Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rret24_n12.5
        

               Conread position:
               461-713
               

               Cow position:
               chrX:11455166-11454921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               11, 22
               

               Conread position:
               466-822
               

               Cow position:
               chrX:34837171-34836836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 55
               

               Conread position:
               467-749
               

               Cow position:
               chrX:6265715-6265436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               7, 89
               

               Conread position:
               470-743
               

               Cow position:
               chrX:32978190-32977929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 58
               

               Conread position:
               470-810
               

               Cow position:
               chrX:36283244-36283569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 20
               

               Conread position:
               470-819
               

               Cow position:
               chrX:20168446-20168792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 72
               

               Conread position:
               471-700
               

               Cow position:
               chrX:15814974-15815198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               471-725
               

               Cow position:
               chrX:5900358-5900602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               140, 85
               

               Conread position:
               472-771
               

               Cow position:
               chrX:47046611-47046323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               6, 17
               

               Conread position:
               480-814
               

               Cow position:
               chrX:41238453-41238129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 62
               

               Conread position:
               480-825
               

               Cow position:
               chrX:33855335-33854982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 91
               

               Conread position:
               481-789
               

               Cow position:
               chrX:46771060-46770754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               210, 76
               

               Conread position:
               481-822
               

               Cow position:
               chrX:6559547-6559215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 76
               

               Conread position:
               481-834
               

               Cow position:
               chrX:47650308-47649977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               9, 29
               

               Conread position:
               482-811
               

               Cow position:
               chrX:17231634-17231967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               483-822
               

               Cow position:
               chrX:44192542-44192198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               95, 37
               

               Conread position:
               484-724
               

               Cow position:
               chrX:11073287-11073052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               102, 30
               

               Conread position:
               484-738
               

               Cow position:
               chrX:40557778-40557524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               94, 11
               

               Conread position:
               484-742
               

               Cow position:
               chrX:38728640-38728890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               109, 75
               

               Conread position:
               484-743
               

               Cow position:
               chrX:29549645-29549393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               100, 70
               

               Conread position:
               487-821
               

               Cow position:
               chrX:4153130-4152803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 61
               

               Conread position:
               492-806
               

               Cow position:
               chrX:35224206-35224501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               227
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               86, 61
               

               Conread position:
               492-809
               

               Cow position:
               chrX:42381190-42380884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 26
               

               Conread position:
               493-674
               

               Cow position:
               chrX:1572226-1572050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               493-740
               

               Cow position:
               chrX:33493689-33493933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               93, 10
               

               Conread position:
               493-764
               

               Cow position:
               chrX:23113188-23113466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               493-772
               

               Cow position:
               chrX:31252329-31252599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 55
               

               Conread position:
               495-660
               

               Cow position:
               chrX:13785450-13785285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               84, 58
               

               Conread position:
               495-676
               

               Cow position:
               chrX:48201209-48201384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               145, 52
               

               Conread position:
               495-694
               

               Cow position:
               chrX:27680312-27680507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               95, 20
               

               Conread position:
               495-698
               

               Cow position:
               chrX:7509055-7509252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               92, 53
               

               Conread position:
               495-704
               

               Cow position:
               chrX:26625757-26625552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               80, 24
               

               Conread position:
               495-712
               

               Cow position:
               chrX:7571816-7572033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               90, 61
               

               Conread position:
               495-716
               

               Cow position:
               chrX:11851756-11851548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               153, 59
               

               Conread position:
               495-716
               

               Cow position:
               chrX:43567835-43568050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               495-722
               

               Cow position:
               chrX:10412072-10411847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               97, 25
               

               Conread position:
               495-725
               

               Cow position:
               chrX:37986146-37986365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               495-725
               

               Cow position:
               chrX:45846012-45846241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               82, 46
               

               Conread position:
               495-726
               

               Cow position:
               chrX:19273809-19273566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               495-728
               

               Cow position:
               chrX:37232326-37232550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               495-731
               

               Cow position:
               chrX:48044600-48044370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               495-734
               

               Cow position:
               chrX:42470028-42469792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               93, 18
               

               Conread position:
               495-740
               

               Cow position:
               chrX:41884501-41884258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               83, 58
               

               Conread position:
               495-742
               

               Cow position:
               chrX:878464-878222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 24
               

               Conread position:
               495-743
               

               Cow position:
               chrX:616349-616101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               92, 58
               

               Conread position:
               495-743
               

               Cow position:
               chrX:619091-618851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               93, 58
               

               Conread position:
               495-743
               

               Cow position:
               chrX:6690342-6690103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               495-743
               

               Cow position:
               chrX:7718769-7718991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               115, 42
               

               Conread position:
               495-743
               

               Cow position:
               chrX:9416780-9416529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 126
               

               Conread position:
               495-743
               

               Cow position:
               chrX:11318054-11317811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               495-743
               

               Cow position:
               chrX:34401911-34402163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               90, 58
               

               Conread position:
               495-743
               

               Cow position:
               chrX:40269401-40269649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               90, 53
               

               Conread position:
               495-744
               

               Cow position:
               chrX:37836502-37836736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               495-749
               

               Cow position:
               chrX:38006851-38006603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               116, 58
               

               Conread position:
               495-778
               

               Cow position:
               chrX:13647872-13647587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 55
               

               Conread position:
               495-791
               

               Cow position:
               chrX:35542808-35543094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 57
               

               Conread position:
               495-802
               

               Cow position:
               chrX:35273269-35273593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               495-805
               

               Cow position:
               chrX:21986379-21986077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 58
               

               Conread position:
               495-809
               

               Cow position:
               chrX:34532434-34532739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 48
               

               Conread position:
               495-810
               

               Cow position:
               chrX:6413961-6414261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 58
               

               Conread position:
               495-811
               

               Cow position:
               chrX:14884045-14883727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               96, 58
               

               Conread position:
               495-811
               

               Cow position:
               chrX:34376860-34377169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 25
               

               Conread position:
               495-811
               

               Cow position:
               chrX:35590844-35590528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               78, 66
               

               Conread position:
               495-812
               

               Cow position:
               chrX:6544169-6544476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               495-812
               

               Cow position:
               chrX:7646169-7646469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               311, 35
               

               Conread position:
               495-812
               

               Cow position:
               chrX:26881655-26881331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 58
               

               Conread position:
               495-812
               

               Cow position:
               chrX:29050160-29050473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 58
               

               Conread position:
               495-812
               

               Cow position:
               chrX:29229923-29230238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               238
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               225, 58
               

               Conread position:
               495-812
               

               Cow position:
               chrX:37781198-37780880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 55
               

               Conread position:
               495-812
               

               Cow position:
               chrX:38853111-38853442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               225, 46
               

               Conread position:
               495-812
               

               Cow position:
               chrX:40035529-40035211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 11
               

               Conread position:
               495-812
               

               Cow position:
               chrX:43115065-43115380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 57
               

               Conread position:
               495-814
               

               Cow position:
               chrX:38560470-38560783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               495-820
               

               Cow position:
               chrX:7513427-7513749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               129, 61
               

               Conread position:
               495-822
               

               Cow position:
               chrX:4399042-4399358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 24
               

               Conread position:
               495-822
               

               Cow position:
               chrX:5118589-5118255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 56
               

               Conread position:
               495-822
               

               Cow position:
               chrX:41526608-41526295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               495-824
               

               Cow position:
               chrX:1466074-1466405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 48
               

               Conread position:
               495-824
               

               Cow position:
               chrX:11656005-11656321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 53
               

               Conread position:
               495-827
               

               Cow position:
               chrX:7721902-7722219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 66
               

               Conread position:
               495-827
               

               Cow position:
               chrX:27432001-27431676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 51
               

               Conread position:
               495-827
               

               Cow position:
               chrX:33539078-33539395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               55, 95
               

               Conread position:
               495-828
               

               Cow position:
               chrX:5919409-5919735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 36
               

               Conread position:
               495-828
               

               Cow position:
               chrX:42927906-42927583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               495-832
               

               Cow position:
               chrX:9651112-9650774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 44
               

               Conread position:
               495-832
               

               Cow position:
               chrX:20584237-20584560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 228
               

               Conread position:
               495-833
               

               Cow position:
               chrX:47484352-47484004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               73, 59
               

               Conread position:
               495-866
               

               Cow position:
               chrX:22074713-22075078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 45
               

               Conread position:
               496-738
               

               Cow position:
               chrX:27772047-27771816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               496-744
               

               Cow position:
               chrX:5679651-5679410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               113, 55
               

               Conread position:
               496-744
               

               Cow position:
               chrX:20697690-20697453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               496-750
               

               Cow position:
               chrX:6278586-6278334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               90, 60
               

               Conread position:
               496-798
               

               Cow position:
               chrX:34543702-34544003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               228, 46
               

               Conread position:
               496-805
               

               Cow position:
               chrX:1176065-1175766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               92, 63
               

               Conread position:
               496-811
               

               Cow position:
               chrX:46546959-46546643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               496-813
               

               Cow position:
               chrX:45976836-45977156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 52
               

               Conread position:
               496-822
               

               Cow position:
               chrX:47588626-47588955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 63
               

               Conread position:
               496-823
               

               Cow position:
               chrX:42855369-42855705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 47
               

               Conread position:
               496-825
               

               Cow position:
               chrX:25035465-25035140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 60
               

               Conread position:
               496-827
               

               Cow position:
               chrX:45598687-45598361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               117, 60
               

               Conread position:
               496-857
               

               Cow position:
               chrX:18204547-18204195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               152, 60
               

               Conread position:
               497-719
               

               Cow position:
               chrX:47481717-47481930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               497-749
               

