Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rret24_n12.5
        

               Conread position:
               466-827
               

               Cow position:
               chr14:48773089-48772741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               250
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               119, 87
               

               Conread position:
               466-835
               

               Cow position:
               chr14:13810125-13809768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               468-812
               

               Cow position:
               chr14:23424441-23424105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               468-827
               

               Cow position:
               chr14:23443202-23442851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               471-743
               

               Cow position:
               chr14:1977888-1978161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               8, 86
               

               Conread position:
               471-825
               

               Cow position:
               chr14:41302653-41303019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 24
               

               Conread position:
               479-783
               

               Cow position:
               chr14:33300876-33300563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               479-808
               

               Cow position:
               chr14:1868634-1868944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               106, 11
               

               Conread position:
               480-822
               

               Cow position:
               chr14:3948931-3949282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               105, 53
               

               Conread position:
               481-811
               

               Cow position:
               chr14:18485083-18485414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               484-797
               

               Cow position:
               chr14:16760562-16760254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               103, 9
               

               Conread position:
               485-772
               

               Cow position:
               chr14:4202928-4203217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 71
               

               Conread position:
               485-810
               

               Cow position:
               chr14:38530131-38529821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               490-731
               

               Cow position:
               chr14:29698195-29698439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               12, 55
               

               Conread position:
               492-724
               

               Cow position:
               chr14:34984022-34983797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               174, 67
               

               Conread position:
               493-743
               

               Cow position:
               chr14:10630968-10631208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               224, 47
               

               Conread position:
               493-814
               

               Cow position:
               chr14:28115028-28115353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 88
               

               Conread position:
               493-822
               

               Cow position:
               chr14:41471812-41472147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               495-635
               

               Cow position:
               chr14:11819967-11820101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               495-693
               

               Cow position:
               chr14:41325281-41325486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               61, 83
               

               Conread position:
               495-717
               

               Cow position:
               chr14:8784338-8784138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               495-722
               

               Cow position:
               chr14:39778906-39778684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               83, 24
               

               Conread position:
               495-725
               

               Cow position:
               chr14:19372497-19372268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               93, 53
               

               Conread position:
               495-726
               

               Cow position:
               chr14:40433076-40432854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               495-734
               

               Cow position:
               chr14:9308382-9308150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               495-742
               

               Cow position:
               chr14:26490587-26490833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               181, 59
               

               Conread position:
               495-742
               

               Cow position:
               chr14:37131811-37131573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               83, 50
               

               Conread position:
               495-743
               

               Cow position:
               chr14:38337991-38338221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               495-744
               

               Cow position:
               chr14:29632730-29632971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               495-746
               

               Cow position:
               chr14:19951725-19951475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               90, 52
               

               Conread position:
               495-748
               

               Cow position:
               chr14:16033164-16032916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               86, 61
               

               Conread position:
               495-750
               

               Cow position:
               chr14:8750231-8749982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               80, 53
               

               Conread position:
               495-776
               

               Cow position:
               chr14:19189192-19188926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 33
               

               Conread position:
               495-797
               

               Cow position:
               chr14:26433088-26433394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               89, 25
               

               Conread position:
               495-805
               

               Cow position:
               chr14:41966396-41966072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 44
               

               Conread position:
               495-806
               

               Cow position:
               chr14:41211009-41210710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 54
               

               Conread position:
               495-810
               

               Cow position:
               chr14:6226471-6226798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               178, 59
               

               Conread position:
               495-812
               

               Cow position:
               chr14:10721573-10721862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               495-812
               

               Cow position:
               chr14:14466321-14466620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               232, 61
               

               Conread position:
               495-812
               

               Cow position:
               chr14:24387604-24387291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 60
               

               Conread position:
               495-812
               

               Cow position:
               chr14:24608122-24607794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               83, 60
               

               Conread position:
               495-812
               

               Cow position:
               chr14:34199693-34200019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 47
               

               Conread position:
               495-812
               

               Cow position:
               chr14:44084322-44084636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 61
               

               Conread position:
               495-813
               

               Cow position:
               chr14:48838751-48838430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 62
               

               Conread position:
               495-814
               

               Cow position:
               chr14:15492752-15492429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               90, 58
               

               Conread position:
               495-821
               

               Cow position:
               chr14:18345578-18345895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 48
               

               Conread position:
               495-821
               

               Cow position:
               chr14:21535165-21535474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 62
               

               Conread position:
               495-821
               

               Cow position:
               chr14:39918607-39918905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               495-822
               

               Cow position:
               chr14:20010153-20010483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               90, 56
               

               Conread position:
               495-822
               

               Cow position:
               chr14:42596536-42596227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 48
               

               Conread position:
               495-824
               

               Cow position:
               chr14:12244226-12244554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 58
               

               Conread position:
               495-827
               

               Cow position:
               chr14:109351-109657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               315, 45
               

               Conread position:
               495-827
               

               Cow position:
               chr14:24417040-24416717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               246
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               78, 55
               

               Conread position:
               495-828
               

               Cow position:
               chr14:20110567-20110897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 57
               

               Conread position:
               495-830
               

               Cow position:
               chr14:16549848-16550169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               495-844
               

               Cow position:
               chr14:23080608-23080950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               256
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               82, 47
               

               Conread position:
               495-845
               

               Cow position:
               chr14:20826631-20826294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 47
               

               Conread position:
               495-873
               

               Cow position:
               chr14:22989190-22988807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 91
               

               Conread position:
               495-919
               

               Cow position:
               chr14:33714527-33714940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 24
               

               Conread position:
               496-693
               

               Cow position:
               chr14:29029985-29029790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 61
               

               Conread position:
               496-741
               

               Cow position:
               chr14:28004131-28003881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               66, 128
               

               Conread position:
               496-743
               

               Cow position:
               chr14:39618221-39618464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               496-746
               

               Cow position:
               chr14:49021748-49021990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               496-778
               

               Cow position:
               chr14:38527578-38527287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               221, 17
               

               Conread position:
               496-789
               

               Cow position:
               chr14:12520154-12520441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               233, 20
               

               Conread position:
               496-797
               

               Cow position:
               chr14:46998200-46997907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 87
               

               Conread position:
               496-810
               

               Cow position:
               chr14:48740716-48741024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               148, 60
               

               Conread position:
               496-812
               

               Cow position:
               chr14:5222134-5222445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               82, 60
               

               Conread position:
               496-816
               

               Cow position:
               chr14:39434105-39434418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               89, 60
               

               Conread position:
               496-821
               

               Cow position:
               chr14:32452407-32452084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               87, 60
               

               Conread position:
               497-718
               

               Cow position:
               chr14:36709273-36709060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               78, 43
               

               Conread position:
               497-742
               

               Cow position:
               chr14:19394513-19394274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               232, 62
               

               Conread position:
               498-625
               

               Cow position:
               chr14:24786094-24785974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               498-716
               

               Cow position:
               chr14:25403785-25403997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               92, 57
               

               Conread position:
               498-720
               

               Cow position:
               chr14:27591801-27592022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               80, 50
               

               Conread position:
               498-725
               

               Cow position:
               chr14:4109324-4109561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               498-725
               

               Cow position:
               chr14:27275314-27275092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               498-734
               

               Cow position:
               chr14:1868231-1868464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 57
               

               Conread position:
               498-742
               

               Cow position:
               chr14:20600538-20600298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               179, 56
               

               Conread position:
               498-742
               

               Cow position:
               chr14:33830449-33830215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               498-743
               

               Cow position:
               chr14:19129662-19129416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 58
               

               Conread position:
               498-743
               

               Cow position:
               chr14:22583294-22583063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               227, 25
               

               Conread position:
               498-743
               

               Cow position:
               chr14:26097543-26097783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               94, 30
               

               Conread position:
               498-743
               

               Cow position:
               chr14:37883765-37884006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               80, 30
               

               Conread position:
               498-757
               

               Cow position:
               chr14:6175735-6175497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               80, 60
               

               Conread position:
               498-767
               

               Cow position:
               chr14:45718113-45718375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               146, 56
               

               Conread position:
               498-768
               

               Cow position:
               chr14:37884260-37884522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               222, 57
               

               Conread position:
               498-771
               

               Cow position:
               chr14:41479510-41479782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               87, 54
               

