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
485-829
               

               
Cow position:
               
chr13:23512475-23512148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
491-749
               

               
Cow position:
               
chr13:62518228-62518475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
492-808
               

               
Cow position:
               
chr13:20868653-20868957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
33, 60
               

               
Conread position:
               
492-813
               

               
Cow position:
               
chr13:19581985-19582298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
288, 64
               

               
Conread position:
               
492-827
               

               
Cow position:
               
chr13:6189514-6189832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 49
               

               
Conread position:
               
493-716
               

               
Cow position:
               
chr13:15528931-15529156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
493-811
               

               
Cow position:
               
chr13:10924812-10925138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 63
               

               
Conread position:
               
493-811
               

               
Cow position:
               
chr13:21269481-21269796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 61
               

               
Conread position:
               
493-812
               

               
Cow position:
               
chr13:20288431-20288122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 58
               

               
Conread position:
               
493-818
               

               
Cow position:
               
chr13:54702288-54701959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
493-829
               

               
Cow position:
               
chr13:47007629-47007944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
495-654
               

               
Cow position:
               
chr13:37521281-37521433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
495-716
               

               
Cow position:
               
chr13:6060911-6061127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
495-717
               

               
Cow position:
               
chr13:15903115-15902904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
495-719
               

               
Cow position:
               
chr13:18835291-18835082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
113, 53
               

               
Conread position:
               
495-723
               

               
Cow position:
               
chr13:17966110-17966335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
495-725
               

               
Cow position:
               
chr13:21176223-21176447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
495-725
               

               
Cow position:
               
chr13:48037720-48037495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
495-730
               

               
Cow position:
               
chr13:9593607-9593372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
495-737
               

               
Cow position:
               
chr13:15166918-15166678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
74, 112
               

               
Conread position:
               
495-738
               

               
Cow position:
               
chr13:37484175-37484421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
91, 48
               

               
Conread position:
               
495-740
               

               
Cow position:
               
chr13:8609453-8609691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
149, 8
               

               
Conread position:
               
495-740
               

               
Cow position:
               
chr13:20684022-20684271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
495-740
               

               
Cow position:
               
chr13:56155060-56155293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
495-742
               

               
Cow position:
               
chr13:11381623-11381870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
495-743
               

               
Cow position:
               
chr13:8355296-8355057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
495-743
               

               
Cow position:
               
chr13:17439671-17439915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
495-743
               

               
Cow position:
               
chr13:17800171-17799930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 22
               

               
Conread position:
               
495-743
               

               
Cow position:
               
chr13:55316090-55316342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
495-744
               

               
Cow position:
               
chr13:53566694-53566455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 51
               

               
Conread position:
               
495-749
               

               
Cow position:
               
chr13:13176750-13176492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
495-749
               

               
Cow position:
               
chr13:43184773-43185030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 61
               

               
Conread position:
               
495-750
               

               
Cow position:
               
chr13:18172437-18172182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
495-750
               

               
Cow position:
               
chr13:19320634-19320374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
135, 95
               

               
Conread position:
               
495-755
               

               
Cow position:
               
chr13:11460720-11460475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
236, 22
               

               
Conread position:
               
495-777
               

               
Cow position:
               
chr13:20666288-20666567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
495-777
               

               
Cow position:
               
chr13:23479126-23478847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
495-790
               

               
Cow position:
               
chr13:34263270-34263567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
495-797
               

               
Cow position:
               
chr13:48165326-48165624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
495-803
               

               
Cow position:
               
chr13:971794-972104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
495-803
               

               
Cow position:
               
chr13:47186323-47186023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
165, 58
               

               
Conread position:
               
495-805
               

               
Cow position:
               
chr13:24586140-24585839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
495-805
               

               
Cow position:
               
chr13:46329505-46329812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
495-806
               

               
Cow position:
               
chr13:27525166-27525469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 53
               

               
Conread position:
               
495-809
               

               
Cow position:
               
chr13:35659852-35659541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 58
               

               
Conread position:
               
495-809
               

               
Cow position:
               
chr13:61976866-61977171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 58
               

               
Conread position:
               
495-810
               

               
Cow position:
               
chr13:2774226-2773901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 64
               

               
Conread position:
               
495-810
               

               
Cow position:
               
chr13:22085645-22085946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
495-811
               

               
Cow position:
               
chr13:19882937-19883249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
495-811
               

               
Cow position:
               
chr13:21135801-21136127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
495-811
               

               
Cow position:
               
chr13:43480156-43479847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 48
               

               
Conread position:
               
495-812
               

               
Cow position:
               
chr13:12670349-12670668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 22
               

               
Conread position:
               
495-812
               

               
Cow position:
               
chr13:20880827-20881137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
495-812
               

               
Cow position:
               
chr13:35526111-35526410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
234, 43
               

               
Conread position:
               
495-812
               

               
Cow position:
               
chr13:41806874-41806560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
495-812
               

               
Cow position:
               
chr13:60375389-60375704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
495-813
               

               
Cow position:
               
chr13:20820737-20821054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 63
               

               
Conread position:
               
495-813
               

               
Cow position:
               
chr13:23960714-23961024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 53
               

               
Conread position:
               
495-816
               

               
Cow position:
               
chr13:17821169-17821479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
495-816
               

               
Cow position:
               
chr13:53574069-53573759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
495-818
               

               
Cow position:
               
chr13:12989943-12989640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
495-818
               

               
Cow position:
               
chr13:24369679-24369364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
495-818
               

               
Cow position:
               
chr13:58763533-58763833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
316, 31
               

               
Conread position:
               
495-820
               

               
Cow position:
               
chr13:21235588-21235892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 18
               

               
Conread position:
               
495-821
               

               
Cow position:
               
chr13:5671492-5671811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
495-821
               

               
Cow position:
               
chr13:12974901-12974593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
280, 12
               

               
Conread position:
               
495-821
               

               
Cow position:
               
chr13:13261103-13260766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
495-822
               

               
Cow position:
               
chr13:152053-151742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 47
               

               
Conread position:
               
495-822
               

               
Cow position:
               
chr13:17021630-17021951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
495-822
               

               
Cow position:
               
chr13:20155099-20154768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
495-822
               

               
Cow position:
               
chr13:49022775-49023093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
495-823
               

               
Cow position:
               
chr13:55674110-55674435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 58
               

               
Conread position:
               
495-825
               

               
Cow position:
               
chr13:18058147-18058478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
495-825
               

               
Cow position:
               
chr13:44322999-44322662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
495-827
               

               
Cow position:
               
chr13:5758242-5758563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 61
               

               
Conread position:
               
495-827
               

               
Cow position:
               
chr13:15288830-15289149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
495-827
               

               
Cow position:
               
chr13:21170629-21170300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 35
               

               
Conread position:
               
495-830
               

               
Cow position:
               
chr13:47964098-47964411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 17
               

               
Conread position:
               
495-832
               

               
Cow position:
               
chr13:49503432-49503773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 58
               

               
Conread position:
               
495-837
               

               
Cow position:
               
chr13:15194633-15194963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
495-863
               

               
Cow position:
               
chr13:54582976-54582610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
495-900
               

               
Cow position:
               
chr13:17745338-17744948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 32
               

               
Conread position:
               
496-811
               

               
Cow position:
               
chr13:7059566-7059243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
496-812
               

               
Cow position:
               
chr13:56686530-56686227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
496-822
               

               
Cow position:
               
chr13:15869220-15868883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
497-811
               

               
Cow position:
               
chr13:10221042-10220742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
497-812
               

               
Cow position:
               
chr13:17437772-17438078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
192, 22
               

               
Conread position:
               
497-821
               

               
Cow position:
               
chr13:37818653-37818971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
498-639
               

               
Cow position:
               
chr13:16711722-16711587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
498-643
               

               
Cow position:
               
chr13:30026208-30026063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
498-663
               

               
Cow position:
               
chr13:16024686-16024522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
498-678
               

               
Cow position:
               
chr13:46324692-46324870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
498-683
               

               
Cow position:
               
chr13:61166363-61166536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
498-686
               

               
Cow position:
               
chr13:12619018-12619205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 61
               

               
Conread position:
               
498-688
               

               
Cow position:
               
chr13:17613439-17613249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 56
               

               
Conread position:
               
498-697
               

               
Cow position:
               
chr13:50713296-50713110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
498-698
               

               
Cow position:
               
chr13:18243957-18243761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
498-699
               

               
Cow position:
               
chr13:25531692-25531892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
498-709
               

               
Cow position:
               
chr13:34555736-34555940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 44
               

               
Conread position:
               
498-719
               

               
Cow position:
               
chr13:56678110-56677893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
498-723
               

               
Cow position:
               
chr13:38278039-38278273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
498-725
               

               
Cow position:
               
chr13:39368049-39367831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
149, 21
               

               
Conread position:
               
498-727
               

               
Cow position:
               
chr13:15884924-15885150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
498-727
               

               
Cow position:
               
chr13:20649888-20650112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
498-736
               

               
Cow position:
               
chr13:45725991-45725744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
498-737
               

               
Cow position:
               
chr13:547579-547356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
498-737
               

               
Cow position:
               
chr13:26369621-26369383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
82, 61
               

               
Conread position:
               
498-740
               

               
Cow position:
               
chr13:56148632-56148379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 86
               

               
Conread position:
               
498-740
               

               
Cow position:
               
chr13:56160335-56160588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
35, 86
               

               
Conread position:
               
498-740
               

               
Cow position:
               
chr13:60429979-60430221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
498-742
               

               
Cow position:
               
chr13:11096269-11096038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
111, 22
               

               
Conread position:
               
498-743
               

               
Cow position:
               
chr13:2414124-2413882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
498-743
               

