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Cow genome map

           
Conread name:
           
Ss1.1-rret24_n12.5
        

               
Conread position:
               
436-819
               

               
Cow position:
               
chr27:1636797-1637179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
464-782
               

               
Cow position:
               
chr27:17646074-17646373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
120, 25
               

               
Conread position:
               
470-827
               

               
Cow position:
               
chr27:26481118-26481461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
251, 12
               

               
Conread position:
               
474-808
               

               
Cow position:
               
chr27:26111819-26112160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
481-819
               

               
Cow position:
               
chr27:25809440-25809770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
482-791
               

               
Cow position:
               
chr27:29380939-29380636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 74
               

               
Conread position:
               
482-803
               

               
Cow position:
               
chr27:13411281-13411605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
482-811
               

               
Cow position:
               
chr27:16965656-16965330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 74
               

               
Conread position:
               
483-822
               

               
Cow position:
               
chr27:24227718-24228060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
484-805
               

               
Cow position:
               
chr27:29593546-29593867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
485-634
               

               
Cow position:
               
chr27:14902572-14902719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 71
               

               
Conread position:
               
485-810
               

               
Cow position:
               
chr27:16786902-16786587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
250, 50
               

               
Conread position:
               
485-820
               

               
Cow position:
               
chr27:19500155-19500490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
239, 71
               

               
Conread position:
               
485-821
               

               
Cow position:
               
chr27:30582819-30582481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
70, 169
               

               
Conread position:
               
485-823
               

               
Cow position:
               
chr27:28001730-28002059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 74
               

               
Conread position:
               
487-811
               

               
Cow position:
               
chr27:23632673-23632364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
489-812
               

               
Cow position:
               
chr27:28206870-28206558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
492-816
               

               
Cow position:
               
chr27:4720040-4720376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
493-719
               

               
Cow position:
               
chr27:24321258-24321039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 55
               

               
Conread position:
               
493-762
               

               
Cow position:
               
chr27:22418695-22418960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
493-772
               

               
Cow position:
               
chr27:26807491-26807763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
117, 56
               

               
Conread position:
               
493-778
               

               
Cow position:
               
chr27:8168358-8168638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
493-778
               

               
Cow position:
               
chr27:24939976-24939683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
493-809
               

               
Cow position:
               
chr27:8353545-8353252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
295, 33
               

               
Conread position:
               
493-822
               

               
Cow position:
               
chr27:6550529-6550204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 63
               

               
Conread position:
               
495-673
               

               
Cow position:
               
chr27:20789307-20789484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
495-686
               

               
Cow position:
               
chr27:815436-815244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
103, 58
               

               
Conread position:
               
495-700
               

               
Cow position:
               
chr27:4812810-4813015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
495-702
               

               
Cow position:
               
chr27:16625968-16625766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
495-715
               

               
Cow position:
               
chr27:24014670-24014886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
495-717
               

               
Cow position:
               
chr27:26151091-26150869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
495-719
               

               
Cow position:
               
chr27:1123101-1122881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
495-725
               

               
Cow position:
               
chr27:29312602-29312831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
495-739
               

               
Cow position:
               
chr27:4673089-4672842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
495-739
               

               
Cow position:
               
chr27:27136449-27136692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
495-741
               

               
Cow position:
               
chr27:22569842-22569613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
495-741
               

               
Cow position:
               
chr27:31148831-31148592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 61
               

               
Conread position:
               
495-743
               

               
Cow position:
               
chr27:15643241-15642997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 61
               

               
Conread position:
               
495-746
               

               
Cow position:
               
chr27:23472322-23472082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
95, 36
               

               
Conread position:
               
495-751
               

               
Cow position:
               
chr27:18593337-18593087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
495-756
               

               
Cow position:
               
chr27:26959548-26959804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
495-771
               

               
Cow position:
               
chr27:20481307-20481561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
495-787
               

               
Cow position:
               
chr27:20067908-20068196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
495-797
               

               
Cow position:
               
chr27:435305-435001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
75, 94
               

               
Conread position:
               
495-797
               

               
Cow position:
               
chr27:1768552-1768853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 96
               

               
Conread position:
               
495-804
               

               
Cow position:
               
chr27:15378408-15378719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
495-809
               

               
Cow position:
               
chr27:23594386-23594076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
495-809
               

               
Cow position:
               
chr27:26999350-26999666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
495-810
               

               
Cow position:
               
chr27:427039-426726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
495-810
               

               
Cow position:
               
chr27:26087364-26087076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 61
               

               
Conread position:
               
495-811
               

               
Cow position:
               
chr27:15668700-15669019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 67
               

               
Conread position:
               
495-812
               

               
Cow position:
               
chr27:26424516-26424822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
83, 64
               

               
Conread position:
               
495-812
               

               
Cow position:
               
chr27:27245283-27245608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
495-812
               

               
Cow position:
               
chr27:27460505-27460824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
136, 60
               

               
Conread position:
               
495-812
               

               
Cow position:
               
chr27:28018403-28018077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
185, 71
               

               
Conread position:
               
495-813
               

               
Cow position:
               
chr27:19717992-19717651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
495-813
               

               
Cow position:
               
chr27:26865050-26865355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
495-813
               

               
Cow position:
               
chr27:27204347-27204684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
84, 59
               

               
Conread position:
               
495-815
               

               
Cow position:
               
chr27:29493842-29494147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
226, 47
               

               
Conread position:
               
495-816
               

               
Cow position:
               
chr27:4858576-4858868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
495-821
               

               
Cow position:
               
chr27:28496308-28496624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
495-821
               

               
Cow position:
               
chr27:31231023-31231334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
232, 23
               

               
Conread position:
               
495-822
               

               
Cow position:
               
chr27:15454281-15453957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 156
               

               
Conread position:
               
495-822
               

               
Cow position:
               
chr27:16780938-16780602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
495-822
               

               
Cow position:
               
chr27:17331569-17331235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 92
               

               
Conread position:
               
495-822
               

               
Cow position:
               
chr27:22547338-22547645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 58
               

               
Conread position:
               
495-822
               

               
Cow position:
               
chr27:24446088-24446395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
495-822
               

               
Cow position:
               
chr27:27856401-27856082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
495-823
               

               
Cow position:
               
chr27:4944448-4944765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
495-824
               

               
Cow position:
               
chr27:19388084-19387762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 56
               

               
Conread position:
               
495-825
               

               
Cow position:
               
chr27:22386940-22386626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
495-827
               