               Conread position:
               498-801
               

               Cow position:
               chr14:7959921-7959649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               85, 21
               

               Conread position:
               498-804
               

               Cow position:
               chr14:14187485-14187192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               229
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               87, 53
               

               Conread position:
               498-806
               

               Cow position:
               chr14:24981607-24981299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               94, 58
               

               Conread position:
               498-809
               

               Cow position:
               chr14:8541060-8541364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               498-809
               

               Cow position:
               chr14:24236976-24236665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 45
               

               Conread position:
               498-810
               

               Cow position:
               chr14:20712537-20712840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               80, 56
               

               Conread position:
               498-811
               

               Cow position:
               chr14:4227052-4227382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               61, 276
               

               Conread position:
               498-811
               

               Cow position:
               chr14:6490553-6490862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               146, 74
               

               Conread position:
               498-811
               

               Cow position:
               chr14:11043343-11043653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               80, 21
               

               Conread position:
               498-811
               

               Cow position:
               chr14:12667882-12667570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               80, 63
               

               Conread position:
               498-811
               

               Cow position:
               chr14:21284776-21284494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               79, 56
               

               Conread position:
               498-811
               

               Cow position:
               chr14:25682081-25681760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               90, 56
               

               Conread position:
               498-811
               

               Cow position:
               chr14:41809503-41809813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               214, 57
               

               Conread position:
               498-811
               

               Cow position:
               chr14:44237553-44237886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               498-811
               

               Cow position:
               chr14:47276554-47276860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               230, 56
               

               Conread position:
               498-811
               

               Cow position:
               chr14:49929588-49929904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               498-811
               

               Cow position:
               chr14:50589231-50589549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               244
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               58, 118
               

               Conread position:
               498-812
               

               Cow position:
               chr14:19851780-19852096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               83, 58
               

               Conread position:
               498-813
               

               Cow position:
               chr14:22941569-22941901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 58
               

               Conread position:
               498-813
               

               Cow position:
               chr14:38921102-38920796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 58
               

               Conread position:
               498-816
               

               Cow position:
               chr14:10078422-10078090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 50
               

               Conread position:
               498-817
               

               Cow position:
               chr14:33247281-33247585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               498-818
               

               Cow position:
               chr14:29592571-29592882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 58
               

               Conread position:
               498-819
               

               Cow position:
               chr14:26222897-26222569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               87, 56
               

               Conread position:
               498-819
               

               Cow position:
               chr14:35503517-35503197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 58
               

               Conread position:
               498-819
               

               Cow position:
               chr14:50362946-50362625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               498-820
               

               Cow position:
               chr14:10858584-10858272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 45
               

               Conread position:
               498-822
               

               Cow position:
               chr14:5234730-5235051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               132, 63
               

               Conread position:
               498-822
               

               Cow position:
               chr14:33773903-33774195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               89, 22
               

               Conread position:
               498-822
               

               Cow position:
               chr14:36555005-36555298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               498-822
               

               Cow position:
               chr14:39037388-39037065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               248
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               18, 156
               

               Conread position:
               498-822
               

               Cow position:
               chr14:40230486-40230808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               498-825
               

               Cow position:
               chr14:12511749-12512064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               498-826
               

               Cow position:
               chr14:27919585-27919912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               74, 59
               

               Conread position:
               498-826
               

               Cow position:
               chr14:35498349-35498671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               32, 59
               

               Conread position:
               498-827
               

               Cow position:
               chr14:24922254-24921919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               75, 93
               

               Conread position:
               498-827
               

               Cow position:
               chr14:35420610-35420940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 58
               

               Conread position:
               498-829
               

               Cow position:
               chr14:16237354-16237688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 28
               

               Conread position:
               498-830
               

               Cow position:
               chr14:16297926-16297615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               130, 38
               

               Conread position:
               498-838
               

               Cow position:
               chr14:28378513-28378166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 44
               

               Conread position:
               498-838
               

               Cow position:
               chr14:36289648-36289973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 42
               

               Conread position:
               498-842
               

               Cow position:
               chr14:20016552-20016902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 54
               

               Conread position:
               498-849
               

               Cow position:
               chr14:10609837-10609482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               499-721
               

               Cow position:
               chr14:50055543-50055332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               499-725
               

               Cow position:
               chr14:24796275-24796505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               54, 97
               

               Conread position:
               499-747
               

               Cow position:
               chr14:15054837-15055087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 71
               

               Conread position:
               499-787
               

               Cow position:
               chr14:1646040-1646319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 60
               

               Conread position:
               499-804
               

               Cow position:
               chr14:48427225-48426920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 54
               

               Conread position:
               499-806
               

               Cow position:
               chr14:27305304-27304995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               499-812
               

               Cow position:
               chr14:8101941-8101637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               499-812
               

               Cow position:
               chr14:21933189-21933504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 47
               

               Conread position:
               499-819
               

               Cow position:
               chr14:26442188-26442513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               499-827
               

               Cow position:
               chr14:11469996-11470328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               499-827
               

               Cow position:
               chr14:39770081-39770395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               237
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               499-831
               

               Cow position:
               chr14:47672733-47673060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               499-873
               

               Cow position:
               chr14:16256918-16256557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 43
               

               Conread position:
               500-723
               

               Cow position:
               chr14:49086456-49086238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               73, 61
               

               Conread position:
               500-811
               

               Cow position:
               chr14:33791337-33791034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 53
               

               Conread position:
               500-814
               

               Cow position:
               chr14:36254556-36254852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               303, 53
               

               Conread position:
               500-827
               

               Cow position:
               chr14:13846138-13845822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 72
               

               Conread position:
               500-827
               

               Cow position:
               chr14:20640476-20640805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 53
               

               Conread position:
               500-828
               

               Cow position:
               chr14:13042907-13042585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 53
               

               Conread position:
               501-659
               

               Cow position:
               chr14:33326245-33326400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               501-723
               

               Cow position:
               chr14:32371595-32371809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               501-723
               

               Cow position:
               chr14:35018605-35018822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               84, 51
               

               Conread position:
               501-730
               

               Cow position:
               chr14:17841139-17841366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               69, 53
               

               Conread position:
               501-734
               

               Cow position:
               chr14:19360044-19359808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               76, 40
               

               Conread position:
               501-738
               

               Cow position:
               chr14:25779241-25779018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               82, 29
               

               Conread position:
               501-742
               

               Cow position:
               chr14:14317031-14316800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               501-743
               

               Cow position:
               chr14:15825431-15825193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 54
               

               Conread position:
               501-743
               

               Cow position:
               chr14:18657454-18657693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               83, 53
               

               Conread position:
               501-744
               

               Cow position:
               chr14:5573090-5572856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               206, 32
               

               Conread position:
               501-748
               

               Cow position:
               chr14:45605241-45605001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               77, 53
               

               Conread position:
               501-772
               

               Cow position:
               chr14:1859466-1859723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               84, 56
               

               Conread position:
               501-772
               

               Cow position:
               chr14:37447320-37447588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 54
               

               Conread position:
               501-778
               

               Cow position:
               chr14:27077135-27076840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               76, 31
               

               Conread position:
               501-791
               

               Cow position:
               chr14:18904462-18904727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               90, 42
               

               Conread position:
               501-795
               

               Cow position:
               chr14:40165573-40165286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 55
               

               Conread position:
               501-797
               

               Cow position:
               chr14:23712837-23712550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               222
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               127, 49
               

               Conread position:
               501-797
               

               Cow position:
               chr14:42247139-42246859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               220, 58
               

               Conread position:
               501-801
               

               Cow position:
               chr14:7695411-7695115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 31
               

               Conread position:
               501-803
               

               Cow position:
               chr14:30756992-30756690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               84, 50
               

               Conread position:
               501-805
               

               Cow position:
               chr14:5630311-5630015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 55
               

               Conread position:
               501-809
               

               Cow position:
               chr14:7800064-7799760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               83, 52
               

               Conread position:
               501-809
               

               Cow position:
               chr14:49824474-49824770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               60, 7
               

               Conread position:
               501-810
               

               Cow position:
               chr14:5025432-5025120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               183, 58
               

               Conread position:
               501-810
               

               Cow position:
               chr14:36167088-36166782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 14
               