               
Cow position:
               
chr13:36771324-36771564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
498-743
               

               
Cow position:
               
chr13:37381900-37381654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
498-743
               

               
Cow position:
               
chr13:37640679-37640445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
498-743
               

               
Cow position:
               
chr13:51115932-51116170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
498-747
               

               
Cow position:
               
chr13:2404835-2404604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
226, 58
               

               
Conread position:
               
498-752
               

               
Cow position:
               
chr13:7663328-7663578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
498-755
               

               
Cow position:
               
chr13:1042870-1043121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
498-771
               

               
Cow position:
               
chr13:25547490-25547761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
226, 58
               

               
Conread position:
               
498-772
               

               
Cow position:
               
chr13:15110415-15110142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
498-791
               

               
Cow position:
               
chr13:44626464-44626170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
79, 42
               

               
Conread position:
               
498-795
               

               
Cow position:
               
chr13:24155639-24155311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 57
               

               
Conread position:
               
498-803
               

               
Cow position:
               
chr13:17338531-17338218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
498-804
               

               
Cow position:
               
chr13:60974178-60973855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 57
               

               
Conread position:
               
498-805
               

               
Cow position:
               
chr13:48598005-48597700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
498-806
               

               
Cow position:
               
chr13:13954295-13954606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
498-806
               

               
Cow position:
               
chr13:60966857-60966569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
498-808
               

               
Cow position:
               
chr13:8374676-8374973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
498-808
               

               
Cow position:
               
chr13:15446138-15445837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
112, 58
               

               
Conread position:
               
498-809
               

               
Cow position:
               
chr13:21127248-21127554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
498-810
               

               
Cow position:
               
chr13:17855468-17855153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
498-810
               

               
Cow position:
               
chr13:29831341-29831641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 58
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr13:607172-607478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
223, 56
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr13:6849023-6848709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr13:9800601-9800306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr13:9900244-9899931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 61
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr13:12875877-12876191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr13:14576302-14576000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr13:18166829-18166517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr13:20580001-20579703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr13:21275950-21275641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 22
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr13:28552689-28552371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr13:39232739-39233042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
223, 58
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr13:42114114-42113800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr13:42860476-42860782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
231, 62
               

               
Conread position:
               
498-812
               

               
Cow position:
               
chr13:3315582-3315902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
498-812
               

               
Cow position:
               
chr13:4552897-4552610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
498-812
               

               
Cow position:
               
chr13:6974256-6973946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 62
               

               
Conread position:
               
498-812
               

               
Cow position:
               
chr13:11061081-11060758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
183, 57
               

               
Conread position:
               
498-812
               

               
Cow position:
               
chr13:18852176-18851872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
498-812
               

               
Cow position:
               
chr13:19022371-19022048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
498-812
               

               
Cow position:
               
chr13:24753976-24753677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
498-812
               

               
Cow position:
               
chr13:48251890-48252184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
179, 56
               

               
Conread position:
               
498-813
               

               
Cow position:
               
chr13:14544214-14543918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 57
               

               
Conread position:
               
498-816
               

               
Cow position:
               
chr13:30651273-30650965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
222, 61
               

               
Conread position:
               
498-816
               

               
Cow position:
               
chr13:33875762-33875452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
225, 62
               

               
Conread position:
               
498-816
               

               
Cow position:
               
chr13:61188626-61188308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
498-817
               

               
Cow position:
               
chr13:18491697-18491386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
498-819
               

               
Cow position:
               
chr13:12245143-12245451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
223, 57
               

               
Conread position:
               
498-820
               

               
Cow position:
               
chr13:60509025-60509348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
498-821
               

               
Cow position:
               
chr13:6663651-6663981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
498-821
               

               
Cow position:
               
chr13:9142386-9142052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 182
               

               
Conread position:
               
498-821
               

               
Cow position:
               
chr13:9974980-9975293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 61
               

               
Conread position:
               
498-821
               

               
Cow position:
               
chr13:16247753-16247420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
498-821
               

               
Cow position:
               
chr13:37592847-37593171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
498-821
               

               
Cow position:
               
chr13:54388923-54389243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
498-822
               

               
Cow position:
               
chr13:1363787-1363455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
498-822
               

               
Cow position:
               
chr13:8362660-8362972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
80, 38
               

               
Conread position:
               
498-822
               

               
Cow position:
               
chr13:11321520-11321826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
122, 62
               

               
Conread position:
               
498-822
               

               
Cow position:
               
chr13:15041378-15041702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 61
               

               
Conread position:
               
498-822
               

               
Cow position:
               
chr13:17970932-17971266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
498-822
               

               
Cow position:
               
chr13:20088608-20088945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 215
               

               
Conread position:
               
498-822
               

               
Cow position:
               
chr13:54128497-54128823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
498-823
               

               
Cow position:
               
chr13:15192794-15193115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 61
               

               
Conread position:
               
498-825
               

               
Cow position:
               
chr13:22115802-22115446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
498-825
               

               
Cow position:
               
chr13:45023116-45023449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
498-826
               

               
Cow position:
               
chr13:13501526-13501841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
498-826
               

               
Cow position:
               
chr13:19023751-19024086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
498-827
               

               
Cow position:
               
chr13:5910804-5911124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
498-827
               

               
Cow position:
               
chr13:19223741-19223419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
498-827
               

               
Cow position:
               
chr13:25579093-25579426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
498-827
               

               
Cow position:
               
chr13:46112064-46111736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
498-831
               

               
Cow position:
               
chr13:2822957-2822628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
223, 28
               

               
Conread position:
               
498-834
               

               
Cow position:
               
chr13:1231742-1231403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
85, 61
               

               
Conread position:
               
498-855
               

               
Cow position:
               
chr13:25604534-25604872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
317, 66
               

               
Conread position:
               
498-857
               

               
Cow position:
               
chr13:37985663-37986004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
231, 57
               

               
Conread position:
               
498-861
               

               
Cow position:
               
chr13:17569004-17569358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
498-868
               

               
Cow position:
               
chr13:52749383-52749736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
318, 32
               

               
Conread position:
               
499-632
               

               
Cow position:
               
chr13:47313014-47312882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
499-680
               

               
Cow position:
               
chr13:60329848-60329676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
499-717
               

               
Cow position:
               
chr13:890077-890293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
499-725
               

               
Cow position:
               
chr13:23270117-23270333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
499-725
               

               
Cow position:
               
chr13:31813966-31813747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
499-741
               

               
Cow position:
               
chr13:50568322-50568549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
499-746
               

               
Cow position:
               
chr13:20706111-20706355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
499-749
               

               
Cow position:
               
chr13:3989298-3989051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
499-805
               

               
Cow position:
               
chr13:37803974-37803670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 44
               

               
Conread position:
               
499-809
               

               
Cow position:
               
chr13:38329721-38329405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
499-812
               

               
Cow position:
               
chr13:23667351-23667041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
499-812
               

               
Cow position:
               
chr13:34281771-34281465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
499-820
               

               
Cow position:
               
chr13:14063427-14063745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 18
               

               
Conread position:
               
499-852
               

               
Cow position:
               
chr13:17114283-17114637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
500-688
               

               
Cow position:
               
chr13:11955015-11955208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
500-728
               

               
Cow position:
               
chr13:10928899-10929119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
500-734
               

               
Cow position:
               
chr13:8555552-8555329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
500-743
               

               
Cow position:
               
chr13:51821796-51822019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
500-822
               

               
Cow position:
               
chr13:18197509-18197830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
500-822
               

               
Cow position:
               
chr13:25381054-25380718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 56
               

               
Conread position:
               
500-822
               

               
Cow position:
               
chr13:32017432-32017745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 56
               

               
Conread position:
               
501-626
               

               
Cow position:
               
chr13:54093837-54093716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
501-660
               

               
Cow position:
               
chr13:10098898-10099051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
501-663
               

               
Cow position:
               
chr13:20128758-20128600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
501-666
               

               
Cow position:
               
chr13:21155400-21155569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
501-693
               

               
Cow position:
               
chr13:52929800-52929615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
501-705
               

               
Cow position:
               
chr13:8201392-8201591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
501-713
               

               
Cow position:
               
chr13:6153690-6153900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
501-716
               

               
Cow position:
               
chr13:8652346-8652561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
501-723
               

               
Cow position:
               
chr13:8402151-8401930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
501-724
               

               
Cow position:
               
chr13:49457766-49457557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
501-725
               

               
Cow position:
               
chr13:12614348-12614125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 59
               

               
Conread position:
               
501-725
               

               
Cow position:
               
chr13:14771548-14771324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
501-725
               

               
Cow position:
               
chr13:43762262-43762041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
501-725
               

               
Cow position:
               
chr13:53330364-53330144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
194, 58
               

               
Conread position:
               
501-726
               

               
Cow position:
               
chr13:9643795-9644021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
92, 37
               

               
Conread position:
               
501-727
               

               
Cow position:
               
chr13:28683455-28683232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
501-728
               

               
Cow position:
               
chr13:21668779-21668568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
501-732
               

               
Cow position:
               
chr13:52284899-52284681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
501-732
               

               
Cow position:
               
chr13:54344864-54344647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
501-741
               

               
Cow position:
               
chr13:61990244-61990465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
501-742
               

               
Cow position:
               
chr13:5082745-5082505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
227, 58
               

               
Conread position:
               
501-742
               

               
Cow position:
               
chr13:12546818-12547054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
226, 55
               

               
Conread position:
               
501-742
               

               
Cow position:
               
chr13:55727993-55727756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
228, 52
               

               
Conread position:
               
501-743
               

               
Cow position:
               
chr13:4420437-4420183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
501-743
               

