Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rret33_d17.5
        

               Conread position:
               46-505
               

               Cow position:
               chr1:7786140-7785681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               275, 392
               

               Conread position:
               94-535
               

               Cow position:
               chr1:64778225-64778674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 351
               

               Conread position:
               100-486
               

               Cow position:
               chr1:91978472-91978088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               152, 35
               

               Conread position:
               106-445
               

               Cow position:
               chr1:57646228-57646574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 228
               

               Conread position:
               106-530
               

               Cow position:
               chr1:81859666-81859243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 112
               

               Conread position:
               107-437
               

               Cow position:
               chr1:29462404-29462740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               110-562
               

               Cow position:
               chr1:42874390-42873935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 10
               

               Conread position:
               112-298
               

               Cow position:
               chr1:6940992-6941186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               113-450
               

               Cow position:
               chr1:19471802-19471467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               9, 283
               

               Conread position:
               113-505
               

               Cow position:
               chr1:2075767-2075386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 35
               

               Conread position:
               114-298
               

               Cow position:
               chr1:69678817-69678633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               138, 6
               

               Conread position:
               114-341
               

               Cow position:
               chr1:57908795-57909028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               114-436
               

               Cow position:
               chr1:102289633-102289310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 91
               

               Conread position:
               114-439
               

               Cow position:
               chr1:85865360-85865673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               114-548
               

               Cow position:
               chr1:96963882-96964320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               114-574
               

               Cow position:
               chr1:55163489-55163948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 22
               

               Conread position:
               115-279
               

               Cow position:
               chr1:16589277-16589443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               115-306
               

               Cow position:
               chr1:92881050-92880865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               17, 128
               

               Conread position:
               115-310
               

               Cow position:
               chr1:25282376-25282179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               115-310
               

               Cow position:
               chr1:65394101-65394300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               13, 65
               

               Conread position:
               115-310
               

               Cow position:
               chr1:95071269-95071468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               115-333
               

               Cow position:
               chr1:99792352-99792571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 102
               

               Conread position:
               115-431
               

               Cow position:
               chr1:26934958-26934655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               115-500
               

               Cow position:
               chr1:71135722-71136098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 182
               

               Conread position:
               115-503
               

               Cow position:
               chr1:100450628-100450229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               115-505
               

               Cow position:
               chr1:21131521-21131141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               115-505
               

               Cow position:
               chr1:36874581-36874967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 164
               

               Conread position:
               115-505
               

               Cow position:
               chr1:44769551-44769159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 192
               

               Conread position:
               115-505
               

               Cow position:
               chr1:72012243-72011855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               115-505
               

               Cow position:
               chr1:89937796-89937403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 80
               

               Conread position:
               115-506
               

               Cow position:
               chr1:21092655-21093047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 162
               

               Conread position:
               115-537
               

               Cow position:
               chr1:92370798-92370372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               115-547
               

               Cow position:
               chr1:92433584-92434002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               115-560
               

               Cow position:
               chr1:60033039-60032586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 229
               

               Conread position:
               115-560
               

               Cow position:
               chr1:61564356-61564813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 103
               

               Conread position:
               115-561
               

               Cow position:
               chr1:26930405-26929959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 162
               

               Conread position:
               115-562
               

               Cow position:
               chr1:46694093-46693639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 237
               

               Conread position:
               115-571
               

               Cow position:
               chr1:13638099-13637637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 163
               

               Conread position:
               115-571
               

               Cow position:
               chr1:29671947-29671495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 98
               

               Conread position:
               115-571
               

               Cow position:
               chr1:64678272-64678721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 136
               

               Conread position:
               115-574
               

               Cow position:
               chr1:61724457-61723990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 137
               

               Conread position:
               115-576
               

               Cow position:
               chr1:44154830-44155280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 127
               

               Conread position:
               115-576
               

               Cow position:
               chr1:81569473-81568997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 333
               

               Conread position:
               116-304
               

               Cow position:
               chr1:100759649-100759837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               136, 179
               

               Conread position:
               116-377
               

               Cow position:
               chr1:55586037-55585768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 8
               

               Conread position:
               116-437
               

               Cow position:
               chr1:4278420-4278757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 96
               

               Conread position:
               116-439
               

               Cow position:
               chr1:8659214-8659541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 8
               

               Conread position:
               116-439
               

               Cow position:
               chr1:28989136-28988806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               48, 17
               

               Conread position:
               116-496
               

               Cow position:
               chr1:22516110-22516485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               251
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               50, 8
               

               Conread position:
               116-505
               

               Cow position:
               chr1:34685764-34686144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 103
               

               Conread position:
               116-505
               

               Cow position:
               chr1:82909001-82908609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               137, 199
               

               Conread position:
               116-506
               

               Cow position:
               chr1:67009164-67008787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 122
               

               Conread position:
               116-542
               

               Cow position:
               chr1:57759924-57760357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 8
               

               Conread position:
               116-542
               

               Cow position:
               chr1:98534618-98534191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               137, 8
               

               Conread position:
               116-551
               

               Cow position:
               chr1:31341489-31341048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 8
               

               Conread position:
               116-561
               

               Cow position:
               chr1:93499189-93499636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 8
               

               Conread position:
               116-562
               

               Cow position:
               chr1:83583380-83582916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 60
               

               Conread position:
               116-571
               

               Cow position:
               chr1:47418272-47418737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               300
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               137, 8
               

               Conread position:
               116-571
               

               Cow position:
               chr1:97761195-97761626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 7
               

               Conread position:
               116-575
               

               Cow position:
               chr1:51968035-51968492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 47
               

               Conread position:
               116-576
               

               Cow position:
               chr1:68818250-68817766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 180
               

               Conread position:
               117-310
               

               Cow position:
               chr1:71081032-71080836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               117-530
               

               Cow position:
               chr1:73062835-73062406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               118-296
               

               Cow position:
               chr1:92196798-92196976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               118-310
               

               Cow position:
               chr1:1916937-1916741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               118-505
               

               Cow position:
               chr1:12506897-12506499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               10, 157
               

               Conread position:
               118-505
               

               Cow position:
               chr1:85361419-85361814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 366
               

               Conread position:
               119-398
               

               Cow position:
               chr1:54639851-54640135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               119-469
               

               Cow position:
               chr1:81309187-81309544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               9, 326
               

               Conread position:
               119-505
               

               Cow position:
               chr1:17032772-17032378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 327
               

               Conread position:
               119-547
               

               Cow position:
               chr1:34534067-34534508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 327
               

               Conread position:
               119-571
               

               Cow position:
               chr1:6657267-6656798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               9, 330
               

               Conread position:
               120-286
               

               Cow position:
               chr1:29901420-29901250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               120-300
               

               Cow position:
               chr1:82338248-82338061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               120-300
               

               Cow position:
               chr1:100537207-100537387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               10, 74
               

               Conread position:
               120-305
               

               Cow position:
               chr1:66242241-66242055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               120-329
               

               Cow position:
               chr1:26729005-26729212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               77, 113
               

               Conread position:
               120-353
               

               Cow position:
               chr1:37646707-37646468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               120-405
               

               Cow position:
               chr1:25610935-25610648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               120-429
               

               Cow position:
               chr1:80296361-80296677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               120-432
               

               Cow position:
               chr1:101792529-101792215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               120-450
               

               Cow position:
               chr1:57957291-57956957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 53
               

               Conread position:
               120-452
               

               Cow position:
               chr1:46821576-46821913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 175
               

               Conread position:
               120-455
               

               Cow position:
               chr1:49181630-49181963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               46, 140
               

               Conread position:
               120-489
               

               Cow position:
               chr1:96184441-96184080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 252
               

               Conread position:
               120-497
               

               Cow position:
               chr1:30041294-30041673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               120-498
               

               Cow position:
               chr1:2055306-2054925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               8, 85
               

               Conread position:
               120-503
               

               Cow position:
               chr1:27495064-27495437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               266
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               9, 143
               

               Conread position:
               120-505
               

               Cow position:
               chr1:36613708-36613321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               120-505
               

               Cow position:
               chr1:69941398-69941013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               120-505
               

               Cow position:
               chr1:99642793-99642412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 79
               

               Conread position:
               120-552
               

               Cow position:
               chr1:44836664-44836217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 58
               

               Conread position:
               120-560
               

               Cow position:
               chr1:39069396-39068941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 79
               

               Conread position:
               120-572
               

               Cow position:
               chr1:73584856-73584390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 274
               

               Conread position:
               120-574
               

               Cow position:
               chr1:52496344-52496800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 91
               

               Conread position:
               120-574
               

               Cow position:
               chr1:53308831-53308360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 322
               

               Conread position:
               120-574
               

               Cow position:
               chr1:81228763-81228305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 59
               

               Conread position:
               120-574
               

               Cow position:
               chr1:89742445-89741971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 50
               

               Conread position:
               120-575
               

               Cow position:
               chr1:90621929-90621476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 200
               

               Conread position:
               120-576
               

               Cow position:
               chr1:42887679-42887246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 90
               

               Conread position:
               120-576
               

               Cow position:
               chr1:74822016-74822478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 330
               

               Conread position:
               120-576
               

               Cow position:
               chr1:89349548-89349996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 132
               

               Conread position:
               121-530
               

               Cow position:
               chr1:65943389-65942980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               122-548
               

               Cow position:
               chr1:1829736-1829326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               285
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               130, 185
               