               Conread position:
               501-811
               

               Cow position:
               chr14:8945934-8946242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               94, 53
               

               Conread position:
               501-811
               

               Cow position:
               chr14:13385518-13385207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               225, 30
               

               Conread position:
               501-811
               

               Cow position:
               chr14:14622025-14622327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 60
               

               Conread position:
               501-811
               

               Cow position:
               chr14:21691123-21691416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               76, 56
               

               Conread position:
               501-811
               

               Cow position:
               chr14:37422638-37422932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 60
               

               Conread position:
               501-811
               

               Cow position:
               chr14:42330501-42330187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               108, 35
               

               Conread position:
               501-812
               

               Cow position:
               chr14:6735711-6736028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 23
               

               Conread position:
               501-812
               

               Cow position:
               chr14:9020177-9019881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               76, 55
               

               Conread position:
               501-812
               

               Cow position:
               chr14:12954233-12954535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 31
               

               Conread position:
               501-812
               

               Cow position:
               chr14:41252839-41253139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               236
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               71, 58
               

               Conread position:
               501-812
               

               Cow position:
               chr14:43046298-43046016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               77, 47
               

               Conread position:
               501-816
               

               Cow position:
               chr14:20301862-20302168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               114, 53
               

               Conread position:
               501-818
               

               Cow position:
               chr14:46685448-46685134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               87, 53
               

               Conread position:
               501-821
               

               Cow position:
               chr14:18309147-18309473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 235
               

               Conread position:
               501-821
               

               Cow position:
               chr14:25986666-25986343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 59
               

               Conread position:
               501-821
               

               Cow position:
               chr14:33341906-33341580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               80, 53
               

               Conread position:
               501-822
               

               Cow position:
               chr14:6599803-6600126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               77, 55
               

               Conread position:
               501-822
               

               Cow position:
               chr14:11056590-11056904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 54
               

               Conread position:
               501-822
               

               Cow position:
               chr14:45045750-45045428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               31, 54
               

               Conread position:
               501-824
               

               Cow position:
               chr14:16344019-16344319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               228, 55
               

               Conread position:
               501-824
               

               Cow position:
               chr14:17755710-17755404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               138, 53
               

               Conread position:
               501-824
               

               Cow position:
               chr14:45052590-45052266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               218, 55
               

               Conread position:
               501-825
               

               Cow position:
               chr14:38143961-38144284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 25
               

               Conread position:
               501-825
               

               Cow position:
               chr14:48689675-48689354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               215, 44
               

               Conread position:
               501-826
               

               Cow position:
               chr14:15518230-15518574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               72, 55
               

               Conread position:
               501-826
               

               Cow position:
               chr14:40754094-40754418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               501-827
               

               Cow position:
               chr14:20666874-20667181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               95, 55
               

               Conread position:
               501-827
               

               Cow position:
               chr14:20932764-20932447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               92, 60
               

               Conread position:
               501-827
               

               Cow position:
               chr14:23682416-23682093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 14
               

               Conread position:
               501-827
               

               Cow position:
               chr14:38747816-38747505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 60
               

               Conread position:
               501-830
               

               Cow position:
               chr14:42154814-42155145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 52
               

               Conread position:
               501-832
               

               Cow position:
               chr14:31130229-31130560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 58
               

               Conread position:
               501-847
               

               Cow position:
               chr14:26620766-26620426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 55
               

               Conread position:
               501-854
               

               Cow position:
               chr14:7036205-7036564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 60
               

               Conread position:
               501-862
               

               Cow position:
               chr14:7480165-7479790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               75, 55
               

               Conread position:
               501-867
               

               Cow position:
               chr14:26628375-26628734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               83, 16
               

               Conread position:
               501-873
               

               Cow position:
               chr14:33456891-33457271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 55
               

               Conread position:
               502-707
               

               Cow position:
               chr14:5633789-5633998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               502-728
               

               Cow position:
               chr14:37678856-37679078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               502-738
               

               Cow position:
               chr14:33309359-33309587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               502-742
               

               Cow position:
               chr14:12035556-12035322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               76, 57
               

               Conread position:
               502-743
               

               Cow position:
               chr14:37156021-37155786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               95, 33
               

               Conread position:
               502-743
               

               Cow position:
               chr14:42437174-42436935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               82, 58
               

               Conread position:
               502-748
               

               Cow position:
               chr14:48961726-48961488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               228, 54
               

               Conread position:
               502-796
               

               Cow position:
               chr14:27848347-27848035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               71, 41
               

               Conread position:
               502-809
               

               Cow position:
               chr14:2974948-2975243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               79, 30
               

               Conread position:
               502-811
               

               Cow position:
               chr14:37446536-37446833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               219, 52
               

               Conread position:
               502-818
               

               Cow position:
               chr14:1802967-1803286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               502-819
               

               Cow position:
               chr14:2038666-2038953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               234
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               502-821
               

               Cow position:
               chr14:48447015-48447334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               109, 54
               

               Conread position:
               502-822
               

               Cow position:
               chr14:12036697-12036997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               502-822
               

               Cow position:
               chr14:12342671-12343016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               502-828
               

               Cow position:
               chr14:27338490-27338160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               75, 50
               

               Conread position:
               503-653
               

               Cow position:
               chr14:33828308-33828163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               85, 53
               

               Conread position:
               503-693
               

               Cow position:
               chr14:3564429-3564245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               503-700
               

               Cow position:
               chr14:22966899-22966710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               503-718
               

               Cow position:
               chr14:20384837-20385049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               85, 51
               

               Conread position:
               503-722
               

               Cow position:
               chr14:46654396-46654609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               80, 51
               

               Conread position:
               503-722
               

               Cow position:
               chr14:48412732-48412950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               78, 53
               

               Conread position:
               503-728
               

               Cow position:
               chr14:30662134-30661925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               503-734
               

               Cow position:
               chr14:11615070-11615301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               81, 54
               

               Conread position:
               503-771
               

               Cow position:
               chr14:7420905-7421177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               157, 54
               

               Conread position:
               503-778
               

               Cow position:
               chr14:41128042-41127780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               503-807
               

               Cow position:
               chr14:42419127-42419434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               221, 17
               

               Conread position:
               503-810
               

               Cow position:
               chr14:12634739-12635035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               503-812
               

               Cow position:
               chr14:38355333-38355048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               75, 38
               

               Conread position:
               503-813
               

               Cow position:
               chr14:4877084-4877388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 53
               

               Conread position:
               503-820
               

               Cow position:
               chr14:6541576-6541898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 53
               

               Conread position:
               503-820
               

               Cow position:
               chr14:26654984-26655305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 51
               

               Conread position:
               503-825
               

               Cow position:
               chr14:7290946-7290621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               218, 63
               

               Conread position:
               503-829
               

               Cow position:
               chr14:19618603-19618920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 55
               

               Conread position:
               503-832
               

               Cow position:
               chr14:17554344-17554673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               89, 53
               

               Conread position:
               504-811
               

               Cow position:
               chr14:35381738-35381430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 53
               

               Conread position:
               504-822
               

               Cow position:
               chr14:38379168-38378832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               74, 46
               

               Conread position:
               505-700
               

               Cow position:
               chr14:33338328-33338521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               67, 51
               

               Conread position:
               505-740
               

               Cow position:
               chr14:44258072-44257837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               73, 47
               

               Conread position:
               505-811
               

               Cow position:
               chr14:27823578-27823273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               70, 8
               

               Conread position:
               505-820
               

               Cow position:
               chr14:8867417-8867731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               193, 54
               

               Conread position:
               505-820
               

               Cow position:
               chr14:47252079-47252402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               125, 52
               

               Conread position:
               505-821
               

               Cow position:
               chr14:14949067-14949384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               97, 51
               

               Conread position:
               505-822
               

               Cow position:
               chr14:30760363-30760045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 35
               

               Conread position:
               505-827
               

               Cow position:
               chr14:27355549-27355218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               505-831
               

               Cow position:
               chr14:4024857-4025168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               27, 55
               

               Conread position:
               506-686
               

               Cow position:
               chr14:33643637-33643809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               158, 48
               

               Conread position:
               506-743
               

               Cow position:
               chr14:18763300-18763522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               506-811
               