               
Cow position:
               
chr13:6389473-6389249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
217, 54
               

               
Conread position:
               
501-752
               

               
Cow position:
               
chr13:5713393-5713161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
501-770
               

               
Cow position:
               
chr13:6086809-6087067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
501-789
               

               
Cow position:
               
chr13:20570819-20570535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
221, 44
               

               
Conread position:
               
501-790
               

               
Cow position:
               
chr13:52228010-52228292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
114, 55
               

               
Conread position:
               
501-797
               

               
Cow position:
               
chr13:18929620-18929324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
501-797
               

               
Cow position:
               
chr13:50750961-50751253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
114, 58
               

               
Conread position:
               
501-800
               

               
Cow position:
               
chr13:6442013-6442311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
501-800
               

               
Cow position:
               
chr13:15974705-15974414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
501-803
               

               
Cow position:
               
chr13:16343779-16343503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
501-805
               

               
Cow position:
               
chr13:5060837-5060529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
154, 55
               

               
Conread position:
               
501-805
               

               
Cow position:
               
chr13:24230302-24230001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 55
               

               
Conread position:
               
501-808
               

               
Cow position:
               
chr13:34728749-34729053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
501-810
               

               
Cow position:
               
chr13:19033647-19033341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
19, 58
               

               
Conread position:
               
501-810
               

               
Cow position:
               
chr13:26261706-26262006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 58
               

               
Conread position:
               
501-811
               

               
Cow position:
               
chr13:2192803-2192522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
143, 53
               

               
Conread position:
               
501-811
               

               
Cow position:
               
chr13:6931005-6930708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
501-811
               

               
Cow position:
               
chr13:9587496-9587797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 87
               

               
Conread position:
               
501-811
               

               
Cow position:
               
chr13:12448900-12449196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
501-811
               

               
Cow position:
               
chr13:14967125-14967430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
501-811
               

               
Cow position:
               
chr13:15162566-15162851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
232, 17
               

               
Conread position:
               
501-811
               

               
Cow position:
               
chr13:45593995-45593708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
501-811
               

               
Cow position:
               
chr13:51940829-51940531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
501-812
               

               
Cow position:
               
chr13:12282927-12282621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
54, 197
               

               
Conread position:
               
501-812
               

               
Cow position:
               
chr13:16714169-16714482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 121
               

               
Conread position:
               
501-812
               

               
Cow position:
               
chr13:20839656-20839364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
501-812
               

               
Cow position:
               
chr13:46516153-46515843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
501-813
               

               
Cow position:
               
chr13:49805063-49804769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
305, 53
               

               
Conread position:
               
501-814
               

               
Cow position:
               
chr13:25435027-25435324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
74, 55
               

               
Conread position:
               
501-816
               

               
Cow position:
               
chr13:20497745-20497422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
501-816
               

               
Cow position:
               
chr13:21280394-21280722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
501-816
               

               
Cow position:
               
chr13:25695678-25695988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
501-818
               

               
Cow position:
               
chr13:16014902-16014581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
501-818
               

               
Cow position:
               
chr13:16038200-16038508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 55
               

               
Conread position:
               
501-818
               

               
Cow position:
               
chr13:24693044-24692736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 58
               

               
Conread position:
               
501-819
               

               
Cow position:
               
chr13:17977433-17977119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
225, 56
               

               
Conread position:
               
501-820
               

               
Cow position:
               
chr13:10988983-10989299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 53
               

               
Conread position:
               
501-820
               

               
Cow position:
               
chr13:57002820-57002500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
501-821
               

               
Cow position:
               
chr13:4664773-4665075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
501-821
               

               
Cow position:
               
chr13:7076350-7076015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
38, 29
               

               
Conread position:
               
501-821
               

               
Cow position:
               
chr13:14016477-14016784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
501-821
               

               
Cow position:
               
chr13:18995220-18994902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
501-821
               

               
Cow position:
               
chr13:57475324-57475644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
187, 86
               

               
Conread position:
               
501-822
               

               
Cow position:
               
chr13:26698404-26698721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
501-822
               

               
Cow position:
               
chr13:47322312-47322618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
501-822
               

               
Cow position:
               
chr13:52894234-52893922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 41
               

               
Conread position:
               
501-823
               

               
Cow position:
               
chr13:9906826-9906500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
501-825
               

               
Cow position:
               
chr13:20357801-20358114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
143, 53
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr13:3160484-3160169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
148, 19
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr13:5279094-5279435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
55, 317
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr13:6079326-6079636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 58
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr13:11821246-11820928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr13:12770098-12770425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr13:16203762-16203430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
220, 45
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr13:18999631-18999297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr13:56034766-56035090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
501-828
               

               
Cow position:
               
chr13:19188393-19188081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
501-829
               

               
Cow position:
               
chr13:20893545-20893876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
501-829
               

               
Cow position:
               
chr13:29907891-29908215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 52
               

               
Conread position:
               
501-829
               

               
Cow position:
               
chr13:51015094-51015421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
217, 71
               

               
Conread position:
               
501-830
               

               
Cow position:
               
chr13:30798815-30798479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
501-831
               

               
Cow position:
               
chr13:32283217-32282891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
501-856
               

               
Cow position:
               
chr13:26743218-26742862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
160, 45
               

               
Conread position:
               
502-698
               

               
Cow position:
               
chr13:16187806-16187997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
502-719
               

               
Cow position:
               
chr13:12202458-12202240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
502-725
               

               
Cow position:
               
chr13:40722616-40722835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 49
               

               
Conread position:
               
502-738
               

               
Cow position:
               
chr13:52585930-52586178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
502-743
               

               
Cow position:
               
chr13:23167005-23167248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
502-797
               

               
Cow position:
               
chr13:49476177-49475870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 50
               

               
Conread position:
               
502-798
               

               
Cow position:
               
chr13:12207135-12206859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
502-811
               

               
Cow position:
               
chr13:311522-311217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 54
               

               
Conread position:
               
502-812
               

               
Cow position:
               
chr13:17292041-17292344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
502-816
               

               
Cow position:
               
chr13:36877164-36876845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 218
               

               
Conread position:
               
502-821
               

               
Cow position:
               
chr13:55583285-55582967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
81, 52
               

               
Conread position:
               
502-822
               

               
Cow position:
               
chr13:5263198-5263504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
502-827
               

               
Cow position:
               
chr13:13338949-13338624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
502-840
               

               
Cow position:
               
chr13:45353135-45352779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
502-886
               

               
Cow position:
               
chr13:49796109-49795744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 55
               

               
Conread position:
               
503-705
               

               
Cow position:
               
chr13:62601097-62600899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
503-734
               

               
Cow position:
               
chr13:13765875-13765650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
503-743
               

               
Cow position:
               
chr13:15281847-15282083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 55
               

               
Conread position:
               
503-743
               

               
Cow position:
               
chr13:51901683-51901437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
503-748
               

               
Cow position:
               
chr13:3211642-3211398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
87, 57
               

               
Conread position:
               
503-749
               

               
Cow position:
               
chr13:49520731-49520974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 56
               

               
Conread position:
               
503-759
               

               
Cow position:
               
chr13:9385937-9386187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
218, 15
               

               
Conread position:
               
503-770
               

               
Cow position:
               
chr13:9265742-9266001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
503-803
               

               
Cow position:
               
chr13:11260359-11260070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
503-805
               

               
Cow position:
               
chr13:19393381-19393087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
503-805
               

               
Cow position:
               
chr13:25926881-25926579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 48
               

               
Conread position:
               
503-812
               

               
Cow position:
               
chr13:15991140-15991447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
503-812
               

               
Cow position:
               
chr13:24715334-24715033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 56
               

               
Conread position:
               
503-813
               

               
Cow position:
               
chr13:42200709-42200403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
503-816
               

               
Cow position:
               
chr13:13533579-13533882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 58
               

               
Conread position:
               
503-821
               

               
Cow position:
               
chr13:44003807-44003476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
503-822
               

               
Cow position:
               
chr13:20137915-20137595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
503-822
               

               
Cow position:
               
chr13:20174839-20174512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
503-822
               

               
Cow position:
               
chr13:51528352-51528664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
503-822
               

               
Cow position:
               
chr13:52477555-52477872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
503-827
               

               
Cow position:
               
chr13:20378245-20378546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
503-839
               

               
Cow position:
               
chr13:18989805-18989478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
215, 51
               

               
Conread position:
               
503-863
               

               
Cow position:
               
chr13:51696053-51695702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
504-713
               

               
Cow position:
               
chr13:17622371-17622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
504-796
               

               
Cow position:
               
chr13:57494098-57494373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
504-812
               

               
Cow position:
               
chr13:7332910-7333228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
504-818
               

               
Cow position:
               
chr13:21287996-21288307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 51
               

               
Conread position:
               
505-734
               

               
Cow position:
               
chr13:43194264-43194032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
505-743
               

               
Cow position:
               
chr13:20679428-20679192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
505-789
               

               
Cow position:
               
chr13:20250996-20250708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
505-809
               

               
Cow position:
               
chr13:40491301-40491004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 12
               

               
Conread position:
               
505-811
               

               
Cow position:
               
chr13:30258937-30258633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
505-812
               

               
Cow position:
               
chr13:44278440-44278130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
505-816
               

               
Cow position:
               
chr13:15195121-15195422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
505-819
               

               
Cow position:
               
chr13:54094902-54094604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
505-821
               

               
Cow position:
               
chr13:20473593-20473900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
505-821
               

               
Cow position:
               
chr13:25496094-25495784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
505-822
               

               
Cow position:
               
chr13:867216-866907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
505-822
               

               
Cow position:
               
chr13:15872535-15872211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
79, 55
               

               
Conread position:
               