               
Cow position:
               
chr27:26433740-26434077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
237, 47
               

               
Conread position:
               
495-827
               

               
Cow position:
               
chr27:30890357-30890043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 61
               

               
Conread position:
               
495-841
               

               
Cow position:
               
chr27:22035307-22035645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
495-852
               

               
Cow position:
               
chr27:31219322-31218986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
229, 58
               

               
Conread position:
               
495-940
               

               
Cow position:
               
chr27:14670314-14670747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
496-811
               

               
Cow position:
               
chr27:6925158-6924837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
496-819
               

               
Cow position:
               
chr27:20552698-20553031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
496-821
               

               
Cow position:
               
chr27:28518358-28518042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 23
               

               
Conread position:
               
496-824
               

               
Cow position:
               
chr27:28931725-28932061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
496-825
               

               
Cow position:
               
chr27:10307235-10307562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 47
               

               
Conread position:
               
496-827
               

               
Cow position:
               
chr27:15866286-15865967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
496-827
               

               
Cow position:
               
chr27:21978070-21978404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
151, 60
               

               
Conread position:
               
497-791
               

               
Cow position:
               
chr27:23891007-23890708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
497-809
               

               
Cow position:
               
chr27:22603238-22602931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
230, 33
               

               
Conread position:
               
497-816
               

               
Cow position:
               
chr27:23917969-23918285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
135, 38
               

               
Conread position:
               
497-821
               

               
Cow position:
               
chr27:22220624-22220293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 62
               

               
Conread position:
               
498-634
               

               
Cow position:
               
chr27:20570187-20570053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
498-683
               

               
Cow position:
               
chr27:12429467-12429292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
125, 49
               

               
Conread position:
               
498-683
               

               
Cow position:
               
chr27:25380060-25379873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
498-716
               

               
Cow position:
               
chr27:12191423-12191626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
498-719
               

               
Cow position:
               
chr27:8263270-8263487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
498-720
               

               
Cow position:
               
chr27:20497279-20497054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
498-724
               

               
Cow position:
               
chr27:25720874-25721105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
498-725
               

               
Cow position:
               
chr27:23882311-23882524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
498-725
               

               
Cow position:
               
chr27:26413186-26413411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
498-725
               

               
Cow position:
               
chr27:27038773-27038994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
498-729
               

               
Cow position:
               
chr27:673978-674191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
142, 58
               

               
Conread position:
               
498-733
               

               
Cow position:
               
chr27:21453011-21453260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
498-736
               

               
Cow position:
               
chr27:20247740-20247972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
498-738
               

               
Cow position:
               
chr27:30359472-30359236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
77, 53
               

               
Conread position:
               
498-739
               

               
Cow position:
               
chr27:10992420-10992185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
498-739
               

               
Cow position:
               
chr27:27640935-27641182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
57, 175
               

               
Conread position:
               
498-741
               

               
Cow position:
               
chr27:25277204-25276970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
498-742
               

               
Cow position:
               
chr27:15215300-15215054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
498-743
               

               
Cow position:
               
chr27:8942616-8942864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
498-743
               

               
Cow position:
               
chr27:16589648-16589878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
229, 45
               

               
Conread position:
               
498-743
               

               
Cow position:
               
chr27:20085631-20085383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
498-749
               

               
Cow position:
               
chr27:22225528-22225773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
498-750
               

               
Cow position:
               
chr27:27270475-27270724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
92, 37
               

               
Conread position:
               
498-769
               

               
Cow position:
               
chr27:26919841-26920113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
498-791
               

               
Cow position:
               
chr27:22454711-22455018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 56
               

               
Conread position:
               
498-791
               

               
Cow position:
               
chr27:26239092-26238799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
498-795
               

               
Cow position:
               
chr27:19685644-19685939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
498-797
               

               
Cow position:
               
chr27:26489838-26490136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 56
               

               
Conread position:
               
498-798
               

               
Cow position:
               
chr27:21393436-21393725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
498-802
               

               
Cow position:
               
chr27:7731184-7731510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
498-805
               

               
Cow position:
               
chr27:3306839-3306547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
498-807
               

               
Cow position:
               
chr27:24331788-24331473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 58
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr27:13638928-13639232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
117, 19
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr27:15871227-15870914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr27:20078931-20078620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 58
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr27:22513612-22513926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr27:27020036-27020340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
91, 44
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr27:27442106-27442406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
498-812
               

               
Cow position:
               
chr27:8629806-8630120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
94, 55
               

               
Conread position:
               
498-812
               

               
Cow position:
               
chr27:26643747-26643457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
498-813
               

               
Cow position:
               
chr27:22171367-22171055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
498-813
               

               
Cow position:
               
chr27:30915074-30914760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
498-816
               

               
Cow position:
               
chr27:6500125-6499809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
226, 62
               

               
Conread position:
               
498-818
               

               
Cow position:
               
chr27:7958774-7959082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
224, 58
               

               
Conread position:
               
498-820
               

               
Cow position:
               
chr27:13875798-13875476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
498-820
               

               
Cow position:
               
chr27:20828644-20828957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
498-823
               

               
Cow position:
               
chr27:6541696-6541379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
498-825
               

               
Cow position:
               
chr27:26226224-26226547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
498-827
               

               
Cow position:
               
chr27:13252073-13251770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
498-827
               

               
Cow position:
               
chr27:17472877-17472553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
498-827
               

               
Cow position:
               
chr27:19668727-19669065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
498-827
               

               
Cow position:
               
chr27:20354651-20354337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 58
               

               
Conread position:
               
498-830
               

               
Cow position:
               
chr27:15867463-15867125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 57
               

               
Conread position:
               
498-837
               

               
Cow position:
               
chr27:2592615-2592265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
498-857
               

               
Cow position:
               
chr27:26428066-26428424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
79, 56
               

               
Conread position:
               
498-864
               

               
Cow position:
               
chr27:21408494-21408872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
498-1151
               

               
Cow position:
               
chr27:715569-714919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
499-680
               

               
Cow position:
               
chr27:9090737-9090902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
499-720
               

               
Cow position:
               
chr27:20092772-20092986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
499-725
               

               
Cow position:
               
chr27:20549642-20549868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 36
               

               
Conread position:
               
499-727
               

               
Cow position:
               
chr27:19543842-19544079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
499-728
               

               
Cow position:
               
chr27:1498383-1498156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
499-742
               

               
Cow position:
               
chr27:26407099-26407332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
499-795
               