               Conread position:
               124-443
               

               Cow position:
               chr1:60259007-60259332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               237
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               12, 5
               

               Conread position:
               127-308
               

               Cow position:
               chr1:71558913-71558731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               127-403
               

               Cow position:
               chr1:72951056-72951334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               127-535
               

               Cow position:
               chr1:17247826-17247412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               269
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               126, 316
               

               Conread position:
               127-535
               

               Cow position:
               chr1:68087442-68087856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               127, 320
               

               Conread position:
               128-289
               

               Cow position:
               chr1:97311923-97312086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               128-293
               

               Cow position:
               chr1:6883196-6883034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               126, 39
               

               Conread position:
               128-295
               

               Cow position:
               chr1:69963472-69963305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               125, 39
               

               Conread position:
               128-297
               

               Cow position:
               chr1:52507784-52507615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               124, 21
               

               Conread position:
               128-298
               

               Cow position:
               chr1:19517595-19517428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               128-298
               

               Cow position:
               chr1:56748143-56748314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               128-306
               

               Cow position:
               chr1:15333486-15333663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               126, 31
               

               Conread position:
               128-326
               

               Cow position:
               chr1:99262683-99262879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               125, 78
               

               Conread position:
               128-330
               

               Cow position:
               chr1:56425750-56425952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               125, 102
               

               Conread position:
               128-386
               

               Cow position:
               chr1:49962237-49961978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               38, 117
               

               Conread position:
               128-405
               

               Cow position:
               chr1:54179250-54179528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 97
               

               Conread position:
               128-429
               

               Cow position:
               chr1:95637119-95637423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 273
               

               Conread position:
               128-439
               

               Cow position:
               chr1:41251099-41250779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 96
               

               Conread position:
               128-466
               

               Cow position:
               chr1:42053746-42053409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 74
               

               Conread position:
               128-480
               

               Cow position:
               chr1:98073854-98074208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               38, 162
               

               Conread position:
               128-492
               

               Cow position:
               chr1:82504544-82504915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 321
               

               Conread position:
               128-501
               

               Cow position:
               chr1:11728764-11729131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               263
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               59, 192
               

               Conread position:
               128-504
               

               Cow position:
               chr1:21786895-21787283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 326
               

               Conread position:
               128-505
               

               Cow position:
               chr1:15311443-15311823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 289
               

               Conread position:
               128-505
               

               Cow position:
               chr1:44164653-44165036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               128-505
               

               Cow position:
               chr1:52371991-52372369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 313
               

               Conread position:
               128-505
               

               Cow position:
               chr1:89185620-89185225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               274
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               75, 217
               

               Conread position:
               128-506
               

               Cow position:
               chr1:10790679-10791064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               125, 319
               

               Conread position:
               128-506
               

               Cow position:
               chr1:39100616-39101015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               273
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               125, 333
               

               Conread position:
               128-506
               

               Cow position:
               chr1:68619342-68618978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 149
               

               Conread position:
               128-525
               

               Cow position:
               chr1:33547562-33547161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 317
               

               Conread position:
               128-533
               

               Cow position:
               chr1:25553640-25554061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               287
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               109, 294
               

               Conread position:
               128-551
               

               Cow position:
               chr1:68282371-68282797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 322
               

               Conread position:
               128-552
               

               Cow position:
               chr1:51393987-51394424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 297
               

               Conread position:
               128-564
               

               Cow position:
               chr1:52753593-52753149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 81
               

               Conread position:
               129-289
               

               Cow position:
               chr1:41252845-41252694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               129-299
               

               Cow position:
               chr1:53564278-53564449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-304
               

               Cow position:
               chr1:31662153-31662329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-308
               

               Cow position:
               chr1:15386080-15385900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-308
               

               Cow position:
               chr1:23886455-23886275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-310
               

               Cow position:
               chr1:2752236-2752418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-314
               

               Cow position:
               chr1:9595223-9595037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-315
               

               Cow position:
               chr1:64613545-64613732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-316
               

               Cow position:
               chr1:22174195-22174382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               124, 178
               

               Conread position:
               129-319
               

               Cow position:
               chr1:8643091-8643282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-324
               

               Cow position:
               chr1:49773141-49772945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-325
               

               Cow position:
               chr1:43144052-43144249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-329
               

               Cow position:
               chr1:8345568-8345366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-329
               

               Cow position:
               chr1:40766590-40766792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-329
               

               Cow position:
               chr1:56619956-56619754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-329
               

               Cow position:
               chr1:65021380-65021582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-329
               

               Cow position:
               chr1:80130454-80130656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-332
               

               Cow position:
               chr1:64668969-64668763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-387
               

               Cow position:
               chr1:66145539-66145797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               124, 30
               

               Conread position:
               129-391
               

               Cow position:
               chr1:61591205-61590936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               29, 155
               

               Conread position:
               129-397
               

               Cow position:
               chr1:53306770-53307040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-418
               

               Cow position:
               chr1:15417997-15417702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-419
               

               Cow position:
               chr1:22685629-22685920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               124, 275
               

               Conread position:
               129-424
               

               Cow position:
               chr1:19828156-19827858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               118, 277
               

               Conread position:
               129-425
               

               Cow position:
               chr1:52391024-52390729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               124, 266
               

               Conread position:
               129-428
               

               Cow position:
               chr1:53015644-53015949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-432
               

               Cow position:
               chr1:46930115-46929806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-434
               

               Cow position:
               chr1:72589525-72589214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-435
               

               Cow position:
               chr1:61493638-61493950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-438
               

               Cow position:
               chr1:62597385-62597070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-438
               

               Cow position:
               chr1:79498117-79497802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-445
               

               Cow position:
               chr1:15036893-15037231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               21, 217
               

               Conread position:
               129-469
               

               Cow position:
               chr1:99912429-99912084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-481
               

               Cow position:
               chr1:28714874-28715230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               124, 311
               

               Conread position:
               129-481
               

               Cow position:
               chr1:70532922-70533279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-481
               

               Cow position:
               chr1:77177282-77176925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-496
               

               Cow position:
               chr1:21079601-21079229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-503
               

               Cow position:
               chr1:30441523-30441907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               23, 291
               

               Conread position:
               129-505
               

               Cow position:
               chr1:8517232-8516851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               256
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               124, 149
               

               Conread position:
               129-505
               

               Cow position:
               chr1:8845456-8845838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               255
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               63, 315
               

               Conread position:
               129-505
               

               Cow position:
               chr1:13298373-13298753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 75
               

               Conread position:
               129-505
               

               Cow position:
               chr1:26588787-26589169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               124, 315
               

               Conread position:
               129-505
               

               Cow position:
               chr1:31405590-31405971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chr1:36706599-36706218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               252
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chr1:40473901-40474274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               124, 233
               

               Conread position:
               129-505
               

               Cow position:
               chr1:48735773-48736154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chr1:51365945-51366323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               257
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chr1:57421554-57421176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               124, 183
               

               Conread position:
               129-505
               

               Cow position:
               chr1:60114608-60114989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chr1:62928685-62929051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               124, 204
               

               Conread position:
               129-505
               

               Cow position:
               chr1:72806179-72805798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               257
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               124, 204
               

               Conread position:
               129-505
               

               Cow position:
               chr1:77748581-77748958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               125, 242
               

               Conread position:
               129-505
               

               Cow position:
               chr1:84284542-84284924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chr1:87565088-87565469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 316
               

               Conread position:
               129-505
               

               Cow position:
               chr1:89792717-89792336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chr1:95592887-95592506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chr1:97171160-97171541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chr1:98353556-98353175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chr1:102815311-102815692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-506
               

               Cow position:
               chr1:17450589-17450207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-506
               

               Cow position:
               chr1:72462716-72463100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 320
               

               Conread position:
               129-518
               

               Cow position:
               chr1:68145132-68144740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               124, 312
               

               Conread position:
               129-530
               

               Cow position:
               chr1:16372887-16373294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               268
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-530
               

               Cow position:
               chr1:30312266-30312673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:2990322-2990734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               271
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:8402310-8402722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:13150381-13150792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 47
               

               Conread position:
               129-535
               

               Cow position:
               chr1:17056304-17056716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 313
               

               Conread position:
               129-535
               

               Cow position:
               chr1:17058332-17057920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:22546651-22547063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:33464433-33464021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:34197786-34198198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:34820769-34821181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:35147702-35147290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               267
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:39160833-39160421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:42714002-42713591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 30
               

               Conread position:
               129-535
               

               Cow position:
               chr1:46122047-46121635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:47078343-47077931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               269
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:50687562-50687974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:52378811-52379220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               124, 242
               

               Conread position:
               129-535
               

               Cow position:
               chr1:62530391-62530803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               271
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:63760706-63760294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:66368556-66368144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:69513591-69513179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:70897582-70897992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:71774396-71773984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               271
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:74513304-74512892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               270
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:76916907-76917319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chr1:95213805-95213393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-538
               

               Cow position:
               chr1:63583275-63582861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-540
               

               Cow position:
               chr1:2219373-2218959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 315
               

               Conread position:
               129-541
               

               Cow position:
               chr1:84904782-84905197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               274
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               124, 96
               

               Conread position:
               129-542
               

               Cow position:
               chr1:39890194-39890615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               280
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               124, 49
               