505-823
               

               
Cow position:
               
chr13:28291414-28291090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
73, 51
               

               
Conread position:
               
505-830
               

               
Cow position:
               
chr13:9846366-9846700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
506-710
               

               
Cow position:
               
chr13:48862008-48862208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
506-783
               

               
Cow position:
               
chr13:42229407-42229114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
506-812
               

               
Cow position:
               
chr13:14940892-14940581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
506-812
               

               
Cow position:
               
chr13:17158787-17159098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 50
               

               
Conread position:
               
506-821
               

               
Cow position:
               
chr13:10040447-10040781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
506-830
               

               
Cow position:
               
chr13:1170556-1170223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
507-720
               

               
Cow position:
               
chr13:185618-185407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
74, 52
               

               
Conread position:
               
508-740
               

               
Cow position:
               
chr13:8524530-8524761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
508-805
               

               
Cow position:
               
chr13:44202082-44201800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
508-810
               

               
Cow position:
               
chr13:18696929-18696609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
508-811
               

               
Cow position:
               
chr13:27550826-27550520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
213, 67
               

               
Conread position:
               
508-821
               

               
Cow position:
               
chr13:19279182-19278871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 45
               

               
Conread position:
               
508-826
               

               
Cow position:
               
chr13:6616666-6616995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
508-827
               

               
Cow position:
               
chr13:10845681-10845387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
508-828
               

               
Cow position:
               
chr13:37069435-37069108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
509-810
               

               
Cow position:
               
chr13:34261316-34261021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
509-831
               

               
Cow position:
               
chr13:13196326-13196006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
510-725
               

               
Cow position:
               
chr13:13913168-13913372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
511-803
               

               
Cow position:
               
chr13:19610482-19610771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
511-811
               

               
Cow position:
               
chr13:58525014-58524727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
45, 12
               

               
Conread position:
               
511-820
               

               
Cow position:
               
chr13:46044241-46043952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
512-740
               

               
Cow position:
               
chr13:17563816-17563596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
214, 8
               

               
Conread position:
               
512-795
               

               
Cow position:
               
chr13:51127988-51128275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 44
               

               
Conread position:
               
512-796
               

               
Cow position:
               
chr13:37521662-37521949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
512-821
               

               
Cow position:
               
chr13:13089109-13088810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
512-864
               

               
Cow position:
               
chr13:33256583-33256231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
76, 44
               

               
Conread position:
               
515-795
               

               
Cow position:
               
chr13:19778770-19779054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
515-811
               

               
Cow position:
               
chr13:1155625-1155920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
515-831
               

               
Cow position:
               
chr13:26480134-26480436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 44
               

               
Conread position:
               
516-822
               

               
Cow position:
               
chr13:20271150-20271457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
517-743
               

               
Cow position:
               
chr13:9981764-9981986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
517-832
               

               
Cow position:
               
chr13:43595032-43595342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
519-821
               

               
Cow position:
               
chr13:25537701-25537411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
520-755
               

               
Cow position:
               
chr13:827316-827085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
205, 36
               

               
Conread position:
               
520-778
               

               
Cow position:
               
chr13:7191058-7190785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
23, 183
               

               
Conread position:
               
520-822
               

               
Cow position:
               
chr13:7149302-7149011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
520-829
               

               
Cow position:
               
chr13:38872878-38873190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 36
               

               
Conread position:
               
521-724
               

               
Cow position:
               
chr13:37946867-37947078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 129
               

               
Conread position:
               
521-728
               

               
Cow position:
               
chr13:37981672-37981875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
521-746
               

               
Cow position:
               
chr13:43869040-43869262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
521-778
               

               
Cow position:
               
chr13:47581152-47581418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
521-811
               

               
Cow position:
               
chr13:41190178-41189886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
521-812
               

               
Cow position:
               
chr13:13471337-13471636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
521-812
               

               
Cow position:
               
chr13:52055521-52055809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
522-799
               

               
Cow position:
               
chr13:20217321-20217601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 21
               

               
Conread position:
               
523-743
               

               
Cow position:
               
chr13:5006063-5005853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
203, 34
               

               
Conread position:
               
523-807
               

               
Cow position:
               
chr13:41157479-41157186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
523-822
               

               
Cow position:
               
chr13:12574709-12574404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
524-803
               

               
Cow position:
               
chr13:19876258-19876545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 36
               

               
Conread position:
               
524-805
               

               
Cow position:
               
chr13:15757190-15756907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
524-811
               

               
Cow position:
               
chr13:42672352-42672645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
525-805
               

               
Cow position:
               
chr13:13320863-13320588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
525-811
               

               
Cow position:
               
chr13:55162280-55161995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
525-812
               

               
Cow position:
               
chr13:25817597-25817313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
525-816
               

               
Cow position:
               
chr13:6861251-6860955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
525-827
               

               
Cow position:
               
chr13:45073182-45073477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
526-706
               

               
Cow position:
               
chr13:52879480-52879293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 34
               

               
Conread position:
               
526-786
               

               
Cow position:
               
chr13:20606046-20606311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
526-807
               

               
Cow position:
               
chr13:20784662-20784383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
526-820
               

               
Cow position:
               
chr13:21107212-21106920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
526-821
               

               
Cow position:
               
chr13:20261252-20261559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
103, 49
               

               
Conread position:
               
526-822
               

               
Cow position:
               
chr13:20360344-20360049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 30
               

               
Conread position:
               
526-827
               

               
Cow position:
               
chr13:7265051-7265337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
530-813
               

               
Cow position:
               
chr13:62008176-62007890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
530-823
               

               
Cow position:
               
chr13:15239456-15239743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
197, 23
               

               
Conread position:
               
532-719
               

               
Cow position:
               
chr13:1242392-1242571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
532-741
               

               
Cow position:
               
chr13:17838011-17837806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
533-727
               

               
Cow position:
               
chr13:25428167-25428353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
534-840
               

               
Cow position:
               
chr13:33962704-33963009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 92
               

               
Conread position:
               
535-810
               

               
Cow position:
               
chr13:15233985-15233732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
535-812
               

               
Cow position:
               
chr13:26726545-26726826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
183, 30
               

               
Conread position:
               
535-826
               

               
Cow position:
               
chr13:45073855-45074134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 106
               

               
Conread position:
               
535-831
               

               
Cow position:
               
chr13:26100456-26100155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
536-746
               

               
Cow position:
               
chr13:11644003-11643791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
47, 196
               

               
Conread position:
               
536-796
               

               
Cow position:
               
chr13:33352291-33352565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
536-822
               

               
Cow position:
               
chr13:18299466-18299166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
542-739
               

               
Cow position:
               
chr13:15460719-15460919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
543-800
               

               
Cow position:
               
chr13:26847762-26848035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 222
               

               
Conread position:
               
546-723
               

               
Cow position:
               
chr13:43829296-43829118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 29
               

               
Conread position:
               
546-740
               

               
Cow position:
               
chr13:9117519-9117709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
546-775
               

               
Cow position:
               
chr13:43893271-43893513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
546-775
               

               
Cow position:
               
chr13:43919210-43919445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
176, 0
               

               
Conread position:
               
546-862
               

               
Cow position:
               
chr13:52640898-52641218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
551-698
               

               
Cow position:
               
chr13:8369204-8369065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
551-713
               

               
Cow position:
               
chr13:60393830-60393668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
551-725
               

               
Cow position:
               
chr13:20231148-20231318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
551-742
               

               
Cow position:
               
chr13:40634900-40634720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
551-749
               

               
Cow position:
               
chr13:53788059-53788265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
551-750
               

               
Cow position:
               
chr13:21283655-21283858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
551-755
               

               
Cow position:
               
chr13:37503534-37503745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 92
               

               
Conread position:
               
551-797
               

               
Cow position:
               
chr13:19174645-19174896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
551-808
               

               
Cow position:
               
chr13:17350400-17350131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
551-811
               

               
Cow position:
               
chr13:11231261-11231512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
551-812
               

               
Cow position:
               
chr13:7149466-7149715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
551-812
               

               
Cow position:
               
chr13:16020899-16020643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
33, 178
               

               
Conread position:
               
551-812
               

               
Cow position:
               
chr13:25561650-25561414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
551-820
               

               
Cow position:
               
chr13:20115300-20115020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
551-821
               

               
Cow position:
               
chr13:11103144-11103436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
551-822
               

               
Cow position:
               
chr13:12925820-12925570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
135, 24
               

               
Conread position:
               
551-822
               

               
Cow position:
               
chr13:17822904-17823180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
551-828
               

               
Cow position:
               
chr13:41549740-41550037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
36, 207
               

               
Conread position:
               
551-876
               

               
Cow position:
               
chr13:49824073-49823745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
552-702
               

               
Cow position:
               
chr13:19183912-19183763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
552-712
               

               
Cow position:
               
chr13:29123351-29123189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
552-719
               

               
Cow position:
               
chr13:18181727-18181897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
552-730
               

               
Cow position:
               
chr13:15144319-15144498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
552-807
               

               
Cow position:
               
chr13:15257323-15257578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
552-810
               

               
Cow position:
               
chr13:19427686-19427420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
552-812
               

               
Cow position:
               
chr13:54286686-54286943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
162, 34
               

               
Conread position:
               
552-816
               

               
Cow position:
               
chr13:46525390-46525649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
170, 28
               

               
Conread position:
               
552-819
               

               
Cow position:
               
chr13:45108366-45108622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 166
               

               
Conread position:
               
552-820
               

               
Cow position:
               
chr13:8233041-8232794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
552-821
               

               
Cow position:
               
chr13:17089477-17089739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
552-822
               

               
Cow position:
               
chr13:21171526-21171796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
552-831
               