               Cow position:
               chrX:45414385-45414142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               497-774
               

               Cow position:
               chrX:24288010-24287740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               90, 54
               

               Conread position:
               498-635
               

               Cow position:
               chrX:35681257-35681392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               85, 56
               

               Conread position:
               498-635
               

               Cow position:
               chrX:42461828-42461694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               498-635
               

               Cow position:
               chrX:42874900-42875033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               87, 58
               

               Conread position:
               498-641
               

               Cow position:
               chrX:40647902-40648044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 56
               

               Conread position:
               498-645
               

               Cow position:
               chrX:36961559-36961701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               498-658
               

               Cow position:
               chrX:6234536-6234376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               75, 56
               

               Conread position:
               498-664
               

               Cow position:
               chrX:11589671-11589509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               498-698
               

               Cow position:
               chrX:21004598-21004797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               85, 48
               

               Conread position:
               498-702
               

               Cow position:
               chrX:45403911-45403708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               81, 53
               

               Conread position:
               498-721
               

               Cow position:
               chrX:11082698-11082486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               87, 21
               

               Conread position:
               498-725
               

               Cow position:
               chrX:4043938-4043727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               111, 21
               

               Conread position:
               498-725
               

               Cow position:
               chrX:7695665-7695888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               498-725
               

               Cow position:
               chrX:17662677-17662458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               498-726
               

               Cow position:
               chrX:39558434-39558209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               498-740
               

               Cow position:
               chrX:45174765-45175006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               498-742
               

               Cow position:
               chrX:7710622-7710380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               223, 55
               

               Conread position:
               498-742
               

               Cow position:
               chrX:29194150-29194390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 33
               

               Conread position:
               498-742
               

               Cow position:
               chrX:45113535-45113776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               94, 58
               

               Conread position:
               498-743
               

               Cow position:
               chrX:16348652-16348414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               194
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               498-743
               

               Cow position:
               chrX:37129185-37129426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               92, 22
               

               Conread position:
               498-743
               

               Cow position:
               chrX:42235612-42235366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               498-743
               

               Cow position:
               chrX:43730302-43730065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 45
               

               Conread position:
               498-744
               

               Cow position:
               chrX:42171380-42171138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 54
               

               Conread position:
               498-755
               

               Cow position:
               chrX:45670141-45670399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               158, 34
               

               Conread position:
               498-778
               

               Cow position:
               chrX:169623-169344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 29
               

               Conread position:
               498-778
               

               Cow position:
               chrX:7336745-7337040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               498-786
               

               Cow position:
               chrX:27946140-27945848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               80, 56
               

               Conread position:
               498-790
               

               Cow position:
               chrX:22821966-22822264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               498-794
               

               Cow position:
               chrX:28878253-28877953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 56
               

               Conread position:
               498-797
               

               Cow position:
               chrX:27228044-27228345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 58
               

               Conread position:
               498-798
               

               Cow position:
               chrX:13868619-13868921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               85, 58
               

               Conread position:
               498-800
               

               Cow position:
               chrX:20151766-20152067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 151
               

               Conread position:
               498-801
               

               Cow position:
               chrX:20882021-20881741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               230
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               86, 45
               

               Conread position:
               498-803
               

               Cow position:
               chrX:842075-842378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 59
               

               Conread position:
               498-805
               

               Cow position:
               chrX:44396934-44397235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 58
               

               Conread position:
               498-806
               

               Cow position:
               chrX:10516172-10516479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 21
               

               Conread position:
               498-807
               

               Cow position:
               chrX:6407465-6407770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 26
               

               Conread position:
               498-809
               

               Cow position:
               chrX:27705503-27705815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               498-809
               

               Cow position:
               chrX:38964020-38964325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               498-810
               

               Cow position:
               chrX:15007233-15006930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 58
               

               Conread position:
               498-810
               

               Cow position:
               chrX:23514099-23513773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 55
               

               Conread position:
               498-810
               

               Cow position:
               chrX:36061074-36061388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               80, 47
               

               Conread position:
               498-811
               

               Cow position:
               chrX:4296903-4296594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               117, 59
               

               Conread position:
               498-811
               

               Cow position:
               chrX:5872237-5872562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 48
               

               Conread position:
               498-811
               

               Cow position:
               chrX:11844328-11844006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               77, 37
               

               Conread position:
               498-811
               

               Cow position:
               chrX:20339973-20339665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               498-811
               

               Cow position:
               chrX:22812983-22813295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               498-811
               

               Cow position:
               chrX:27174912-27175230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 48
               

               Conread position:
               498-811
               

               Cow position:
               chrX:30133404-30133094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 56
               

               Conread position:
               498-811
               

               Cow position:
               chrX:31949017-31948704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               80, 28
               

               Conread position:
               498-811
               

               Cow position:
               chrX:32330077-32330401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               498-811
               

               Cow position:
               chrX:33654925-33654613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 73
               

               Conread position:
               498-811
               

               Cow position:
               chrX:38094605-38094296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 61
               

               Conread position:
               498-811
               

               Cow position:
               chrX:40826835-40826520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               81, 58
               

               Conread position:
               498-811
               

               Cow position:
               chrX:42492597-42492291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 33
               

               Conread position:
               498-811
               

               Cow position:
               chrX:45648789-45649100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               77, 36
               

               Conread position:
               498-811
               

               Cow position:
               chrX:46587736-46588050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 58
               

               Conread position:
               498-811
               

               Cow position:
               chrX:48010517-48010835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               86, 57
               

               Conread position:
               498-812
               

               Cow position:
               chrX:23497752-23497466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               498-812
               

               Cow position:
               chrX:31442905-31442608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               498-812
               

               Cow position:
               chrX:34502838-34503157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 58
               

               Conread position:
               498-812
               

               Cow position:
               chrX:40320324-40320639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               225, 72
               

               Conread position:
               498-814
               

               Cow position:
               chrX:5638249-5637945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 16
               

               Conread position:
               498-816
               

               Cow position:
               chrX:15485708-15485398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               133, 56
               

               Conread position:
               498-816
               

               Cow position:
               chrX:45968076-45968373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 37
               

               Conread position:
               498-817
               

               Cow position:
               chrX:36393428-36393104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 116
               

               Conread position:
               498-817
               

               Cow position:
               chrX:47873420-47873099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               498-818
               

               Cow position:
               chrX:29542303-29541991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 61
               

               Conread position:
               498-819
               

               Cow position:
               chrX:11614616-11614914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 58
               

               Conread position:
               498-819
               

               Cow position:
               chrX:21593204-21593528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               245
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               191, 63
               

               Conread position:
               498-820
               

               Cow position:
               chrX:37489644-37489967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               229, 20
               

               Conread position:
               498-821
               

               Cow position:
               chrX:32020203-32019893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               223, 56
               

               Conread position:
               498-821
               

               Cow position:
               chrX:40680527-40680853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 63
               

               Conread position:
               498-822
               

               Cow position:
               chrX:8869488-8869162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 55
               

               Conread position:
               498-822
               

               Cow position:
               chrX:15545810-15546126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               212, 42
               

               Conread position:
               498-822
               

               Cow position:
               chrX:22387326-22387004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 58
               

               Conread position:
               498-822
               

               Cow position:
               chrX:23563874-23563546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               223, 58
               

               Conread position:
               498-822
               

               Cow position:
               chrX:27261104-27261432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 29
               

               Conread position:
               498-822
               

               Cow position:
               chrX:34454583-34454900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               144, 32
               

               Conread position:
               498-822
               

               Cow position:
               chrX:36975868-36976192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               91, 42
               

               Conread position:
               498-822
               

               Cow position:
               chrX:41027072-41027401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               498-824
               

               Cow position:
               chrX:6488493-6488807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               233
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               259, 42
               

               Conread position:
               498-825
               

               Cow position:
               chrX:21672472-21672811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               94, 61
               

               Conread position:
               498-827
               

               Cow position:
               chrX:4403231-4403566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               130, 45
               

               Conread position:
               498-827
               

               Cow position:
               chrX:20677287-20677609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               236, 61
               

               Conread position:
               498-827
               

               Cow position:
               chrX:20887723-20887404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               498-827
               

               Cow position:
               chrX:31489436-31489766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 59
               

               Conread position:
               498-827
               

               Cow position:
               chrX:46291054-46291387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               87, 55
               

               Conread position:
               498-832
               

               Cow position:
               chrX:30962957-30962620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               77, 58
               

               Conread position:
               498-834
               

               Cow position:
               chrX:29601914-29601575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 58
               

               Conread position:
               498-838
               

               Cow position:
               chrX:4269145-4268812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 58
               

               Conread position:
               498-851
               

               Cow position:
               chrX:15231741-15231389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               231, 44
               

               Conread position:
               499-743
               

               Cow position:
               chrX:17725891-17726135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               85, 57
               

               Conread position:
               499-743
               

               Cow position:
               chrX:45099042-45099287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               63, 89
               

               Conread position:
               499-797
               

               Cow position:
               chrX:41192625-41192905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               499-802
               

               Cow position:
               chrX:31436395-31436690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               499-805
               

               Cow position:
               chrX:14973823-14973533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 57
               

               Conread position:
               499-805
               

               Cow position:
               chrX:17794900-17795203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               222, 45
               

               Conread position:
               499-809
               

               Cow position:
               chrX:918810-918501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               499-812
               

               Cow position:
               chrX:34313946-34314252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               499-812
               

               Cow position:
               chrX:34792391-34792092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               499-827
               

               Cow position:
               chrX:15147270-15146951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 57
               

               Conread position:
               499-827
               

               Cow position:
               chrX:34411759-34412094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 57
               

