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Cow genome map

           
Conread name:
           
Ss1.1-rret24_n12.5
        

               
Conread position:
               
453-740
               

               
Cow position:
               
chr29:13867364-13867084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
453-828
               

               
Cow position:
               
chr29:30227435-30227060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 112
               

               
Conread position:
               
476-821
               

               
Cow position:
               
chr29:3584243-3583907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
482-743
               

               
Cow position:
               
chr29:26559367-26559116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
482-821
               

               
Cow position:
               
chr29:13028310-13028660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 31
               

               
Conread position:
               
484-775
               

               
Cow position:
               
chr29:32290483-32290769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
99, 6
               

               
Conread position:
               
484-816
               

               
Cow position:
               
chr29:35084348-35084017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 72
               

               
Conread position:
               
485-734
               

               
Cow position:
               
chr29:4334603-4334838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
485-811
               

               
Cow position:
               
chr29:3825848-3826166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
487-779
               

               
Cow position:
               
chr29:24429968-24429669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
488-747
               

               
Cow position:
               
chr29:11705002-11705245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
490-810
               

               
Cow position:
               
chr29:5063028-5063342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
493-680
               

               
Cow position:
               
chr29:2071690-2071505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
493-715
               

               
Cow position:
               
chr29:5098877-5098665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
493-812
               

               
Cow position:
               
chr29:43099862-43099547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
90, 25
               

               
Conread position:
               
493-813
               

               
Cow position:
               
chr29:11562498-11562828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
86, 50
               

               
Conread position:
               
493-817
               

               
Cow position:
               
chr29:26673023-26672693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
494-798
               

               
Cow position:
               
chr29:24045877-24046185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
84, 62
               

               
Conread position:
               
495-632
               

               
Cow position:
               
chr29:18580130-18579992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
495-688
               

               
Cow position:
               
chr29:24103660-24103467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 67
               

               
Conread position:
               
495-698
               

               
Cow position:
               
chr29:44682212-44682019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
201, 24
               

               
Conread position:
               
495-715
               

               
Cow position:
               
chr29:28868521-28868744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
96, 56
               

               
Conread position:
               
495-719
               

               
Cow position:
               
chr29:26615837-26615612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
495-723
               

               
Cow position:
               
chr29:43009197-43008975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
495-725
               

               
Cow position:
               
chr29:17607305-17607527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
495-725
               

               
Cow position:
               
chr29:29176730-29176506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
495-734
               

               
Cow position:
               
chr29:36217002-36217233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
232, 62
               

               
Conread position:
               
495-739
               

               
Cow position:
               
chr29:39329709-39329479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
495-740
               

               
Cow position:
               
chr29:10156420-10156179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
495-740
               

               
Cow position:
               
chr29:27588808-27589050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
495-741
               

               
Cow position:
               
chr29:29314770-29314518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
495-743
               

               
Cow position:
               
chr29:19338872-19339131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
495-743
               

               
Cow position:
               
chr29:23243995-23243750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
495-743
               

               
Cow position:
               
chr29:32211171-32210939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
230, 48
               

               
Conread position:
               
495-744
               

               
Cow position:
               
chr29:40166131-40166380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 47
               

               
Conread position:
               
495-755
               

               
Cow position:
               
chr29:1556817-1557073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
495-762
               

               
Cow position:
               
chr29:28166328-28166073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
495-773
               

               
Cow position:
               
chr29:29974929-29975201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
226, 8
               

               
Conread position:
               
495-777
               

               
Cow position:
               
chr29:45589704-45589434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
92, 49
               

               
Conread position:
               
495-792
               

               
Cow position:
               
chr29:27826411-27826686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
495-798
               

               
Cow position:
               
chr29:34359095-34358792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
495-807
               

               
Cow position:
               
chr29:22714839-22714514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
495-808
               

               
Cow position:
               
chr29:43328525-43328829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
77, 93
               

               
Conread position:
               
495-809
               

               
Cow position:
               
chr29:31674515-31674829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
90, 48
               

               
Conread position:
               
495-811
               

               
Cow position:
               
chr29:28197120-28196820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
495-812
               

               
Cow position:
               
chr29:4480287-4479966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
495-812
               

               
Cow position:
               
chr29:4520220-4520531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
495-812
               

               
Cow position:
               
chr29:25737533-25737219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 250
               

               
Conread position:
               
495-816
               

               
Cow position:
               
chr29:34745776-34745456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 61
               

               
Conread position:
               
495-818
               

               
Cow position:
               
chr29:732503-732817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
495-820
               

               
Cow position:
               
chr29:22613311-22613630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
495-820
               

               
Cow position:
               
chr29:25091997-25092314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
495-820
               

               
Cow position:
               
chr29:26275497-26275811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
320, 51
               

               
Conread position:
               
495-821
               

               
Cow position:
               
chr29:10838835-10839150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
243, 58
               

               
Conread position:
               
495-822
               

               
Cow position:
               
chr29:35501766-35501453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 47
               

               
Conread position:
               
495-825
               

               
Cow position:
               
chr29:31594245-31593942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
311, 44
               

               
Conread position:
               
495-827
               

               
Cow position:
               
chr29:4875008-4874673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
495-827
               

               
Cow position:
               
chr29:9709581-9709910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
495-828
               

               
Cow position:
               
chr29:12680043-12680373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 58
               

               
Conread position:
               
495-829
               

               
Cow position:
               
chr29:17109853-17110171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 47
               

               
Conread position:
               
495-830
               

               
Cow position:
               
chr29:34773849-34773530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
495-831
               

               
Cow position:
               
chr29:22162368-22162045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
495-833
               

               
Cow position:
               
chr29:36530752-36531092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
495-840
               

               
Cow position:
               
chr29:10058651-10058312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
496-738
               

               
Cow position:
               
chr29:17409221-17409458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
496-743
               

               
Cow position:
               
chr29:750018-749777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 23
               

               
Conread position:
               
496-791
               

               
Cow position:
               
chr29:38581862-38582150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
233, 61
               

               
Conread position:
               
496-822
               

               
Cow position:
               
chr29:5409254-5408930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
498-642
               

               
Cow position:
               
chr29:39643065-39643204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
498-659
               

               
Cow position:
               
chr29:1124543-1124700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
498-669
               

               
Cow position:
               
chr29:43956781-43956947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
146, 65
               

               
Conread position:
               
498-698
               

               
Cow position:
               
chr29:868663-868859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
498-702
               

               
Cow position:
               
chr29:26330097-26330286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
498-702
               