               
Cow position:
               
chr13:25504579-25504301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 169
               

               
Conread position:
               
553-759
               

               
Cow position:
               
chr13:20288699-20288485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
553-822
               

               
Cow position:
               
chr13:17611505-17611777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
553-823
               

               
Cow position:
               
chr13:20534939-20534672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 74
               

               
Conread position:
               
553-827
               

               
Cow position:
               
chr13:584827-585107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
554-720
               

               
Cow position:
               
chr13:51856842-51857008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
554-749
               

               
Cow position:
               
chr13:8478447-8478254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
554-810
               

               
Cow position:
               
chr13:20314575-20314839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
554-812
               

               
Cow position:
               
chr13:29663074-29662802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 60
               

               
Conread position:
               
554-828
               

               
Cow position:
               
chr13:21242040-21242306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 176
               

               
Conread position:
               
555-805
               

               
Cow position:
               
chr13:55494477-55494728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 173
               

               
Conread position:
               
555-809
               

               
Cow position:
               
chr13:19007975-19007730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
555-827
               

               
Cow position:
               
chr13:28440492-28440766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
557-725
               

               
Cow position:
               
chr13:6342047-6342216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
557-810
               

               
Cow position:
               
chr13:52459441-52459687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
557-811
               

               
Cow position:
               
chr13:20879783-20880040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
562-803
               

               
Cow position:
               
chr13:12673258-12673495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
21, 139
               

               
Conread position:
               
562-809
               

               
Cow position:
               
chr13:28500023-28500280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 149
               

               
Conread position:
               
562-828
               

               
Cow position:
               
chr13:21866592-21866862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
562-913
               

               
Cow position:
               
chr13:38035872-38035521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
564-797
               

               
Cow position:
               
chr13:8667653-8667414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
564-812
               

               
Cow position:
               
chr13:40154700-40154955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
154, 11
               

               
Conread position:
               
565-725
               

               
Cow position:
               
chr13:31529912-31529750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
18, 153
               

               
Conread position:
               
565-808
               

               
Cow position:
               
chr13:37621331-37621587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
161, 15
               

               
Conread position:
               
565-820
               

               
Cow position:
               
chr13:55081174-55080916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
160, 139
               

               
Conread position:
               
569-807
               

               
Cow position:
               
chr13:14034966-14035210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 163
               

               
Conread position:
               
569-812
               

               
Cow position:
               
chr13:21425801-21426035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
569-821
               

               
Cow position:
               
chr13:6865640-6865889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
569-827
               

               
Cow position:
               
chr13:49255207-49255492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
570-822
               

               
Cow position:
               
chr13:84605-84361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
141, 160
               

               
Conread position:
               
570-834
               

               
Cow position:
               
chr13:34873614-34873347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
159, 16
               

               
Conread position:
               
571-817
               

               
Cow position:
               
chr13:56535482-56535245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
571-821
               

               
Cow position:
               
chr13:11434548-11434800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
572-810
               

               
Cow position:
               
chr13:9161947-9161720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
572-811
               

               
Cow position:
               
chr13:43183273-43183029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
149, 21
               

               
Conread position:
               
573-742
               

               
Cow position:
               
chr13:48554390-48554222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 107
               

               
Conread position:
               
573-828
               

               
Cow position:
               
chr13:11543604-11543328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
574-804
               

               
Cow position:
               
chr13:35557087-35557319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
574-811
               

               
Cow position:
               
chr13:48222525-48222764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
151, 196
               

               
Conread position:
               
575-770
               

               
Cow position:
               
chr13:8350347-8350149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
17, 181
               

               
Conread position:
               
575-798
               

               
Cow position:
               
chr13:18340555-18340328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
575-808
               

               
Cow position:
               
chr13:52057579-52057343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
152, 195
               

               
Conread position:
               
575-809
               

               
Cow position:
               
chr13:48409401-48409155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
575-819
               

               
Cow position:
               
chr13:43525214-43525472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
152, 11
               

               
Conread position:
               
575-822
               

               
Cow position:
               
chr13:13478652-13478907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 133
               

               
Conread position:
               
575-827
               

               
Cow position:
               
chr13:38283954-38284202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
10, 188
               

               
Conread position:
               
575-827
               

               
Cow position:
               
chr13:50457879-50457620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
576-743
               

               
Cow position:
               
chr13:19750734-19750568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
576-812
               

               
Cow position:
               
chr13:15069978-15069756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
576-818
               

               
Cow position:
               
chr13:33054351-33054595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
576-822
               

               
Cow position:
               
chr13:21980955-21981196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
576-822
               

               
Cow position:
               
chr13:37775182-37775434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 132
               

               
Conread position:
               
576-828
               

               
Cow position:
               
chr13:28071895-28071641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 195
               

               
Conread position:
               
576-831
               

               
Cow position:
               
chr13:15993405-15993145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
153, 11
               

               
Conread position:
               
577-821
               

               
Cow position:
               
chr13:42640401-42640154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
579-795
               

               
Cow position:
               
chr13:6465673-6465882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
579-795
               

               
Cow position:
               
chr13:20090361-20090566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
148, 79
               

               
Conread position:
               
579-809
               

               
Cow position:
               
chr13:47675917-47676150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
579-816
               

               
Cow position:
               
chr13:37614173-37614419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
579-827
               

               
Cow position:
               
chr13:18970986-18970751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
579-838
               

               
Cow position:
               
chr13:14927279-14927010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 76
               

               
Conread position:
               
580-724
               

               
Cow position:
               
chr13:25450469-25450612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
580-798
               

               
Cow position:
               
chr13:18615401-18615169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
580-801
               

               
Cow position:
               
chr13:61001859-61001637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
133, 45
               

               
Conread position:
               
580-804
               

               
Cow position:
               
chr13:52934444-52934220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
149, 126
               

               
Conread position:
               
580-810
               

               
Cow position:
               
chr13:10210643-10210867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
581-742
               

               
Cow position:
               
chr13:24110496-24110336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
581-751
               

               
Cow position:
               
chr13:51813920-51814087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
140, 56
               

               
Conread position:
               
581-772
               

               
Cow position:
               
chr13:47193397-47193220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
581-812
               

               
Cow position:
               
chr13:6183404-6183647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
141, 214
               

               
Conread position:
               
581-822
               

               
Cow position:
               
chr13:23804991-23805248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
581-827
               

               
Cow position:
               
chr13:11933587-11933837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
131, 39
               

               
Conread position:
               
581-828
               

               
Cow position:
               
chr13:49392925-49393182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 210
               

               
Conread position:
               
581-872
               

               
Cow position:
               
chr13:49205014-49204737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
145, 43
               

               
Conread position:
               
582-713
               

               
Cow position:
               
chr13:47634522-47634391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
582-795
               

               
Cow position:
               
chr13:11808589-11808382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
582-809
               

               
Cow position:
               
chr13:59461253-59461033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
207, 32
               

               
Conread position:
               
582-811
               

               
Cow position:
               
chr13:15997049-15996821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 198
               

               
Conread position:
               
582-816
               

               
Cow position:
               
chr13:14411909-14411671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
121, 8
               

               
Conread position:
               
582-822
               

               
Cow position:
               
chr13:1462282-1462516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
143, 45
               

               
Conread position:
               
582-822
               

               
Cow position:
               
chr13:33601217-33601454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
582-828
               

               
Cow position:
               
chr13:14645066-14644819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 47
               

               
Conread position:
               
582-859
               

               
Cow position:
               
chr13:3209306-3209586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
114, 17
               

               
Conread position:
               
583-741
               

               
Cow position:
               
chr13:36666261-36666417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
583-772
               

               
Cow position:
               
chr13:16160431-16160244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
583-797
               

               
Cow position:
               
chr13:58149314-58149101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
146, 97
               

               
Conread position:
               
583-809
               

               
Cow position:
               
chr13:50646621-50646842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
583-812
               

               
Cow position:
               
chr13:57985924-57986150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 138
               

               
Conread position:
               
583-821
               

               
Cow position:
               
chr13:27181055-27180808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
583-828
               

               
Cow position:
               
chr13:15083673-15083427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 63
               

               
Conread position:
               
585-818
               

               
Cow position:
               
chr13:47243543-47243774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
586-733
               

               
Cow position:
               
chr13:48465825-48465967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
586-749
               

               
Cow position:
               
chr13:18517056-18516900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
586-803
               

               
Cow position:
               
chr13:56958979-56958769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
138, 55
               

               
Conread position:
               
586-810
               

               
Cow position:
               
chr13:24215662-24215891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
586-810
               

               
Cow position:
               
chr13:54145465-54145695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 51
               

               
Conread position:
               
586-811
               

               
Cow position:
               
chr13:45439533-45439317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
586-811
               

               
Cow position:
               
chr13:50582809-50583033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
42, 139
               

               
Conread position:
               
586-818
               

               
Cow position:
               
chr13:2776299-2776062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
586-822
               

               
Cow position:
               
chr13:40541094-40541340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
586-826
               

               
Cow position:
               
chr13:55765167-55765410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 119
               

               
Conread position:
               
586-827
               

               
Cow position:
               
chr13:9707738-9707975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
188, 96
               

               
Conread position:
               
587-743
               

               
Cow position:
               
chr13:28652750-28652594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
140, 46
               

               
Conread position:
               
587-764
               

               
Cow position:
               
chr13:13182204-13182031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
134, 61
               

               
Conread position:
               
587-790
               

               
Cow position:
               
chr13:9246741-9246538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
134, 83
               

               
Conread position:
               
587-809
               

               
Cow position:
               
chr13:6980929-6980712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
587-813
               

               
Cow position:
               
chr13:7104664-7104441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
587-816
               