               Conread position:
               500-725
               

               Cow position:
               chrX:43527428-43527648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               84, 54
               

               Conread position:
               500-743
               

               Cow position:
               chrX:5135607-5135363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               84, 53
               

               Conread position:
               500-809
               

               Cow position:
               chrX:9201468-9201771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 53
               

               Conread position:
               500-812
               

               Cow position:
               chrX:24365907-24365591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 56
               

               Conread position:
               500-812
               

               Cow position:
               chrX:40685413-40685098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 53
               

               Conread position:
               500-820
               

               Cow position:
               chrX:35822261-35822569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               80, 36
               

               Conread position:
               500-822
               

               Cow position:
               chrX:18485717-18486045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               85, 14
               

               Conread position:
               500-827
               

               Cow position:
               chrX:47345252-47345578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               113, 43
               

               Conread position:
               500-828
               

               Cow position:
               chrX:34505129-34504806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 28
               

               Conread position:
               501-638
               

               Cow position:
               chrX:28845750-28845886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 53
               

               Conread position:
               501-666
               

               Cow position:
               chrX:19003219-19003374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               501-683
               

               Cow position:
               chrX:26440859-26440687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               501-685
               

               Cow position:
               chrX:27685167-27685349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               90, 50
               

               Conread position:
               501-699
               

               Cow position:
               chrX:38936616-38936814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               501-712
               

               Cow position:
               chrX:19162421-19162214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 90
               

               Conread position:
               501-716
               

               Cow position:
               chrX:1514487-1514288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               501-719
               

               Cow position:
               chrX:7161979-7162190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               501-727
               

               Cow position:
               chrX:17541883-17542102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               80, 15
               

               Conread position:
               501-728
               

               Cow position:
               chrX:29120965-29121190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               83, 53
               

               Conread position:
               501-733
               

               Cow position:
               chrX:37910365-37910591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               501-739
               

               Cow position:
               chrX:42873313-42873540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               179, 55
               

               Conread position:
               501-740
               

               Cow position:
               chrX:8797172-8797405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               501-742
               

               Cow position:
               chrX:18273139-18272901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               220, 147
               

               Conread position:
               501-743
               

               Cow position:
               chrX:11085137-11084908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               501-743
               

               Cow position:
               chrX:27516448-27516677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               74, 53
               

               Conread position:
               501-743
               

               Cow position:
               chrX:36067932-36068176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               84, 52
               

               Conread position:
               501-743
               

               Cow position:
               chrX:40480949-40480708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 53
               

               Conread position:
               501-743
               

               Cow position:
               chrX:46433410-46433647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               43, 54
               

               Conread position:
               501-749
               

               Cow position:
               chrX:30543369-30543119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               78, 53
               

               Conread position:
               501-753
               

               Cow position:
               chrX:33205045-33204796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               226, 58
               

               Conread position:
               501-754
               

               Cow position:
               chrX:27119619-27119862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               88, 32
               

               Conread position:
               501-764
               

               Cow position:
               chrX:16575042-16575296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               226, 55
               

               Conread position:
               501-774
               

               Cow position:
               chrX:13382249-13382514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               206
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               501-787
               

               Cow position:
               chrX:47246828-47246553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               243, 35
               

               Conread position:
               501-789
               

               Cow position:
               chrX:41068640-41068928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 55
               

               Conread position:
               501-791
               

               Cow position:
               chrX:12309466-12309175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 54
               

               Conread position:
               501-795
               

               Cow position:
               chrX:37119513-37119789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               77, 55
               

               Conread position:
               501-796
               

               Cow position:
               chrX:4768662-4768943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               501-796
               

               Cow position:
               chrX:5680015-5679715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               55, 31
               

               Conread position:
               501-797
               

               Cow position:
               chrX:1616125-1615842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 58
               

               Conread position:
               501-797
               

               Cow position:
               chrX:8731006-8731310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               74, 55
               

               Conread position:
               501-797
               

               Cow position:
               chrX:10831574-10831265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               501-805
               

               Cow position:
               chrX:7277835-7278130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               231, 18
               

               Conread position:
               501-805
               

               Cow position:
               chrX:31260707-31260401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               501-807
               

               Cow position:
               chrX:38654511-38654206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               238
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               86, 15
               

               Conread position:
               501-808
               

               Cow position:
               chrX:11939008-11938726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               126, 40
               

               Conread position:
               501-809
               

               Cow position:
               chrX:34315441-34315755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               501-810
               

               Cow position:
               chrX:9425821-9425533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               61, 85
               

               Conread position:
               501-810
               

               Cow position:
               chrX:17949568-17949263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               212, 55
               

               Conread position:
               501-810
               

               Cow position:
               chrX:47280013-47279707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               129, 58
               

               Conread position:
               501-811
               

               Cow position:
               chrX:3654527-3654833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               70, 54
               

               Conread position:
               501-811
               

               Cow position:
               chrX:9252243-9251933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 52
               

               Conread position:
               501-811
               

               Cow position:
               chrX:10859379-10859083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               122, 44
               

               Conread position:
               501-811
               

               Cow position:
               chrX:12249722-12250045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               78, 13
               

               Conread position:
               501-811
               

               Cow position:
               chrX:27394101-27393788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 42
               

               Conread position:
               501-811
               

               Cow position:
               chrX:29544958-29544657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               17, 61
               

               Conread position:
               501-811
               

               Cow position:
               chrX:41879013-41878707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               35, 28
               

               Conread position:
               501-811
               

               Cow position:
               chrX:48071080-48071392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               232, 74
               

               Conread position:
               501-812
               

               Cow position:
               chrX:1499586-1499885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 41
               

               Conread position:
               501-812
               

               Cow position:
               chrX:1503257-1503538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               83, 41
               

               Conread position:
               501-812
               

               Cow position:
               chrX:11856348-11856654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 35
               

               Conread position:
               501-812
               

               Cow position:
               chrX:32820949-32821271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 55
               

               Conread position:
               501-812
               

               Cow position:
               chrX:34441532-34441222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 55
               

               Conread position:
               501-812
               

               Cow position:
               chrX:35413539-35413825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               39, 56
               

               Conread position:
               501-812
               

               Cow position:
               chrX:39415448-39415159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               501-813
               

               Cow position:
               chrX:31515088-31515399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               77, 44
               

               Conread position:
               501-813
               

               Cow position:
               chrX:38218629-38218945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 88
               

               Conread position:
               501-821
               

               Cow position:
               chrX:151824-152146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               240
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               89, 55
               

               Conread position:
               501-821
               

               Cow position:
               chrX:161332-161638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 56
               

               Conread position:
               501-821
               

               Cow position:
               chrX:16762690-16763007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 29
               

               Conread position:
               501-821
               

               Cow position:
               chrX:21327825-21328151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 58
               

               Conread position:
               501-821
               

               Cow position:
               chrX:44961668-44961997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 56
               

               Conread position:
               501-822
               

               Cow position:
               chrX:12095854-12095528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 55
               

               Conread position:
               501-822
               

               Cow position:
               chrX:25207922-25207620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               501-822
               

               Cow position:
               chrX:27446615-27446927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               232
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               226, 55
               

               Conread position:
               501-822
               

               Cow position:
               chrX:31250306-31250631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 46
               

               Conread position:
               501-822
               

               Cow position:
               chrX:34554645-34554965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               88, 55
               

               Conread position:
               501-822
               

               Cow position:
               chrX:45875312-45875635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               232
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               225, 55
               

               Conread position:
               501-824
               

               Cow position:
               chrX:36356034-36356345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 29
               

               Conread position:
               501-824
               

               Cow position:
               chrX:46532582-46532247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 60
               

               Conread position:
               501-827
               

               Cow position:
               chrX:7178821-7179127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               83, 13
               

               Conread position:
               501-829
               

               Cow position:
               chrX:43049984-43050318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               501-847
               

               Cow position:
               chrX:44054726-44055071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 53
               

               Conread position:
               501-854
               

               Cow position:
               chrX:11633599-11633960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               501-862
               

               Cow position:
               chrX:37955752-37956131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               71, 32
               

               Conread position:
               502-675
               

               Cow position:
               chrX:12405463-12405291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               79, 44
               

               Conread position:
               502-687
               

               Cow position:
               chrX:45993143-45993332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               93, 73
               

               Conread position:
               502-698
               

               Cow position:
               chrX:21566323-21566520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               22, 58
               

               Conread position:
               502-727
               

               Cow position:
               chrX:39126252-39126469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               206, 56
               

               Conread position:
               502-728
               

               Cow position:
               chrX:17630883-17630657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 6
               

               Conread position:
               502-732
               

               Cow position:
               chrX:36514974-36514745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               90, 52
               

               Conread position:
               502-742
               

               Cow position:
               chrX:24424468-24424245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               502-743
               

               Cow position:
               chrX:18695004-18694773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               215, 55
               

               Conread position:
               502-749
               

               Cow position:
               chrX:20801695-20801932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               219, 58
               

               Conread position:
               502-783
               

               Cow position:
               chrX:13853541-13853806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               19, 77
               

               Conread position:
               502-797
               

               Cow position:
               chrX:43779926-43779649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               247, 59
               

               Conread position:
               502-805
               

               Cow position:
               chrX:39220000-39220312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               502-811
               

               Cow position:
               chrX:46072900-46072600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               502-818
               

               Cow position:
               chrX:5017494-5017178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               75, 53
               

               Conread position:
               502-820
               

               Cow position:
               chrX:28846961-28846654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               202, 52
               

               Conread position:
               502-822
               

               Cow position:
               chrX:13923792-13924102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 53
               