               
Cow position:
               
chr27:27694705-27695004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
499-806
               

               
Cow position:
               
chr27:27632539-27632833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
7, 55
               

               
Conread position:
               
499-809
               

               
Cow position:
               
chr27:23452525-23452220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
499-813
               

               
Cow position:
               
chr27:20283708-20283397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 57
               

               
Conread position:
               
499-821
               

               
Cow position:
               
chr27:30406971-30407301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
499-822
               

               
Cow position:
               
chr27:16284535-16284233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
499-825
               

               
Cow position:
               
chr27:24477479-24477169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
499-827
               

               
Cow position:
               
chr27:22426766-22427100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
499-831
               

               
Cow position:
               
chr27:17397385-17397715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
500-797
               

               
Cow position:
               
chr27:19661000-19660697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 56
               

               
Conread position:
               
500-806
               

               
Cow position:
               
chr27:18646081-18646389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
500-807
               

               
Cow position:
               
chr27:21669058-21669353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
227, 42
               

               
Conread position:
               
500-824
               

               
Cow position:
               
chr27:23511055-23510716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
500-827
               

               
Cow position:
               
chr27:29184773-29185104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
86, 56
               

               
Conread position:
               
501-678
               

               
Cow position:
               
chr27:20055906-20056078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
38, 33
               

               
Conread position:
               
501-679
               

               
Cow position:
               
chr27:24999676-24999851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
501-686
               

               
Cow position:
               
chr27:707015-706835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
501-694
               

               
Cow position:
               
chr27:26785926-26786116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
501-696
               

               
Cow position:
               
chr27:30672500-30672686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
501-712
               

               
Cow position:
               
chr27:9169581-9169783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
501-724
               

               
Cow position:
               
chr27:26581371-26581592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
38, 54
               

               
Conread position:
               
501-725
               

               
Cow position:
               
chr27:19647875-19648099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
501-728
               

               
Cow position:
               
chr27:12246721-12246494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
501-736
               

               
Cow position:
               
chr27:30354279-30354511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
501-737
               

               
Cow position:
               
chr27:27064376-27064609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
84, 49
               

               
Conread position:
               
501-738
               

               
Cow position:
               
chr27:24371299-24371072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
225, 17
               

               
Conread position:
               
501-742
               

               
Cow position:
               
chr27:28271087-28271323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
501-744
               

               
Cow position:
               
chr27:24738727-24738974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
56, 93
               

               
Conread position:
               
501-749
               

               
Cow position:
               
chr27:24509882-24509640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
501-756
               

               
Cow position:
               
chr27:7974238-7973984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
501-762
               

               
Cow position:
               
chr27:30260829-30261091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
501-789
               

               
Cow position:
               
chr27:23483291-23483008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
501-791
               

               
Cow position:
               
chr27:18739448-18739149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
501-797
               

               
Cow position:
               
chr27:23554266-23554560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 55
               

               
Conread position:
               
501-803
               

               
Cow position:
               
chr27:22489342-22489036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
220, 74
               

               
Conread position:
               
501-804
               

               
Cow position:
               
chr27:23736024-23735731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
501-805
               

               
Cow position:
               
chr27:12596829-12596543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 55
               

               
Conread position:
               
501-811
               

               
Cow position:
               
chr27:30871996-30872302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
501-812
               

               
Cow position:
               
chr27:21991218-21990897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
501-812
               

               
Cow position:
               
chr27:22330604-22330904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 58
               

               
Conread position:
               
501-812
               

               
Cow position:
               
chr27:28190153-28190437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
90, 28
               

               
Conread position:
               
501-812
               

               
Cow position:
               
chr27:29831626-29831954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
501-819
               

               
Cow position:
               
chr27:15925405-15925090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
220, 55
               

               
Conread position:
               
501-819
               

               
Cow position:
               
chr27:30765100-30764780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
501-821
               

               
Cow position:
               
chr27:17994879-17995198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
115, 55
               

               
Conread position:
               
501-821
               

               
Cow position:
               
chr27:27554619-27554933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
228, 52
               

               
Conread position:
               
501-822
               

               
Cow position:
               
chr27:4390192-4390516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
501-822
               

               
Cow position:
               
chr27:12516255-12515937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
501-822
               

               
Cow position:
               
chr27:23930040-23929722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
501-824
               

               
Cow position:
               
chr27:27438444-27438764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 54
               

               
Conread position:
               
501-825
               

               
Cow position:
               
chr27:7935094-7935414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 55
               

               
Conread position:
               
501-825
               

               
Cow position:
               
chr27:18544058-18543730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
501-825
               

               
Cow position:
               
chr27:20045948-20045637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
198, 49
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr27:15315569-15315264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr27:16103872-16103550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr27:20637002-20637318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr27:26509097-26509417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr27:27003210-27003523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
225, 53
               

               
Conread position:
               
501-830
               

               
Cow position:
               
chr27:11480567-11480903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
501-830
               

               
Cow position:
               
chr27:26218770-26218467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 87
               

               
Conread position:
               
501-843
               

               
Cow position:
               
chr27:27405005-27405347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
113, 55
               

               
Conread position:
               
502-723
               

               
Cow position:
               
chr27:28245863-28245648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
152, 41
               

               
Conread position:
               
502-740
               

               
Cow position:
               
chr27:20337175-20336931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
55, 114
               

               
Conread position:
               
502-750
               

               
Cow position:
               
chr27:4385998-4386242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
502-750
               

               
Cow position:
               
chr27:31017771-31018010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
223, 44
               

               
Conread position:
               
502-812
               

               
Cow position:
               
chr27:14343403-14343681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 52
               

               
Conread position:
               
502-818
               

               
Cow position:
               
chr27:26984412-26984102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 57
               

               
Conread position:
               
502-822
               

               
Cow position:
               
chr27:16088872-16088533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 52
               

               
Conread position:
               
502-827
               

               
Cow position:
               
chr27:11435259-11435585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
502-830
               

               
Cow position:
               
chr27:20748944-20749264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 24
               

               
Conread position:
               
503-699
               

               
Cow position:
               
chr27:21976111-21975922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
503-728
               

               
Cow position:
               
chr27:8405763-8405981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
89, 53
               

               
Conread position:
               
503-758
               

               
Cow position:
               
chr27:28260477-28260726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
503-809
               

               
Cow position:
               
chr27:2644023-2644341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
503-810
               

               
Cow position:
               
chr27:8062292-8062596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
503-811
               