               
Cow position:
               
chr13:54127810-54128051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
587-823
               

               
Cow position:
               
chr13:6486241-6486480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
139, 66
               

               
Conread position:
               
587-827
               

               
Cow position:
               
chr13:52536574-52536340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
588-822
               

               
Cow position:
               
chr13:49356040-49356273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 220
               

               
Conread position:
               
589-827
               

               
Cow position:
               
chr13:15143835-15144066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
217, 53
               

               
Conread position:
               
590-805
               

               
Cow position:
               
chr13:6926524-6926303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
590-805
               

               
Cow position:
               
chr13:16908224-16908004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
590-812
               

               
Cow position:
               
chr13:33974740-33974530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
590-821
               

               
Cow position:
               
chr13:8699730-8699967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
590-822
               

               
Cow position:
               
chr13:28536315-28536550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
140, 38
               

               
Conread position:
               
590-823
               

               
Cow position:
               
chr13:2340994-2340749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 164
               

               
Conread position:
               
590-823
               

               
Cow position:
               
chr13:20520068-20519844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
590-827
               

               
Cow position:
               
chr13:48439540-48439752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
592-811
               

               
Cow position:
               
chr13:50768601-50768376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
135, 37
               

               
Conread position:
               
592-822
               

               
Cow position:
               
chr13:16096583-16096345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 110
               

               
Conread position:
               
592-823
               

               
Cow position:
               
chr13:25941258-25941491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
132, 114
               

               
Conread position:
               
592-830
               

               
Cow position:
               
chr13:39398658-39398398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 239
               

               
Conread position:
               
593-771
               

               
Cow position:
               
chr13:54652325-54652493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
593-809
               

               
Cow position:
               
chr13:10522937-10522726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
593-812
               

               
Cow position:
               
chr13:13775239-13775469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
593-822
               

               
Cow position:
               
chr13:55775361-55775135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
203, 14
               

               
Conread position:
               
593-831
               

               
Cow position:
               
chr13:17813475-17813236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
129, 165
               

               
Conread position:
               
593-833
               

               
Cow position:
               
chr13:50622809-50623048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
129, 16
               

               
Conread position:
               
594-812
               

               
Cow position:
               
chr13:7046873-7046664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
595-795
               

               
Cow position:
               
chr13:20795207-20795407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
132, 86
               

               
Conread position:
               
595-811
               

               
Cow position:
               
chr13:45130517-45130301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
595-822
               

               
Cow position:
               
chr13:30315509-30315273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
596-807
               

               
Cow position:
               
chr13:20844864-20845081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
13, 110
               

               
Conread position:
               
597-820
               

               
Cow position:
               
chr13:14796205-14795983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
113, 50
               

               
Conread position:
               
598-772
               

               
Cow position:
               
chr13:38702877-38703055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
50, 99
               

               
Conread position:
               
598-789
               

               
Cow position:
               
chr13:37751068-37751263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
129, 53
               

               
Conread position:
               
599-807
               

               
Cow position:
               
chr13:19598667-19598876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
599-812
               

               
Cow position:
               
chr13:8450328-8450117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
599-812
               

               
Cow position:
               
chr13:18092877-18093085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
599-816
               

               
Cow position:
               
chr13:15061483-15061710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 186
               

               
Conread position:
               
599-827
               

               
Cow position:
               
chr13:10279913-10279691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
112, 48
               

               
Conread position:
               
600-820
               

               
Cow position:
               
chr13:42849136-42849354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 167
               

               
Conread position:
               
601-743
               

               
Cow position:
               
chr13:21295071-21294930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
601-811
               

               
Cow position:
               
chr13:9124921-9124713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
601-827
               

               
Cow position:
               
chr13:13781175-13780945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
603-790
               

               
Cow position:
               
chr13:38012326-38012145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
604-822
               

               
Cow position:
               
chr13:30396700-30396490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
604-828
               

               
Cow position:
               
chr13:2393379-2393160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
54, 79
               

               
Conread position:
               
605-812
               

               
Cow position:
               
chr13:52010848-52011062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
94, 44
               

               
Conread position:
               
606-811
               

               
Cow position:
               
chr13:9702452-9702241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
606-812
               

               
Cow position:
               
chr13:33854693-33854897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 173
               

               
Conread position:
               
607-762
               

               
Cow position:
               
chr13:37980768-37980925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
115, 30
               

               
Conread position:
               
607-798
               

               
Cow position:
               
chr13:4404521-4404332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
607-812
               

               
Cow position:
               
chr13:52880878-52881100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
118, 41
               

               
Conread position:
               
607-820
               

               
Cow position:
               
chr13:4790127-4790349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
607-827
               

               
Cow position:
               
chr13:57769999-57770215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
208, 46
               

               
Conread position:
               
607-828
               

               
Cow position:
               
chr13:17619604-17619362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 222
               

               
Conread position:
               
608-747
               

               
Cow position:
               
chr13:6962441-6962302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
119, 45
               

               
Conread position:
               
608-809
               

               
Cow position:
               
chr13:28439398-28439203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
119, 155
               

               
Conread position:
               
608-812
               

               
Cow position:
               
chr13:21902381-21902188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
608-821
               

               
Cow position:
               
chr13:24094328-24094544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
123, 46
               

               
Conread position:
               
608-822
               

               
Cow position:
               
chr13:54236792-54236581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
608-828
               

               
Cow position:
               
chr13:17057859-17058089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
609-812
               

               
Cow position:
               
chr13:43787849-43788064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
609-812
               

               
Cow position:
               
chr13:43839688-43839903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
609-812
               

               
Cow position:
               
chr13:53850812-53850604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
609-827
               

               
Cow position:
               
chr13:3594309-3594101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
609-837
               

               
Cow position:
               
chr13:49283792-49284024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 113
               

               
Conread position:
               
610-784
               

               
Cow position:
               
chr13:9884521-9884343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 146
               

               
Conread position:
               
610-786
               

               
Cow position:
               
chr13:13211871-13211698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
610-811
               

               
Cow position:
               
chr13:13283334-13283123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
611-742
               

               
Cow position:
               
chr13:1075053-1075185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
612-810
               

               
Cow position:
               
chr13:8637683-8637480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
612-810
               

               
Cow position:
               
chr13:17845473-17845270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
612-821
               

               
Cow position:
               
chr13:27198894-27198692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
612-821
               

               
Cow position:
               
chr13:51249395-51249602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
108, 144
               

               
Conread position:
               
612-825
               

               
Cow position:
               
chr13:19222661-19222443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
613-801
               

               
Cow position:
               
chr13:9492754-9492571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
116, 19
               

               
Conread position:
               
613-824
               

               
Cow position:
               
chr13:21188352-21188154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
614-718
               

               
Cow position:
               
chr13:16156242-16156346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
614-811
               

               
Cow position:
               
chr13:11942196-11942390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
157, 113
               

               
Conread position:
               
614-813
               

               
Cow position:
               
chr13:11565820-11565622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
614-821
               

               
Cow position:
               
chr13:2339160-2338967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
192, 17
               

               
Conread position:
               
614-821
               

               
Cow position:
               
chr13:30148580-30148780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
614-822
               

               
Cow position:
               
chr13:11410697-11410482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
614-822
               

               
Cow position:
               
chr13:20042282-20042490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
115, 44
               

               
Conread position:
               
614-822
               

               
Cow position:
               
chr13:30711208-30710994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
102, 90
               

               
Conread position:
               
614-822
               

               
Cow position:
               
chr13:41115825-41115611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
129, 61
               

               
Conread position:
               
614-826
               

               
Cow position:
               
chr13:53865619-53865403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
119, 168
               

               
Conread position:
               
614-852
               

               
Cow position:
               
chr13:13796828-13797077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
615-808
               

               
Cow position:
               
chr13:1539222-1539024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
128, 6
               

               
Conread position:
               
615-812
               

               
Cow position:
               
chr13:22601713-22601902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
615-821
               

               
Cow position:
               
chr13:21277485-21277679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
615-822
               

               
Cow position:
               
chr13:2233322-2233526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 162
               

               
Conread position:
               
615-837
               

               
Cow position:
               
chr13:22046026-22046251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 150
               

               
Conread position:
               
616-743
               

               
Cow position:
               
chr13:12237426-12237298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
616-807
               

               
Cow position:
               
chr13:17958816-17958629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 9
               

               
Conread position:
               
616-812
               

               
Cow position:
               
chr13:54627469-54627265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
617-743
               

               
Cow position:
               
chr13:20826743-20826871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
617-773
               

               
Cow position:
               
chr13:17716534-17716695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
617-774
               

               
Cow position:
               
chr13:47227379-47227547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
617-809
               

               
Cow position:
               
chr13:52913853-52913663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
617-810
               

               
Cow position:
               
chr13:34532952-34533143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
617-811
               

               
Cow position:
               
chr13:37517197-37517402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
89, 175
               

               
Conread position:
               
617-815
               

               
Cow position:
               
chr13:20440636-20440837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
617-822
               

               
Cow position:
               
chr13:31507464-31507667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
158, 98
               

               
Conread position:
               
617-826
               

               
Cow position:
               
chr13:26709834-26709619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
617-895
               

               
Cow position:
               
chr13:18997368-18997101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
225, 76
               

               
Conread position:
               
618-832
               

               
Cow position:
               
chr13:41979170-41979375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
133, 21
               

               
Conread position:
               
618-833
               

               
Cow position:
               
chr13:45499208-45498994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
190, 115
               

               
Conread position:
               
619-810
               

               
Cow position:
               
chr13:43576989-43576796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
111, 7
               

               
Conread position:
               
619-821
               

               
Cow position:
               
chr13:37030320-37030122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
193, 86
               