               Conread position:
               502-823
               

               Cow position:
               chrX:12290648-12290963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 26
               

               Conread position:
               502-859
               

               Cow position:
               chrX:8925621-8925966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 52
               

               Conread position:
               503-723
               

               Cow position:
               chrX:47054606-47054387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               78, 53
               

               Conread position:
               503-730
               

               Cow position:
               chrX:40692835-40692606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 55
               

               Conread position:
               503-740
               

               Cow position:
               chrX:23562556-23562786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               503-740
               

               Cow position:
               chrX:33639896-33640129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               91, 16
               

               Conread position:
               503-740
               

               Cow position:
               chrX:45884054-45883815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 35
               

               Conread position:
               503-743
               

               Cow position:
               chrX:14599454-14599689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               57, 90
               

               Conread position:
               503-743
               

               Cow position:
               chrX:41271077-41270825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               23, 54
               

               Conread position:
               503-809
               

               Cow position:
               chrX:32420141-32420438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               222, 54
               

               Conread position:
               503-810
               

               Cow position:
               chrX:38549368-38549676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 53
               

               Conread position:
               503-811
               

               Cow position:
               chrX:33000824-33001128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               75, 53
               

               Conread position:
               503-811
               

               Cow position:
               chrX:41122989-41123275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 35
               

               Conread position:
               503-815
               

               Cow position:
               chrX:2300844-2301157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               233, 98
               

               Conread position:
               503-821
               

               Cow position:
               chrX:3579867-3580186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 41
               

               Conread position:
               503-821
               

               Cow position:
               chrX:22283753-22284079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               54, 140
               

               Conread position:
               503-822
               

               Cow position:
               chrX:4632928-4632612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 39
               

               Conread position:
               503-822
               

               Cow position:
               chrX:44657040-44656725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               73, 52
               

               Conread position:
               503-825
               

               Cow position:
               chrX:46032799-46032481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               242, 53
               

               Conread position:
               503-826
               

               Cow position:
               chrX:22115396-22115069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               503-827
               

               Cow position:
               chrX:17966260-17966568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               29, 55
               

               Conread position:
               503-827
               

               Cow position:
               chrX:25815985-25815651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 36
               

               Conread position:
               503-844
               

               Cow position:
               chrX:36866092-36866434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 56
               

               Conread position:
               504-721
               

               Cow position:
               chrX:917443-917232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               504-737
               

               Cow position:
               chrX:31311951-31312182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               86, 38
               

               Conread position:
               504-743
               

               Cow position:
               chrX:9365753-9365517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               81, 52
               

               Conread position:
               504-743
               

               Cow position:
               chrX:29680338-29680103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 52
               

               Conread position:
               504-771
               

               Cow position:
               chrX:4515606-4515878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 52
               

               Conread position:
               504-820
               

               Cow position:
               chrX:47186398-47186086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               8, 39
               

               Conread position:
               504-827
               

               Cow position:
               chrX:35885805-35885484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 51
               

               Conread position:
               504-865
               

               Cow position:
               chrX:34222636-34222988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               505-724
               

               Cow position:
               chrX:3130498-3130711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               79, 36
               

               Conread position:
               505-775
               

               Cow position:
               chrX:40283049-40283317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               84, 51
               

               Conread position:
               505-777
               

               Cow position:
               chrX:27301794-27302073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               111, 54
               

               Conread position:
               505-791
               

               Cow position:
               chrX:47344217-47344509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               86, 51
               

               Conread position:
               505-810
               

               Cow position:
               chrX:34565204-34565514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 50
               

               Conread position:
               505-821
               

               Cow position:
               chrX:8917320-8917636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               222, 51
               

               Conread position:
               505-821
               

               Cow position:
               chrX:28013524-28013202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               87, 51
               

               Conread position:
               505-821
               

               Cow position:
               chrX:28632560-28632242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               87, 56
               

               Conread position:
               505-822
               

               Cow position:
               chrX:7351224-7351544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 51
               

               Conread position:
               505-822
               

               Cow position:
               chrX:27442632-27442295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               114, 51
               

               Conread position:
               505-825
               

               Cow position:
               chrX:10865944-10865626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               199, 54
               

               Conread position:
               505-827
               

               Cow position:
               chrX:8493000-8493311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               218, 49
               

               Conread position:
               505-829
               

               Cow position:
               chrX:14955841-14955519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               89, 52
               

               Conread position:
               505-829
               

               Cow position:
               chrX:26492930-26493254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               101, 51
               

               Conread position:
               506-830
               

               Cow position:
               chrX:31729366-31729685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 50
               

               Conread position:
               506-830
               

               Cow position:
               chrX:33466534-33466868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               67, 50
               

               Conread position:
               507-819
               

               Cow position:
               chrX:30338021-30337716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               214, 47
               

               Conread position:
               507-823
               

               Cow position:
               chrX:41674035-41674342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               202, 48
               

               Conread position:
               507-825
               

               Cow position:
               chrX:42247261-42246936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               507-829
               

               Cow position:
               chrX:126694-127004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               74, 49
               

               Conread position:
               508-734
               

               Cow position:
               chrX:10959471-10959247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               77, 49
               

               Conread position:
               508-750
               

               Cow position:
               chrX:11717862-11717619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               70, 48
               

               Conread position:
               508-767
               

               Cow position:
               chrX:17888492-17888244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               83, 28
               

               Conread position:
               508-786
               

               Cow position:
               chrX:21064208-21064487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 38
               

               Conread position:
               508-797
               

               Cow position:
               chrX:38208617-38208338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               70, 48
               

               Conread position:
               508-805
               

               Cow position:
               chrX:9635259-9634968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 58
               

               Conread position:
               508-809
               

               Cow position:
               chrX:32431542-32431827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               508-810
               

               Cow position:
               chrX:41790518-41790198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               508-811
               

               Cow position:
               chrX:18111315-18111609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               213, 46
               

               Conread position:
               508-822
               

               Cow position:
               chrX:39938597-39938297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 34
               

               Conread position:
               508-827
               

               Cow position:
               chrX:27509097-27508778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 51
               

               Conread position:
               510-735
               

               Cow position:
               chrX:22915108-22914891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               216, 40
               

               Conread position:
               510-809
               

               Cow position:
               chrX:27511355-27511644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 48
               

               Conread position:
               511-786
               

               Cow position:
               chrX:19965473-19965190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 48
               

               Conread position:
               511-790
               

               Cow position:
               chrX:31294634-31294360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 45
               

               Conread position:
               512-811
               

               Cow position:
               chrX:48003777-48004076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               211, 44
               

               Conread position:
               512-812
               

               Cow position:
               chrX:1088206-1087917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               513-738
               

               Cow position:
               chrX:19097291-19097066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               115, 43
               

               Conread position:
               513-740
               

               Cow position:
               chrX:32623498-32623728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               69, 43
               

               Conread position:
               513-811
               

               Cow position:
               chrX:21642547-21642251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               74, 43
               

               Conread position:
               513-827
               

               Cow position:
               chrX:22624406-22624706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               61, 7
               

               Conread position:
               514-821
               

               Cow position:
               chrX:48558675-48558986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 254
               

               Conread position:
               515-765
               

               Cow position:
               chrX:16416441-16416687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               67, 39
               

               Conread position:
               515-813
               

               Cow position:
               chrX:48236752-48237049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 41
               

               Conread position:
               516-696
               

               Cow position:
               chrX:41111655-41111827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               516-772
               

               Cow position:
               chrX:15820531-15820777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               69, 45
               

               Conread position:
               517-775
               

               Cow position:
               chrX:25788961-25788715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               202, 45
               

               Conread position:
               517-797
               

               Cow position:
               chrX:44703137-44702849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               145, 39
               

               Conread position:
               517-798
               

               Cow position:
               chrX:19660532-19660237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               68, 191
               

               Conread position:
               519-827
               

               Cow position:
               chrX:45110593-45110894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               120, 23
               

               Conread position:
               520-736
               

               Cow position:
               chrX:29289517-29289728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               196, 36
               

               Conread position:
               520-756
               

               Cow position:
               chrX:25338123-25338363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               520-783
               

               Cow position:
               chrX:1055456-1055179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               520-812
               

               Cow position:
               chrX:4109128-4109416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 36
               

               Conread position:
               520-812
               

               Cow position:
               chrX:25036925-25037223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 39
               

               Conread position:
               520-822
               

               Cow position:
               chrX:13121868-13122184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 302
               

               Conread position:
               520-822
               

               Cow position:
               chrX:20957186-20957479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 33
               

               Conread position:
               520-822
               

               Cow position:
               chrX:23561799-23562113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 36
               

               Conread position:
               520-827
               

               Cow position:
               chrX:296333-296638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               65, 33
               

               Conread position:
               520-827
               

               Cow position:
               chrX:2675019-2674710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               58, 36
               

               Conread position:
               521-826
               

               Cow position:
               chrX:7648462-7648170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               207, 35
               

               Conread position:
               522-726
               

               Cow position:
               chrX:46429881-46429678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               166
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               6, 21
               

               Conread position:
               522-834
               

               Cow position:
               chrX:39352720-39353024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               523-796
               

               Cow position:
               chrX:4279176-4278904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               187, 28
               

               Conread position:
               524-778
               

               Cow position:
               chrX:14275804-14275551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               46, 62
               

               Conread position:
               524-797
               

               Cow position:
               chrX:1360028-1360298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               55, 32
               

               Conread position:
               524-811
               

               Cow position:
               chrX:13146923-13147214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               54, 32
               

               Conread position:
               524-822
               

               Cow position:
               chrX:30271-30574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               63, 32
               