               Conread position:
               129-542
               

               Cow position:
               chr1:59626903-59627317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               284
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               124, 35
               

               Conread position:
               129-547
               

               Cow position:
               chr1:10624530-10624958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               281
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-547
               

               Cow position:
               chr1:19357261-19357689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-547
               

               Cow position:
               chr1:32796018-32796436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               288
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 204
               

               Conread position:
               129-547
               

               Cow position:
               chr1:62529945-62529517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-547
               

               Cow position:
               chr1:68052648-68052222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-547
               

               Cow position:
               chr1:82482282-82481854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-547
               

               Cow position:
               chr1:89234194-89233766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-549
               

               Cow position:
               chr1:58067127-58066706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 48
               

               Conread position:
               129-562
               

               Cow position:
               chr1:3931801-3931357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-562
               

               Cow position:
               chr1:7867611-7868055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-562
               

               Cow position:
               chr1:19776363-19776818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               124, 325
               

               Conread position:
               129-562
               

               Cow position:
               chr1:52381283-52381725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               288
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               124, 61
               

               Conread position:
               129-562
               

               Cow position:
               chr1:57538188-57538632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-562
               

               Cow position:
               chr1:67001510-67001954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-562
               

               Cow position:
               chr1:76485968-76485528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               124, 178
               

               Conread position:
               129-562
               

               Cow position:
               chr1:78234848-78234405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 214
               

               Conread position:
               129-562
               

               Cow position:
               chr1:89435489-89435045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-564
               

               Cow position:
               chr1:10119793-10120240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-564
               

               Cow position:
               chr1:67717494-67717047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chr1:1028206-1028659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chr1:4563230-4562777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               293
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chr1:7324876-7325329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chr1:7712612-7713061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               124, 180
               

               Conread position:
               129-571
               

               Cow position:
               chr1:12607912-12607465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               124, 87
               

               Conread position:
               129-571
               

               Cow position:
               chr1:16820445-16820898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chr1:37243864-37243411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               294
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chr1:52068352-52068803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chr1:57272415-57272868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chr1:71123800-71123366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               300
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               124, 204
               

               Conread position:
               129-571
               

               Cow position:
               chr1:78586443-78585989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               298
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               30, 103
               

               Conread position:
               129-571
               

               Cow position:
               chr1:79916842-79916387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               297
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               124, 316
               

               Conread position:
               129-571
               

               Cow position:
               chr1:83059803-83059351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 313
               

               Conread position:
               129-571
               

               Cow position:
               chr1:84255336-84255793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 69
               

               Conread position:
               129-571
               

               Cow position:
               chr1:86497128-86497581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               296
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chr1:87456942-87457395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               295
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chr1:95457190-95457643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-573
               

               Cow position:
               chr1:69872665-69872210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-574
               

               Cow position:
               chr1:8744658-8744205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               124, 62
               

               Conread position:
               129-574
               

               Cow position:
               chr1:20846173-20845731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-574
               

               Cow position:
               chr1:55292804-55292350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-574
               

               Cow position:
               chr1:56666939-56667383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-574
               

               Cow position:
               chr1:68097317-68096863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 318
               

               Conread position:
               129-574
               

               Cow position:
               chr1:85795786-85796242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-576
               

               Cow position:
               chr1:8513428-8512985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 62
               

               Conread position:
               129-576
               

               Cow position:
               chr1:22826746-22827188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 16
               

               Conread position:
               130-434
               

               Cow position:
               chr1:31358623-31358318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               36, 18
               

               Conread position:
               130-457
               

               Cow position:
               chr1:100790330-100790010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               35, 76
               

               Conread position:
               130-504
               

               Cow position:
               chr1:22629053-22628685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 77
               

               Conread position:
               130-505
               

               Cow position:
               chr1:33365770-33366155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               123, 318
               

               Conread position:
               130-505
               

               Cow position:
               chr1:74762116-74761733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               123, 180
               

               Conread position:
               130-505
               

               Cow position:
               chr1:101547462-101547079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 93
               

               Conread position:
               130-505
               

               Cow position:
               chr1:102266693-102266316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 267
               

               Conread position:
               130-548
               

               Cow position:
               chr1:83946439-83946013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               123, 313
               

               Conread position:
               130-571
               

               Cow position:
               chr1:19235656-19235207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               299
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               123, 91
               

               Conread position:
               130-573
               

               Cow position:
               chr1:1023228-1022774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 313
               

               Conread position:
               130-576
               

               Cow position:
               chr1:68253170-68253624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 267
               

               Conread position:
               131-466
               

               Cow position:
               chr1:79002376-79002039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 161
               

               Conread position:
               131-505
               

               Cow position:
               chr1:3382074-3381699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 314
               

               Conread position:
               133-271
               

               Cow position:
               chr1:1348981-1348843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               120, 66
               

               Conread position:
               133-278
               

               Cow position:
               chr1:3062148-3062006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               119, 26
               

               Conread position:
               133-280
               

               Cow position:
               chr1:12804536-12804680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               119, 43
               

               Conread position:
               133-282
               

               Cow position:
               chr1:57264969-57264820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               121, 133
               

               Conread position:
               133-285
               

               Cow position:
               chr1:5024508-5024352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               133-285
               

               Cow position:
               chr1:84786243-84786091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               119, 79
               

               Conread position:
               133-287
               

               Cow position:
               chr1:52994559-52994720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               133-287
               

               Cow position:
               chr1:61283244-61283406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               133-289
               

               Cow position:
               chr1:89510573-89510416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               133-293
               

               Cow position:
               chr1:34857124-34856963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               133-294
               

               Cow position:
               chr1:52913316-52913156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               33, 145
               

               Conread position:
               133-295
               

               Cow position:
               chr1:522856-523015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               133-296
               

               Cow position:
               chr1:25241131-25241293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               120, 31
               

               Conread position:
               133-297
               

               Cow position:
               chr1:28067714-28067878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 106
               

               Conread position:
               133-297
               

               Cow position:
               chr1:95050565-95050395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               133-298
               

               Cow position:
               chr1:3924248-3924083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               121, 27
               

               Conread position:
               133-298
               

               Cow position:
               chr1:8515099-8515265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-298
               

               Cow position:
               chr1:22835958-22836124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-298
               

               Cow position:
               chr1:56129180-56129018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               121, 9
               

               Conread position:
               133-298
               

               Cow position:
               chr1:79165757-79165591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               120, 157
               

               Conread position:
               133-298
               

               Cow position:
               chr1:80421773-80421938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               119, 45
               

               Conread position:
               133-299
               

               Cow position:
               chr1:30664892-30665056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               119, 144
               

               Conread position:
               133-300
               

               Cow position:
               chr1:4055155-4054987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-300
               

               Cow position:
               chr1:31646586-31646420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               119, 9
               

               Conread position:
               133-300
               

               Cow position:
               chr1:53423032-53423201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               133-300
               

               Cow position:
               chr1:75744105-75744277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               133-302
               

               Cow position:
               chr1:10519337-10519508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-304
               

               Cow position:
               chr1:19883765-19883594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               120, 49
               

               Conread position:
               133-307
               

               Cow position:
               chr1:57636669-57636844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               133-307
               

               Cow position:
               chr1:81363115-81363282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               113, 42
               

               Conread position:
               133-308
               

               Cow position:
               chr1:4337600-4337775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               120, 92
               

               Conread position:
               133-308
               

               Cow position:
               chr1:5813716-5813887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               120, 26
               

               Conread position:
               133-308
               

               Cow position:
               chr1:16116556-16116380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               133-308
               

               Cow position:
               chr1:53328220-53328044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               133-308
               

               Cow position:
               chr1:57888894-57889065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               120, 57
               

               Conread position:
               133-308
               

               Cow position:
               chr1:68601787-68601614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               121, 153
               

               Conread position:
               133-308
               

               Cow position:
               chr1:72284716-72284544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               121, 11
               

               Conread position:
               133-308
               

               Cow position:
               chr1:86114342-86114518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-308
               

               Cow position:
               chr1:100510414-100510590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-310
               

               Cow position:
               chr1:9015752-9015929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               133-311
               

               Cow position:
               chr1:24446143-24445966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               119, 27
               

               Conread position:
               133-311
               

               Cow position:
               chr1:25185977-25185798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-313
               

               Cow position:
               chr1:57660458-57660639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-314
               

               Cow position:
               chr1:23117367-23117186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               120, 61
               

               Conread position:
               133-315
               

               Cow position:
               chr1:56476958-56477143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               56, 19
               

               Conread position:
               133-320
               

               Cow position:
               chr1:76095800-76095992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 161
               

               Conread position:
               133-321
               

               Cow position:
               chr1:362498-362686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               120, 98
               

               Conread position:
               133-321
               

               Cow position:
               chr1:69425746-69425558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               120, 179
               

               Conread position:
               133-322
               

               Cow position:
               chr1:16337020-16336832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               161, 99
               

               Conread position:
               133-322
               

               Cow position:
               chr1:42740865-42741054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               120, 177
               

               Conread position:
               133-325
               

               Cow position:
               chr1:20528003-20528196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-326
               

               Cow position:
               chr1:37243171-37243365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-326
               

               Cow position:
               chr1:77883233-77883427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               133-328
               

               Cow position:
               chr1:292543-292346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-328
               

               Cow position:
               chr1:3263962-3264158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-328
               

               Cow position:
               chr1:53704088-53703882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               133-330
               