               
Cow position:
               
chr27:23128518-23128220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
503-812
               

               
Cow position:
               
chr27:2957463-2957171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
503-818
               

               
Cow position:
               
chr27:28896940-28896622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
189, 9
               

               
Conread position:
               
503-819
               

               
Cow position:
               
chr27:23545263-23545594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
90, 228
               

               
Conread position:
               
503-820
               

               
Cow position:
               
chr27:18558421-18558107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 53
               

               
Conread position:
               
503-822
               

               
Cow position:
               
chr27:23559969-23560285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
503-825
               

               
Cow position:
               
chr27:22559762-22560086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 49
               

               
Conread position:
               
503-827
               

               
Cow position:
               
chr27:18507704-18507385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 50
               

               
Conread position:
               
503-827
               

               
Cow position:
               
chr27:31372916-31373234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
504-725
               

               
Cow position:
               
chr27:30389234-30389454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
504-743
               

               
Cow position:
               
chr27:30988857-30988622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
223, 50
               

               
Conread position:
               
504-744
               

               
Cow position:
               
chr27:6302398-6302642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
504-811
               

               
Cow position:
               
chr27:1353648-1353336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 74
               

               
Conread position:
               
504-813
               

               
Cow position:
               
chr27:12425354-12425041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
504-815
               

               
Cow position:
               
chr27:7346725-7346421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
504-820
               

               
Cow position:
               
chr27:16478278-16478575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 55
               

               
Conread position:
               
504-830
               

               
Cow position:
               
chr27:28921836-28922158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 52
               

               
Conread position:
               
504-835
               

               
Cow position:
               
chr27:20514882-20514550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
505-712
               

               
Cow position:
               
chr27:27843935-27844146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
505-737
               

               
Cow position:
               
chr27:20553780-20553563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
505-821
               

               
Cow position:
               
chr27:7615029-7615326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
307, 51
               

               
Conread position:
               
505-822
               

               
Cow position:
               
chr27:19496934-19496621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
505-826
               

               
Cow position:
               
chr27:19546446-19546782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 153
               

               
Conread position:
               
506-834
               

               
Cow position:
               
chr27:29504587-29504898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
507-743
               

               
Cow position:
               
chr27:4156060-4155820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 195
               

               
Conread position:
               
507-774
               

               
Cow position:
               
chr27:19896813-19896555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
81, 49
               

               
Conread position:
               
508-806
               

               
Cow position:
               
chr27:299326-299614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
508-811
               

               
Cow position:
               
chr27:10979920-10979615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
508-811
               

               
Cow position:
               
chr27:30868683-30868996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
508-819
               

               
Cow position:
               
chr27:30814475-30814163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
508-823
               

               
Cow position:
               
chr27:29693524-29693210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
207, 38
               

               
Conread position:
               
508-824
               

               
Cow position:
               
chr27:31151434-31151127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
225, 42
               

               
Conread position:
               
508-855
               

               
Cow position:
               
chr27:25427841-25428201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
511-812
               

               
Cow position:
               
chr27:8962202-8962487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
511-846
               

               
Cow position:
               
chr27:68257-67954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
295, 45
               

               
Conread position:
               
512-820
               

               
Cow position:
               
chr27:7212658-7212984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
513-827
               

               
Cow position:
               
chr27:23860221-23859898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
514-812
               

               
Cow position:
               
chr27:20101420-20101121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
517-813
               

               
Cow position:
               
chr27:29431506-29431229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
517-825
               

               
Cow position:
               
chr27:23485261-23484955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
520-739
               

               
Cow position:
               
chr27:20803612-20803830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
520-741
               

               
Cow position:
               
chr27:1290805-1291022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
520-812
               

               
Cow position:
               
chr27:27388973-27389273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
73, 33
               

               
Conread position:
               
520-820
               

               
Cow position:
               
chr27:15865656-15865352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
520-845
               

               
Cow position:
               
chr27:2847897-2847596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
520-868
               

               
Cow position:
               
chr27:26852547-26852881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
209, 36
               

               
Conread position:
               
521-822
               

               
Cow position:
               
chr27:1190431-1190739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 25
               

               
Conread position:
               
521-822
               

               
Cow position:
               
chr27:20629106-20628801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
198, 32
               

               
Conread position:
               
522-795
               

               
Cow position:
               
chr27:23107858-23108131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
523-743
               

               
Cow position:
               
chr27:28034818-28035027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
201, 34
               

               
Conread position:
               
523-745
               

               
Cow position:
               
chr27:17918273-17918493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
203, 33
               

               
Conread position:
               
523-795
               

               
Cow position:
               
chr27:10653728-10653453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
525-825
               

               
Cow position:
               
chr27:18882695-18882398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
526-742
               

               
Cow position:
               
chr27:20812950-20812732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
526-743
               

               
Cow position:
               
chr27:20795832-20795617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
526-810
               

               
Cow position:
               
chr27:13940520-13940794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
526-812
               

               
Cow position:
               
chr27:19589515-19589237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
526-819
               

               
Cow position:
               
chr27:7649545-7649844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
116, 29
               

               
Conread position:
               
526-822
               

               
Cow position:
               
chr27:5553510-5553217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
199, 60
               

               
Conread position:
               
527-725
               

               
Cow position:
               
chr27:536503-536308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
527-813
               

               
Cow position:
               
chr27:16705290-16705006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 29
               

               
Conread position:
               
527-820
               

               
Cow position:
               
chr27:16275623-16275934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
528-822
               

               
Cow position:
               
chr27:20517696-20517396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
529-811
               

               
Cow position:
               
chr27:14269306-14269575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
530-765
               

               
Cow position:
               
chr27:14303769-14303541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
103, 30
               

               
Conread position:
               
531-738
               

               
Cow position:
               
chr27:18922796-18923003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
531-797
               

               
Cow position:
               
chr27:29841691-29841951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 190
               

               
Conread position:
               
532-743
               

               
Cow position:
               
chr27:15343247-15343453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
533-811
               

               
Cow position:
               
chr27:19933097-19932821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
200, 23
               

               
Conread position:
               
534-811
               

               
Cow position:
               
chr27:6290503-6290229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
534-822
               

               
Cow position:
               
chr27:26793757-26794042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 25
               

               
Conread position:
               
534-827
               

               
Cow position:
               
chr27:13254772-13255053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
184, 22
               

               
Conread position:
               
535-811
               

               
Cow position:
               
chr27:7412419-7412148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 53
               

               
Conread position:
               