               
Cow position:
               
chr29:41365000-41365197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
498-714
               

               
Cow position:
               
chr29:2984776-2984990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
498-726
               

               
Cow position:
               
chr29:6217660-6217433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 58
               

               
Conread position:
               
498-732
               

               
Cow position:
               
chr29:20903397-20903171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
498-733
               

               
Cow position:
               
chr29:15940746-15940506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
498-735
               

               
Cow position:
               
chr29:6293586-6293359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
498-736
               

               
Cow position:
               
chr29:43251280-43251040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
93, 58
               

               
Conread position:
               
498-740
               

               
Cow position:
               
chr29:24252126-24252362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
498-740
               

               
Cow position:
               
chr29:25333574-25333334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 44
               

               
Conread position:
               
498-742
               

               
Cow position:
               
chr29:4194229-4194001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
498-742
               

               
Cow position:
               
chr29:6844740-6844503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
498-743
               

               
Cow position:
               
chr29:40096852-40097092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
83, 22
               

               
Conread position:
               
498-744
               

               
Cow position:
               
chr29:26654148-26653914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
130, 42
               

               
Conread position:
               
498-752
               

               
Cow position:
               
chr29:11053971-11053723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
498-759
               

               
Cow position:
               
chr29:7966139-7966393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
112, 21
               

               
Conread position:
               
498-767
               

               
Cow position:
               
chr29:8176539-8176813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
223, 0
               

               
Conread position:
               
498-770
               

               
Cow position:
               
chr29:42771539-42771791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
235, 21
               

               
Conread position:
               
498-777
               

               
Cow position:
               
chr29:21443453-21443170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
498-778
               

               
Cow position:
               
chr29:3100369-3100098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
223, 56
               

               
Conread position:
               
498-778
               

               
Cow position:
               
chr29:13639482-13639197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
498-778
               

               
Cow position:
               
chr29:29795497-29795213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
498-790
               

               
Cow position:
               
chr29:19389375-19389659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
117, 56
               

               
Conread position:
               
498-791
               

               
Cow position:
               
chr29:19253932-19253649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
223, 56
               

               
Conread position:
               
498-805
               

               
Cow position:
               
chr29:6925900-6926175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
498-808
               

               
Cow position:
               
chr29:12784068-12783758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
221, 58
               

               
Conread position:
               
498-808
               

               
Cow position:
               
chr29:37599319-37599045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
111, 50
               

               
Conread position:
               
498-808
               

               
Cow position:
               
chr29:40117456-40117762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
498-809
               

               
Cow position:
               
chr29:28195625-28195335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
498-810
               

               
Cow position:
               
chr29:22778289-22777982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
498-810
               

               
Cow position:
               
chr29:28979593-28979317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr29:363148-363449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
223, 58
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr29:699728-699428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr29:2744384-2744069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
88, 61
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr29:10018465-10018768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr29:14501485-14501795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr29:29942842-29942526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr29:35677659-35677341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr29:36220416-36220743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
498-811
               

               
Cow position:
               
chr29:41530735-41531051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
498-812
               

               
Cow position:
               
chr29:6337549-6337851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
498-813
               

               
Cow position:
               
chr29:40891808-40891505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
93, 57
               

               
Conread position:
               
498-814
               

               
Cow position:
               
chr29:20910806-20910487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
498-814
               

               
Cow position:
               
chr29:28775569-28775263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
86, 45
               

               
Conread position:
               
498-816
               

               
Cow position:
               
chr29:17297022-17297343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
498-817
               

               
Cow position:
               
chr29:1022183-1022501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
498-818
               

               
Cow position:
               
chr29:18878608-18878275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
51, 296
               

               
Conread position:
               
498-819
               

               
Cow position:
               
chr29:24624138-24624449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
498-819
               

               
Cow position:
               
chr29:29769463-29769146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 58
               

               
Conread position:
               
498-820
               

               
Cow position:
               
chr29:23697867-23698181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 47
               

               
Conread position:
               
498-820
               

               
Cow position:
               
chr29:31926401-31926107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
498-821
               

               
Cow position:
               
chr29:39111427-39111114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
498-822
               

               
Cow position:
               
chr29:16657578-16657904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 63
               

               
Conread position:
               
498-822
               

               
Cow position:
               
chr29:25268011-25268350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 215
               

               
Conread position:
               
498-824
               

               
Cow position:
               
chr29:4120736-4121065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
80, 58
               

               
Conread position:
               
498-826
               

               
Cow position:
               
chr29:11398036-11397699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
94, 58
               

               
Conread position:
               
498-827
               

               
Cow position:
               
chr29:30440819-30441155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
498-828
               

               
Cow position:
               
chr29:45005737-45005416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
498-830
               

               
Cow position:
               
chr29:32799820-32799483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 58
               

               
Conread position:
               
498-831
               

               
Cow position:
               
chr29:20626464-20626788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
225, 62
               

               
Conread position:
               
498-862
               

               
Cow position:
               
chr29:8669255-8669606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
83, 22
               

               
Conread position:
               
499-671
               

               
Cow position:
               
chr29:17301418-17301591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
499-716
               

               
Cow position:
               
chr29:27329781-27329994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
499-719
               

               
Cow position:
               
chr29:28446367-28446151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 120
               

               
Conread position:
               
499-810
               

               
Cow position:
               
chr29:1325329-1325645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 88
               

               
Conread position:
               
499-811
               

               
Cow position:
               
chr29:29551741-29552047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
499-812
               

               
Cow position:
               
chr29:4085210-4085497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
499-812
               

               
Cow position:
               
chr29:19762165-19762464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
499-824
               

               
Cow position:
               
chr29:42364125-42363806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
162, 60
               

               
Conread position:
               
499-829
               

               
Cow position:
               
chr29:5892737-5893064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
499-864
               

               
Cow position:
               
chr29:17154656-17155011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
500-711
               

               
Cow position:
               
chr29:23984068-23983858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
500-811
               

               
Cow position:
               
chr29:1614815-1615127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
500-821
               

               
Cow position:
               
chr29:5046542-5046862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 56
               

               
Conread position:
               
501-682
               

               
Cow position:
               
chr29:9139304-9139489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 147
               

               
Conread position:
               
501-688
               

               
Cow position:
               
chr29:17668386-17668561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
501-725
               

               
Cow position:
               
chr29:22936161-22936382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
81, 55
               