               Cow position:
               chr1:74327907-74328108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               133-333
               

               Cow position:
               chr1:12143337-12143138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               121, 145
               

               Conread position:
               133-333
               

               Cow position:
               chr1:40531738-40531531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               133-334
               

               Cow position:
               chr1:40926129-40926326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               120, 28
               

               Conread position:
               133-338
               

               Cow position:
               chr1:57156085-57155871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               133-345
               

               Cow position:
               chr1:18282821-18283044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               133-351
               

               Cow position:
               chr1:29657447-29657683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               133-354
               

               Cow position:
               chr1:24412799-24413013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               119, 133
               

               Conread position:
               133-354
               

               Cow position:
               chr1:77114635-77114401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               133-356
               

               Cow position:
               chr1:4662469-4662250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               189, 118
               

               Conread position:
               133-357
               

               Cow position:
               chr1:12419882-12419650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               133-366
               

               Cow position:
               chr1:98618498-98618733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-367
               

               Cow position:
               chr1:80439398-80439167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               33, 63
               

               Conread position:
               133-370
               

               Cow position:
               chr1:68827396-68827158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               148
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-373
               

               Cow position:
               chr1:42176222-42175984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 162
               

               Conread position:
               133-378
               

               Cow position:
               chr1:55429401-55429155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 139
               

               Conread position:
               133-382
               

               Cow position:
               chr1:44076301-44076048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               92, 201
               

               Conread position:
               133-385
               

               Cow position:
               chr1:8130117-8129867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 145
               

               Conread position:
               133-385
               

               Cow position:
               chr1:100816125-100816377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 35
               

               Conread position:
               133-389
               

               Cow position:
               chr1:94464953-94465208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               154, 131
               

               Conread position:
               133-391
               

               Cow position:
               chr1:3963203-3963460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 44
               

               Conread position:
               133-391
               

               Cow position:
               chr1:5289044-5289305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 60
               

               Conread position:
               133-391
               

               Cow position:
               chr1:93795141-93795405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 77
               

               Conread position:
               133-392
               

               Cow position:
               chr1:18663712-18663976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 202
               

               Conread position:
               133-398
               

               Cow position:
               chr1:17707361-17707629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               85, 41
               

               Conread position:
               133-404
               

               Cow position:
               chr1:72104729-72105001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 157
               

               Conread position:
               133-405
               

               Cow position:
               chr1:20147261-20147534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               120, 41
               

               Conread position:
               133-405
               

               Cow position:
               chr1:31350928-31350655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-405
               

               Cow position:
               chr1:53578895-53579168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               120, 71
               

               Conread position:
               133-412
               

               Cow position:
               chr1:4226822-4227107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               47, 197
               

               Conread position:
               133-414
               

               Cow position:
               chr1:89262785-89262484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               133-418
               

               Cow position:
               chr1:22221275-22220987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               120, 71
               

               Conread position:
               133-419
               

               Cow position:
               chr1:27341297-27341585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               133-419
               

               Cow position:
               chr1:31708448-31708735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               120, 271
               

               Conread position:
               133-419
               

               Cow position:
               chr1:72987298-72987578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               120, 198
               

               Conread position:
               133-419
               

               Cow position:
               chr1:82479826-82480111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               120, 248
               

               Conread position:
               133-419
               

               Cow position:
               chr1:82880253-82880539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 55
               

               Conread position:
               133-419
               

               Cow position:
               chr1:91888405-91888118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               120, 273
               

               Conread position:
               133-421
               

               Cow position:
               chr1:55443773-55443488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               120, 60
               

               Conread position:
               133-422
               

               Cow position:
               chr1:6046096-6046379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               120, 185
               

               Conread position:
               133-425
               

               Cow position:
               chr1:3739583-3739870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 85
               

               Conread position:
               133-425
               

               Cow position:
               chr1:85142373-85142079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               33, 201
               

               Conread position:
               133-427
               

               Cow position:
               chr1:50656933-50656630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               120, 246
               

               Conread position:
               133-428
               

               Cow position:
               chr1:59019356-59019653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               133-429
               

               Cow position:
               chr1:71020922-71020614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               133-432
               

               Cow position:
               chr1:101787145-101786842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               33, 240
               

               Conread position:
               133-436
               

               Cow position:
               chr1:72812998-72813298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 29
               

               Conread position:
               133-437
               

               Cow position:
               chr1:71666593-71666286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               112, 144
               

               Conread position:
               133-437
               

               Cow position:
               chr1:88028873-88029173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 158
               

               Conread position:
               133-438
               

               Cow position:
               chr1:31756516-31756824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               92, 37
               

               Conread position:
               133-439
               

               Cow position:
               chr1:3036890-3037205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               33, 6
               

               Conread position:
               133-442
               

               Cow position:
               chr1:52036870-52036549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               133-442
               

               Cow position:
               chr1:63036794-63037113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 201
               

               Conread position:
               133-443
               

               Cow position:
               chr1:30066213-30066525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 244
               

               Conread position:
               133-443
               

               Cow position:
               chr1:89355910-89356229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 233
               

               Conread position:
               133-443
               

               Cow position:
               chr1:90297743-90298061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               53, 157
               

               Conread position:
               133-444
               

               Cow position:
               chr1:22227441-22227741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 135
               

               Conread position:
               133-444
               

               Cow position:
               chr1:40479774-40479460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               121, 48
               

               Conread position:
               133-444
               

               Cow position:
               chr1:42728421-42728087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               33, 216
               

               Conread position:
               133-444
               

               Cow position:
               chr1:62140818-62140497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               133-445
               

               Cow position:
               chr1:3556923-3556599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               121, 37
               

               Conread position:
               133-445
               

               Cow position:
               chr1:41093290-41092971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               33, 127
               

               Conread position:
               133-445
               

               Cow position:
               chr1:44083648-44083965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               48, 102
               

               Conread position:
               133-445
               

               Cow position:
               chr1:88648386-88648057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               25, 129
               

               Conread position:
               133-445
               

               Cow position:
               chr1:89834827-89835126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 43
               

               Conread position:
               133-446
               

               Cow position:
               chr1:96018854-96019161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 84
               

               Conread position:
               133-446
               

               Cow position:
               chr1:96558924-96559238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-447
               

               Cow position:
               chr1:80184158-80183839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-447
               

               Cow position:
               chr1:85866651-85866961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               133-447
               

               Cow position:
               chr1:100132462-100132766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 110
               

               Conread position:
               133-448
               

               Cow position:
               chr1:27956814-27957129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               120, 141
               

               Conread position:
               133-450
               

               Cow position:
               chr1:67577659-67577968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 79
               

               Conread position:
               133-450
               

               Cow position:
               chr1:71676321-71675998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               33, 243
               

               Conread position:
               133-451
               

               Cow position:
               chr1:61721789-61721465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               7, 100
               

               Conread position:
               133-453
               

               Cow position:
               chr1:2318056-2317733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 132
               

               Conread position:
               133-454
               

               Cow position:
               chr1:83560-83881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 194
               

               Conread position:
               133-454
               

               Cow position:
               chr1:30082327-30082654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               12, 314
               

               Conread position:
               133-454
               

               Cow position:
               chr1:55020064-55020383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               31, 77
               

               Conread position:
               133-454
               

               Cow position:
               chr1:60120006-60120338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               33, 63
               

               Conread position:
               133-454
               

               Cow position:
               chr1:63260656-63260341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               57, 122
               

               Conread position:
               133-455
               

               Cow position:
               chr1:99105306-99104980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 201
               

               Conread position:
               133-457
               

               Cow position:
               chr1:53650489-53650800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 144
               

               Conread position:
               133-458
               

               Cow position:
               chr1:9437964-9437642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 143
               

               Conread position:
               133-458
               

               Cow position:
               chr1:58439454-58439143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 115
               

               Conread position:
               133-460
               

               Cow position:
               chr1:23623729-23624083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 343
               

               Conread position:
               133-460
               

               Cow position:
               chr1:81321093-81321424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 61
               

               Conread position:
               133-462
               

               Cow position:
               chr1:51980809-51981145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               133-462
               

               Cow position:
               chr1:65907664-65907341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               120, 132
               

               Conread position:
               133-462
               

               Cow position:
               chr1:71691396-71691732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               133-462
               

               Cow position:
               chr1:77648371-77648021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 309
               

               Conread position:
               133-462
               

               Cow position:
               chr1:88307648-88307317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               34, 167
               

               Conread position:
               133-463
               

               Cow position:
               chr1:51983181-51983496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               133-465
               

               Cow position:
               chr1:73443041-73442703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 328
               

               Conread position:
               133-466
               

               Cow position:
               chr1:92198359-92198686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 63
               

               Conread position:
               133-468
               

               Cow position:
               chr1:17937910-17937574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 308
               

               Conread position:
               133-468
               

               Cow position:
               chr1:21376720-21376383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               120, 309
               

               Conread position:
               133-468
               

               Cow position:
               chr1:61350738-61351069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 55
               

               Conread position:
               133-468
               

               Cow position:
               chr1:63049408-63049742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 264
               

               Conread position:
               133-468
               

               Cow position:
               chr1:82162348-82162009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               133-470
               

               Cow position:
               chr1:23634314-23633985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 43
               

               Conread position:
               133-470
               

               Cow position:
               chr1:65480795-65481137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-471
               