               
Conread position:
               
619-821
               

               
Cow position:
               
chr13:38605383-38605192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
619-821
               

               
Cow position:
               
chr13:45141940-45142161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
619-826
               

               
Cow position:
               
chr13:3153728-3153517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
620-768
               

               
Cow position:
               
chr13:16790186-16790041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
620-811
               

               
Cow position:
               
chr13:10711438-10711628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
107, 165
               

               
Conread position:
               
620-821
               

               
Cow position:
               
chr13:26423028-26422812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
620-824
               

               
Cow position:
               
chr13:369146-369354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
113, 74
               

               
Conread position:
               
620-825
               

               
Cow position:
               
chr13:2907276-2907074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 155
               

               
Conread position:
               
621-783
               

               
Cow position:
               
chr13:9391536-9391377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
621-827
               

               
Cow position:
               
chr13:37554898-37555103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 32
               

               
Conread position:
               
622-804
               

               
Cow position:
               
chr13:50715124-50714938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
622-821
               

               
Cow position:
               
chr13:22345302-22345500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
142, 26
               

               
Conread position:
               
622-822
               

               
Cow position:
               
chr13:3149458-3149660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
623-770
               

               
Cow position:
               
chr13:20531500-20531649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
623-797
               

               
Cow position:
               
chr13:6975871-6976042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
623-810
               

               
Cow position:
               
chr13:16163556-16163374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
623-811
               

               
Cow position:
               
chr13:17836965-17837152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
623-811
               

               
Cow position:
               
chr13:29805046-29805228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
623-812
               

               
Cow position:
               
chr13:6113552-6113748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
623-816
               

               
Cow position:
               
chr13:8392923-8393102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
623-821
               

               
Cow position:
               
chr13:42302066-42302267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
110, 27
               

               
Conread position:
               
623-822
               

               
Cow position:
               
chr13:16099147-16099356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
623-822
               

               
Cow position:
               
chr13:47340292-47340100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
623-827
               

               
Cow position:
               
chr13:11147031-11146823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
106, 189
               

               
Conread position:
               
623-827
               

               
Cow position:
               
chr13:21246735-21246944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
106, 207
               

               
Conread position:
               
623-831
               

               
Cow position:
               
chr13:27027924-27028138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 189
               

               
Conread position:
               
623-858
               

               
Cow position:
               
chr13:23975193-23975428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
104, 56
               

               
Conread position:
               
625-827
               

               
Cow position:
               
chr13:13504297-13504502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
625-830
               

               
Cow position:
               
chr13:10715835-10715627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 179
               

               
Conread position:
               
627-789
               

               
Cow position:
               
chr13:49626326-49626151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
627-819
               

               
Cow position:
               
chr13:56019025-56019219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
627-824
               

               
Cow position:
               
chr13:17994403-17994603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
628-798
               

               
Cow position:
               
chr13:16834561-16834738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
628-801
               

               
Cow position:
               
chr13:52027168-52027341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
146, 101
               

               
Conread position:
               
628-809
               

               
Cow position:
               
chr13:54682077-54681880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
628-810
               

               
Cow position:
               
chr13:20535668-20535492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
168, 101
               

               
Conread position:
               
628-816
               

               
Cow position:
               
chr13:25520946-25521144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
628-819
               

               
Cow position:
               
chr13:52177570-52177375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
628-820
               

               
Cow position:
               
chr13:1363424-1363235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
178, 101
               

               
Conread position:
               
628-821
               

               
Cow position:
               
chr13:52464710-52464513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 52
               

               
Conread position:
               
629-810
               

               
Cow position:
               
chr13:43811908-43811714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
629-814
               

               
Cow position:
               
chr13:16525255-16525448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
629-820
               

               
Cow position:
               
chr13:29665987-29665794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
101, 10
               

               
Conread position:
               
629-827
               

               
Cow position:
               
chr13:2776826-2776625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 8
               

               
Conread position:
               
629-827
               

               
Cow position:
               
chr13:26959827-26960030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
629-846
               

               
Cow position:
               
chr13:20789542-20789773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
629-861
               

               
Cow position:
               
chr13:42203991-42203758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
96, 7
               

               
Conread position:
               
630-811
               

               
Cow position:
               
chr13:4135849-4135665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
631-811
               

               
Cow position:
               
chr13:21024952-21024768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
631-811
               

               
Cow position:
               
chr13:34141763-34141595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
631-812
               

               
Cow position:
               
chr13:5092428-5092611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
631-812
               

               
Cow position:
               
chr13:48370335-48370516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
631-814
               

               
Cow position:
               
chr13:17135247-17135438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
631-817
               

               
Cow position:
               
chr13:18215332-18215137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 159
               

               
Conread position:
               
631-821
               

               
Cow position:
               
chr13:390674-390861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 154
               

               
Conread position:
               
631-821
               

               
Cow position:
               
chr13:48127074-48126879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
631-821
               

               
Cow position:
               
chr13:57323112-57322923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
181, 96
               

               
Conread position:
               
631-822
               

               
Cow position:
               
chr13:8537788-8537592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
631-822
               

               
Cow position:
               
chr13:24107582-24107774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
181, 98
               

               
Conread position:
               
631-822
               

               
Cow position:
               
chr13:29802581-29802401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
631-823
               

               
Cow position:
               
chr13:16476823-16476630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
98, 181
               

               
Conread position:
               
631-823
               

               
Cow position:
               
chr13:20367913-20368112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
632-807
               

               
Cow position:
               
chr13:40483015-40483191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
632-810
               

               
Cow position:
               
chr13:20156144-20155961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
632-813
               

               
Cow position:
               
chr13:28376595-28376779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
632-822
               

               
Cow position:
               
chr13:12416669-12416865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
632-822
               

               
Cow position:
               
chr13:23478865-23478674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
97, 18
               

               
Conread position:
               
632-827
               

               
Cow position:
               
chr13:23685034-23685236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
632-831
               

               
Cow position:
               
chr13:62251879-62252083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
106, 151
               

               
Conread position:
               
632-832
               

               
Cow position:
               
chr13:28695825-28695626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 72
               

               
Conread position:
               
633-805
               

               
Cow position:
               
chr13:53390503-53390322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
633-822
               

               
Cow position:
               
chr13:47644028-47643821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 164
               

               
Conread position:
               
633-822
               

               
Cow position:
               
chr13:48373354-48373544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
633-822
               

               
Cow position:
               
chr13:53357797-53357600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
110, 96
               

               
Conread position:
               
633-827
               

               
Cow position:
               
chr13:50565349-50565542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 72
               

               
Conread position:
               
633-830
               

               
Cow position:
               
chr13:26316922-26317123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 72
               

               
Conread position:
               
633-831
               

               
Cow position:
               
chr13:24796842-24796652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
634-817
               

               
Cow position:
               
chr13:20875954-20876145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
634-827
               

               
Cow position:
               
chr13:38702666-38702866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
635-797
               

               
Cow position:
               
chr13:57446157-57446314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
637-811
               

               
Cow position:
               
chr13:33517996-33518174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
637-812
               

               
Cow position:
               
chr13:6997114-6996938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
637-812
               

               
Cow position:
               
chr13:8367675-8367502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
637-827
               

               
Cow position:
               
chr13:38334916-38335109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
638-743
               

               
Cow position:
               
chr13:19467379-19467484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
638-809
               

               
Cow position:
               
chr13:42614044-42613878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
638-822
               

               
Cow position:
               
chr13:1339182-1339371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
72, 63
               

               
Conread position:
               
638-828
               

               
Cow position:
               
chr13:17624281-17624085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
91, 63
               

               
Conread position:
               
639-822
               

               
Cow position:
               
chr13:34694054-34694240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
640-803
               

               
Cow position:
               
chr13:1037596-1037429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
640-810
               

               
Cow position:
               
chr13:25679278-25679113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
640-821
               

               
Cow position:
               
chr13:37723537-37723365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
641-793
               

               
Cow position:
               
chr13:52249092-52249240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
134, 88
               

               
Conread position:
               
641-811
               

               
Cow position:
               
chr13:21009795-21009611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
641-812
               

               
Cow position:
               
chr13:13265517-13265348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
641-822
               

               
Cow position:
               
chr13:55713480-55713653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
170, 86
               

               
Conread position:
               
641-822
               

               
Cow position:
               
chr13:57355998-57355831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
641-827
               

               
Cow position:
               
chr13:19178134-19177939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
641-828
               

               
Cow position:
               
chr13:14351538-14351355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
642-827
               

               
Cow position:
               
chr13:10055376-10055185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
642-827
               

               
Cow position:
               
chr13:21012925-21012735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 48
               

               
Conread position:
               
642-841
               

               
Cow position:
               
chr13:6012768-6012966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
643-810
               

               
Cow position:
               
chr13:58662205-58662028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
644-811
               

               
Cow position:
               
chr13:6377660-6377488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
644-812
               

               
Cow position:
               
chr13:6969599-6969781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
644-812
               

               
Cow position:
               
chr13:20510973-20510802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 139
               

               
Conread position:
               
644-812
               

               
Cow position:
               
chr13:55143226-55143058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 86
               

               
Conread position:
               
644-821
               

               
Cow position:
               
chr13:13225841-13225672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
644-822
               

               
Cow position:
               
chr13:23399719-23399542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
83, 162
               

               
Conread position:
               
644-822
               

               
Cow position:
               
chr13:53619957-53619773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
644-825
               

               
Cow position:
               
chr13:5992808-5992616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 144
               

               
Conread position:
               
645-807
               

               
Cow position:
               
chr13:26395413-26395248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
645-821
               

               
Cow position:
               
chr13:20520267-20520087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
645-822
               