               
Conread position:
               
501-727
               

               
Cow position:
               
chr29:4444606-4444832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
87, 9
               

               
Conread position:
               
501-727
               

               
Cow position:
               
chr29:37961087-37960862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
501-728
               

               
Cow position:
               
chr29:9912063-9912289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
501-735
               

               
Cow position:
               
chr29:39567578-39567802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
82, 55
               

               
Conread position:
               
501-737
               

               
Cow position:
               
chr29:847750-847518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
501-739
               

               
Cow position:
               
chr29:6286267-6286035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
226, 53
               

               
Conread position:
               
501-741
               

               
Cow position:
               
chr29:18404222-18403991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
501-743
               

               
Cow position:
               
chr29:21941490-21941729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
501-743
               

               
Cow position:
               
chr29:22175578-22175810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
237, 55
               

               
Conread position:
               
501-743
               

               
Cow position:
               
chr29:25088644-25088870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
501-744
               

               
Cow position:
               
chr29:19821178-19821413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
501-749
               

               
Cow position:
               
chr29:4367612-4367863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 57
               

               
Conread position:
               
501-800
               

               
Cow position:
               
chr29:18462664-18462365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
501-805
               

               
Cow position:
               
chr29:24952579-24952881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 60
               

               
Conread position:
               
501-809
               

               
Cow position:
               
chr29:38440134-38440455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
501-809
               

               
Cow position:
               
chr29:40994999-40994681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
501-810
               

               
Cow position:
               
chr29:2055949-2056259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
501-811
               

               
Cow position:
               
chr29:13127232-13126926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
501-811
               

               
Cow position:
               
chr29:35291981-35292286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
501-811
               

               
Cow position:
               
chr29:37618197-37618508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
72, 41
               

               
Conread position:
               
501-812
               

               
Cow position:
               
chr29:7310579-7310864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
501-812
               

               
Cow position:
               
chr29:11434014-11434313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
501-812
               

               
Cow position:
               
chr29:26259368-26259678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
112, 55
               

               
Conread position:
               
501-813
               

               
Cow position:
               
chr29:10653236-10653524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
501-816
               

               
Cow position:
               
chr29:29057074-29057385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
501-818
               

               
Cow position:
               
chr29:44378524-44378200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
501-822
               

               
Cow position:
               
chr29:11611730-11612060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
501-822
               

               
Cow position:
               
chr29:16309633-16309932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
501-822
               

               
Cow position:
               
chr29:24292762-24293082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
501-822
               

               
Cow position:
               
chr29:35405901-35405579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
501-824
               

               
Cow position:
               
chr29:12025579-12025266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
501-824
               

               
Cow position:
               
chr29:26334495-26334173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
501-826
               

               
Cow position:
               
chr29:29475361-29475036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
191, 25
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr29:1007707-1008035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
501-827
               

               
Cow position:
               
chr29:32963447-32963739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
501-828
               

               
Cow position:
               
chr29:27816246-27816552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
501-831
               

               
Cow position:
               
chr29:22690115-22690444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
501-835
               

               
Cow position:
               
chr29:17222304-17222640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 55
               

               
Conread position:
               
501-849
               

               
Cow position:
               
chr29:22068855-22068501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 53
               

               
Conread position:
               
501-853
               

               
Cow position:
               
chr29:27858685-27859027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
88, 42
               

               
Conread position:
               
501-869
               

               
Cow position:
               
chr29:1395487-1395830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
502-775
               

               
Cow position:
               
chr29:9718877-9718611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
502-776
               

               
Cow position:
               
chr29:87124-86839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
502-810
               

               
Cow position:
               
chr29:26017610-26017301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
502-827
               

               
Cow position:
               
chr29:5831144-5830798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 71
               

               
Conread position:
               
502-827
               

               
Cow position:
               
chr29:11915712-11916037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
502-827
               

               
Cow position:
               
chr29:36210053-36210367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
205, 27
               

               
Conread position:
               
503-680
               

               
Cow position:
               
chr29:36183174-36183347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
503-692
               

               
Cow position:
               
chr29:36427511-36427335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
112, 54
               

               
Conread position:
               
503-717
               

               
Cow position:
               
chr29:12626086-12625873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
75, 56
               

               
Conread position:
               
503-734
               

               
Cow position:
               
chr29:6015015-6015246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
503-740
               

               
Cow position:
               
chr29:13634409-13634173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
503-743
               

               
Cow position:
               
chr29:40299116-40298888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
222, 10
               

               
Conread position:
               
503-746
               

               
Cow position:
               
chr29:40959954-40959717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
503-789
               

               
Cow position:
               
chr29:17168298-17168583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
503-809
               

               
Cow position:
               
chr29:5520612-5520286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
503-811
               

               
Cow position:
               
chr29:16272621-16272944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
503-811
               

               
Cow position:
               
chr29:28674814-28674502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
503-811
               

               
Cow position:
               
chr29:34297678-34297371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
503-811
               

               
Cow position:
               
chr29:38580870-38581192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
503-816
               

               
Cow position:
               
chr29:26477432-26477749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 56
               

               
Conread position:
               
503-821
               

               
Cow position:
               
chr29:31489214-31489534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 51
               

               
Conread position:
               
503-822
               

               
Cow position:
               
chr29:8862585-8862289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
503-824
               

               
Cow position:
               
chr29:21196758-21196439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
503-827
               

               
Cow position:
               
chr29:16609635-16609970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
76, 50
               

               
Conread position:
               
503-827
               

               
Cow position:
               
chr29:23389663-23389351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
79, 53
               

               
Conread position:
               
503-830
               

               
Cow position:
               
chr29:27668770-27668436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
79, 56
               

               
Conread position:
               
504-809
               

               
Cow position:
               
chr29:3685618-3685323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
504-813
               

               
Cow position:
               
chr29:26778774-26779079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
504-818
               

               
Cow position:
               
chr29:4418717-4419034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
504-821
               

               
Cow position:
               
chr29:14112270-14112591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
505-812
               

               
Cow position:
               
chr29:8926568-8926249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
66, 37
               

               
Conread position:
               
505-823
               

               
Cow position:
               
chr29:24035507-24035196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
505-832
               

               
Cow position:
               
chr29:28739519-28739850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
506-724
               

               
Cow position:
               
chr29:5186600-5186383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
506-820
               

               
Cow position:
               
chr29:28814083-28813762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 53
               

               
Conread position:
               
507-716
               

               
Cow position:
               
chr29:24578755-24578965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
507-748
               