               Conread position:
               525-725
               

               Cow position:
               chrX:2003933-2003736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               104, 32
               

               Conread position:
               525-743
               

               Cow position:
               chrX:23091811-23092026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               525-770
               

               Cow position:
               chrX:31627038-31626790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 56
               

               Conread position:
               525-821
               

               Cow position:
               chrX:40108573-40108273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               222
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               67, 31
               

               Conread position:
               525-827
               

               Cow position:
               chrX:12437327-12437034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               66, 28
               

               Conread position:
               525-850
               

               Cow position:
               chrX:19469563-19469251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               526-716
               

               Cow position:
               chrX:37574788-37574971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               526-771
               

               Cow position:
               chrX:28866061-28865814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               66, 31
               

               Conread position:
               526-796
               

               Cow position:
               chrX:34238659-34238938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               59, 29
               

               Conread position:
               526-824
               

               Cow position:
               chrX:45502089-45502378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               527-806
               

               Cow position:
               chrX:44339379-44339096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               54, 29
               

               Conread position:
               527-820
               

               Cow position:
               chrX:6541791-6541488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               528-843
               

               Cow position:
               chrX:35985764-35986078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 25
               

               Conread position:
               529-725
               

               Cow position:
               chrX:25328659-25328475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               186, 27
               

               Conread position:
               529-825
               

               Cow position:
               chrX:45448841-45449156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               530-745
               

               Cow position:
               chrX:29408077-29407859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               38, 50
               

               Conread position:
               530-828
               

               Cow position:
               chrX:9360836-9361133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               532-725
               

               Cow position:
               chrX:29115661-29115844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               172, 24
               

               Conread position:
               533-727
               

               Cow position:
               chrX:19943286-19943094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               533-810
               

               Cow position:
               chrX:22393035-22392759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               534-713
               

               Cow position:
               chrX:13359467-13359301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               537-788
               

               Cow position:
               chrX:48121244-48120998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               538-715
               

               Cow position:
               chrX:19690171-19690345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               538-742
               

               Cow position:
               chrX:6260192-6259992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               539-825
               

               Cow position:
               chrX:24331732-24332023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               544-766
               

               Cow position:
               chrX:10305389-10305177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               544-777
               

               Cow position:
               chrX:23188817-23188593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               544-805
               

               Cow position:
               chrX:38642208-38642466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               544-827
               

               Cow position:
               chrX:40532086-40531781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               547-805
               

               Cow position:
               chrX:22482738-22482465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               547-805
               

               Cow position:
               chrX:27075085-27074827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 7
               

               Conread position:
               547-806
               

               Cow position:
               chrX:35268826-35269081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               548-811
               

               Cow position:
               chrX:23088826-23089065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               548-812
               

               Cow position:
               chrX:17956657-17956920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 27
               

               Conread position:
               549-770
               

               Cow position:
               chrX:25459768-25459541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               137, 19
               

               Conread position:
               551-741
               

               Cow position:
               chrX:29553250-29553441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               551-800
               

               Cow position:
               chrX:4645947-4645695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               551-812
               

               Cow position:
               chrX:28940211-28940475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               551-816
               

               Cow position:
               chrX:18964860-18964599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               27, 83
               

               Conread position:
               552-714
               

               Cow position:
               chrX:29585086-29585248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               552-717
               

               Cow position:
               chrX:12082359-12082192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               34, 16
               

               Conread position:
               552-798
               

               Cow position:
               chrX:47061360-47061603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               23, 176
               

               Conread position:
               552-811
               

               Cow position:
               chrX:12979871-12979605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               552-812
               

               Cow position:
               chrX:6599818-6599543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               552-812
               

               Cow position:
               chrX:13913033-13913306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               552-812
               

               Cow position:
               chrX:24749053-24749318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               26, 98
               

               Conread position:
               552-820
               

               Cow position:
               chrX:27306418-27306677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               552-822
               

               Cow position:
               chrX:2523712-2523459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               552-822
               

               Cow position:
               chrX:4289405-4289675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 183
               

               Conread position:
               552-822
               

               Cow position:
               chrX:41871031-41871298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 182
               

               Conread position:
               552-823
               

               Cow position:
               chrX:36367976-36367692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               38, 161
               

               Conread position:
               552-824
               

               Cow position:
               chrX:11326134-11325865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 145
               

               Conread position:
               552-825
               

               Cow position:
               chrX:19394518-19394798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 263
               

               Conread position:
               553-743
               

               Cow position:
               chrX:23785616-23785805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               553-822
               

               Cow position:
               chrX:38321420-38321142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               554-727
               

               Cow position:
               chrX:35759971-35759793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               554-818
               

               Cow position:
               chrX:36392220-36391952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               554-822
               

               Cow position:
               chrX:41941594-41941864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 36
               

               Conread position:
               557-743
               

               Cow position:
               chrX:23498707-23498521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 93
               

               Conread position:
               558-815
               

               Cow position:
               chrX:44660616-44660361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               558-852
               

               Cow position:
               chrX:5134447-5134741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               559-743
               

               Cow position:
               chrX:20743575-20743762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               559-774
               

               Cow position:
               chrX:32318276-32318494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               24, 178
               

               Conread position:
               561-827
               

               Cow position:
               chrX:37072366-37072632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               562-797
               

               Cow position:
               chrX:30840515-30840757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 175
               

               Conread position:
               562-811
               

               Cow position:
               chrX:46793770-46793520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               564-810
               

               Cow position:
               chrX:38967871-38968124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               565-724
               

               Cow position:
               chrX:4616030-4615872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               45, 21
               

               Conread position:
               565-738
               

               Cow position:
               chrX:21665261-21665088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-738
               

               Cow position:
               chrX:25411886-25412059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               18, 139
               

               Conread position:
               566-819
               

               Cow position:
               chrX:42836164-42836416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 9
               

               Conread position:
               569-797
               

               Cow position:
               chrX:45383062-45382845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 83
               

               Conread position:
               569-800
               

               Cow position:
               chrX:42282559-42282796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 6
               

               Conread position:
               569-812
               

               Cow position:
               chrX:1552953-1553201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               570-810
               

               Cow position:
               chrX:45699986-45699751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               40, 29
               

               Conread position:
               570-827
               

               Cow position:
               chrX:44040167-44040425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               145, 17
               

               Conread position:
               572-737
               

               Cow position:
               chrX:42160614-42160776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               149, 29
               

               Conread position:
               572-809
               

               Cow position:
               chrX:16984630-16984863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               573-821
               

               Cow position:
               chrX:26205459-26205217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 13
               

               Conread position:
               573-826
               

               Cow position:
               chrX:32208833-32208581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               154, 14
               

               Conread position:
               575-717
               

               Cow position:
               chrX:4037185-4037042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               10, 113
               

               Conread position:
               575-735
               

               Cow position:
               chrX:38725800-38725957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               575-743
               

               Cow position:
               chrX:18046391-18046551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               575-810
               

               Cow position:
               chrX:43150418-43150660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               575-815
               

               Cow position:
               chrX:42432525-42432280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               575-819
               

               Cow position:
               chrX:26843281-26843028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               575-824
               

               Cow position:
               chrX:40336901-40337154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 76
               

               Conread position:
               575-825
               

               Cow position:
               chrX:27145594-27145847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 154
               

               Conread position:
               575-827
               

               Cow position:
               chrX:3806671-3806926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               575-859
               

               Cow position:
               chrX:42893916-42894202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               576-801
               

               Cow position:
               chrX:47079618-47079847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               142, 220
               

               Conread position:
               576-812
               

               Cow position:
               chrX:32943086-32942849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               16, 206
               

               Conread position:
               576-821
               

               Cow position:
               chrX:29733603-29733352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               15, 214
               

               Conread position:
               576-822
               

               Cow position:
               chrX:24633674-24633928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               202
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               12, 218
               

               Conread position:
               576-827
               

               Cow position:
               chrX:45228473-45228719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               54, 12
               

               Conread position:
               577-816
               

               Cow position:
               chrX:20678146-20677907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               203, 51
               

               Conread position:
               578-740
               

               Cow position:
               chrX:48278256-48278415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               7, 27
               

               Conread position:
               578-797
               

               Cow position:
               chrX:28836888-28837100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               151, 14
               

               Conread position:
               578-804
               

               Cow position:
               chrX:35278322-35278533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               578-822
               

               Cow position:
               chrX:42331272-42331514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               45, 8
               

               Conread position:
               579-805
               

               Cow position:
               chrX:35383040-35382818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               579-809
               

               Cow position:
               chrX:4996580-4996817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               579-827
               

               Cow position:
               chrX:5063244-5063479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               5, 58
               

               Conread position:
               580-742
               

               Cow position:
               chrX:42506232-42506077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               580-800
               

               Cow position:
               chrX:14986159-14985943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               580-805
               

               Cow position:
               chrX:11653759-11653991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               580-810
               

               Cow position:
               chrX:29451547-29451316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               122, 33
               

               Conread position:
               580-811
               

               Cow position:
               chrX:24170734-24170495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               139, 100
               

               Conread position:
               580-819
               

               Cow position:
               chrX:24054666-24054899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               43, 152
               

               Conread position:
               581-743
               

               Cow position:
               chrX:12191757-12191921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               140, 76
               

               Conread position:
               581-810
               

               Cow position:
               chrX:38587847-38587616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 203
               

               Conread position:
               581-820
               

               Cow position:
               chrX:17292950-17293195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 125
               

               Conread position:
               581-821
               

               Cow position:
               chrX:35658795-35659034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               581-822
               

               Cow position:
               chrX:30672400-30672142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               581-828
               

               Cow position:
               chrX:11763005-11762765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               581-828
               