               Cow position:
               chr14:28153601-28153904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               213, 50
               

               Conread position:
               506-812
               

               Cow position:
               chr14:8786407-8786697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               506-822
               

               Cow position:
               chr14:20954831-20954514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               215, 53
               

               Conread position:
               507-811
               

               Cow position:
               chr14:21224787-21224484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               508-725
               

               Cow position:
               chr14:19863290-19863505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               83, 48
               

               Conread position:
               508-727
               

               Cow position:
               chr14:25385743-25385959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 47
               

               Conread position:
               508-740
               

               Cow position:
               chr14:40283762-40283529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               508-809
               

               Cow position:
               chr14:49817554-49817843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               73, 27
               

               Conread position:
               508-811
               

               Cow position:
               chr14:36437342-36437648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               107, 73
               

               Conread position:
               508-822
               

               Cow position:
               chr14:26116203-26115888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               77, 53
               

               Conread position:
               508-822
               

               Cow position:
               chr14:37103354-37103033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               508-843
               

               Cow position:
               chr14:15997621-15997943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               293, 29
               

               Conread position:
               511-820
               

               Cow position:
               chr14:23090241-23090549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               74, 32
               

               Conread position:
               511-838
               

               Cow position:
               chr14:2937787-2937455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               59, 79
               

               Conread position:
               511-869
               

               Cow position:
               chr14:19321366-19321727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               120, 48
               

               Conread position:
               512-742
               

               Cow position:
               chr14:39926345-39926119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               213, 14
               

               Conread position:
               512-798
               

               Cow position:
               chr14:48496010-48496293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               67, 45
               

               Conread position:
               512-810
               

               Cow position:
               chr14:1777707-1778005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               118, 47
               

               Conread position:
               512-827
               

               Cow position:
               chr14:1708518-1708835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 44
               

               Conread position:
               512-832
               

               Cow position:
               chr14:35532897-35533220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               77, 44
               

               Conread position:
               513-818
               

               Cow position:
               chr14:40474699-40474395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               214, 46
               

               Conread position:
               515-717
               

               Cow position:
               chr14:9901312-9901121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               64, 28
               

               Conread position:
               516-811
               

               Cow position:
               chr14:40209035-40208749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               20, 14
               

               Conread position:
               518-810
               

               Cow position:
               chr14:27394333-27394622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               110, 8
               

               Conread position:
               519-824
               

               Cow position:
               chr14:47170220-47170522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 36
               

               Conread position:
               520-711
               

               Cow position:
               chr14:41180578-41180771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 34
               

               Conread position:
               520-719
               

               Cow position:
               chr14:23478951-23478762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               64, 36
               

               Conread position:
               520-726
               

               Cow position:
               chr14:16834456-16834250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               520-810
               

               Cow position:
               chr14:33229265-33229558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               110, 38
               

               Conread position:
               521-817
               

               Cow position:
               chr14:16352475-16352191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               521-827
               

               Cow position:
               chr14:11285705-11285397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               521-831
               

               Cow position:
               chr14:34331197-34331524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               522-688
               

               Cow position:
               chr14:3162862-3162693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               523-794
               

               Cow position:
               chr14:12127284-12127539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               523-827
               

               Cow position:
               chr14:19193601-19193289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 36
               

               Conread position:
               523-836
               

               Cow position:
               chr14:12081010-12081311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               214, 33
               

               Conread position:
               524-803
               

               Cow position:
               chr14:49906693-49906964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               15, 11
               

               Conread position:
               525-725
               

               Cow position:
               chr14:4991131-4990932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               525-820
               

               Cow position:
               chr14:3194980-3194706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               84, 18
               

               Conread position:
               525-828
               

               Cow position:
               chr14:8848380-8848099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               281, 21
               

               Conread position:
               526-805
               

               Cow position:
               chr14:15504029-15504310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               52, 34
               

               Conread position:
               526-812
               

               Cow position:
               chr14:12509356-12509646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               105, 30
               

               Conread position:
               526-816
               

               Cow position:
               chr14:44557686-44557985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               526-822
               

               Cow position:
               chr14:5836032-5835758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               57, 30
               

               Conread position:
               526-822
               

               Cow position:
               chr14:12072825-12073127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               63, 31
               

               Conread position:
               526-828
               

               Cow position:
               chr14:28304659-28304965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               526-830
               

               Cow position:
               chr14:4282383-4282687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 30
               

               Conread position:
               528-812
               

               Cow position:
               chr14:24945362-24945654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               50, 261
               

               Conread position:
               529-795
               

               Cow position:
               chr14:26941098-26941364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               101, 30
               

               Conread position:
               529-825
               

               Cow position:
               chr14:1796312-1796024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               55, 27
               

               Conread position:
               530-806
               

               Cow position:
               chr14:10693138-10693411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               203, 27
               

               Conread position:
               530-811
               

               Cow position:
               chr14:39415279-39414999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               85, 26
               

               Conread position:
               530-821
               

               Cow position:
               chr14:28987816-28987519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               170, 26
               

               Conread position:
               530-830
               

               Cow position:
               chr14:15944547-15944848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               47, 20
               

               Conread position:
               531-803
               

               Cow position:
               chr14:25228261-25227996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               532-811
               

               Cow position:
               chr14:49714098-49713821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               534-811
               

               Cow position:
               chr14:29965134-29964858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               534-821
               

               Cow position:
               chr14:41486143-41486441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               190, 25
               

               Conread position:
               534-822
               

               Cow position:
               chr14:45312909-45312627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               535-812
               

               Cow position:
               chr14:7636375-7636659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               42, 66
               

               Conread position:
               538-797
               

               Cow position:
               chr14:37902113-37901855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               41, 15
               

               Conread position:
               538-811
               

               Cow position:
               chr14:6865117-6864839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               538-823
               

               Cow position:
               chr14:1715840-1715557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               180, 19
               

               Conread position:
               538-829
               

               Cow position:
               chr14:43192951-43192687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               41, 18
               

               Conread position:
               539-821
               

               Cow position:
               chr14:25225848-25225562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               6, 249
               

               Conread position:
               542-822
               

               Cow position:
               chr14:23103884-23104167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               544-740
               

               Cow position:
               chr14:15039498-15039698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               546-714
               

               Cow position:
               chr14:27791657-27791483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               546-862
               

               Cow position:
               chr14:23962963-23962641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               9, 69
               

               Conread position:
               549-812
               

               Cow position:
               chr14:49488067-49487804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 103
               

               Conread position:
               550-828
               

               Cow position:
               chr14:27998936-27999214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               551-715
               

               Cow position:
               chr14:10697402-10697562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 104
               

               Conread position:
               551-716
               

               Cow position:
               chr14:40034088-40033933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               551-722
               

               Cow position:
               chr14:25399177-25399001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               551-740
               

               Cow position:
               chr14:13426950-13426762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               551-743
               

               Cow position:
               chr14:803791-803598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               23, 115
               

               Conread position:
               551-808
               

               Cow position:
               chr14:8923479-8923743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               21, 38
               

               Conread position:
               551-812
               

               Cow position:
               chr14:12146375-12146641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               551-812
               

               Cow position:
               chr14:48744617-48744355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               32, 73
               

               Conread position:
               551-818
               

               Cow position:
               chr14:36442913-36443183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               551-822
               

               Cow position:
               chr14:47511061-47510799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 6
               

               Conread position:
               551-823
               

               Cow position:
               chr14:41837768-41838027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               37, 177
               

               Conread position:
               551-854
               

               Cow position:
               chr14:21357664-21357358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 106
               

               Conread position:
               552-750
               

               Cow position:
               chr14:25824792-25824601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               552-765
               

               Cow position:
               chr14:33751639-33751426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               26, 110
               

               Conread position:
               552-805
               

               Cow position:
               chr14:25903628-25903379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 34
               

               Conread position:
               552-811
               

               Cow position:
               chr14:15313666-15313399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               552-811
               

               Cow position:
               chr14:24527058-24527322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               552-819
               

               Cow position:
               chr14:41749658-41749923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               552-821
               

               Cow position:
               chr14:45677335-45677061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 40
               

               Conread position:
               552-824
               

               Cow position:
               chr14:6655478-6655761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               31, 157
               