               
Cow position:
               
chr29:29512244-29512002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
507-811
               

               
Cow position:
               
chr29:35458881-35458569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
46, 158
               

               
Conread position:
               
507-812
               

               
Cow position:
               
chr29:19428556-19428851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
507-824
               

               
Cow position:
               
chr29:14838912-14838596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
508-652
               

               
Cow position:
               
chr29:12004863-12004724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
508-728
               

               
Cow position:
               
chr29:10235235-10235024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
70, 53
               

               
Conread position:
               
508-757
               

               
Cow position:
               
chr29:32925997-32926245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
508-764
               

               
Cow position:
               
chr29:13373198-13373453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
508-809
               

               
Cow position:
               
chr29:707053-706777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
508-811
               

               
Cow position:
               
chr29:4625099-4624798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
508-811
               

               
Cow position:
               
chr29:25814938-25814635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
508-821
               

               
Cow position:
               
chr29:7956088-7955778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
213, 51
               

               
Conread position:
               
509-820
               

               
Cow position:
               
chr29:20167321-20167632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
511-740
               

               
Cow position:
               
chr29:13372566-13372788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
511-812
               

               
Cow position:
               
chr29:40583694-40583986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
511-838
               

               
Cow position:
               
chr29:31928882-31929213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 162
               

               
Conread position:
               
511-877
               

               
Cow position:
               
chr29:20243908-20243542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
512-820
               

               
Cow position:
               
chr29:8293014-8292704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
162, 48
               

               
Conread position:
               
513-722
               

               
Cow position:
               
chr29:27873507-27873709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
513-822
               

               
Cow position:
               
chr29:29189188-29188887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
128, 22
               

               
Conread position:
               
514-743
               

               
Cow position:
               
chr29:31813852-31814069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
197, 40
               

               
Conread position:
               
514-819
               

               
Cow position:
               
chr29:20924807-20925116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
515-722
               

               
Cow position:
               
chr29:1229513-1229715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
516-812
               

               
Cow position:
               
chr29:22721279-22721554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
517-818
               

               
Cow position:
               
chr29:21665994-21666293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
518-828
               

               
Cow position:
               
chr29:22519223-22518903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
519-824
               

               
Cow position:
               
chr29:28993769-28994070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
520-780
               

               
Cow position:
               
chr29:30713799-30713548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
64, 36
               

               
Conread position:
               
520-789
               

               
Cow position:
               
chr29:44236361-44236620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
520-802
               

               
Cow position:
               
chr29:2263087-2262790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
520-811
               

               
Cow position:
               
chr29:23874369-23874662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
521-812
               

               
Cow position:
               
chr29:7624087-7624366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
522-678
               

               
Cow position:
               
chr29:13486861-13487015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
522-725
               

               
Cow position:
               
chr29:694089-693898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
522-742
               

               
Cow position:
               
chr29:18085482-18085703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
198, 8
               

               
Conread position:
               
522-811
               

               
Cow position:
               
chr29:23844742-23845040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
523-762
               

               
Cow position:
               
chr29:31891616-31891385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
113, 38
               

               
Conread position:
               
524-724
               

               
Cow position:
               
chr29:26416265-26416460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
524-821
               

               
Cow position:
               
chr29:32894182-32894472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 32
               

               
Conread position:
               
524-827
               

               
Cow position:
               
chr29:19949215-19949522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 129
               

               
Conread position:
               
525-820
               

               
Cow position:
               
chr29:2623567-2623271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
525-822
               

               
Cow position:
               
chr29:20770258-20770555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
526-723
               

               
Cow position:
               
chr29:463742-463543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 30
               

               
Conread position:
               
526-727
               

               
Cow position:
               
chr29:356235-356435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
526-728
               

               
Cow position:
               
chr29:42886466-42886657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
526-740
               

               
Cow position:
               
chr29:11647005-11647219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
526-820
               

               
Cow position:
               
chr29:29183634-29183934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
527-803
               

               
Cow position:
               
chr29:7124732-7125014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
527-807
               

               
Cow position:
               
chr29:6755915-6756180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
530-725
               

               
Cow position:
               
chr29:8005003-8004816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
531-810
               

               
Cow position:
               
chr29:19250269-19250542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
155, 24
               

               
Conread position:
               
532-816
               

               
Cow position:
               
chr29:36952378-36952107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
532-862
               

               
Cow position:
               
chr29:21645246-21645570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
195, 29
               

               
Conread position:
               
535-742
               

               
Cow position:
               
chr29:7103480-7103687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
43, 24
               

               
Conread position:
               
542-815
               

               
Cow position:
               
chr29:31943792-31944070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
543-811
               

               
Cow position:
               
chr29:32733224-32733502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
10, 29
               

               
Conread position:
               
544-804
               

               
Cow position:
               
chr29:43183380-43183125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
178, 29
               

               
Conread position:
               
546-809
               

               
Cow position:
               
chr29:31092384-31092647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
546-812
               

               
Cow position:
               
chr29:17236367-17236623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
547-821
               

               
Cow position:
               
chr29:31651345-31651612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 23
               

               
Conread position:
               
549-811
               

               
Cow position:
               
chr29:42630056-42630317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 154
               

               
Conread position:
               
549-861
               

               
Cow position:
               
chr29:15947101-15947423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
550-812
               

               
Cow position:
               
chr29:5995165-5994888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
31, 126
               

               
Conread position:
               
551-695
               

               
Cow position:
               
chr29:36830296-36830439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
551-725
               

               
Cow position:
               
chr29:41811651-41811479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
551-726
               

               
Cow position:
               
chr29:16195779-16195952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
551-727
               

               
Cow position:
               
chr29:4691456-4691274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
551-740
               

               
Cow position:
               
chr29:5210423-5210616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 114
               

               
Conread position:
               
551-743
               

               
Cow position:
               
chr29:12309946-12310136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
551-743
               

               
Cow position:
               
chr29:40852865-40853056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
551-772
               

               
Cow position:
               
chr29:109634-109841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
551-787
               

               
Cow position:
               
chr29:40633583-40633829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
149, 24
               

               
Conread position:
               
551-791
               

               
Cow position:
               
chr29:36632925-36632680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
551-810
               

               
Cow position:
               
chr29:27911528-27911791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
551-810
               

               
Cow position:
               
chr29:27926711-27926973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 88
               

               
Conread position:
               