               Cow position:
               chr1:31499203-31499548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 285
               

               Conread position:
               133-472
               

               Cow position:
               chr1:24202147-24201826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 69
               

               Conread position:
               133-472
               

               Cow position:
               chr1:53208119-53207765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               133-474
               

               Cow position:
               chr1:83184835-83185175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 144
               

               Conread position:
               133-477
               

               Cow position:
               chr1:61070595-61070934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               120, 89
               

               Conread position:
               133-480
               

               Cow position:
               chr1:40062028-40062381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 315
               

               Conread position:
               133-481
               

               Cow position:
               chr1:42359849-42360212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               121, 60
               

               Conread position:
               133-482
               

               Cow position:
               chr1:1801730-1802071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 71
               

               Conread position:
               133-483
               

               Cow position:
               chr1:99628241-99627881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               33, 186
               

               Conread position:
               133-484
               

               Cow position:
               chr1:98577061-98577409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 152
               

               Conread position:
               133-488
               

               Cow position:
               chr1:33716803-33717165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 59
               

               Conread position:
               133-488
               

               Cow position:
               chr1:57639919-57639585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               133-488
               

               Cow position:
               chr1:57698876-57698508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 342
               

               Conread position:
               133-495
               

               Cow position:
               chr1:28012487-28012131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 257
               

               Conread position:
               133-496
               

               Cow position:
               chr1:16973268-16972897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               121, 58
               

               Conread position:
               133-498
               

               Cow position:
               chr1:89344493-89344858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 11
               

               Conread position:
               133-500
               

               Cow position:
               chr1:28176586-28176958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               271
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               43, 155
               

               Conread position:
               133-500
               

               Cow position:
               chr1:31399649-31399277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               257
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               44, 117
               

               Conread position:
               133-500
               

               Cow position:
               chr1:72115195-72115559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 142
               

               Conread position:
               133-500
               

               Cow position:
               chr1:92962966-92963344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 324
               

               Conread position:
               133-502
               

               Cow position:
               chr1:4589898-4589523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 85
               

               Conread position:
               133-502
               

               Cow position:
               chr1:16839160-16839534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 314
               

               Conread position:
               133-503
               

               Cow position:
               chr1:41736030-41735672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 25
               

               Conread position:
               133-503
               

               Cow position:
               chr1:96487762-96488136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 311
               

               Conread position:
               133-503
               

               Cow position:
               chr1:97231563-97231910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 55
               

               Conread position:
               133-503
               

               Cow position:
               chr1:99224170-99223791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 316
               

               Conread position:
               133-504
               

               Cow position:
               chr1:31190521-31190156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               44, 87
               

               Conread position:
               133-504
               

               Cow position:
               chr1:53397566-53397938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 316
               

               Conread position:
               133-504
               

               Cow position:
               chr1:57087665-57087290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 58
               

               Conread position:
               133-504
               

               Cow position:
               chr1:66356133-66355763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 267
               

               Conread position:
               133-504
               

               Cow position:
               chr1:75443849-75443468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               259
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               33, 299
               

               Conread position:
               133-504
               

               Cow position:
               chr1:76419698-76420074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-504
               

               Cow position:
               chr1:102552815-102553186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 307
               

               Conread position:
               133-505
               

               Cow position:
               chr1:475721-476098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-505
               

               Cow position:
               chr1:4026770-4027146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 152
               

               Conread position:
               133-505
               

               Cow position:
               chr1:10727930-10728305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 57
               

               Conread position:
               133-505
               

               Cow position:
               chr1:11772492-11772121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 66
               

               Conread position:
               133-505
               

               Cow position:
               chr1:11854108-11853731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 29
               

               Conread position:
               133-505
               

               Cow position:
               chr1:11873772-11873408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 71
               

               Conread position:
               133-505
               

               Cow position:
               chr1:18961906-18961529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               72, 310
               

               Conread position:
               133-505
               

               Cow position:
               chr1:20002674-20002285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 135
               

               Conread position:
               133-505
               

               Cow position:
               chr1:21091103-21091479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               120, 26
               

               Conread position:
               133-505
               

               Cow position:
               chr1:21300592-21300969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               120, 145
               

               Conread position:
               133-505
               

               Cow position:
               chr1:21420815-21420441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               249
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               120, 307
               

               Conread position:
               133-505
               

               Cow position:
               chr1:21577395-21577763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 68
               

               Conread position:
               133-505
               

               Cow position:
               chr1:22229680-22230056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 229
               

               Conread position:
               133-505
               

               Cow position:
               chr1:26702615-26702253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 152
               

               Conread position:
               133-505
               

               Cow position:
               chr1:31535694-31536063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               120, 57
               

               Conread position:
               133-505
               

               Cow position:
               chr1:32451352-32451700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               12, 74
               

               Conread position:
               133-505
               

               Cow position:
               chr1:33855109-33855480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               120, 306
               

               Conread position:
               133-505
               

               Cow position:
               chr1:33910207-33910582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-505
               

               Cow position:
               chr1:35071164-35071540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 217
               

               Conread position:
               133-505
               

               Cow position:
               chr1:35597968-35597595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 100
               

               Conread position:
               133-505
               

               Cow position:
               chr1:39234664-39234307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               59, 191
               

               Conread position:
               133-505
               

               Cow position:
               chr1:40122083-40122461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               256
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               121, 313
               

               Conread position:
               133-505
               

               Cow position:
               chr1:40648395-40648771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               253
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               120, 63
               

               Conread position:
               133-505
               

               Cow position:
               chr1:43380435-43380073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 47
               

               Conread position:
               133-505
               

               Cow position:
               chr1:44136862-44136512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 27
               

               Conread position:
               133-505
               

               Cow position:
               chr1:44818962-44818587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               120, 170
               

               Conread position:
               133-505
               

               Cow position:
               chr1:54199798-54199428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 195
               

               Conread position:
               133-505
               

               Cow position:
               chr1:55260848-55260477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 308
               

               Conread position:
               133-505
               

               Cow position:
               chr1:55780719-55781094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 279
               

               Conread position:
               133-505
               

               Cow position:
               chr1:56140553-56140175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 172
               

               Conread position:
               133-505
               

               Cow position:
               chr1:56190576-56190199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-505
               

               Cow position:
               chr1:56720658-56720281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-505
               

               Cow position:
               chr1:57305416-57305785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 34
               

               Conread position:
               133-505
               

               Cow position:
               chr1:57362490-57362113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               98, 158
               

               Conread position:
               133-505
               

               Cow position:
               chr1:57525232-57524863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 75
               

               Conread position:
               133-505
               

               Cow position:
               chr1:63391190-63390817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 194
               

               Conread position:
               133-505
               

               Cow position:
               chr1:66491420-66491796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 8
               

               Conread position:
               133-505
               

               Cow position:
               chr1:67188582-67188203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               69, 312
               

               Conread position:
               133-505
               

               Cow position:
               chr1:67821635-67821257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 45
               

               Conread position:
               133-505
               

               Cow position:
               chr1:67831291-67830913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 311
               

               Conread position:
               133-505
               

               Cow position:
               chr1:68717398-68717025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 144
               

               Conread position:
               133-505
               

               Cow position:
               chr1:68951225-68951581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 153
               

               Conread position:
               133-505
               

               Cow position:
               chr1:72035347-72034970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 222
               

               Conread position:
               133-505
               

               Cow position:
               chr1:77553350-77552972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               120, 315
               

               Conread position:
               133-505
               

               Cow position:
               chr1:77554160-77553782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               120, 311
               

               Conread position:
               133-505
               

               Cow position:
               chr1:77841127-77841504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-505
               

               Cow position:
               chr1:78807881-78808251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               120, 169
               

               Conread position:
               133-505
               

               Cow position:
               chr1:78921166-78920790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               120, 26
               

               Conread position:
               133-505
               

               Cow position:
               chr1:82920298-82919940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               120, 152
               

               Conread position:
               133-505
               

               Cow position:
               chr1:84240488-84240846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 124
               

               Conread position:
               133-505
               

               Cow position:
               chr1:88338271-88338642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 203
               

               Conread position:
               133-505
               

               Cow position:
               chr1:88970661-88971011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               133-505
               

               Cow position:
               chr1:89084250-89084623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 157
               

               Conread position:
               133-505
               

               Cow position:
               chr1:91105881-91106256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               120, 247
               

               Conread position:
               133-505
               

               Cow position:
               chr1:91799403-91799033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 217
               

               Conread position:
               133-505
               

               Cow position:
               chr1:91902862-91903242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 83
               

               Conread position:
               133-505
               

               Cow position:
               chr1:100421427-100421786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 58
               

               Conread position:
               133-506
               

               Cow position:
               chr1:2169943-2169564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 314
               

               Conread position:
               133-506
               

               Cow position:
               chr1:4368503-4368114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 363
               

               Conread position:
               133-506
               

               Cow position:
               chr1:6462769-6462393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               120, 279
               

               Conread position:
               133-506
               

               Cow position:
               chr1:10071265-10070887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-506
               

               Cow position:
               chr1:13404542-13404167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 57
               

               Conread position:
               133-506
               

               Cow position:
               chr1:23659210-23659576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               252
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               120, 258
               

               Conread position:
               133-506
               

               Cow position:
               chr1:23669950-23669575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-506
               

               Cow position:
               chr1:40310592-40310963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 143
               