               Conread position:
               552-825
               

               Cow position:
               chr14:11643153-11643419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               553-827
               

               Cow position:
               chr14:16524578-16524297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 135
               

               Conread position:
               554-750
               

               Cow position:
               chr14:3943452-3943645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               554-752
               

               Cow position:
               chr14:2345170-2344969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               19, 172
               

               Conread position:
               554-817
               

               Cow position:
               chr14:49807270-49807008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               28, 102
               

               Conread position:
               555-743
               

               Cow position:
               chr14:34096471-34096659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               121, 20
               

               Conread position:
               556-773
               

               Cow position:
               chr14:19487387-19487183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               556-826
               

               Cow position:
               chr14:27044674-27044962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               557-811
               

               Cow position:
               chr14:14318720-14318465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 42
               

               Conread position:
               557-811
               

               Cow position:
               chr14:44713514-44713257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               557-812
               

               Cow position:
               chr14:29723493-29723736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               195
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               557-822
               

               Cow position:
               chr14:7198600-7198327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 260
               

               Conread position:
               557-826
               

               Cow position:
               chr14:33546256-33546537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               559-796
               

               Cow position:
               chr14:25381517-25381296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               559-815
               

               Cow position:
               chr14:41190988-41191262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               562-725
               

               Cow position:
               chr14:19959640-19959805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               562-738
               

               Cow position:
               chr14:25334152-25333973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               562-805
               

               Cow position:
               chr14:13928664-13928429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               59, 26
               

               Conread position:
               562-827
               

               Cow position:
               chr14:6360496-6360216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 151
               

               Conread position:
               562-827
               

               Cow position:
               chr14:48900268-48899995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               562-845
               

               Cow position:
               chr14:34775655-34775943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               167, 13
               

               Conread position:
               564-820
               

               Cow position:
               chr14:38168784-38168535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               9, 161
               

               Conread position:
               565-822
               

               Cow position:
               chr14:20576859-20577116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               28, 16
               

               Conread position:
               566-811
               

               Cow position:
               chr14:7342543-7342306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               570-743
               

               Cow position:
               chr14:42339252-42339086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               7, 87
               

               Conread position:
               570-797
               

               Cow position:
               chr14:20047623-20047854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               570-803
               

               Cow position:
               chr14:19594052-19594286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               570-807
               

               Cow position:
               chr14:12884348-12884109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               22, 57
               

               Conread position:
               570-812
               

               Cow position:
               chr14:19827395-19827632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               571-716
               

               Cow position:
               chr14:24839864-24839719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               571-810
               

               Cow position:
               chr14:6637143-6637387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               5, 20
               

               Conread position:
               572-748
               

               Cow position:
               chr14:24913959-24913780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 175
               

               Conread position:
               572-822
               

               Cow position:
               chr14:23419882-23419624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               573-743
               

               Cow position:
               chr14:11975655-11975820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               129, 58
               

               Conread position:
               573-743
               

               Cow position:
               chr14:45577013-45577180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               573-812
               

               Cow position:
               chr14:10937760-10937510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               57, 138
               

               Conread position:
               574-743
               

               Cow position:
               chr14:26148637-26148805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               125, 13
               

               Conread position:
               574-811
               

               Cow position:
               chr14:26825270-26825029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               139, 12
               

               Conread position:
               575-743
               

               Cow position:
               chr14:16457595-16457430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               150, 11
               

               Conread position:
               575-811
               

               Cow position:
               chr14:28924249-28924006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               575-817
               

               Cow position:
               chr14:12141824-12142079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               13, 151
               

               Conread position:
               575-820
               

               Cow position:
               chr14:25979349-25979101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               146, 43
               

               Conread position:
               575-830
               

               Cow position:
               chr14:10852109-10851849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               109, 62
               

               Conread position:
               576-810
               

               Cow position:
               chr14:42513355-42513575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 11
               

               Conread position:
               576-820
               

               Cow position:
               chr14:40191663-40191430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               153, 55
               

               Conread position:
               576-828
               

               Cow position:
               chr14:4848425-4848173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 55
               

               Conread position:
               576-830
               

               Cow position:
               chr14:13731019-13731277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               7, 160
               

               Conread position:
               577-716
               

               Cow position:
               chr14:25954125-25954258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               577-804
               

               Cow position:
               chr14:35372132-35372364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               140, 121
               

               Conread position:
               577-822
               

               Cow position:
               chr14:4271302-4271532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               227, 14
               

               Conread position:
               577-831
               

               Cow position:
               chr14:12033165-12033424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               149, 9
               

               Conread position:
               578-810
               

               Cow position:
               chr14:27885095-27884857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               578-821
               

               Cow position:
               chr14:18941210-18941458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               151, 97
               

               Conread position:
               578-839
               

               Cow position:
               chr14:24846044-24845788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               72, 11
               

               Conread position:
               579-821
               

               Cow position:
               chr14:36425336-36425576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               229, 38
               

               Conread position:
               579-826
               

               Cow position:
               chr14:1814583-1814833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 11
               

               Conread position:
               580-804
               

               Cow position:
               chr14:20467004-20466784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 49
               

               Conread position:
               580-811
               

               Cow position:
               chr14:12961661-12961439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               580-816
               

               Cow position:
               chr14:18937076-18937318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               581-699
               

               Cow position:
               chr14:32018184-32018064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               581-743
               

               Cow position:
               chr14:5557048-5557210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               581-810
               

               Cow position:
               chr14:20984411-20984178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               142, 111
               

               Conread position:
               581-811
               

               Cow position:
               chr14:49941081-49940854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               581-812
               

               Cow position:
               chr14:5958914-5959153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               581-821
               

               Cow position:
               chr14:8949710-8949483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               158, 46
               

               Conread position:
               581-827
               

               Cow position:
               chr14:22865797-22866052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               137, 82
               

               Conread position:
               581-830
               

               Cow position:
               chr14:42439839-42440102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               148, 32
               

               Conread position:
               582-742
               

               Cow position:
               chr14:34399726-34399885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               582-742
               

               Cow position:
               chr14:34448899-34449058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               582-745
               

               Cow position:
               chr14:33644029-33643872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               582-804
               

               Cow position:
               chr14:606594-606802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               582-822
               

               Cow position:
               chr14:15428550-15428308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               163, 147
               

               Conread position:
               582-825
               

               Cow position:
               chr14:2959596-2959351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               139, 203
               

               Conread position:
               583-725
               

               Cow position:
               chr14:20349658-20349803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               113, 75
               

               Conread position:
               583-808
               

               Cow position:
               chr14:10706945-10706722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 18
               

               Conread position:
               583-812
               

               Cow position:
               chr14:27733673-27733448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 107
               

               Conread position:
               585-790
               

               Cow position:
               chr14:42423160-42422950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               586-778
               

               Cow position:
               chr14:12924370-12924180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               52, 108
               

               Conread position:
               586-805
               

               Cow position:
               chr14:20481775-20482005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               182
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               141, 76
               

               Conread position:
               586-810
               

               Cow position:
               chr14:24712556-24712792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               586-812
               

               Cow position:
               chr14:38285902-38286145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               96, 16
               

               Conread position:
               586-818
               

               Cow position:
               chr14:25919921-25919682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               127, 66
               

               Conread position:
               586-822
               

               Cow position:
               chr14:22916223-22916467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               139, 90
               

               Conread position:
               587-719
               

               Cow position:
               chr14:2833338-2833470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               588-819
               

               Cow position:
               chr14:22997511-22997762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               137, 121
               

               Conread position:
               588-821
               

               Cow position:
               chr14:27330808-27330563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               588-822
               

               Cow position:
               chr14:31177220-31177447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               589-827
               

               Cow position:
               chr14:31228021-31228265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 125
               

               Conread position:
               589-835
               

               Cow position:
               chr14:11472169-11472414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               140, 19
               

               Conread position:
               590-780
               

               Cow position:
               chr14:45291315-45291499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               590-810
               

               Cow position:
               chr14:16749621-16749850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               136, 215
               

               Conread position:
               590-821
               

               Cow position:
               chr14:11577132-11576899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 92
               

               Conread position:
               590-830
               

               Cow position:
               chr14:18302025-18301777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               106, 198
               