551-819
               

               
Cow position:
               
chr29:1011637-1011385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 24
               

               
Conread position:
               
551-822
               

               
Cow position:
               
chr29:18450198-18449926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
551-824
               

               
Cow position:
               
chr29:23813101-23812832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
163, 24
               

               
Conread position:
               
551-827
               

               
Cow position:
               
chr29:23825605-23825878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
33, 183
               

               
Conread position:
               
551-831
               

               
Cow position:
               
chr29:38348094-38347808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
552-776
               

               
Cow position:
               
chr29:32176617-32176833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
552-795
               

               
Cow position:
               
chr29:30548711-30548957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
33, 234
               

               
Conread position:
               
552-797
               

               
Cow position:
               
chr29:29324476-29324234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 20
               

               
Conread position:
               
552-810
               

               
Cow position:
               
chr29:38396301-38396563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
552-810
               

               
Cow position:
               
chr29:44139308-44139046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 128
               

               
Conread position:
               
552-812
               

               
Cow position:
               
chr29:501137-501401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
552-821
               

               
Cow position:
               
chr29:23220564-23220278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
552-822
               

               
Cow position:
               
chr29:38980133-38979866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
552-825
               

               
Cow position:
               
chr29:31786608-31786889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
553-820
               

               
Cow position:
               
chr29:41112936-41112681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
554-716
               

               
Cow position:
               
chr29:18012494-18012660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
554-753
               

               
Cow position:
               
chr29:38978469-38978671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
554-812
               

               
Cow position:
               
chr29:29923636-29923375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
554-820
               

               
Cow position:
               
chr29:19756374-19756646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
554-825
               

               
Cow position:
               
chr29:17462846-17462566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
31, 148
               

               
Conread position:
               
554-827
               

               
Cow position:
               
chr29:43441555-43441292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 176
               

               
Conread position:
               
554-841
               

               
Cow position:
               
chr29:28840093-28840403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
555-724
               

               
Cow position:
               
chr29:4002829-4003002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
555-738
               

               
Cow position:
               
chr29:21285300-21285484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
33, 117
               

               
Conread position:
               
555-791
               

               
Cow position:
               
chr29:44988848-44988624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
557-738
               

               
Cow position:
               
chr29:30708678-30708498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
557-804
               

               
Cow position:
               
chr29:30681769-30681510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
557-811
               

               
Cow position:
               
chr29:32656374-32656636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
557-812
               

               
Cow position:
               
chr29:43544659-43544409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
557-834
               

               
Cow position:
               
chr29:36248977-36249264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
558-822
               

               
Cow position:
               
chr29:22167138-22166876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
15, 158
               

               
Conread position:
               
559-811
               

               
Cow position:
               
chr29:30827350-30827608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
562-807
               

               
Cow position:
               
chr29:11696661-11696888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
562-825
               

               
Cow position:
               
chr29:23155175-23155447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
563-811
               

               
Cow position:
               
chr29:16290673-16290923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
10, 143
               

               
Conread position:
               
565-827
               

               
Cow position:
               
chr29:5139529-5139791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
570-822
               

               
Cow position:
               
chr29:30294916-30294657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
570-823
               

               
Cow position:
               
chr29:22028996-22028747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
572-818
               

               
Cow position:
               
chr29:32307591-32307358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
124, 14
               

               
Conread position:
               
572-821
               

               
Cow position:
               
chr29:29364098-29363854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
238, 83
               

               
Conread position:
               
573-797
               

               
Cow position:
               
chr29:32197657-32197880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
574-821
               

               
Cow position:
               
chr29:5769753-5770000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
65, 120
               

               
Conread position:
               
575-791
               

               
Cow position:
               
chr29:23825250-23825032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
575-803
               

               
Cow position:
               
chr29:27819179-27819397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 137
               

               
Conread position:
               
575-811
               

               
Cow position:
               
chr29:4492398-4492632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
575-822
               

               
Cow position:
               
chr29:44991462-44991209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
152, 58
               

               
Conread position:
               
576-735
               

               
Cow position:
               
chr29:31200220-31200379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
576-741
               

               
Cow position:
               
chr29:30918511-30918675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
576-813
               

               
Cow position:
               
chr29:8686294-8686512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
225, 12
               

               
Conread position:
               
576-820
               

               
Cow position:
               
chr29:22720689-22720437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
71, 166
               

               
Conread position:
               
576-821
               

               
Cow position:
               
chr29:25944339-25944082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 11
               

               
Conread position:
               
576-821
               

               
Cow position:
               
chr29:28066454-28066688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
152, 10
               

               
Conread position:
               
576-822
               

               
Cow position:
               
chr29:4070590-4070833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 61
               

               
Conread position:
               
577-710
               

               
Cow position:
               
chr29:19559060-19558923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
577-797
               

               
Cow position:
               
chr29:23115038-23114814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
38, 27
               

               
Conread position:
               
577-811
               

               
Cow position:
               
chr29:26540576-26540340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 9
               

               
Conread position:
               
578-811
               

               
Cow position:
               
chr29:1933607-1933370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
132, 127
               

               
Conread position:
               
578-822
               

               
Cow position:
               
chr29:19909919-19910174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
9, 122
               

               
Conread position:
               
579-733
               

               
Cow position:
               
chr29:742685-742530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
579-821
               

               
Cow position:
               
chr29:16652115-16652369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 131
               

               
Conread position:
               
579-828
               

               
Cow position:
               
chr29:22533920-22534178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 11
               

               
Conread position:
               
580-791
               

               
Cow position:
               
chr29:2135549-2135348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
580-799
               

               
Cow position:
               
chr29:4423472-4423262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
580-805
               

               
Cow position:
               
chr29:9310566-9310797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 71
               

               
Conread position:
               
580-806
               

               
Cow position:
               
chr29:23711946-23711709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
581-738
               

               
Cow position:
               
chr29:683523-683367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 122
               

               
Conread position:
               
581-794
               

               
Cow position:
               
chr29:18556636-18556850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
9, 151
               

               
Conread position:
               
581-798
               

               
Cow position:
               
chr29:17804503-17804717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
581-809
               

               
Cow position:
               
chr29:23637711-23637476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 127
               

               
Conread position:
               
581-810
               

               
Cow position:
               
chr29:24188098-24187864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
581-810
               

               
Cow position:
               
chr29:26602159-26602399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
581-811
               

               
Cow position:
               
chr29:27524868-27524634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 15
               

               
Conread position:
               