               Conread position:
               133-506
               

               Cow position:
               chr1:52171002-52170625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-506
               

               Cow position:
               chr1:53613624-53613239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               267
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               88, 15
               

               Conread position:
               133-506
               

               Cow position:
               chr1:57573742-57573367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 58
               

               Conread position:
               133-506
               

               Cow position:
               chr1:64251485-64251099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 213
               

               Conread position:
               133-506
               

               Cow position:
               chr1:74939787-74940155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               256
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               267, 120
               

               Conread position:
               133-506
               

               Cow position:
               chr1:85413125-85413493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               120, 136
               

               Conread position:
               133-506
               

               Cow position:
               chr1:86706023-86706399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 37
               

               Conread position:
               133-506
               

               Cow position:
               chr1:89766691-89766325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 144
               

               Conread position:
               133-507
               

               Cow position:
               chr1:82378372-82378744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 157
               

               Conread position:
               133-507
               

               Cow position:
               chr1:102321273-102320905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 90
               

               Conread position:
               133-514
               

               Cow position:
               chr1:54732861-54732505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 85
               

               Conread position:
               133-514
               

               Cow position:
               chr1:76748552-76748169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               261
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-518
               

               Cow position:
               chr1:22295850-22295463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 19
               

               Conread position:
               133-520
               

               Cow position:
               chr1:85774046-85774430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 44
               

               Conread position:
               133-525
               

               Cow position:
               chr1:39834882-39835292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               68, 325
               

               Conread position:
               133-525
               

               Cow position:
               chr1:63601945-63601563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 45
               

               Conread position:
               133-526
               

               Cow position:
               chr1:6200151-6200552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 311
               

               Conread position:
               133-526
               

               Cow position:
               chr1:46218156-46218554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 266
               

               Conread position:
               133-526
               

               Cow position:
               chr1:56411883-56412277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               260
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               120, 58
               

               Conread position:
               133-526
               

               Cow position:
               chr1:86599151-86598753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               120, 156
               

               Conread position:
               133-527
               

               Cow position:
               chr1:29429447-29429849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 63
               

               Conread position:
               133-529
               

               Cow position:
               chr1:66971329-66970930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               271
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               121, 45
               

               Conread position:
               133-529
               

               Cow position:
               chr1:100887664-100887266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               206, 58
               

               Conread position:
               133-530
               

               Cow position:
               chr1:2744929-2745333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               266
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               120, 313
               

               Conread position:
               133-530
               

               Cow position:
               chr1:3930277-3929876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 308
               

               Conread position:
               133-530
               

               Cow position:
               chr1:5506347-5506747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 309
               

               Conread position:
               133-530
               

               Cow position:
               chr1:8602135-8601731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 249
               

               Conread position:
               133-530
               

               Cow position:
               chr1:12057412-12057007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-530
               

               Cow position:
               chr1:13250705-13250305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-530
               

               Cow position:
               chr1:14240225-14239825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 240
               

               Conread position:
               133-530
               

               Cow position:
               chr1:25178162-25177757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 314
               

               Conread position:
               133-530
               

               Cow position:
               chr1:26514769-26514368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 308
               

               Conread position:
               133-530
               

               Cow position:
               chr1:28876938-28877343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 311
               

               Conread position:
               133-530
               

               Cow position:
               chr1:30372734-30373135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 308
               

               Conread position:
               133-530
               

               Cow position:
               chr1:30531191-30530789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 72
               

               Conread position:
               133-530
               

               Cow position:
               chr1:31720070-31720474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 110
               

               Conread position:
               133-530
               

               Cow position:
               chr1:32562696-32562291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-530
               

               Cow position:
               chr1:50670658-50671063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-530
               

               Cow position:
               chr1:52354832-52354428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 79
               

               Conread position:
               133-530
               

               Cow position:
               chr1:55158239-55157823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 340
               

               Conread position:
               133-530
               

               Cow position:
               chr1:65390404-65390808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-530
               

               Cow position:
               chr1:73995272-73995682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 137
               

               Conread position:
               133-530
               

               Cow position:
               chr1:79334143-79333739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 15
               

               Conread position:
               133-530
               

               Cow position:
               chr1:90913670-90914071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 23
               

               Conread position:
               133-530
               

               Cow position:
               chr1:97075655-97075250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 312
               

               Conread position:
               133-530
               

               Cow position:
               chr1:99837504-99837103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 215
               

               Conread position:
               133-531
               

               Cow position:
               chr1:18196438-18196846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 312
               

               Conread position:
               133-531
               

               Cow position:
               chr1:61661727-61661313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               150, 34
               

               Conread position:
               133-531
               

               Cow position:
               chr1:85776619-85776211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-534
               

               Cow position:
               chr1:12213905-12213502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 234
               

               Conread position:
               133-535
               

               Cow position:
               chr1:41486454-41486862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               120, 145
               

               Conread position:
               133-535
               

               Cow position:
               chr1:47923025-47922617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-535
               

               Cow position:
               chr1:51732485-51732077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-535
               

               Cow position:
               chr1:70282519-70282921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               278
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               18, 126
               

               Conread position:
               133-535
               

               Cow position:
               chr1:71797313-71796925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 57
               

               Conread position:
               133-535
               

               Cow position:
               chr1:88327405-88327000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 275
               

               Conread position:
               133-535
               

               Cow position:
               chr1:90605001-90604592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 15
               

               Conread position:
               133-535
               

               Cow position:
               chr1:97284793-97284389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 104
               

               Conread position:
               133-536
               

               Cow position:
               chr1:57571675-57572080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 37
               

               Conread position:
               133-536
               

               Cow position:
               chr1:97422716-97422309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 293
               

               Conread position:
               133-539
               

               Cow position:
               chr1:3790472-3790079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 89
               

               Conread position:
               133-540
               

               Cow position:
               chr1:71822338-71821929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 311
               

               Conread position:
               133-541
               

               Cow position:
               chr1:67290452-67290857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 86
               

               Conread position:
               133-542
               

               Cow position:
               chr1:9526408-9526823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               273
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               120, 238
               

               Conread position:
               133-542
               

               Cow position:
               chr1:88983565-88983151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 237
               

               Conread position:
               133-542
               

               Cow position:
               chr1:97206197-97206614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               278
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               120, 144
               

               Conread position:
               133-543
               

               Cow position:
               chr1:27309217-27308808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 177
               

               Conread position:
               133-544
               

               Cow position:
               chr1:3456454-3456868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 70
               

               Conread position:
               133-547
               

               Cow position:
               chr1:4441521-4441108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               133-547
               

               Cow position:
               chr1:49268723-49269147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-547
               

               Cow position:
               chr1:90132854-90132431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               281
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-548
               

               Cow position:
               chr1:38278449-38278026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               120, 29
               

               Conread position:
               133-548
               

               Cow position:
               chr1:63596476-63596052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 44
               

               Conread position:
               133-548
               

               Cow position:
               chr1:101008024-101007618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 73
               

               Conread position:
               133-550
               

               Cow position:
               chr1:3323436-3323872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 72
               

               Conread position:
               133-551
               

               Cow position:
               chr1:4032226-4032637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 141
               

               Conread position:
               133-551
               

               Cow position:
               chr1:8532633-8532208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 218
               

               Conread position:
               133-551
               

               Cow position:
               chr1:31934089-31934512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 285
               

               Conread position:
               133-551
               

               Cow position:
               chr1:41181424-41181850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 252
               

               Conread position:
               133-551
               

               Cow position:
               chr1:58419507-58419941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 58
               

               Conread position:
               133-551
               

               Cow position:
               chr1:76223109-76222683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 37
               

               Conread position:
               133-552
               

               Cow position:
               chr1:68912338-68912745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 20
               

               Conread position:
               133-552
               

               Cow position:
               chr1:76020098-76019687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 197
               

               Conread position:
               133-552
               

               Cow position:
               chr1:94226966-94226548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 278
               

               Conread position:
               133-553
               

               Cow position:
               chr1:41004783-41004353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 42
               

               Conread position:
               133-554
               

               Cow position:
               chr1:88298052-88298469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               120, 61
               

               Conread position:
               133-558
               

               Cow position:
               chr1:665953-666377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               133-558
               

               Cow position:
               chr1:77620128-77620557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 246
               

               Conread position:
               133-558
               

               Cow position:
               chr1:89342406-89341973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 88
               

               Conread position:
               133-560
               

               Cow position:
               chr1:32108666-32109097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 238
               

               Conread position:
               133-560
               

               Cow position:
               chr1:35769027-35769452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 146
               

               Conread position:
               133-561
               

               Cow position:
               chr1:19465642-19466069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 90
               

               Conread position:
               133-561
               

               Cow position:
               chr1:52564196-52563793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 85
               

               Conread position:
               133-562
               

               Cow position:
               chr1:51910041-51909631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               299
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               120, 96
               

               Conread position:
               133-562
               

               Cow position:
               chr1:54207238-54206797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 136
               

               Conread position:
               133-562
               

               Cow position:
               chr1:57615334-57615774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-562
               

               Cow position:
               chr1:71946782-71946353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 59
               

               Conread position:
               133-563
               

               Cow position:
               chr1:37309934-37309501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 181
               

               Conread position:
               133-564
               

               Cow position:
               chr1:83082586-83083019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 59
               

               Conread position:
               133-565
               

               Cow position:
               chr1:12596322-12595881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 230
               