538-822
               

               
Cow position:
               
chr27:31386607-31386885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
540-821
               

               
Cow position:
               
chr27:31557108-31556839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
10, 150
               

               
Conread position:
               
547-777
               

               
Cow position:
               
chr27:16230914-16231151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 41
               

               
Conread position:
               
549-743
               

               
Cow position:
               
chr27:22348508-22348314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
551-724
               

               
Cow position:
               
chr27:20641315-20641489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 155
               

               
Conread position:
               
551-748
               

               
Cow position:
               
chr27:4835585-4835784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
551-750
               

               
Cow position:
               
chr27:22423528-22423330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
175, 24
               

               
Conread position:
               
551-805
               

               
Cow position:
               
chr27:25152100-25151850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
182, 24
               

               
Conread position:
               
551-811
               

               
Cow position:
               
chr27:212982-212706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
551-812
               

               
Cow position:
               
chr27:11561794-11561529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
551-816
               

               
Cow position:
               
chr27:22440158-22439887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
551-824
               

               
Cow position:
               
chr27:20584438-20584723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
552-681
               

               
Cow position:
               
chr27:3915-3784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
552-687
               

               
Cow position:
               
chr27:21130326-21130187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
552-728
               

               
Cow position:
               
chr27:237287-237111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 126
               

               
Conread position:
               
552-740
               

               
Cow position:
               
chr27:18767045-18767232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
552-743
               

               
Cow position:
               
chr27:20758026-20758205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
552-743
               

               
Cow position:
               
chr27:24305455-24305264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
552-785
               

               
Cow position:
               
chr27:28242991-28242759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 40
               

               
Conread position:
               
552-812
               

               
Cow position:
               
chr27:590743-591014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
552-812
               

               
Cow position:
               
chr27:15409017-15409271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
552-827
               

               
Cow position:
               
chr27:29798971-29798691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
552-839
               

               
Cow position:
               
chr27:22421832-22422121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 230
               

               
Conread position:
               
553-738
               

               
Cow position:
               
chr27:20037098-20037286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 140
               

               
Conread position:
               
553-772
               

               
Cow position:
               
chr27:15825708-15825929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 34
               

               
Conread position:
               
553-809
               

               
Cow position:
               
chr27:26853341-26853594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
553-824
               

               
Cow position:
               
chr27:26617416-26617156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
260, 17
               

               
Conread position:
               
554-820
               

               
Cow position:
               
chr27:19509030-19508757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
554-835
               

               
Cow position:
               
chr27:12459300-12459024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
555-820
               

               
Cow position:
               
chr27:29597735-29597999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 65
               

               
Conread position:
               
555-822
               

               
Cow position:
               
chr27:17933942-17933668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
556-725
               

               
Cow position:
               
chr27:23943154-23942990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
556-822
               

               
Cow position:
               
chr27:20897010-20897276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
557-743
               

               
Cow position:
               
chr27:1789124-1789314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
557-787
               

               
Cow position:
               
chr27:28478594-28478363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 175
               

               
Conread position:
               
557-810
               

               
Cow position:
               
chr27:11982636-11982892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 16
               

               
Conread position:
               
558-820
               

               
Cow position:
               
chr27:31210559-31210295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
559-796
               

               
Cow position:
               
chr27:26188840-26188597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
29, 85
               

               
Conread position:
               
559-811
               

               
Cow position:
               
chr27:13607664-13607909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 121
               

               
Conread position:
               
559-826
               

               
Cow position:
               
chr27:26437108-26437383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
562-819
               

               
Cow position:
               
chr27:22549762-22550023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
116, 17
               

               
Conread position:
               
562-821
               

               
Cow position:
               
chr27:31004949-31004685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 175
               

               
Conread position:
               
564-743
               

               
Cow position:
               
chr27:27673016-27673191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
564-796
               

               
Cow position:
               
chr27:13317972-13318207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
165, 9
               

               
Conread position:
               
564-811
               

               
Cow position:
               
chr27:24303946-24303698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
162, 11
               

               
Conread position:
               
566-812
               

               
Cow position:
               
chr27:27058403-27058651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
162, 48
               

               
Conread position:
               
566-823
               

               
Cow position:
               
chr27:26883257-26883519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
567-725
               

               
Cow position:
               
chr27:25783620-25783469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
570-825
               

               
Cow position:
               
chr27:9977683-9977426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 17
               

               
Conread position:
               
572-743
               

               
Cow position:
               
chr27:30489413-30489586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
572-803
               

               
Cow position:
               
chr27:26323441-26323205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
153, 17
               

               
Conread position:
               
572-812
               

               
Cow position:
               
chr27:6241196-6241438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
573-803
               

               
Cow position:
               
chr27:11993873-11994105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
160, 14
               

               
Conread position:
               
574-812
               

               
Cow position:
               
chr27:16512178-16512413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
575-803
               

               
Cow position:
               
chr27:30455987-30455756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
170, 154
               

               
Conread position:
               
575-827
               

               
Cow position:
               
chr27:20501832-20501575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
576-811
               

               
Cow position:
               
chr27:8790750-8790987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
576-813
               

               
Cow position:
               
chr27:10582363-10582124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
155, 11
               

               
Conread position:
               
576-844
               

               
Cow position:
               
chr27:31169118-31169383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
237, 127
               

               
Conread position:
               
577-797
               

               
Cow position:
               
chr27:22735600-22735825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
577-809
               

               
Cow position:
               
chr27:6319910-6319679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 166
               

               
Conread position:
               
577-827
               

               
Cow position:
               
chr27:20486054-20485784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
578-778
               

               
Cow position:
               
chr27:12710238-12710028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
578-812
               

               
Cow position:
               
chr27:31248627-31248852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
579-820
               

               
Cow position:
               
chr27:7343439-7343682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 128
               

               
Conread position:
               
580-743
               

               
Cow position:
               
chr27:30908661-30908498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
7, 96
               

               
Conread position:
               
580-764
               

               
Cow position:
               
chr27:26090323-26090510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
580-811
               

               
Cow position:
               
chr27:20719276-20719040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
581-782
               

               
Cow position:
               
chr27:6674265-6674052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
145, 9
               

               
Conread position:
               
581-820
               

               
Cow position:
               
chr27:23994433-23994669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
141, 43
               

               
Conread position:
               
581-827
               

               
Cow position:
               
chr27:27740304-27740554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
139, 99
               

               
Conread position:
               
582-858
               

               
Cow position:
               
chr27:18435148-18435427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 6
               

               
Conread position:
               