581-818
               

               
Cow position:
               
chr29:38858245-38858005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
146, 9
               

               
Conread position:
               
581-821
               

               
Cow position:
               
chr29:33321318-33321556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
148, 56
               

               
Conread position:
               
581-917
               

               
Cow position:
               
chr29:40791277-40791598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 56
               

               
Conread position:
               
582-743
               

               
Cow position:
               
chr29:16365920-16365755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
582-777
               

               
Cow position:
               
chr29:22032673-22032475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
98, 25
               

               
Conread position:
               
582-811
               

               
Cow position:
               
chr29:37438167-37437933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
166, 148
               

               
Conread position:
               
582-822
               

               
Cow position:
               
chr29:39038301-39038058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
583-809
               

               
Cow position:
               
chr29:36357098-36357326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
583-812
               

               
Cow position:
               
chr29:16278957-16279178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
583-813
               

               
Cow position:
               
chr29:31981800-31982023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
585-782
               

               
Cow position:
               
chr29:29974043-29973842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
126, 36
               

               
Conread position:
               
586-701
               

               
Cow position:
               
chr29:40903147-40903262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
586-795
               

               
Cow position:
               
chr29:24365925-24365713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 66
               

               
Conread position:
               
586-822
               

               
Cow position:
               
chr29:35258957-35259192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
140, 190
               

               
Conread position:
               
586-825
               

               
Cow position:
               
chr29:31934351-31934590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
159, 143
               

               
Conread position:
               
586-827
               

               
Cow position:
               
chr29:396385-396616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
587-811
               

               
Cow position:
               
chr29:3549576-3549805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
588-821
               

               
Cow position:
               
chr29:5789003-5789229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
217, 74
               

               
Conread position:
               
590-791
               

               
Cow position:
               
chr29:22723577-22723776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
138, 189
               

               
Conread position:
               
590-830
               

               
Cow position:
               
chr29:6636061-6636300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
590-834
               

               
Cow position:
               
chr29:44684079-44684321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
591-808
               

               
Cow position:
               
chr29:8163850-8163630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
134, 32
               

               
Conread position:
               
591-810
               

               
Cow position:
               
chr29:44901689-44901462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
591-814
               

               
Cow position:
               
chr29:32656115-32655891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
77, 144
               

               
Conread position:
               
591-827
               

               
Cow position:
               
chr29:7290753-7290985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
207, 140
               

               
Conread position:
               
593-798
               

               
Cow position:
               
chr29:23913414-23913210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
118, 102
               

               
Conread position:
               
593-810
               

               
Cow position:
               
chr29:42444586-42444796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
134, 44
               

               
Conread position:
               
593-822
               

               
Cow position:
               
chr29:34832406-34832184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 49
               

               
Conread position:
               
594-806
               

               
Cow position:
               
chr29:3292928-3293138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
595-725
               

               
Cow position:
               
chr29:34760432-34760306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
595-738
               

               
Cow position:
               
chr29:11527808-11527667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
126, 53
               

               
Conread position:
               
595-740
               

               
Cow position:
               
chr29:34687816-34687962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
595-834
               

               
Cow position:
               
chr29:38754958-38754716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
67, 216
               

               
Conread position:
               
596-830
               

               
Cow position:
               
chr29:9378619-9378855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
597-778
               

               
Cow position:
               
chr29:24051398-24051211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
597-811
               

               
Cow position:
               
chr29:19176930-19176715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 139
               

               
Conread position:
               
598-837
               

               
Cow position:
               
chr29:34359836-34359599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
11, 5
               

               
Conread position:
               
599-741
               

               
Cow position:
               
chr29:40873996-40874138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
599-822
               

               
Cow position:
               
chr29:16200493-16200262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
599-868
               

               
Cow position:
               
chr29:21592693-21592949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
601-799
               

               
Cow position:
               
chr29:4053353-4053156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
601-811
               

               
Cow position:
               
chr29:36781317-36781110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
603-811
               

               
Cow position:
               
chr29:22735117-22734906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
6, 46
               

               
Conread position:
               
603-827
               

               
Cow position:
               
chr29:27683964-27683749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
604-814
               

               
Cow position:
               
chr29:19363701-19363911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 51
               

               
Conread position:
               
604-822
               

               
Cow position:
               
chr29:22729558-22729777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
606-860
               

               
Cow position:
               
chr29:22735458-22735199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
607-743
               

               
Cow position:
               
chr29:16672484-16672620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
119, 104
               

               
Conread position:
               
607-809
               

               
Cow position:
               
chr29:29308578-29308384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
607-813
               

               
Cow position:
               
chr29:19125315-19125532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
607-834
               

               
Cow position:
               
chr29:28420749-28420980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
607-835
               

               
Cow position:
               
chr29:8125366-8125136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
608-727
               

               
Cow position:
               
chr29:19244465-19244345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
608-806
               

               
Cow position:
               
chr29:7954973-7954769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
73, 40
               

               
Conread position:
               
608-812
               

               
Cow position:
               
chr29:4022998-4023197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
609-805
               

               
Cow position:
               
chr29:15796481-15796678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
609-857
               

               
Cow position:
               
chr29:15797947-15798196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
116, 165
               

               
Conread position:
               
610-809
               

               
Cow position:
               
chr29:12890681-12890874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
611-750
               

               
Cow position:
               
chr29:703216-703077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
116, 91
               

               
Conread position:
               
611-816
               

               
Cow position:
               
chr29:43088308-43088513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
613-811
               

               
Cow position:
               
chr29:6517228-6517428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
613-811
               

               
Cow position:
               
chr29:19420614-19420420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
614-809
               

               
Cow position:
               
chr29:26411469-26411272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
112, 175
               

               
Conread position:
               
614-810
               

               
Cow position:
               
chr29:17085682-17085482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
83, 135
               

               
Conread position:
               
614-818
               

               
Cow position:
               
chr29:629538-629744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
113, 159
               

               
Conread position:
               
614-820
               

               
Cow position:
               
chr29:14576859-14577067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
614-822
               

               
Cow position:
               
chr29:31221749-31221956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
105, 126
               

               
Conread position:
               
614-827
               

               
Cow position:
               
chr29:8634654-8634869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
117, 146
               

               
Conread position:
               
615-813
               

               
Cow position:
               
chr29:24026695-24026904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 18
               

               
Conread position:
               
615-819
               

               
Cow position:
               
chr29:40351074-40350873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
616-809
               

               
Cow position:
               
chr29:36697759-36697955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
103, 161
               