               
Cow position:
               
chr13:23823082-23823256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
646-773
               

               
Cow position:
               
chr13:13286428-13286548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
646-810
               

               
Cow position:
               
chr13:56431873-56432035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
646-825
               

               
Cow position:
               
chr13:30693520-30693332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 119
               

               
Conread position:
               
647-812
               

               
Cow position:
               
chr13:714509-714680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
647-812
               

               
Cow position:
               
chr13:34299909-34300064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
647-816
               

               
Cow position:
               
chr13:21955115-21955290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
647-822
               

               
Cow position:
               
chr13:43342518-43342341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
647-827
               

               
Cow position:
               
chr13:5930355-5930538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 141
               

               
Conread position:
               
648-772
               

               
Cow position:
               
chr13:6091459-6091588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
648-806
               

               
Cow position:
               
chr13:20854507-20854670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
79, 66
               

               
Conread position:
               
648-807
               

               
Cow position:
               
chr13:10535039-10534877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 107
               

               
Conread position:
               
648-809
               

               
Cow position:
               
chr13:5175546-5175386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
96, 37
               

               
Conread position:
               
648-809
               

               
Cow position:
               
chr13:37946440-37946599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
648-809
               

               
Cow position:
               
chr13:47538211-47538363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
648-810
               

               
Cow position:
               
chr13:9327138-9327306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 107
               

               
Conread position:
               
648-811
               

               
Cow position:
               
chr13:27871722-27871556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 108
               

               
Conread position:
               
648-812
               

               
Cow position:
               
chr13:41155118-41155271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
648-819
               

               
Cow position:
               
chr13:46298807-46298977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 125
               

               
Conread position:
               
648-820
               

               
Cow position:
               
chr13:38683067-38683250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
648-822
               

               
Cow position:
               
chr13:6951528-6951354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
77, 133
               

               
Conread position:
               
648-822
               

               
Cow position:
               
chr13:16711298-16711120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
648-822
               

               
Cow position:
               
chr13:37405660-37405486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
163, 81
               

               
Conread position:
               
648-825
               

               
Cow position:
               
chr13:4965339-4965170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
163, 32
               

               
Conread position:
               
648-827
               

               
Cow position:
               
chr13:10758076-10757906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
160, 26
               

               
Conread position:
               
648-827
               

               
Cow position:
               
chr13:26377467-26377650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
648-827
               

               
Cow position:
               
chr13:28605442-28605629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
648-834
               

               
Cow position:
               
chr13:13503465-13503280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 117
               

               
Conread position:
               
649-812
               

               
Cow position:
               
chr13:19588820-19588652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
649-822
               

               
Cow position:
               
chr13:28081670-28081488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
649-822
               

               
Cow position:
               
chr13:39347278-39347454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
650-811
               

               
Cow position:
               
chr13:1347219-1347383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
650-812
               

               
Cow position:
               
chr13:10986554-10986725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
650-822
               

               
Cow position:
               
chr13:17975016-17975189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
651-809
               

               
Cow position:
               
chr13:22729456-22729619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
651-809
               

               
Cow position:
               
chr13:23795442-23795593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
155, 7
               

               
Conread position:
               
651-810
               

               
Cow position:
               
chr13:51198757-51198595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
651-811
               

               
Cow position:
               
chr13:9551307-9551148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
651-826
               

               
Cow position:
               
chr13:5659821-5659999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
157, 79
               

               
Conread position:
               
651-827
               

               
Cow position:
               
chr13:21194840-21195016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
159, 78
               

               
Conread position:
               
652-812
               

               
Cow position:
               
chr13:9108730-9108889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
154, 54
               

               
Conread position:
               
652-821
               

               
Cow position:
               
chr13:31398404-31398232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 49
               

               
Conread position:
               
655-811
               

               
Cow position:
               
chr13:21886735-21886896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
655-812
               

               
Cow position:
               
chr13:14782284-14782132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
656-811
               

               
Cow position:
               
chr13:53847180-53847334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
656-822
               

               
Cow position:
               
chr13:17787682-17787854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 49
               

               
Conread position:
               
656-822
               

               
Cow position:
               
chr13:47651475-47651641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
63, 72
               

               
Conread position:
               
656-827
               

               
Cow position:
               
chr13:28587801-28587976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
656-828
               

               
Cow position:
               
chr13:12291994-12292159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
657-822
               

               
Cow position:
               
chr13:4954486-4954316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
658-805
               

               
Cow position:
               
chr13:25313210-25313358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
658-821
               

               
Cow position:
               
chr13:57929631-57929787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
67, 117
               

               
Conread position:
               
658-838
               

               
Cow position:
               
chr13:32914317-32914502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 163
               

               
Conread position:
               
659-828
               

               
Cow position:
               
chr13:24004194-24004360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 115
               

               
Conread position:
               
660-821
               

               
Cow position:
               
chr13:58157120-58157282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
660-828
               

               
Cow position:
               
chr13:29507554-29507382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
50, 45
               

               
Conread position:
               
661-805
               

               
Cow position:
               
chr13:7097522-7097377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
661-808
               

               
Cow position:
               
chr13:5873495-5873646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
661-812
               

               
Cow position:
               
chr13:38396093-38395938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
661-819
               

               
Cow position:
               
chr13:15114407-15114244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
661-820
               

               
Cow position:
               
chr13:16106350-16106197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
661-821
               

               
Cow position:
               
chr13:11439091-11439244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
83, 68
               

               
Conread position:
               
661-821
               

               
Cow position:
               
chr13:20413612-20413780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
661-822
               

               
Cow position:
               
chr13:8682391-8682223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
661-822
               

               
Cow position:
               
chr13:10102608-10102782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 160
               

               
Conread position:
               
661-822
               

               
Cow position:
               
chr13:51107055-51106898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
661-836
               

               
Cow position:
               
chr13:55007836-55008010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
151, 68
               

               
Conread position:
               
662-821
               

               
Cow position:
               
chr13:15092652-15092500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
663-804
               

               
Cow position:
               
chr13:3003408-3003278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
663-811
               

               
Cow position:
               
chr13:3387854-3388007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
663-819
               

               
Cow position:
               
chr13:17278543-17278713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
663-819
               

               
Cow position:
               
chr13:17286780-17286951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
663-819
               

               
Cow position:
               
chr13:17815172-17815018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
64, 39
               

               
Conread position:
               
663-822
               

               
Cow position:
               
chr13:43102917-43102752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
663-827
               

               
Cow position:
               
chr13:2529016-2529182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
62, 164
               

               
Conread position:
               
664-810
               

               
Cow position:
               
chr13:242568-242418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 139
               

               
Conread position:
               
664-812
               

               
Cow position:
               
chr13:17015192-17015337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
664-829
               

               
Cow position:
               
chr13:38484469-38484308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
101, 54
               

               
Conread position:
               
665-822
               

               
Cow position:
               
chr13:24591529-24591368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
665-827
               

               
Cow position:
               
chr13:25924290-25924461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
666-795
               

               
Cow position:
               
chr13:8423336-8423202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
666-819
               

               
Cow position:
               
chr13:39775552-39775713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
666-820
               

               
Cow position:
               
chr13:55327372-55327215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
667-821
               

               
Cow position:
               
chr13:26700596-26700444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
667-822
               

               
Cow position:
               
chr13:26098111-26097955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
136, 64
               

               
Conread position:
               
667-827
               

               
Cow position:
               
chr13:41474802-41474645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 107
               

               
Conread position:
               
668-773
               

               
Cow position:
               
chr13:24288425-24288537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
668-812
               

               
Cow position:
               
chr13:25062106-25061967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
668-824
               

               
Cow position:
               
chr13:27727122-27726973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
142, 61
               

               
Conread position:
               
668-827
               

               
Cow position:
               
chr13:8230084-8229924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 142
               

               
Conread position:
               
670-827
               

               
Cow position:
               
chr13:62260439-62260288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
141, 57
               

               
Conread position:
               
671-808
               

               
Cow position:
               
chr13:62304497-62304357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
671-822
               

               
Cow position:
               
chr13:50545472-50545316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
60, 34
               

               
Conread position:
               
674-820
               

               
Cow position:
               
chr13:9612992-9612851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
676-810
               

               
Cow position:
               
chr13:19182749-19182884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
678-811
               

               
Cow position:
               
chr13:46330017-46330154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
678-820
               

               
Cow position:
               
chr13:8232644-8232793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
681-820
               

               
Cow position:
               
chr13:48165830-48165964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
130, 48
               

               
Conread position:
               
682-812
               

               
Cow position:
               
chr13:53138349-53138224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
683-810
               

               
Cow position:
               
chr13:43577905-43577773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
683-838
               

               
Cow position:
               
chr13:52929349-52929189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
684-816
               

               
Cow position:
               
chr13:48132851-48132721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
685-821
               

               
Cow position:
               
chr13:34606605-34606462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
690-815
               

               
Cow position:
               
chr13:30809466-30809594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
690-826
               

               
Cow position:
               
chr13:26482872-26483011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
695-827
               

               
Cow position:
               
chr13:25532108-25532243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
698-819
               

               
Cow position:
               
chr13:15529350-15529470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
112, 29
               

               
Conread position:
               
698-821
               

               
Cow position:
               
chr13:23480683-23480802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
704-831
               

               
Cow position:
               
chr13:40794449-40794574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
707-812
               

               
Cow position:
               
chr13:45327001-45327101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
710-821
               

               
Cow position:
               
chr13:12302498-12302612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
710-822
               

               
Cow position:
               
chr13:20186547-20186658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
713-822
               

               
Cow position:
               
chr13:15173641-15173748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
720-825
               

               
Cow position:
               
chr13:47356410-47356305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.