583-818
               

               
Cow position:
               
chr27:10323822-10323593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
146, 64
               

               
Conread position:
               
583-819
               

               
Cow position:
               
chr27:22245611-22245389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
583-822
               

               
Cow position:
               
chr27:21993732-21993954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
583-822
               

               
Cow position:
               
chr27:29991462-29991715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
583-825
               

               
Cow position:
               
chr27:23863574-23863317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
142, 58
               

               
Conread position:
               
583-843
               

               
Cow position:
               
chr27:788812-789087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
145, 128
               

               
Conread position:
               
586-811
               

               
Cow position:
               
chr27:26565772-26565550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
586-821
               

               
Cow position:
               
chr27:10404134-10404372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
160, 51
               

               
Conread position:
               
586-823
               

               
Cow position:
               
chr27:27055268-27055037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
230, 62
               

               
Conread position:
               
586-827
               

               
Cow position:
               
chr27:26121742-26121493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
586-828
               

               
Cow position:
               
chr27:31170082-31170333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
587-747
               

               
Cow position:
               
chr27:23895401-23895247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
587-821
               

               
Cow position:
               
chr27:26173478-26173239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
590-787
               

               
Cow position:
               
chr27:24709531-24709333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
139, 27
               

               
Conread position:
               
590-809
               

               
Cow position:
               
chr27:15003000-15003222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
590-813
               

               
Cow position:
               
chr27:29319389-29319158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
135, 125
               

               
Conread position:
               
591-742
               

               
Cow position:
               
chr27:14675038-14675188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 113
               

               
Conread position:
               
591-803
               

               
Cow position:
               
chr27:27648335-27648552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
591-812
               

               
Cow position:
               
chr27:15332318-15332536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
78, 131
               

               
Conread position:
               
591-827
               

               
Cow position:
               
chr27:10598966-10598727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
135, 113
               

               
Conread position:
               
592-812
               

               
Cow position:
               
chr27:29388648-29388426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
593-795
               

               
Cow position:
               
chr27:24731064-24731267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 88
               

               
Conread position:
               
594-781
               

               
Cow position:
               
chr27:29603792-29603603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
131, 47
               

               
Conread position:
               
596-811
               

               
Cow position:
               
chr27:29615011-29614797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
596-822
               

               
Cow position:
               
chr27:11323303-11323072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
13, 217
               

               
Conread position:
               
596-822
               

               
Cow position:
               
chr27:22179797-22180022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
597-820
               

               
Cow position:
               
chr27:6106671-6106450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 50
               

               
Conread position:
               
598-827
               

               
Cow position:
               
chr27:30747760-30747543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
133, 55
               

               
Conread position:
               
599-805
               

               
Cow position:
               
chr27:7425219-7425427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
599-812
               

               
Cow position:
               
chr27:24440253-24440463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
118, 183
               

               
Conread position:
               
600-812
               

               
Cow position:
               
chr27:20548780-20548564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
601-812
               

               
Cow position:
               
chr27:6162443-6162649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
601-812
               

               
Cow position:
               
chr27:23957483-23957272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
122, 29
               

               
Conread position:
               
601-816
               

               
Cow position:
               
chr27:23527280-23527064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
126, 57
               

               
Conread position:
               
601-821
               

               
Cow position:
               
chr27:19452969-19452745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
125, 207
               

               
Conread position:
               
602-816
               

               
Cow position:
               
chr27:24693379-24693168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
602-849
               

               
Cow position:
               
chr27:6330610-6330353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
604-740
               

               
Cow position:
               
chr27:11466500-11466636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
5, 112
               

               
Conread position:
               
605-821
               

               
Cow position:
               
chr27:19557349-19557143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
605-827
               

               
Cow position:
               
chr27:28254203-28253975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 74
               

               
Conread position:
               
607-725
               

               
Cow position:
               
chr27:27255949-27255831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
607-805
               

               
Cow position:
               
chr27:17102857-17102661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
607-808
               

               
Cow position:
               
chr27:20770567-20770758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
607-821
               

               
Cow position:
               
chr27:24223913-24223700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
607-838
               

               
Cow position:
               
chr27:3518466-3518228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 98
               

               
Conread position:
               
608-813
               

               
Cow position:
               
chr27:29164730-29164528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
117, 33
               

               
Conread position:
               
608-822
               

               
Cow position:
               
chr27:16246767-16246550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 123
               

               
Conread position:
               
610-762
               

               
Cow position:
               
chr27:26506700-26506547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
610-764
               

               
Cow position:
               
chr27:28541156-28541305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
610-811
               

               
Cow position:
               
chr27:26400763-26400962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
610-811
               

               
Cow position:
               
chr27:30881891-30882104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
610-812
               

               
Cow position:
               
chr27:5462820-5463005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
610-820
               

               
Cow position:
               
chr27:19576365-19576577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
610-821
               

               
Cow position:
               
chr27:27532098-27531868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
611-741
               

               
Cow position:
               
chr27:10443140-10443271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 119
               

               
Conread position:
               
611-883
               

               
Cow position:
               
chr27:19741451-19741704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
200, 107
               

               
Conread position:
               
612-812
               

               
Cow position:
               
chr27:3498506-3498310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
169, 23
               

               
Conread position:
               
612-819
               

               
Cow position:
               
chr27:30797856-30798059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
199, 117
               

               
Conread position:
               
612-821
               

               
Cow position:
               
chr27:13204415-13204210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
613-825
               

               
Cow position:
               
chr27:24240319-24240093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
614-743
               

               
Cow position:
               
chr27:20543674-20543546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
614-745
               

               
Cow position:
               
chr27:17918763-17918897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
614-772
               

               
Cow position:
               
chr27:27747511-27747674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
614-791
               

               
Cow position:
               
chr27:24755942-24755766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
614-808
               

               
Cow position:
               
chr27:18688455-18688654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
104, 91
               

               
Conread position:
               
614-821
               

               
Cow position:
               
chr27:5539741-5539949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
193, 115
               

               
Conread position:
               
614-821
               

               
Cow position:
               
chr27:10581483-10581279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
115, 14
               

               
Conread position:
               
614-825
               

               
Cow position:
               
chr27:14005363-14005152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
162, 11
               

               
Conread position:
               
614-827
               

               
Cow position:
               
chr27:10394906-10394711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
614-837
               

               
Cow position:
               
chr27:4413864-4414087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
615-796
               

               
Cow position:
               
chr27:22254748-22254560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
615-797
               