               
Conread position:
               
616-826
               

               
Cow position:
               
chr29:6774898-6774693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
115, 26
               

               
Conread position:
               
617-809
               

               
Cow position:
               
chr29:19187029-19187224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
617-822
               

               
Cow position:
               
chr29:5953856-5953647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
112, 196
               

               
Conread position:
               
617-825
               

               
Cow position:
               
chr29:25793149-25793359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 65
               

               
Conread position:
               
617-827
               

               
Cow position:
               
chr29:4441202-4440989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
618-771
               

               
Cow position:
               
chr29:27487195-27487348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
618-819
               

               
Cow position:
               
chr29:685169-684968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
618-822
               

               
Cow position:
               
chr29:26211056-26211267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
111, 85
               

               
Conread position:
               
619-788
               

               
Cow position:
               
chr29:11116656-11116486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
118, 98
               

               
Conread position:
               
619-801
               

               
Cow position:
               
chr29:22335224-22335035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
106, 145
               

               
Conread position:
               
619-825
               

               
Cow position:
               
chr29:17436756-17436961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
110, 65
               

               
Conread position:
               
620-805
               

               
Cow position:
               
chr29:26539241-26539425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
620-805
               

               
Cow position:
               
chr29:41422901-41422715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
620-811
               

               
Cow position:
               
chr29:14375875-14375679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
620-824
               

               
Cow position:
               
chr29:32215713-32215915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
620-841
               

               
Cow position:
               
chr29:8190194-8189985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
191, 111
               

               
Conread position:
               
621-743
               

               
Cow position:
               
chr29:17022157-17022280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
621-804
               

               
Cow position:
               
chr29:25288916-25288726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
621-816
               

               
Cow position:
               
chr29:22652331-22652524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
621-825
               

               
Cow position:
               
chr29:35189613-35189827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
621-827
               

               
Cow position:
               
chr29:7444054-7443847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 89
               

               
Conread position:
               
622-770
               

               
Cow position:
               
chr29:18579830-18579681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
622-821
               

               
Cow position:
               
chr29:9622684-9622499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
622-822
               

               
Cow position:
               
chr29:11489572-11489385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
623-770
               

               
Cow position:
               
chr29:40916817-40916966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 6
               

               
Conread position:
               
623-805
               

               
Cow position:
               
chr29:22991304-22991486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
171, 116
               

               
Conread position:
               
623-811
               

               
Cow position:
               
chr29:28087679-28087874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
623-822
               

               
Cow position:
               
chr29:4648200-4648001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
103, 154
               

               
Conread position:
               
624-766
               

               
Cow position:
               
chr29:5652950-5653097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
626-830
               

               
Cow position:
               
chr29:28948984-28949206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
626-864
               

               
Cow position:
               
chr29:20177692-20177441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 197
               

               
Conread position:
               
627-812
               

               
Cow position:
               
chr29:25432469-25432655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
628-742
               

               
Cow position:
               
chr29:29940654-29940769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
628-794
               

               
Cow position:
               
chr29:33393692-33393871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
628-811
               

               
Cow position:
               
chr29:14746794-14746978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
628-811
               

               
Cow position:
               
chr29:42886985-42887171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
629-802
               

               
Cow position:
               
chr29:934938-935117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
629-808
               

               
Cow position:
               
chr29:16561754-16561577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
141, 10
               

               
Conread position:
               
631-811
               

               
Cow position:
               
chr29:22577162-22576978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
631-820
               

               
Cow position:
               
chr29:3538659-3538476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
631-822
               

               
Cow position:
               
chr29:23142318-23142121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
632-795
               

               
Cow position:
               
chr29:22127888-22128048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
632-814
               

               
Cow position:
               
chr29:27042292-27042479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
94, 8
               

               
Conread position:
               
632-822
               

               
Cow position:
               
chr29:24065704-24065896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
632-827
               

               
Cow position:
               
chr29:20685187-20685386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 101
               

               
Conread position:
               
632-830
               

               
Cow position:
               
chr29:8798997-8798796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
91, 169
               

               
Conread position:
               
633-781
               

               
Cow position:
               
chr29:42977720-42977863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
633-812
               

               
Cow position:
               
chr29:37293054-37293228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
634-806
               

               
Cow position:
               
chr29:23819370-23819189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
75, 67
               

               
Conread position:
               
634-810
               

               
Cow position:
               
chr29:26631061-26631248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
634-811
               

               
Cow position:
               
chr29:22183982-22184158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
634-827
               

               
Cow position:
               
chr29:18748370-18748171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
92, 129
               

               
Conread position:
               
635-814
               

               
Cow position:
               
chr29:19741862-19742034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
636-816
               

               
Cow position:
               
chr29:38775642-38775820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 112
               

               
Conread position:
               
637-822
               

               
Cow position:
               
chr29:4327616-4327798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 68
               

               
Conread position:
               
637-822
               

               
Cow position:
               
chr29:16735247-16735435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 70
               

               
Conread position:
               
637-836
               

               
Cow position:
               
chr29:11894721-11894925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
638-777
               

               
Cow position:
               
chr29:34688882-34688744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
638-810
               

               
Cow position:
               
chr29:1959922-1959756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
638-819
               

               
Cow position:
               
chr29:4484119-4484305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
638-824
               

               
Cow position:
               
chr29:10192015-10191830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
639-772
               

               
Cow position:
               
chr29:29645296-29645154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
639-812
               

               
Cow position:
               
chr29:10203797-10203970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
639-819
               

               
Cow position:
               
chr29:11081371-11081186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
640-798
               

               
Cow position:
               
chr29:30206843-30206692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
640-812
               

               
Cow position:
               
chr29:24660712-24660878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
641-789
               

               
Cow position:
               
chr29:28257168-28257320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
641-797
               

               
Cow position:
               
chr29:16536024-16536175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
122, 81
               

               
Conread position:
               
641-809
               

               
Cow position:
               
chr29:936234-936401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
641-809
               

               
Cow position:
               
chr29:39638871-39639038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
641-812
               

               
Cow position:
               
chr29:17282095-17282262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
641-812
               

               
Cow position:
               
chr29:40763667-40763495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
641-812
               

               
Cow position:
               
chr29:42797983-42798156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
641-822
               

               
Cow position:
               
chr29:31107493-31107673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
85, 61
               

               
Conread position:
               
641-827
               

               
Cow position:
               
chr29:10818423-10818244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
80, 115
               