               Cow position:
               chrX:32574313-32574571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               164, 148
               

               Conread position:
               582-717
               

               Cow position:
               chrX:16830221-16830352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               582-806
               

               Cow position:
               chrX:29478721-29478947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               148, 80
               

               Conread position:
               582-809
               

               Cow position:
               chrX:23335975-23335747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               151, 47
               

               Conread position:
               582-811
               

               Cow position:
               chrX:26979792-26979561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               136, 86
               

               Conread position:
               582-811
               

               Cow position:
               chrX:38935278-38935509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               141, 52
               

               Conread position:
               582-822
               

               Cow position:
               chrX:35275983-35276232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               143, 37
               

               Conread position:
               582-822
               

               Cow position:
               chrX:39290356-39290596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 132
               

               Conread position:
               582-831
               

               Cow position:
               chrX:11859540-11859281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               145, 89
               

               Conread position:
               582-831
               

               Cow position:
               chrX:13177482-13177236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 148
               

               Conread position:
               583-743
               

               Cow position:
               chrX:36848580-36848420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               583-746
               

               Cow position:
               chrX:31829463-31829299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               583-812
               

               Cow position:
               chrX:32910102-32910328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 96
               

               Conread position:
               583-830
               

               Cow position:
               chrX:42479831-42480072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 146
               

               Conread position:
               585-699
               

               Cow position:
               chrX:6213870-6213984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               586-725
               

               Cow position:
               chrX:29501880-29501744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               586-806
               

               Cow position:
               chrX:4466968-4467176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               586-809
               

               Cow position:
               chrX:12972682-12972906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 138
               

               Conread position:
               586-821
               

               Cow position:
               chrX:2935958-2936196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 0
               

               Conread position:
               586-822
               

               Cow position:
               chrX:4328182-4327941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               139, 118
               

               Conread position:
               586-827
               

               Cow position:
               chrX:1719116-1719353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               222, 143
               

               Conread position:
               586-827
               

               Cow position:
               chrX:16836285-16836048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               586-827
               

               Cow position:
               chrX:34420735-34420980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               141, 220
               

               Conread position:
               587-811
               

               Cow position:
               chrX:10252196-10251972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               45, 62
               

               Conread position:
               587-811
               

               Cow position:
               chrX:43008611-43008840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               28, 9
               

               Conread position:
               587-822
               

               Cow position:
               chrX:42450012-42449769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               589-725
               

               Cow position:
               chrX:42481727-42481590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               589-806
               

               Cow position:
               chrX:13347276-13347494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 90
               

               Conread position:
               589-811
               

               Cow position:
               chrX:755931-756150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               130, 12
               

               Conread position:
               589-815
               

               Cow position:
               chrX:19761758-19761983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               120, 110
               

               Conread position:
               590-775
               

               Cow position:
               chrX:39180228-39180039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               137, 96
               

               Conread position:
               590-805
               

               Cow position:
               chrX:1122538-1122323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               135, 47
               

               Conread position:
               590-809
               

               Cow position:
               chrX:17524379-17524155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               590-811
               

               Cow position:
               chrX:4559744-4559964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               178
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               135, 42
               

               Conread position:
               590-811
               

               Cow position:
               chrX:25049277-25049051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               590-820
               

               Cow position:
               chrX:24336072-24335838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               133, 222
               

               Conread position:
               591-713
               

               Cow position:
               chrX:37665697-37665819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               591-797
               

               Cow position:
               chrX:41810161-41809959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               591-812
               

               Cow position:
               chrX:4825826-4825617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               591-821
               

               Cow position:
               chrX:19018825-19018588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               591-826
               

               Cow position:
               chrX:31744999-31744767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               29, 147
               

               Conread position:
               591-828
               

               Cow position:
               chrX:38301815-38302063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               592-790
               

               Cow position:
               chrX:3860621-3860440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               592-811
               

               Cow position:
               chrX:19717529-19717741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               592-819
               

               Cow position:
               chrX:40046567-40046327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               137, 15
               

               Conread position:
               593-743
               

               Cow position:
               chrX:28098333-28098484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               593-812
               

               Cow position:
               chrX:16324006-16323784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               132, 38
               

               Conread position:
               593-821
               

               Cow position:
               chrX:35285181-35285413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 219
               

               Conread position:
               595-796
               

               Cow position:
               chrX:46070162-46069970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               12, 133
               

               Conread position:
               595-821
               

               Cow position:
               chrX:27668948-27668723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 170
               

               Conread position:
               596-810
               

               Cow position:
               chrX:19356480-19356693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               44, 66
               

               Conread position:
               596-831
               

               Cow position:
               chrX:35392283-35392054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               216, 54
               

               Conread position:
               597-812
               

               Cow position:
               chrX:23098192-23097987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 52
               

               Conread position:
               598-740
               

               Cow position:
               chrX:47342129-47342271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               129, 42
               

               Conread position:
               598-765
               

               Cow position:
               chrX:35387911-35387747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               598-820
               

               Cow position:
               chrX:753165-753412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               599-777
               

               Cow position:
               chrX:41862378-41862556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               121, 28
               

               Conread position:
               599-796
               

               Cow position:
               chrX:30824001-30824200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               599-822
               

               Cow position:
               chrX:23266429-23266666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               146, 208
               

               Conread position:
               599-824
               

               Cow position:
               chrX:29467764-29467539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 137
               

               Conread position:
               600-814
               

               Cow position:
               chrX:907961-908175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               97, 62
               

               Conread position:
               601-733
               

               Cow position:
               chrX:41164630-41164760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               127, 47
               

               Conread position:
               601-820
               

               Cow position:
               chrX:31479987-31480203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 59
               

               Conread position:
               603-770
               

               Cow position:
               chrX:27667443-27667613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               122, 160
               

               Conread position:
               603-820
               

               Cow position:
               chrX:32877357-32877140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               119, 177
               

               Conread position:
               604-740
               

               Cow position:
               chrX:34508563-34508700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               604-811
               

               Cow position:
               chrX:20345472-20345681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               121, 25
               

               Conread position:
               604-820
               

               Cow position:
               chrX:20583684-20583899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 176
               

               Conread position:
               604-827
               

               Cow position:
               chrX:47854999-47855222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               5, 74
               

               Conread position:
               606-716
               

               Cow position:
               chrX:4617377-4617267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               607-743
               

               Cow position:
               chrX:40355057-40355190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               120, 30
               

               Conread position:
               607-803
               

               Cow position:
               chrX:44991391-44991195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               123, 60
               

               Conread position:
               607-811
               

               Cow position:
               chrX:28067872-28068081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               607-827
               

               Cow position:
               chrX:20340621-20340411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               200, 114
               

               Conread position:
               608-737
               

               Cow position:
               chrX:18637512-18637642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 117
               

               Conread position:
               608-809
               

               Cow position:
               chrX:5026279-5026479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               169, 121
               

               Conread position:
               608-824
               

               Cow position:
               chrX:41454931-41454709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               110, 97
               

               Conread position:
               608-825
               

               Cow position:
               chrX:24425979-24425757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               137, 121
               

               Conread position:
               609-743
               

               Cow position:
               chrX:37062561-37062425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               609-752
               

               Cow position:
               chrX:1337269-1337126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 109
               

               Conread position:
               609-820
               

               Cow position:
               chrX:32866899-32867110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 120
               

               Conread position:
               609-833
               

               Cow position:
               chrX:16763903-16763680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               19, 122
               

               Conread position:
               609-849
               

               Cow position:
               chrX:51872-51639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               118, 28
               

               Conread position:
               611-719
               

               Cow position:
               chrX:21573599-21573706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               611-808
               

               Cow position:
               chrX:7911046-7910846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               73, 116
               

               Conread position:
               611-820
               

               Cow position:
               chrX:23359085-23358877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 37
               

               Conread position:
               612-809
               

               Cow position:
               chrX:35409779-35409980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               109, 75
               

               Conread position:
               612-812
               

               Cow position:
               chrX:41166799-41166598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               612-822
               

               Cow position:
               chrX:46079112-46079331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               111, 86
               

               Conread position:
               612-839
               

               Cow position:
               chrX:11589341-11589114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               613-811
               

               Cow position:
               chrX:2314591-2314388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               161
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               97, 92
               

               Conread position:
               613-824
               

               Cow position:
               chrX:11781281-11781494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               104, 85
               

               Conread position:
               614-737
               

               Cow position:
               chrX:29563053-29562933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               113, 37
               

               Conread position:
               614-743
               

               Cow position:
               chrX:11181167-11181039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               614-743
               

               Cow position:
               chrX:23574684-23574812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               113, 52
               

               Conread position:
               614-806
               

               Cow position:
               chrX:44995527-44995725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               51, 116
               

               Conread position:
               614-810
               

               Cow position:
               chrX:34398755-34398554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               112, 91
               

               Conread position:
               614-812
               

               Cow position:
               chrX:27415551-27415356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               191, 115
               

               Conread position:
               614-813
               

               Cow position:
               chrX:40648923-40649134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               18, 11
               

               Conread position:
               614-827
               

               Cow position:
               chrX:32747759-32747964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               9, 117
               

               Conread position:
               614-827
               

               Cow position:
               chrX:46909844-46910056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               194, 120
               

               Conread position:
               615-725
               

               Cow position:
               chrX:4942228-4942118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               615-753
               

               Cow position:
               chrX:29331965-29331827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               123, 115
               

               Conread position:
               615-791
               

               Cow position:
               chrX:36722775-36722603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               615-797
               

               Cow position:
               chrX:31986544-31986356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               615-805
               

               Cow position:
               chrX:8326934-8327129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               158
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               615-822
               