               
Cow position:
               
chr27:15859344-15859528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
615-810
               

               
Cow position:
               
chr27:22268178-22267975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
615-813
               

               
Cow position:
               
chr27:20241297-20241500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 175
               

               
Conread position:
               
615-821
               

               
Cow position:
               
chr27:26318026-26317809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 174
               

               
Conread position:
               
615-827
               

               
Cow position:
               
chr27:9504504-9504294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
114, 16
               

               
Conread position:
               
615-827
               

               
Cow position:
               
chr27:11134039-11133826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 40
               

               
Conread position:
               
617-742
               

               
Cow position:
               
chr27:23504010-23504136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
617-800
               

               
Cow position:
               
chr27:232505-232317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
617-808
               

               
Cow position:
               
chr27:20484681-20484491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
617-810
               

               
Cow position:
               
chr27:12284945-12284750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
617-821
               

               
Cow position:
               
chr27:28015784-28015989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
109, 34
               

               
Conread position:
               
617-822
               

               
Cow position:
               
chr27:22792783-22792579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
119, 102
               

               
Conread position:
               
617-824
               

               
Cow position:
               
chr27:29308294-29308087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
617-825
               

               
Cow position:
               
chr27:1184226-1184434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
184, 166
               

               
Conread position:
               
617-826
               

               
Cow position:
               
chr27:27827900-27828114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 12
               

               
Conread position:
               
617-831
               

               
Cow position:
               
chr27:26236277-26236066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
112, 62
               

               
Conread position:
               
618-808
               

               
Cow position:
               
chr27:18791559-18791756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
619-811
               

               
Cow position:
               
chr27:11507314-11507509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
97, 82
               

               
Conread position:
               
620-810
               

               
Cow position:
               
chr27:24356986-24356795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 175
               

               
Conread position:
               
620-828
               

               
Cow position:
               
chr27:2949379-2949578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
620-894
               

               
Cow position:
               
chr27:9697601-9697325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
115, 128
               

               
Conread position:
               
621-822
               

               
Cow position:
               
chr27:16047551-16047743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 97
               

               
Conread position:
               
621-827
               

               
Cow position:
               
chr27:4398544-4398746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
622-800
               

               
Cow position:
               
chr27:26909645-26909822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
622-807
               

               
Cow position:
               
chr27:20325090-20324898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
622-822
               

               
Cow position:
               
chr27:21677478-21677687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
622-822
               

               
Cow position:
               
chr27:30884974-30884772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
103, 175
               

               
Conread position:
               
623-808
               

               
Cow position:
               
chr27:20325296-20325115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
623-812
               

               
Cow position:
               
chr27:26118445-26118251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
624-811
               

               
Cow position:
               
chr27:21025630-21025453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
624-814
               

               
Cow position:
               
chr27:20048578-20048389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
624-826
               

               
Cow position:
               
chr27:18752800-18752585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 57
               

               
Conread position:
               
624-830
               

               
Cow position:
               
chr27:27528876-27529078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
625-809
               

               
Cow position:
               
chr27:14443557-14443377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
625-822
               

               
Cow position:
               
chr27:31498725-31498527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 7
               

               
Conread position:
               
625-827
               

               
Cow position:
               
chr27:1067511-1067315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
625-834
               

               
Cow position:
               
chr27:6679431-6679647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
120, 80
               

               
Conread position:
               
625-872
               

               
Cow position:
               
chr27:31157755-31157500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
104, 82
               

               
Conread position:
               
626-772
               

               
Cow position:
               
chr27:14169341-14169195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
99, 7
               

               
Conread position:
               
626-778
               

               
Cow position:
               
chr27:18912581-18912733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
626-821
               

               
Cow position:
               
chr27:262282-262081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
626-826
               

               
Cow position:
               
chr27:18491498-18491305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
102, 89
               

               
Conread position:
               
627-776
               

               
Cow position:
               
chr27:16336834-16336679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
627-824
               

               
Cow position:
               
chr27:24035333-24035536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
628-742
               

               
Cow position:
               
chr27:6522757-6522641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
628-812
               

               
Cow position:
               
chr27:24755544-24755365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
628-822
               

               
Cow position:
               
chr27:29249532-29249328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
113, 137
               

               
Conread position:
               
629-824
               

               
Cow position:
               
chr27:5781027-5780845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
182, 92
               

               
Conread position:
               
630-823
               

               
Cow position:
               
chr27:26980022-26980222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
631-797
               

               
Cow position:
               
chr27:30996891-30997060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 76
               

               
Conread position:
               
631-810
               

               
Cow position:
               
chr27:20266288-20266470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 98
               

               
Conread position:
               
631-820
               

               
Cow position:
               
chr27:11208617-11208812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
631-825
               

               
Cow position:
               
chr27:20081192-20081393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
95, 11
               

               
Conread position:
               
632-809
               

               
Cow position:
               
chr27:9956495-9956677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
632-818
               

               
Cow position:
               
chr27:29892661-29892469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
632-821
               

               
Cow position:
               
chr27:11349214-11349030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
632-822
               

               
Cow position:
               
chr27:31515613-31515809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 101
               

               
Conread position:
               
632-830
               

               
Cow position:
               
chr27:4544412-4544615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 73
               

               
Conread position:
               
633-791
               

               
Cow position:
               
chr27:23060178-23060341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
633-811
               

               
Cow position:
               
chr27:21202128-21201945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
633-821
               

               
Cow position:
               
chr27:17908324-17908510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
633-821
               

               
Cow position:
               
chr27:22497957-22497774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 94
               

               
Conread position:
               
634-812
               

               
Cow position:
               
chr27:21951044-21951226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
636-819
               

               
Cow position:
               
chr27:21143135-21143330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
637-759
               

               
Cow position:
               
chr27:23495778-23495902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
637-797
               

               
Cow position:
               
chr27:23177381-23177543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
637-812
               

               
Cow position:
               
chr27:27606365-27606540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 144
               

               
Conread position:
               
637-830
               

               
Cow position:
               
chr27:23232847-23232650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
73, 176
               

               
Conread position:
               
639-797
               

               
Cow position:
               
chr27:641116-641268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
639-811
               

               
Cow position:
               
chr27:31183505-31183328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 160
               

               
Conread position:
               
639-825
               

               
Cow position:
               
chr27:30444751-30444932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
639-827
               

               
Cow position:
               
chr27:22748257-22748065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
640-812
               

               
Cow position:
               
chr27:28062271-28062440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
640-815
               