               Conread position:
               590-854
               

               Cow position:
               chr14:41082393-41082669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               591-739
               

               Cow position:
               chr14:30431505-30431652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               591-809
               

               Cow position:
               chr14:23078729-23078949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               592-828
               

               Cow position:
               chr14:18558999-18559234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               229, 115
               

               Conread position:
               593-811
               

               Cow position:
               chr14:15211988-15211775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               11, 71
               

               Conread position:
               593-822
               

               Cow position:
               chr14:20234132-20234362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               136, 187
               

               Conread position:
               594-827
               

               Cow position:
               chr14:26919057-26918818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               126, 60
               

               Conread position:
               595-797
               

               Cow position:
               chr14:18350798-18351012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               596-809
               

               Cow position:
               chr14:11729052-11729264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               596-812
               

               Cow position:
               chr14:14224626-14224407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               120, 108
               

               Conread position:
               598-807
               

               Cow position:
               chr14:7019727-7019942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               6, 35
               

               Conread position:
               599-735
               

               Cow position:
               chr14:2981616-2981750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               599-804
               

               Cow position:
               chr14:9308120-9307914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               127, 183
               

               Conread position:
               599-810
               

               Cow position:
               chr14:36775705-36775505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               10, 50
               

               Conread position:
               599-812
               

               Cow position:
               chr14:43868365-43868146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 77
               

               Conread position:
               599-820
               

               Cow position:
               chr14:1431777-1431986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               599-825
               

               Cow position:
               chr14:15469927-15470160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               118, 54
               

               Conread position:
               599-825
               

               Cow position:
               chr14:29734309-29734535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 158
               

               Conread position:
               599-827
               

               Cow position:
               chr14:46977552-46977780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               40, 122
               

               Conread position:
               600-748
               

               Cow position:
               chr14:40287646-40287499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               600-828
               

               Cow position:
               chr14:12546513-12546732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               127, 48
               

               Conread position:
               601-816
               

               Cow position:
               chr14:21965828-21966040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               601-837
               

               Cow position:
               chr14:27364631-27364394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               601-869
               

               Cow position:
               chr14:16287535-16287266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               126, 49
               

               Conread position:
               602-810
               

               Cow position:
               chr14:7127910-7127702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               603-804
               

               Cow position:
               chr14:11567457-11567261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 116
               

               Conread position:
               604-827
               

               Cow position:
               chr14:20245119-20245345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               606-798
               

               Cow position:
               chr14:25285044-25284850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               118, 29
               

               Conread position:
               606-868
               

               Cow position:
               chr14:40876052-40875795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               607-757
               

               Cow position:
               chr14:15491203-15491047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               607-811
               

               Cow position:
               chr14:9510589-9510386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               110, 14
               

               Conread position:
               607-821
               

               Cow position:
               chr14:4860549-4860329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               116, 92
               

               Conread position:
               607-831
               

               Cow position:
               chr14:37934161-37933952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               608-809
               

               Cow position:
               chr14:33329006-33328808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               16, 124
               

               Conread position:
               608-820
               

               Cow position:
               chr14:34140147-34140360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               113, 23
               

               Conread position:
               609-818
               

               Cow position:
               chr14:21556981-21557191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               120, 80
               

               Conread position:
               609-820
               

               Cow position:
               chr14:11831744-11831967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               609-826
               

               Cow position:
               chr14:19832344-19832566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 100
               

               Conread position:
               610-822
               

               Cow position:
               chr14:7094013-7094234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               611-827
               

               Cow position:
               chr14:39097550-39097329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               612-812
               

               Cow position:
               chr14:50519137-50519337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               112, 173
               

               Conread position:
               613-812
               

               Cow position:
               chr14:37436669-37436883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               613-828
               

               Cow position:
               chr14:36559185-36559405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               118, 163
               

               Conread position:
               614-742
               

               Cow position:
               chr14:26456413-26456286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               614-743
               

               Cow position:
               chr14:23663368-23663493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               110, 10
               

               Conread position:
               614-764
               

               Cow position:
               chr14:42276663-42276517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               113, 40
               

               Conread position:
               614-791
               

               Cow position:
               chr14:12763668-12763846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               76, 128
               

               Conread position:
               614-805
               

               Cow position:
               chr14:24785698-24785506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               614-808
               

               Cow position:
               chr14:20736650-20736458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               113, 7
               

               Conread position:
               614-808
               

               Cow position:
               chr14:45167086-45167270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               614-811
               

               Cow position:
               chr14:8083239-8083037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               614-812
               

               Cow position:
               chr14:8707589-8707396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               614-837
               

               Cow position:
               chr14:11981506-11981274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               52, 28
               

               Conread position:
               615-725
               

               Cow position:
               chr14:24580679-24580570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               617-809
               

               Cow position:
               chr14:145474-145668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               110, 82
               

               Conread position:
               617-810
               

               Cow position:
               chr14:34210577-34210772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               104, 45
               

               Conread position:
               617-811
               

               Cow position:
               chr14:22202091-22202289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               25, 90
               

               Conread position:
               617-814
               

               Cow position:
               chr14:7316833-7316630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               617-821
               

               Cow position:
               chr14:4491473-4491267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               170, 112
               
UCSC Genome Browser
               Conread position:
               617-822
               

               Cow position:
               chr14:8027522-8027739 (view  custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               17, 0
               
UCSC Genome Browser
               
               
               
Conread position: 617-822

               
               
               
Cow position: chr14:23005708-23005504 (view  custom track)

               
               
               
Alignm length: 210

               
               
               
Alignm identity: 145

               
               
               
Alignm E-value: 6e-21

               
               
               
Alignm gaps (pig, cow): 71, 18
UCSC Genome Browser
               
               
               
Conread position: 617-822

               
               
               
Cow position: chr14:35651748-35651950 (view  custom track)

               
               
               
Alignm length: 206

               
               
               
Alignm identity: 159

               
               
               
Alignm E-value: 1.99993e-41

               
               
               
Alignm gaps (pig, cow): 67, 0

               
               
               Conread position:617-827
               
               
               Cow position:chr14:48829702-48829912 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:155
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):198, 147

               
               
               Conread position:618-811
               
               
               Cow position:chr14:18412555-18412753 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:618-827
               
               
               Cow position:chr14:13515956-13516167 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:155
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):111, 42

               
               
               Conread position:618-849
               
               
               Cow position:chr14:11917195-11916971 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):31, 158

               
               
               Conread position:619-778
               
               
               Cow position:chr14:12617463-12617620 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:122
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):5, 109

               
               
               Conread position:619-827
               
               
               Cow position:chr14:18270396-18270180 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:169
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):108, 0

               
               
               Conread position:620-756
               
               
               Cow position:chr14:28707081-28706941 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):100, 0

               
               
               Conread position:620-825
               
               
               Cow position:chr14:37934876-37935082 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:145
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):123, 163

               
               
               Conread position:620-834
               
               
               Cow position:chr14:47224332-47224554 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:169
               
               
               Alignm E-value:5e-39
               
               
               Alignm gaps (pig, cow):107, 30

               
               
               Conread position:621-821
               
               
               Cow position:chr14:3173704-3173894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):106, 0

               
               
               Conread position:621-827
               
               
               Cow position:chr14:41156691-41156896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):106, 157

               
               
               Conread position:622-809
               
               
               Cow position:chr14:15228567-15228388 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:153
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):105, 5

               
               
               Conread position:622-822
               
               
               Cow position:chr14:27653196-27652990 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:160
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):88, 77

               
               
               Conread position:623-744
               
               
               Cow position:chr14:16761579-16761701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:123
               
               
               Alignm identity:97
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):115, 0

               
               
               Conread position:623-764
               
               
               Cow position:chr14:4209537-4209398 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:105
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):106, 0

               
               
               Conread position:623-805
               
               
               Cow position:chr14:20071102-20070909 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:148
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):103, 144

               
               
               Conread position:623-811
               
               
               Cow position:chr14:40347615-40347801 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:142
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):65, 37

               
               
               Conread position:623-827
               
               
               Cow position:chr14:23237639-23237838 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:624-811
               
               
               Cow position:chr14:28465185-28465377 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:625-810
               