               Cow position:
               chrX:41453332-41453541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               616-775
               

               Cow position:
               chrX:29688144-29687981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               105, 87
               

               Conread position:
               616-813
               

               Cow position:
               chrX:41858850-41858652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               93, 9
               

               Conread position:
               617-742
               

               Cow position:
               chrX:23860962-23860837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               617-743
               

               Cow position:
               chrX:33151952-33151829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 75
               

               Conread position:
               617-794
               

               Cow position:
               chrX:47379089-47378917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               617-794
               

               Cow position:
               chrX:47756008-47755831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               109, 46
               

               Conread position:
               617-805
               

               Cow position:
               chrX:4612850-4612650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               87, 178
               

               Conread position:
               617-812
               

               Cow position:
               chrX:48822310-48822111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               617-822
               

               Cow position:
               chrX:23136772-23136975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               140, 109
               

               Conread position:
               617-822
               

               Cow position:
               chrX:37749951-37749752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               195, 34
               

               Conread position:
               617-822
               

               Cow position:
               chrX:47100566-47100352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               617-827
               

               Cow position:
               chrX:14925308-14925518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               112, 30
               

               Conread position:
               617-835
               

               Cow position:
               chrX:4091956-4092175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               112, 164
               

               Conread position:
               618-811
               

               Cow position:
               chrX:17498355-17498553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               618-813
               

               Cow position:
               chrX:44754347-44754149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 133
               

               Conread position:
               618-821
               

               Cow position:
               chrX:10278904-10279115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               100, 33
               

               Conread position:
               619-804
               

               Cow position:
               chrX:35681602-35681790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               112, 7
               

               Conread position:
               619-821
               

               Cow position:
               chrX:27416128-27416335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               109, 7
               

               Conread position:
               619-827
               

               Cow position:
               chrX:1960391-1960176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               619-828
               

               Cow position:
               chrX:11454220-11454419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               132, 65
               

               Conread position:
               620-820
               

               Cow position:
               chrX:34991399-34991600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               160
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               121, 110
               

               Conread position:
               620-827
               

               Cow position:
               chrX:27206832-27207040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               47, 141
               

               Conread position:
               620-859
               

               Cow position:
               chrX:27270410-27270645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               62, 143
               

               Conread position:
               621-805
               

               Cow position:
               chrX:47191286-47191098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               621-827
               

               Cow position:
               chrX:11517944-11517730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               622-811
               

               Cow position:
               chrX:37867465-37867663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               622-821
               

               Cow position:
               chrX:10415216-10415013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               96, 83
               

               Conread position:
               623-790
               

               Cow position:
               chrX:19795466-19795300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               623-811
               

               Cow position:
               chrX:8759661-8759853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               623-811
               

               Cow position:
               chrX:37752068-37751881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               623-812
               

               Cow position:
               chrX:16556179-16555992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               623-814
               

               Cow position:
               chrX:44123293-44123482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               623-819
               

               Cow position:
               chrX:876804-876609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               106, 39
               

               Conread position:
               623-830
               

               Cow position:
               chrX:41435511-41435293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               623-834
               

               Cow position:
               chrX:8642084-8642299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               110, 51
               

               Conread position:
               625-804
               

               Cow position:
               chrX:45759711-45759892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               625-809
               

               Cow position:
               chrX:12787-12971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               625-822
               

               Cow position:
               chrX:14951313-14951110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               99, 80
               

               Conread position:
               625-830
               

               Cow position:
               chrX:19203306-19203095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               626-753
               

               Cow position:
               chrX:35019297-35019423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               99, 16
               

               Conread position:
               626-811
               

               Cow position:
               chrX:41215363-41215553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               626-827
               

               Cow position:
               chrX:26882038-26881830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               101, 5
               

               Conread position:
               626-829
               

               Cow position:
               chrX:40056178-40055978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 153
               

               Conread position:
               626-844
               

               Cow position:
               chrX:31983544-31983313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               182
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               101, 229
               

               Conread position:
               627-811
               

               Cow position:
               chrX:23471824-23471638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               628-791
               

               Cow position:
               chrX:25049057-25048892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               117, 31
               

               Conread position:
               628-810
               

               Cow position:
               chrX:34270604-34270790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               99, 128
               

               Conread position:
               628-812
               

               Cow position:
               chrX:5097756-5097563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               41, 169
               

               Conread position:
               628-812
               

               Cow position:
               chrX:40116525-40116699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               628-812
               

               Cow position:
               chrX:42760295-42760484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               628-812
               

               Cow position:
               chrX:46068716-46068533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               628-830
               

               Cow position:
               chrX:6389124-6389328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               99, 47
               

               Conread position:
               629-809
               

               Cow position:
               chrX:31827799-31827627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               629-811
               

               Cow position:
               chrX:42461574-42461397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               629-816
               

               Cow position:
               chrX:28850769-28850948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               629-820
               

               Cow position:
               chrX:18196059-18196237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 59
               

               Conread position:
               629-821
               

               Cow position:
               chrX:48372453-48372261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               629-832
               

               Cow position:
               chrX:25441499-25441306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               176, 11
               

               Conread position:
               631-821
               

               Cow position:
               chrX:20666855-20666662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               46, 104
               

               Conread position:
               631-859
               

               Cow position:
               chrX:42875258-42875486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 195
               

               Conread position:
               632-805
               

               Cow position:
               chrX:6640474-6640648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               95, 69
               

               Conread position:
               632-816
               

               Cow position:
               chrX:6634391-6634580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               86, 73
               

               Conread position:
               632-827
               

               Cow position:
               chrX:30958773-30958974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 102
               

               Conread position:
               632-832
               

               Cow position:
               chrX:597427-597224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               97, 48
               

               Conread position:
               633-811
               

               Cow position:
               chrX:37867301-37867484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               633-820
               

               Cow position:
               chrX:44225683-44225494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               87, 172
               

               Conread position:
               633-828
               

               Cow position:
               chrX:45412191-45411996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               105, 87
               

               Conread position:
               633-892
               

               Cow position:
               chrX:36569008-36568745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 227
               

               Conread position:
               634-743
               

               Cow position:
               chrX:25282989-25282880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               634-797
               

               Cow position:
               chrX:10237864-10237697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               93, 85
               

               Conread position:
               634-811
               

               Cow position:
               chrX:25925593-25925426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               636-827
               

               Cow position:
               chrX:41199275-41199465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               44, 97
               

               Conread position:
               637-773
               

               Cow position:
               chrX:40543469-40543336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               637-778
               

               Cow position:
               chrX:48118681-48118539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 69
               

               Conread position:
               637-803
               

               Cow position:
               chrX:41363807-41363628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               637-822
               

               Cow position:
               chrX:1101609-1101791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               637-827
               

               Cow position:
               chrX:41010950-41011136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               637-861
               

               Cow position:
               chrX:16770116-16770346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               96, 220
               

               Conread position:
               639-828
               

               Cow position:
               chrX:28106901-28107094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               640-821
               

               Cow position:
               chrX:15100038-15100221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               74, 90
               

               Conread position:
               640-824
               

               Cow position:
               chrX:11781506-11781689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               26, 142
               

               Conread position:
               640-827
               

               Cow position:
               chrX:39489136-39488963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               167, 50
               

               Conread position:
               641-811
               

               Cow position:
               chrX:4169975-4169798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               87, 64
               

               Conread position:
               641-816
               

               Cow position:
               chrX:27170795-27170971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               43, 115
               

               Conread position:
               641-819
               

               Cow position:
               chrX:5915244-5915429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               642-795
               

               Cow position:
               chrX:4366397-4366559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               642-810
               

               Cow position:
               chrX:25232054-25232211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               642-811
               

               Cow position:
               chrX:39642565-39642398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               642-835
               

               Cow position:
               chrX:9451402-9451594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               100, 52
               

               Conread position:
               643-811
               

               Cow position:
               chrX:14135736-14135905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               139
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               644-809
               

               Cow position:
               chrX:17525808-17525649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               644-810
               

               Cow position:
               chrX:13459072-13458910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               644-812
               

               Cow position:
               chrX:20752281-20752437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               644-841
               

               Cow position:
               chrX:18812168-18812354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               645-807
               

               Cow position:
               chrX:22552919-22552753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               84, 139
               

               Conread position:
               645-822
               

               Cow position:
               chrX:42086887-42087069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               80, 137
               

               Conread position:
               646-805
               

               Cow position:
               chrX:44798988-44798827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               647-795
               

               Cow position:
               chrX:25286662-25286508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               647-816
               

               Cow position:
               chrX:1102079-1102250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               82, 120
               

               Conread position:
               647-822
               

               Cow position:
               chrX:12212734-12212905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               647-825
               

               Cow position:
               chrX:5487877-5487703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               163, 80
               

               Conread position:
               647-826
               

               Cow position:
               chrX:41765526-41765697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               647-827
               

               Cow position:
               chrX:40556397-40556216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               58, 104
               

               Conread position:
               647-830
               

               Cow position:
               chrX:11529405-11529586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               647-898
               

               Cow position:
               chrX:19407673-19407425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               73, 62
               

               Conread position:
               648-805
               

               Cow position:
               chrX:27202633-27202793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               648-811
               

               Cow position:
               chrX:6480533-6480365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               648-812
               

               Cow position:
               chrX:4750269-4750107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               74, 49
               

               Conread position:
               648-816
               

               Cow position:
               chrX:21288545-21288378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               50, 131
               

               Conread position:
               648-817
               

               Cow position:
               chrX:4444484-4444664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               648-821
               

               Cow position:
               chrX:29682048-29681878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               93, 67
               