               
Cow position:
               
chr27:11145807-11145633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
640-825
               

               
Cow position:
               
chr27:31153629-31153814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 141
               

               
Conread position:
               
640-828
               

               
Cow position:
               
chr27:27449957-27450143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 95
               

               
Conread position:
               
640-831
               

               
Cow position:
               
chr27:23070022-23069836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
171, 46
               

               
Conread position:
               
641-800
               

               
Cow position:
               
chr27:31031382-31031233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
641-808
               

               
Cow position:
               
chr27:29183289-29183468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
641-814
               

               
Cow position:
               
chr27:23100721-23100891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
164, 77
               

               
Conread position:
               
642-813
               

               
Cow position:
               
chr27:25790223-25790056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
642-821
               

               
Cow position:
               
chr27:29877547-29877731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
643-820
               

               
Cow position:
               
chr27:18873973-18873799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
643-846
               

               
Cow position:
               
chr27:178788-178584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
85, 193
               

               
Conread position:
               
644-812
               

               
Cow position:
               
chr27:11528855-11528683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
644-817
               

               
Cow position:
               
chr27:28476189-28476359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
644-821
               

               
Cow position:
               
chr27:24358257-24358083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
167, 38
               

               
Conread position:
               
644-825
               

               
Cow position:
               
chr27:26154247-26154055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
644-853
               

               
Cow position:
               
chr27:20490455-20490238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 172
               

               
Conread position:
               
645-798
               

               
Cow position:
               
chr27:23477869-23477716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
84, 59
               

               
Conread position:
               
647-812
               

               
Cow position:
               
chr27:22102722-22102887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
647-822
               

               
Cow position:
               
chr27:29961661-29961830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
648-809
               

               
Cow position:
               
chr27:25382231-25382380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
648-810
               

               
Cow position:
               
chr27:2036640-2036482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
648-818
               

               
Cow position:
               
chr27:26984082-26983911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
648-822
               

               
Cow position:
               
chr27:15434245-15434076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
77, 115
               

               
Conread position:
               
648-822
               

               
Cow position:
               
chr27:21419270-21419440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
154, 73
               

               
Conread position:
               
648-827
               

               
Cow position:
               
chr27:22583667-22583482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
648-829
               

               
Cow position:
               
chr27:20612444-20612258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
648-831
               

               
Cow position:
               
chr27:26245623-26245815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
649-795
               

               
Cow position:
               
chr27:26504224-26504075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
649-822
               

               
Cow position:
               
chr27:29246228-29246404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
77, 130
               

               
Conread position:
               
649-825
               

               
Cow position:
               
chr27:16513938-16514108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 90
               

               
Conread position:
               
651-821
               

               
Cow position:
               
chr27:19074105-19074281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
651-821
               

               
Cow position:
               
chr27:19779794-19779623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
71, 137
               

               
Conread position:
               
651-822
               

               
Cow position:
               
chr27:25000043-25000223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
651-837
               

               
Cow position:
               
chr27:21661053-21660866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
70, 175
               

               
Conread position:
               
651-877
               

               
Cow position:
               
chr27:22213074-22212861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
160, 7
               

               
Conread position:
               
652-822
               

               
Cow position:
               
chr27:4195463-4195299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
656-809
               

               
Cow position:
               
chr27:23760069-23760221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
656-825
               

               
Cow position:
               
chr27:19805784-19805954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
657-865
               

               
Cow position:
               
chr27:16504999-16505204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
191, 72
               

               
Conread position:
               
661-809
               

               
Cow position:
               
chr27:20561489-20561345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
661-812
               

               
Cow position:
               
chr27:26314216-26314371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
661-813
               

               
Cow position:
               
chr27:21101383-21101539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
661-821
               

               
Cow position:
               
chr27:26939984-26939822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
661-822
               

               
Cow position:
               
chr27:3698765-3698929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
84, 71
               

               
Conread position:
               
662-825
               

               
Cow position:
               
chr27:4486871-4487040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
663-772
               

               
Cow position:
               
chr27:7847623-7847511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
663-812
               

               
Cow position:
               
chr27:22150789-22150939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
663-822
               

               
Cow position:
               
chr27:21054365-21054201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
664-789
               

               
Cow position:
               
chr27:624314-624439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
664-812
               

               
Cow position:
               
chr27:18215260-18215405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 44
               

               
Conread position:
               
665-809
               

               
Cow position:
               
chr27:21447926-21448065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
665-830
               

               
Cow position:
               
chr27:1778952-1779113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
665-835
               

               
Cow position:
               
chr27:27012602-27012422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
666-822
               

               
Cow position:
               
chr27:2934406-2934252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
666-834
               

               
Cow position:
               
chr27:19992051-19991879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
667-821
               

               
Cow position:
               
chr27:28192714-28192867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
108, 62
               

               
Conread position:
               
668-811
               

               
Cow position:
               
chr27:30441605-30441457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
668-851
               

               
Cow position:
               
chr27:26467658-26467843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 144
               

               
Conread position:
               
669-813
               

               
Cow position:
               
chr27:7538393-7538538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 113
               

               
Conread position:
               
669-822
               

               
Cow position:
               
chr27:20825891-20826053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
670-862
               

               
Cow position:
               
chr27:29399502-29399321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
673-825
               

               
Cow position:
               
chr27:23527606-23527755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
673-827
               

               
Cow position:
               
chr27:22614756-22614594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
673-830
               

               
Cow position:
               
chr27:5227427-5227578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
674-828
               

               
Cow position:
               
chr27:24952060-24952214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 100
               

               
Conread position:
               
675-822
               

               
Cow position:
               
chr27:6392610-6392473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
678-808
               

               
Cow position:
               
chr27:20302457-20302334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
680-821
               

               
Cow position:
               
chr27:6752069-6751921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
684-812
               

               
Cow position:
               
chr27:10867780-10867904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
691-832
               

               
Cow position:
               
chr27:29056184-29056045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
692-812
               

               
Cow position:
               
chr27:1193430-1193549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
695-813
               

               
Cow position:
               
chr27:21570509-21570624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
704-811
               

               
Cow position:
               
chr27:26315277-26315385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
707-822
               

               
Cow position:
               
chr27:15697443-15697331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
710-829
               

               
Cow position:
               
chr27:14675317-14675439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 19
               

               
Conread position:
               
716-822
               

               
Cow position:
               
chr27:6015022-6014915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               
Show alignments to all cow chromosomes.