               
               Cow position:chr14:41623347-41623168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:139
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:625-827
               
               
               Cow position:chr14:24428678-24428879 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:143
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):109, 0

               
               
               Conread position:626-772
               
               
               Cow position:chr14:8036352-8036203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):102, 0

               
               
               Conread position:626-811
               
               
               Cow position:chr14:33414190-33414382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:136
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):20, 40

               
               
               Conread position:626-812
               
               
               Cow position:chr14:25290837-25290648 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):99, 9

               
               
               Conread position:626-812
               
               
               Cow position:chr14:49500978-49501168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):5, 25

               
               
               Conread position:626-816
               
               
               Cow position:chr14:20483670-20483869 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:144
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:628-772
               
               
               Cow position:chr14:24880583-24880725 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:117
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):100, 14

               
               
               Conread position:628-772
               
               
               Cow position:chr14:42153376-42153525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:117
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:628-773
               
               
               Cow position:chr14:24806622-24806475 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:111
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):95, 23

               
               
               Conread position:628-803
               
               
               Cow position:chr14:39518771-39518596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:130
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):35, 114

               
               
               Conread position:628-805
               
               
               Cow position:chr14:19349862-19349695 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):101, 0

               
               
               Conread position:628-822
               
               
               Cow position:chr14:40107089-40107284 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):60, 66

               
               
               Conread position:629-811
               
               
               Cow position:chr14:30023172-30023359 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:629-822
               
               
               Cow position:chr14:10920538-10920741 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:629-822
               
               
               Cow position:chr14:50326014-50325826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:142
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):100, 39

               
               
               Conread position:630-794
               
               
               Cow position:chr14:44751005-44751168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):91, 7

               
               
               Conread position:631-743
               
               
               Cow position:chr14:33758391-33758279 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:114
               
               
               Alignm identity:98
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):96, 22

               
               
               Conread position:631-810
               
               
               Cow position:chr14:7358047-7357860 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:631-810
               
               
               Cow position:chr14:47200102-47200292 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):95, 6

               
               
               Conread position:631-811
               
               
               Cow position:chr14:3923931-3923757 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):98, 144

               
               
               Conread position:631-818
               
               
               Cow position:chr14:23465026-23465220 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):94, 129

               
               
               Conread position:631-822
               
               
               Cow position:chr14:4481694-4481504 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:145
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:631-822
               
               
               Cow position:chr14:11079475-11079283 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):181, 90

               
               
               Conread position:631-826
               
               
               Cow position:chr14:5668095-5668293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):96, 181

               
               
               Conread position:631-827
               
               
               Cow position:chr14:33468793-33468608 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):49, 74

               
               
               Conread position:631-827
               
               
               Cow position:chr14:41267709-41267894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:632-759
               
               
               Cow position:chr14:13101171-13101288 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:105
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):10, 71

               
               
               Conread position:632-772
               
               
               Cow position:chr14:3125677-3125817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:108
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):96, 64

               
               
               Conread position:632-805
               
               
               Cow position:chr14:18112571-18112744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:132
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):79, 96

               
               
               Conread position:632-835
               
               
               Cow position:chr14:7271228-7271442 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:633-803
               
               
               Cow position:chr14:2794090-2794264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:127
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):57, 91

               
               
               Conread position:633-810
               
               
               Cow position:chr14:37151919-37152093 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:633-822
               
               
               Cow position:chr14:1770940-1771131 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:132
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):151, 94

               
               
               Conread position:634-811
               
               
               Cow position:chr14:46432090-46431908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):50, 43

               
               
               Conread position:634-816
               
               
               Cow position:chr14:20914957-20915145 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:146
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):81, 0

               
               
               Conread position:636-755
               
               
               Cow position:chr14:6384457-6384575 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:98
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):13, 87

               
               
               Conread position:637-812
               
               
               Cow position:chr14:27847367-27847196 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:639-827
               
               
               Cow position:chr14:8590833-8591020 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:139
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:639-827
               
               
               Cow position:chr14:10440943-10440745 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:640-797
               
               
               Cow position:chr14:20513244-20513082 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:123
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:641-797
               
               
               Cow position:chr14:11280100-11280258 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:130
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):81, 0

               
               
               Conread position:641-802
               
               
               Cow position:chr14:2759123-2759283 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:641-808
               
               
               Cow position:chr14:33618316-33618152 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:641-824
               
               
               Cow position:chr14:19774207-19774391 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):87, 17

               
               
               Conread position:641-824
               
               
               Cow position:chr14:32784102-32784287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:152
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):85, 177

               
               
               Conread position:642-812
               
               
               Cow position:chr14:9030293-9030126 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):85, 42

               
               
               Conread position:642-829
               
               
               Cow position:chr14:21592991-21593180 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:150
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):85, 151

               
               
               Conread position:643-878
               
               
               Cow position:chr14:19988048-19988287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):16, 10

               
               
               Conread position:644-797
               
               
               Cow position:chr14:20035732-20035573 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):81, 55

               
               
               Conread position:644-805
               
               
               Cow position:chr14:40806601-40806751 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:129
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):80, 0

               
               
               Conread position:644-811
               
               
               Cow position:chr14:47894126-47893954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:126
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:644-827
               
               
               Cow position:chr14:7382880-7383062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:139
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):16, 25

               
               
               Conread position:644-873
               
               
               Cow position:chr14:39041380-39041140 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:174
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):24, 165

               
               
               Conread position:645-813
               
               
               Cow position:chr14:25912660-25912493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:645-862
               
               
               Cow position:chr14:48745366-48745574 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:151
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:645-1145
               
               
               Cow position:chr14:21538427-21538929 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:503
               
               
               Alignm identity:107
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):77, 0

               
               
               Conread position:646-831
               
               
               Cow position:chr14:36151333-36151145 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:158
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:647-809
               
               
               Cow position:chr14:21530066-21530240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:144
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:647-812
               
               
               Cow position:chr14:14580835-14580683 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:124
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:647-814
               
               
               Cow position:chr14:445294-445133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):151, 80

               
               
               Conread position:647-826
               
               
               Cow position:chr14:24746474-24746281 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:648-772
               
               
               Cow position:chr14:6595625-6595498 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:100
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):77, 0

               
               
               Conread position:648-772
               
               
               Cow position:chr14:31893586-31893460 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:103
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):78, 44

               
               
               Conread position:648-797
               
               
               Cow position:chr14:18266515-18266375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:116
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:648-803
               
               
               Cow position:chr14:24991490-24991346 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:120
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:648-806
               
               
               Cow position:chr14:22230902-22231062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:648-811
               
               
               Cow position:chr14:20010499-20010667 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:128
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:648-811
               
               
               Cow position:chr14:35421076-35421246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:139
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):31, 58

               
               
               Conread position:648-818
               
               
               Cow position:chr14:42546547-42546725 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:135
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):71, 15

               
               
               Conread position:648-822
               
               
               Cow position:chr14:29011037-29011218 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):97, 57

               
               
               Conread position:648-822
               
               
               Cow position:chr14:40952277-40952092 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:648-827
               
               
               Cow position:chr14:29282761-29282577 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:138
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):81, 0

               
               
               Conread position:648-857
               
               
               Cow position:chr14:27609177-27608974 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:162
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):62, 83

               
               
               Conread position:649-824
               
               
               Cow position:chr14:31342217-31342036 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:649-826
               
               
               Cow position:chr14:19633233-19633069 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):160, 78

               
               
               Conread position:650-822
               
               
               Cow position:chr14:41756153-41755983 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:127
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):161, 24

               
               
               Conread position:650-826
               
               
               Cow position:chr14:41871583-41871766 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):80, 30

               
               
               Conread position:651-812
               
               
               Cow position:chr14:37504518-37504352 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:126
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:652-798
               
               
               Cow position:chr14:19772273-19772420 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:113
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):74, 53

               
               
               Conread position:654-822
               
               
               Cow position:chr14:11604882-11604713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):73, 126

               
               
               Conread position:655-810
               
               
               Cow position:chr14:6388883-6389041 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:121
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):17, 140

               
               
               Conread position:656-821
               
               
               Cow position:chr14:45955289-45955116 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:139
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:656-828
               
               
               Cow position:chr14:39996608-39996433 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):67, 51

               
               