               Conread position:
               133-567
               

               Cow position:
               chr1:22728631-22729078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 105
               

               Conread position:
               133-568
               

               Cow position:
               chr1:14528626-14528179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               300
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 321
               

               Conread position:
               133-568
               

               Cow position:
               chr1:20385043-20384596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 314
               

               Conread position:
               133-570
               

               Cow position:
               chr1:70068568-70068123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 90
               

               Conread position:
               133-571
               

               Cow position:
               chr1:11665698-11665249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chr1:17457378-17457826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               287
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               120, 309
               

               Conread position:
               133-571
               

               Cow position:
               chr1:18182262-18181818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 299
               

               Conread position:
               133-571
               

               Cow position:
               chr1:20832722-20833171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chr1:22483760-22483324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               188, 100
               

               Conread position:
               133-571
               

               Cow position:
               chr1:30236644-30236196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               295
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               120, 136
               

               Conread position:
               133-571
               

               Cow position:
               chr1:31714868-31714420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chr1:32768080-32767632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               293
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               120, 309
               

               Conread position:
               133-571
               

               Cow position:
               chr1:43353067-43352628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 186
               

               Conread position:
               133-571
               

               Cow position:
               chr1:48731254-48730804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 169
               

               Conread position:
               133-571
               

               Cow position:
               chr1:60342817-60343260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               120, 311
               

               Conread position:
               133-571
               

               Cow position:
               chr1:63340630-63340184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               120, 95
               

               Conread position:
               133-571
               

               Cow position:
               chr1:68279990-68280437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chr1:75403738-75404187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 31
               

               Conread position:
               133-571
               

               Cow position:
               chr1:76207672-76207228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 57
               

               Conread position:
               133-571
               

               Cow position:
               chr1:84447524-84447971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chr1:84556821-84556372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               295
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chr1:86372195-86371746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               292
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chr1:95344609-95344176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 200
               

               Conread position:
               133-572
               

               Cow position:
               chr1:64941705-64941276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               291
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               120, 171
               

               Conread position:
               133-573
               

               Cow position:
               chr1:40059008-40059461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               298
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               120, 147
               

               Conread position:
               133-573
               

               Cow position:
               chr1:78783132-78783576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 37
               

               Conread position:
               133-574
               

               Cow position:
               chr1:1981529-1981084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 134
               

               Conread position:
               133-574
               

               Cow position:
               chr1:3137519-3137955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 6
               

               Conread position:
               133-574
               

               Cow position:
               chr1:4374756-4374308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 294
               

               Conread position:
               133-574
               

               Cow position:
               chr1:10778156-10778592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 71
               

               Conread position:
               133-574
               

               Cow position:
               chr1:11226662-11226217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 60
               

               Conread position:
               133-574
               

               Cow position:
               chr1:13548410-13547956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 58
               

               Conread position:
               133-574
               

               Cow position:
               chr1:30034133-30034562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 69
               

               Conread position:
               133-574
               

               Cow position:
               chr1:45007052-45007493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 101
               

               Conread position:
               133-574
               

               Cow position:
               chr1:56228834-56229267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 280
               

               Conread position:
               133-574
               

               Cow position:
               chr1:56718897-56719331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 93
               

               Conread position:
               133-574
               

               Cow position:
               chr1:61735860-61735406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               133-574
               

               Cow position:
               chr1:62507402-62506950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               297
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               46, 31
               

               Conread position:
               133-574
               

               Cow position:
               chr1:78091614-78092066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 265
               

               Conread position:
               133-574
               

               Cow position:
               chr1:81356121-81355676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 280
               

               Conread position:
               133-574
               

               Cow position:
               chr1:95017935-95017500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 141
               

               Conread position:
               133-574
               

               Cow position:
               chr1:95176517-95176968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 313
               

               Conread position:
               133-574
               

               Cow position:
               chr1:96478268-96478729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 67
               

               Conread position:
               133-575
               

               Cow position:
               chr1:56225054-56225499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 158
               

               Conread position:
               133-575
               

               Cow position:
               chr1:70380572-70380113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 26
               

               Conread position:
               133-575
               

               Cow position:
               chr1:70828491-70828933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               133-576
               

               Cow position:
               chr1:45289285-45288840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 19
               

               Conread position:
               133-576
               

               Cow position:
               chr1:52039219-52039669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 308
               

               Conread position:
               133-576
               

               Cow position:
               chr1:53458288-53458729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 264
               

               Conread position:
               133-576
               

               Cow position:
               chr1:61005978-61005531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 55
               

               Conread position:
               133-576
               

               Cow position:
               chr1:79844051-79844496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 272
               

               Conread position:
               133-576
               

               Cow position:
               chr1:82937002-82936566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 266
               

               Conread position:
               133-576
               

               Cow position:
               chr1:85028543-85028984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 203
               

               Conread position:
               133-576
               

               Cow position:
               chr1:90235362-90234925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 143
               

               Conread position:
               133-576
               

               Cow position:
               chr1:95499915-95499465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 305
               

               Conread position:
               133-576
               

               Cow position:
               chr1:98551303-98551751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 50
               

               Conread position:
               133-576
               

               Cow position:
               chr1:99136847-99136399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 6
               

               Conread position:
               134-271
               

               Cow position:
               chr1:29935761-29935624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 44
               

               Conread position:
               134-288
               

               Cow position:
               chr1:71818924-71818763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               134-289
               

               Cow position:
               chr1:56634455-56634617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               134-295
               

               Cow position:
               chr1:24543086-24542924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               134-296
               

               Cow position:
               chr1:45020925-45020765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               134-297
               

               Cow position:
               chr1:74085970-74085809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 53
               

               Conread position:
               134-300
               

               Cow position:
               chr1:3908817-3908650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               134-308
               

               Cow position:
               chr1:52979509-52979684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               134-310
               

               Cow position:
               chr1:85163249-85163072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               134-311
               

               Cow position:
               chr1:15144046-15143868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               134-311
               

               Cow position:
               chr1:15145857-15145679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               134-333
               

               Cow position:
               chr1:86511746-86511945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               120, 25
               

               Conread position:
               134-343
               

               Cow position:
               chr1:82568538-82568747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               119, 56
               

               Conread position:
               134-345
               

               Cow position:
               chr1:18023723-18023518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               120, 25
               

               Conread position:
               134-367
               

               Cow position:
               chr1:7836776-7836542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               119, 57
               

               Conread position:
               134-380
               

               Cow position:
               chr1:57254908-57255156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               134-419
               

               Cow position:
               chr1:72087428-72087714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               119, 272
               

               Conread position:
               134-429
               

               Cow position:
               chr1:28492176-28491869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 265
               

               Conread position:
               134-438
               

               Cow position:
               chr1:7197184-7197495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               134-450
               

               Cow position:
               chr1:61331121-61330799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               119, 310
               

               Conread position:
               134-451
               

               Cow position:
               chr1:22730347-22730659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 55
               

               Conread position:
               134-459
               

               Cow position:
               chr1:3872412-3872759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               243
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               24, 330
               

               Conread position:
               134-464
               

               Cow position:
               chr1:52593014-52592681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               122, 227
               

               Conread position:
               134-481
               

               Cow position:
               chr1:34406375-34406727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-495
               

               Cow position:
               chr1:71795376-71795743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               134-503
               

               Cow position:
               chr1:7416321-7416695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-504
               

               Cow position:
               chr1:5162485-5162096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               269
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               32, 326
               

               Conread position:
               134-504
               

               Cow position:
               chr1:99808152-99807768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 207
               

               Conread position:
               134-505
               

               Cow position:
               chr1:17008897-17008520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               134-505
               

               Cow position:
               chr1:20001170-20000798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 96
               

               Conread position:
               134-505
               

               Cow position:
               chr1:26721484-26721108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               251
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-505
               

               Cow position:
               chr1:26896240-26895873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 104
               

               Conread position:
               134-505
               

               Cow position:
               chr1:31765810-31765433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 57
               

               Conread position:
               134-505
               

               Cow position:
               chr1:44517252-44517628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               58, 145
               

               Conread position:
               134-505
               

               Cow position:
               chr1:55137655-55137273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               119, 197
               

               Conread position:
               134-505
               

               Cow position:
               chr1:56204970-56204594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-505
               

               Cow position:
               chr1:64818307-64817931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 313
               

               Conread position:
               134-505
               

               Cow position:
               chr1:67006717-67007100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               257
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               119, 142
               

               Conread position:
               134-505
               

               Cow position:
               chr1:83136778-83137154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               134-505
               

               Cow position:
               chr1:84894686-84895063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               119, 310
               

               Conread position:
               134-505
               

               Cow position:
               chr1:86544120-86543744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-505
               

               Cow position:
               chr1:88625034-88625411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               35, 310
               

               Conread position:
               134-505
               

               Cow position:
               chr1:98985340-98984962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               119, 311
               

               Conread position:
               134-506
               

               Cow position:
               chr1:62711346-62710967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 313
               

               Conread position:
               134-529
               

               Cow position:
               chr1:82502443-82502843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               119, 103
               

               Conread position:
               134-530
               

               Cow position:
               chr1:9593571-9593173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 42
               

               Conread position:
               134-530
               

               Cow position:
               chr1:40603869-40604271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 216
               

               Conread position:
               134-533
               

               Cow position:
               chr1:79015233-79015640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-542
               