               Conread position:
               648-822
               

               Cow position:
               chrX:1938077-1938252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 162
               

               Conread position:
               648-823
               

               Cow position:
               chrX:11602420-11602245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               85, 15
               

               Conread position:
               648-843
               

               Cow position:
               chrX:16801200-16801001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               649-811
               

               Cow position:
               chrX:3494981-3494820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               80, 25
               

               Conread position:
               651-822
               

               Cow position:
               chrX:48574291-48574113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               651-826
               

               Cow position:
               chrX:28923095-28923262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               651-827
               

               Cow position:
               chrX:6274279-6274106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 7
               

               Conread position:
               651-827
               

               Cow position:
               chrX:30042024-30041850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               74, 7
               

               Conread position:
               653-809
               

               Cow position:
               chrX:13191491-13191338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               655-796
               

               Cow position:
               chrX:39419644-39419506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               655-803
               

               Cow position:
               chrX:25420401-25420546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               134, 72
               

               Conread position:
               655-805
               

               Cow position:
               chrX:4486954-4486800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               655-830
               

               Cow position:
               chrX:35509609-35509430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               656-797
               

               Cow position:
               chrX:39094251-39094117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               656-810
               

               Cow position:
               chrX:14900431-14900281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               147, 72
               

               Conread position:
               656-817
               

               Cow position:
               chrX:33678402-33678234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               656-824
               

               Cow position:
               chrX:30789460-30789285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               657-805
               

               Cow position:
               chrX:28167051-28167203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               657-812
               

               Cow position:
               chrX:45657868-45657704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               657-813
               

               Cow position:
               chrX:42994661-42994828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               657-821
               

               Cow position:
               chrX:34194009-34193842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 47
               

               Conread position:
               658-753
               

               Cow position:
               chrX:4886609-4886514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               84
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               658-827
               

               Cow position:
               chrX:11674183-11674358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               72, 47
               

               Conread position:
               658-830
               

               Cow position:
               chrX:24277392-24277551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               659-859
               

               Cow position:
               chrX:34108284-34108081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 45
               

               Conread position:
               661-806
               

               Cow position:
               chrX:43059175-43059031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               661-809
               

               Cow position:
               chrX:42506873-42506718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               661-811
               

               Cow position:
               chrX:11670762-11670917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               661-820
               

               Cow position:
               chrX:36961792-36961951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 117
               

               Conread position:
               661-827
               

               Cow position:
               chrX:1571513-1571350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               661-828
               

               Cow position:
               chrX:231942-231778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               66, 120
               

               Conread position:
               662-821
               

               Cow position:
               chrX:17744700-17744862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               662-827
               

               Cow position:
               chrX:26720605-26720444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               663-819
               

               Cow position:
               chrX:35029848-35029698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               663-822
               

               Cow position:
               chrX:37717800-37717963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               663-825
               

               Cow position:
               chrX:13135476-13135316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               19, 140
               

               Conread position:
               664-811
               

               Cow position:
               chrX:47979376-47979528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               60, 126
               

               Conread position:
               664-815
               

               Cow position:
               chrX:31279845-31279693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               665-809
               

               Cow position:
               chrX:17929081-17929226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               666-772
               

               Cow position:
               chrX:21171-21280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               666-822
               

               Cow position:
               chrX:34367065-34367211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               666-827
               

               Cow position:
               chrX:42314811-42314642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               667-827
               

               Cow position:
               chrX:43028314-43028479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               669-818
               

               Cow position:
               chrX:35390675-35390526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               669-822
               

               Cow position:
               chrX:40108259-40108106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 141
               

               Conread position:
               669-823
               

               Cow position:
               chrX:37176958-37177111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               53, 105
               

               Conread position:
               671-811
               

               Cow position:
               chrX:1996366-1996221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               671-818
               

               Cow position:
               chrX:47730568-47730719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               674-821
               

               Cow position:
               chrX:39887125-39886972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               677-805
               

               Cow position:
               chrX:26956460-26956337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               678-812
               

               Cow position:
               chrX:22284783-22284914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               678-820
               

               Cow position:
               chrX:38727046-38726905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 55
               

               Conread position:
               679-822
               

               Cow position:
               chrX:42216537-42216393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               51, 129
               

               Conread position:
               680-821
               

               Cow position:
               chrX:42165519-42165379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 25
               

               Conread position:
               680-840
               

               Cow position:
               chrX:10479844-10480011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               683-811
               

               Cow position:
               chrX:26367605-26367472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               683-825
               

               Cow position:
               chrX:42159039-42159185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               62, 46
               

               Conread position:
               685-812
               

               Cow position:
               chrX:13892917-13893037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               695-812
               

               Cow position:
               chrX:23182855-23182736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               695-813
               

               Cow position:
               chrX:44253966-44254088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               695-822
               

               Cow position:
               chrX:15534102-15533967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               696-818
               

               Cow position:
               chrX:26625361-26625243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               697-821
               

               Cow position:
               chrX:3130757-3130885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               701-820
               

               Cow position:
               chrX:19162015-19161892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               28, 111
               

               Conread position:
               704-812
               

               Cow position:
               chrX:11501019-11501127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               710-821
               

               Cow position:
               chrX:38726066-38726178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               102, 19
               

               Conread position:
               716-826
               

               Cow position:
               chrX:35848882-35848992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               47, 5
               

               Conread position:
               716-829
               

               Cow position:
               chrX:27689247-27689357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               716-830
               

               Cow position:
               chrX:15545515-15545403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               727-827
               

               Cow position:
               chrX:32590259-32590159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               734-822
               

               Cow position:
               chrX:22134868-22134780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               77
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               734-824
               

               Cow position:
               chrX:33657090-33657179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 0
               
Show alignments to all cow chromosomes.
Conread position:	461-713
Cow position:	chrX:11455166-11454921 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	195
Alignm E-value:	9e-35
Alignm gaps (pig, cow):	11, 22
Conread position:	466-822
Cow position:	chrX:34837171-34836836 (view UCSC Genome Browser custom track)
Alignm length:	359
Alignm identity:	266
Alignm E-value:	0
Alignm gaps (pig, cow):	15, 55
Conread position:	467-749
Cow position:	chrX:6265715-6265436 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	200
Alignm E-value:	8e-34
Alignm gaps (pig, cow):	7, 89
Conread position:	470-743
Cow position:	chrX:32978190-32977929 (view UCSC Genome Browser custom track)
Alignm length:	276
Alignm identity:	209
Alignm E-value:	0
Alignm gaps (pig, cow):	29, 58
Conread position:	470-810
Cow position:	chrX:36283244-36283569 (view UCSC Genome Browser custom track)
Alignm length:	348
Alignm identity:	255
Alignm E-value:	0
Alignm gaps (pig, cow):	151, 20
Conread position:	470-819
Cow position:	chrX:20168446-20168792 (view UCSC Genome Browser custom track)
Alignm length:	355
Alignm identity:	256
Alignm E-value:	0
Alignm gaps (pig, cow):	122, 72
Conread position:	471-700
Cow position:	chrX:15814974-15815198 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	160
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	19, 61
Conread position:	471-725
Cow position:	chrX:5900358-5900602 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	187
Alignm E-value:	4e-38
Alignm gaps (pig, cow):	140, 85
Conread position:	472-771
Cow position:	chrX:47046611-47046323 (view UCSC Genome Browser custom track)
Alignm length:	306
Alignm identity:	204
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	6, 17
Conread position:	480-814
Cow position:	chrX:41238453-41238129 (view UCSC Genome Browser custom track)
Alignm length:	336
Alignm identity:	249
Alignm E-value:	0
Alignm gaps (pig, cow):	110, 62
Conread position:	480-825
Cow position:	chrX:33855335-33854982 (view UCSC Genome Browser custom track)
Alignm length:	360
Alignm identity:	264
Alignm E-value:	0
Alignm gaps (pig, cow):	73, 91
Conread position:	481-789
Cow position:	chrX:46771060-46770754 (view UCSC Genome Browser custom track)
Alignm length:	315
Alignm identity:	210
Alignm E-value:	6e-31
Alignm gaps (pig, cow):	210, 76
Conread position:	481-822
Cow position:	chrX:6559547-6559215 (view UCSC Genome Browser custom track)
Alignm length:	344
Alignm identity:	241
Alignm E-value:	0
Alignm gaps (pig, cow):	18, 76
Conread position:	481-834
Cow position:	chrX:47650308-47649977 (view UCSC Genome Browser custom track)
Alignm length:	362
Alignm identity:	245
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	9, 29
Conread position:	482-811
Cow position:	chrX:17231634-17231967 (view UCSC Genome Browser custom track)
Alignm length:	337
Alignm identity:	231
Alignm E-value:	6.00036e-42
Alignm gaps (pig, cow):	17, 11
Conread position:	483-822
Cow position:	chrX:44192542-44192198 (view UCSC Genome Browser custom track)
Alignm length:	355
Alignm identity:	251
Alignm E-value:	2.00386e-43
Alignm gaps (pig, cow):	95, 37
Conread position:	484-724
Cow position:	chrX:11073287-11073052 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	185
Alignm E-value:	1.99965e-42
Alignm gaps (pig, cow):	102, 30
Conread position:	484-738
Cow position:	chrX:40557778-40557524 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	192
Alignm E-value:	1.99965e-42
Alignm gaps (pig, cow):	94, 11
Conread position:	484-742
Cow position:	chrX:38728640-38728890 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	190
Alignm E-value:	2e-40
Alignm gaps (pig, cow):	109, 75
Conread position:	484-743
Cow position:	chrX:29549645-29549393 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	191
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	100, 70