               Conread position:657-828
               
               
               Cow position:chr14:12138014-12137841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):68, 126

               
               
               Conread position:657-855
               
               
               Cow position:chr14:19355284-19355088 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):149, 73

               
               
               Conread position:658-778
               
               
               Cow position:chr14:25277766-25277647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:96
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:658-820
               
               
               Cow position:chr14:46114157-46114309 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):148, 72

               
               
               Conread position:658-827
               
               
               Cow position:chr14:12071528-12071702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:132
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:659-807
               
               
               Cow position:chr14:40212252-40212113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:116
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:661-798
               
               
               Cow position:chr14:49563787-49563917 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):34, 67

               
               
               Conread position:661-822
               
               
               Cow position:chr14:15795927-15796094 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:122
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:661-822
               
               
               Cow position:chr14:16769872-16770040 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):67, 44

               
               
               Conread position:661-830
               
               
               Cow position:chr14:2712029-2712189 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):63, 0

               
               
               Conread position:662-822
               
               
               Cow position:chr14:17397790-17397944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:118
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:663-811
               
               
               Cow position:chr14:24754947-24754791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:118
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:663-812
               
               
               Cow position:chr14:21968518-21968668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:123
               
               
               Alignm E-value:9e-35
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:663-821
               
               
               Cow position:chr14:2853141-2852979 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:128
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:663-827
               
               
               Cow position:chr14:5044662-5044501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:132
               
               
               Alignm E-value:9e-35
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:664-812
               
               
               Cow position:chr14:16593372-16593220 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:116
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:665-809
               
               
               Cow position:chr14:21946381-21946231 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:116
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):118, 62

               
               
               Conread position:665-821
               
               
               Cow position:chr14:49555220-49555366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:119
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:665-825
               
               
               Cow position:chr14:31765465-31765302 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:122
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):57, 27

               
               
               Conread position:666-816
               
               
               Cow position:chr14:24749440-24749297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:117
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:666-819
               
               
               Cow position:chr14:10838848-10838696 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:115
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:666-822
               
               
               Cow position:chr14:25467457-25467310 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:119
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):5, 29

               
               
               Conread position:668-806
               
               
               Cow position:chr14:42917895-42917764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:108
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:672-827
               
               
               Cow position:chr14:21427244-21427395 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:675-821
               
               
               Cow position:chr14:5556237-5556088 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:117
               
               
               Alignm E-value:9e-24
               
               
               Alignm gaps (pig, cow):54, 33

               
               
               Conread position:676-812
               
               
               Cow position:chr14:8688541-8688675 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:112
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):29, 16

               
               
               Conread position:678-816
               
               
               Cow position:chr14:10693620-10693756 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:106
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:682-822
               
               
               Cow position:chr14:24757799-24757647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:683-811
               
               
               Cow position:chr14:39795590-39795463 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:102
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:683-827
               
               
               Cow position:chr14:36984690-36984547 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:116
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):77, 46

               
               
               Conread position:685-823
               
               
               Cow position:chr14:50683064-50683203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:111
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):39, 97

               
               
               Conread position:688-827
               
               
               Cow position:chr14:30024985-30024848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:112
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):43, 86

               
               
               Conread position:690-822
               
               
               Cow position:chr14:7781864-7782002 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:107
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:691-816
               
               
               Cow position:chr14:33462163-33462042 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:101
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):120, 27

               
               
               Conread position:695-811
               
               
               Cow position:chr14:38411260-38411146 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:117
               
               
               Alignm identity:95
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:716-822
               
               
               Cow position:chr14:33326695-33326802 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:109
               
               
               Alignm identity:89
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):30, 5

               
               
               Conread position:716-828
               
               
               Cow position:chr14:48762303-48762191 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:114
               
               
               Alignm identity:92
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):88, 5

               
               
               Conread position:716-831
               
               
               Cow position:chr14:29631838-29631724 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:116
               
               
               Alignm identity:91
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:727-822
               
               
               Cow position:chr14:30050023-30050118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:96
               
               
               Alignm identity:81
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:732-853
               
               
               Cow position:chr14:32754309-32754432 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:124
               
               
               Alignm identity:97
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):111, 0
Show alignments to all cow chromosomes.
Conread position:	466-827
Cow position:	chr14:48773089-48772741 (view UCSC Genome Browser custom track)
Alignm length:	364
Alignm identity:	250
Alignm E-value:	7.9874e-44
Alignm gaps (pig, cow):	119, 87
Conread position:	466-835
Cow position:	chr14:13810125-13809768 (view UCSC Genome Browser custom track)
Alignm length:	380
Alignm identity:	271
Alignm E-value:	0
Alignm gaps (pig, cow):	20, 93
Conread position:	468-812
Cow position:	chr14:23424441-23424105 (view UCSC Genome Browser custom track)
Alignm length:	347
Alignm identity:	261
Alignm E-value:	0
Alignm gaps (pig, cow):	19, 9
Conread position:	468-827
Cow position:	chr14:23443202-23442851 (view UCSC Genome Browser custom track)
Alignm length:	362
Alignm identity:	269
Alignm E-value:	0
Alignm gaps (pig, cow):	19, 9
Conread position:	471-743
Cow position:	chr14:1977888-1978161 (view UCSC Genome Browser custom track)
Alignm length:	280
Alignm identity:	203
Alignm E-value:	5e-40
Alignm gaps (pig, cow):	8, 86
Conread position:	471-825
Cow position:	chr14:41302653-41303019 (view UCSC Genome Browser custom track)
Alignm length:	375
Alignm identity:	271
Alignm E-value:	0
Alignm gaps (pig, cow):	5, 24
Conread position:	479-783
Cow position:	chr14:33300876-33300563 (view UCSC Genome Browser custom track)
Alignm length:	321
Alignm identity:	233
Alignm E-value:	2.00386e-43
Alignm gaps (pig, cow):	53, 16
Conread position:	479-808
Cow position:	chr14:1868634-1868944 (view UCSC Genome Browser custom track)
Alignm length:	337
Alignm identity:	245
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	106, 11
Conread position:	480-822
Cow position:	chr14:3948931-3949282 (view UCSC Genome Browser custom track)
Alignm length:	357
Alignm identity:	232
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	105, 53
Conread position:	481-811
Cow position:	chr14:18485083-18485414 (view UCSC Genome Browser custom track)
Alignm length:	340
Alignm identity:	223
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	44, 14
Conread position:	484-797
Cow position:	chr14:16760562-16760254 (view UCSC Genome Browser custom track)
Alignm length:	321
Alignm identity:	232
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	103, 9
Conread position:	485-772
Cow position:	chr14:4202928-4203217 (view UCSC Genome Browser custom track)
Alignm length:	295
Alignm identity:	218
Alignm E-value:	0
Alignm gaps (pig, cow):	94, 71
Conread position:	485-810
Cow position:	chr14:38530131-38529821 (view UCSC Genome Browser custom track)
Alignm length:	326
Alignm identity:	227
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	53, 0
Conread position:	490-731
Cow position:	chr14:29698195-29698439 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	183
Alignm E-value:	8e-34
Alignm gaps (pig, cow):	12, 55
Conread position:	492-724
Cow position:	chr14:34984022-34983797 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	181
Alignm E-value:	6.00036e-42
Alignm gaps (pig, cow):	174, 67
Conread position:	493-743
Cow position:	chr14:10630968-10631208 (view UCSC Genome Browser custom track)
Alignm length:	252
Alignm identity:	177
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	224, 47
Conread position:	493-814
Cow position:	chr14:28115028-28115353 (view UCSC Genome Browser custom track)
Alignm length:	331
Alignm identity:	261
Alignm E-value:	0
Alignm gaps (pig, cow):	79, 88
Conread position:	493-822
Cow position:	chr14:41471812-41472147 (view UCSC Genome Browser custom track)
Alignm length:	343
Alignm identity:	244
Alignm E-value:	8.40779e-45
Alignm gaps (pig, cow):	28, 68
Conread position:	495-635
Cow position:	chr14:11819967-11820101 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	108
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	53, 0
Conread position:	495-693
Cow position:	chr14:41325281-41325486 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	156
Alignm E-value:	8e-34
Alignm gaps (pig, cow):	61, 83