               
Conread position:
               
641-828
               

               
Cow position:
               
chr29:27929795-27929982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
91, 62
               

               
Conread position:
               
641-828
               

               
Cow position:
               
chr29:27997223-27997031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
642-805
               

               
Cow position:
               
chr29:5064803-5064958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
642-828
               

               
Cow position:
               
chr29:40112410-40112598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
644-810
               

               
Cow position:
               
chr29:43311518-43311343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
644-813
               

               
Cow position:
               
chr29:2219417-2219589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
644-831
               

               
Cow position:
               
chr29:27961937-27961746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
59, 169
               

               
Conread position:
               
645-772
               

               
Cow position:
               
chr29:13091436-13091307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
645-773
               

               
Cow position:
               
chr29:25846528-25846396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
645-791
               

               
Cow position:
               
chr29:41223196-41223344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
645-801
               

               
Cow position:
               
chr29:17663730-17663568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 124
               

               
Conread position:
               
645-809
               

               
Cow position:
               
chr29:14761485-14761646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 114
               

               
Conread position:
               
645-821
               

               
Cow position:
               
chr29:25907277-25907461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
74, 165
               

               
Conread position:
               
647-816
               

               
Cow position:
               
chr29:34274346-34274169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
647-822
               

               
Cow position:
               
chr29:7414534-7414705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
647-825
               

               
Cow position:
               
chr29:44981593-44981420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
648-804
               

               
Cow position:
               
chr29:14227592-14227749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
648-809
               

               
Cow position:
               
chr29:21542204-21542051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 127
               

               
Conread position:
               
648-813
               

               
Cow position:
               
chr29:33143320-33143154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
648-818
               

               
Cow position:
               
chr29:42404981-42405156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
648-821
               

               
Cow position:
               
chr29:27726736-27726902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
648-826
               

               
Cow position:
               
chr29:2414718-2414535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
81, 176
               

               
Conread position:
               
648-830
               

               
Cow position:
               
chr29:38732187-38732374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
648-911
               

               
Cow position:
               
chr29:13063893-13064151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
168, 81
               

               
Conread position:
               
649-802
               

               
Cow position:
               
chr29:1946873-1946724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
649-812
               

               
Cow position:
               
chr29:42646085-42646250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
650-812
               

               
Cow position:
               
chr29:23678745-23678902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
651-810
               

               
Cow position:
               
chr29:7040835-7040669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
651-821
               

               
Cow position:
               
chr29:24604933-24605106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
651-822
               

               
Cow position:
               
chr29:22019150-22018976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
82, 160
               

               
Conread position:
               
651-828
               

               
Cow position:
               
chr29:16438742-16438557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 166
               

               
Conread position:
               
651-848
               

               
Cow position:
               
chr29:22705071-22705282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
653-807
               

               
Cow position:
               
chr29:30920364-30920204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
76, 120
               

               
Conread position:
               
653-811
               

               
Cow position:
               
chr29:25981963-25981803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
654-820
               

               
Cow position:
               
chr29:18605620-18605459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 44
               

               
Conread position:
               
656-811
               

               
Cow position:
               
chr29:11685209-11685369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
658-809
               

               
Cow position:
               
chr29:11050709-11050854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
63, 115
               

               
Conread position:
               
658-813
               

               
Cow position:
               
chr29:22776123-22776278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
658-818
               

               
Cow position:
               
chr29:29296438-29296596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
661-797
               

               
Cow position:
               
chr29:7143342-7143485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
661-810
               

               
Cow position:
               
chr29:36546735-36546583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
661-811
               

               
Cow position:
               
chr29:41094164-41094316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
66, 122
               

               
Conread position:
               
661-822
               

               
Cow position:
               
chr29:27812015-27812173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
662-819
               

               
Cow position:
               
chr29:10994560-10994717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
59, 147
               

               
Conread position:
               
663-822
               

               
Cow position:
               
chr29:24119451-24119284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
663-832
               

               
Cow position:
               
chr29:23539430-23539597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
159, 70
               

               
Conread position:
               
665-820
               

               
Cow position:
               
chr29:18577497-18577650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
667-822
               

               
Cow position:
               
chr29:22736416-22736565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
668-797
               

               
Cow position:
               
chr29:42875667-42875540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
668-812
               

               
Cow position:
               
chr29:27881896-27882043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
668-822
               

               
Cow position:
               
chr29:25669148-25669296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
669-812
               

               
Cow position:
               
chr29:44985327-44985462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
669-823
               

               
Cow position:
               
chr29:8841390-8841237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
670-813
               

               
Cow position:
               
chr29:2071148-2070994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
671-825
               

               
Cow position:
               
chr29:4741334-4741176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 141
               

               
Conread position:
               
673-809
               

               
Cow position:
               
chr29:9149479-9149352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
674-808
               

               
Cow position:
               
chr29:11887328-11887458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
674-813
               

               
Cow position:
               
chr29:33551105-33550971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
675-816
               

               
Cow position:
               
chr29:36183578-36183713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
678-813
               

               
Cow position:
               
chr29:38010509-38010644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 127
               

               
Conread position:
               
680-805
               

               
Cow position:
               
chr29:570773-570650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
682-808
               

               
Cow position:
               
chr29:11686633-11686504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
683-824
               

               
Cow position:
               
chr29:20529007-20529151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
684-805
               

               
Cow position:
               
chr29:10658446-10658324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
685-811
               

               
Cow position:
               
chr29:36830598-36830722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
685-827
               

               
Cow position:
               
chr29:26777079-26777229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
686-811
               

               
Cow position:
               
chr29:659354-659481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
686-812
               

               
Cow position:
               
chr29:5147711-5147836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
686-822
               

               
Cow position:
               
chr29:31378164-31378296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
691-812
               

               
Cow position:
               
chr29:28726904-28727025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
694-809
               

               
Cow position:
               
chr29:31835352-31835466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
696-821
               

               
Cow position:
               
chr29:34919377-34919251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 85
               

               
Conread position:
               
705-812
               

               
Cow position:
               
chr29:7452332-7452442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
710-828
               

               
Cow position:
               
chr29:4603029-4602913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
716-822
               

               
Cow position:
               
chr29:29176258-29176152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
716-827
               

               
Cow position:
               
chr29:2720949-2720839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
722-813
               

               
Cow position:
               
chr29:13085763-13085854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
732-826
               

               
Cow position:
               
chr29:843888-843793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               
Show alignments to all cow chromosomes.