               Cow position:
               chr1:52941385-52940973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               119, 144
               

               Conread position:
               134-547
               

               Cow position:
               chr1:4014351-4013926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               119, 313
               

               Conread position:
               134-547
               

               Cow position:
               chr1:21539047-21539468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               276
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-547
               

               Cow position:
               chr1:62223767-62224190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-548
               

               Cow position:
               chr1:72963251-72962831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               279
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-552
               

               Cow position:
               chr1:69997158-69997584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               119, 245
               

               Conread position:
               134-552
               

               Cow position:
               chr1:85578014-85577591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               275
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               119, 310
               

               Conread position:
               134-560
               

               Cow position:
               chr1:3340508-3340953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 324
               

               Conread position:
               134-569
               

               Cow position:
               chr1:41696644-41697082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 167
               

               Conread position:
               134-571
               

               Cow position:
               chr1:7161975-7161528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               297
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               46, 22
               

               Conread position:
               134-571
               

               Cow position:
               chr1:13451632-13452079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               297
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               119, 142
               

               Conread position:
               134-571
               

               Cow position:
               chr1:18780729-18780308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               306
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               120, 169
               

               Conread position:
               134-571
               

               Cow position:
               chr1:33040650-33041094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 305
               

               Conread position:
               134-571
               

               Cow position:
               chr1:34874819-34875267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-571
               

               Cow position:
               chr1:72624694-72625143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 312
               

               Conread position:
               134-571
               

               Cow position:
               chr1:87240100-87239654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               119, 144
               

               Conread position:
               134-571
               

               Cow position:
               chr1:91674074-91674522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 326
               

               Conread position:
               134-574
               

               Cow position:
               chr1:68446215-68445780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               305
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               47, 59
               

               Conread position:
               134-576
               

               Cow position:
               chr1:81290104-81290538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 143
               

               Conread position:
               134-576
               

               Cow position:
               chr1:96136085-96136502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               305
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               118, 134
               

               Conread position:
               135-292
               

               Cow position:
               chr1:61747575-61747418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               117, 55
               

               Conread position:
               135-300
               

               Cow position:
               chr1:101852755-101852588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 86
               

               Conread position:
               135-308
               

               Cow position:
               chr1:49357670-49357847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               135-308
               

               Cow position:
               chr1:86578575-86578748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               119, 129
               

               Conread position:
               135-313
               

               Cow position:
               chr1:71714561-71714740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               135-335
               

               Cow position:
               chr1:75249820-75250021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               117, 154
               

               Conread position:
               135-414
               

               Cow position:
               chr1:38418662-38418944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 143
               

               Conread position:
               135-437
               

               Cow position:
               chr1:91450096-91450406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               18, 75
               

               Conread position:
               135-438
               

               Cow position:
               chr1:81664656-81664344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               29, 176
               

               Conread position:
               135-445
               

               Cow position:
               chr1:31274731-31274407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               135-445
               

               Cow position:
               chr1:58195258-58194956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               38, 59
               

               Conread position:
               135-445
               

               Cow position:
               chr1:99690739-99691051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               23, 113
               

               Conread position:
               135-451
               

               Cow position:
               chr1:20950282-20950591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 119
               

               Conread position:
               135-463
               

               Cow position:
               chr1:15028265-15028592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               167, 26
               

               Conread position:
               135-468
               

               Cow position:
               chr1:21506698-21506360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               118, 56
               

               Conread position:
               135-482
               

               Cow position:
               chr1:101551034-101551394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 353
               

               Conread position:
               135-504
               

               Cow position:
               chr1:29915997-29916361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 177
               

               Conread position:
               135-504
               

               Cow position:
               chr1:78795169-78794789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 333
               

               Conread position:
               135-505
               

               Cow position:
               chr1:874223-874604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 240
               

               Conread position:
               135-505
               

               Cow position:
               chr1:9376535-9376167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               118, 307
               

               Conread position:
               135-505
               

               Cow position:
               chr1:55357702-55357331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 137
               

               Conread position:
               135-505
               

               Cow position:
               chr1:81670303-81669927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               118, 309
               

               Conread position:
               135-505
               

               Cow position:
               chr1:102350185-102349800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 284
               

               Conread position:
               135-509
               

               Cow position:
               chr1:40689288-40689667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               37, 283
               

               Conread position:
               135-533
               

               Cow position:
               chr1:14561373-14560961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               23, 321
               

               Conread position:
               135-552
               

               Cow position:
               chr1:54258156-54258573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 142
               

               Conread position:
               135-560
               

               Cow position:
               chr1:101822912-101822491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 69
               

               Conread position:
               135-562
               

               Cow position:
               chr1:97755103-97755537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               305
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               118, 25
               

               Conread position:
               135-566
               

               Cow position:
               chr1:84170086-84170497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 194
               

               Conread position:
               135-568
               

               Cow position:
               chr1:84812366-84811916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 324
               

               Conread position:
               135-568
               

               Cow position:
               chr1:101634290-101634735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 23
               

               Conread position:
               135-576
               

               Cow position:
               chr1:7739557-7739979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 142
               

               Conread position:
               136-483
               

               Cow position:
               chr1:43893507-43893857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 24
               

               Conread position:
               136-504
               

               Cow position:
               chr1:82406977-82406600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               269
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               30, 85
               

               Conread position:
               136-505
               

               Cow position:
               chr1:2952108-2951732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               117, 309
               

               Conread position:
               136-506
               

               Cow position:
               chr1:21460454-21460824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 176
               

               Conread position:
               136-576
               

               Cow position:
               chr1:57576177-57575733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 150
               

               Conread position:
               137-298
               

               Cow position:
               chr1:98612793-98612957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               28, 95
               

               Conread position:
               137-303
               

               Cow position:
               chr1:15348331-15348498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               137-306
               

               Cow position:
               chr1:89484944-89485109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               115, 54
               

               Conread position:
               137-308
               

               Cow position:
               chr1:5178277-5178104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               137-310
               

               Cow position:
               chr1:35785624-35785798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               137-317
               

               Cow position:
               chr1:68798836-68798655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               137-326
               

               Cow position:
               chr1:91869833-91869643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               137-402
               

               Cow position:
               chr1:33825421-33825684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               116, 140
               

               Conread position:
               137-405
               

               Cow position:
               chr1:61204632-61204897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               90, 178
               

               Conread position:
               137-418
               

               Cow position:
               chr1:4218520-4218235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               137-438
               

               Cow position:
               chr1:54933780-54934086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               116, 224
               

               Conread position:
               137-445
               

               Cow position:
               chr1:17876404-17876094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               68, 54
               

               Conread position:
               137-463
               

               Cow position:
               chr1:64907787-64908118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               116, 141
               

               Conread position:
               137-483
               

               Cow position:
               chr1:44094868-44094520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               190, 116
               

               Conread position:
               137-500
               

               Cow position:
               chr1:21572630-21573002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 78
               

               Conread position:
               137-503
               

               Cow position:
               chr1:19145346-19144973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               137-504
               

               Cow position:
               chr1:3969439-3969067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               248
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-504
               

               Cow position:
               chr1:99398463-99398835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-505
               

               Cow position:
               chr1:15743664-15744037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 308
               

               Conread position:
               137-505
               

               Cow position:
               chr1:29038388-29038763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 308
               

               Conread position:
               137-505
               

               Cow position:
               chr1:31817323-31816950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-505
               

               Cow position:
               chr1:36930240-36929867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               116, 141
               

               Conread position:
               137-505
               

               Cow position:
               chr1:68821278-68820905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-505
               

               Cow position:
               chr1:69670628-69670257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               116, 82
               

               Conread position:
               137-505
               

               Cow position:
               chr1:72069240-72068885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 100
               

               Conread position:
               137-505
               

               Cow position:
               chr1:73433284-73432912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               137-505
               

               Cow position:
               chr1:82491646-82492016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               116, 22
               

               Conread position:
               137-505
               

               Cow position:
               chr1:86597402-86597776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               116, 311
               

               Conread position:
               137-505
               

               Cow position:
               chr1:90392912-90392537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               116, 243
               

               Conread position:
               137-505
               

               Cow position:
               chr1:91733467-91733840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-506
               

               Cow position:
               chr1:101776252-101776630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               83, 143
               

               Conread position:
               137-530
               

               Cow position:
               chr1:100708107-100707711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 303
               

               Conread position:
               137-536
               

               Cow position:
               chr1:38688061-38688462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 254
               

               Conread position:
               137-542
               

               Cow position:
               chr1:40578363-40578778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 308
               

               Conread position:
               137-542
               

               Cow position:
               chr1:69770662-69771077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               275
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-547
               

               Cow position:
               chr1:23920111-23920531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               275
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               117, 306
               

               Conread position:
               137-547
               

               Cow position:
               chr1:77103263-77102850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               277
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               116, 141
               

               Conread position:
               137-551
               

               Cow position:
               chr1:22637806-22637424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 132
               

               Conread position:
               137-551
               

               Cow position:
               chr1:46885679-46886097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 22
               

               Conread position:
               137-562
               

               Cow position:
               chr1:24235931-24235502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 23
               

               Conread position:
               137-571
               

               Cow position:
               chr1:22261955-22262397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-571
               

               Cow position:
               chr1:32960359-32959914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-571
               

               Cow position:
               chr1:50358125-50357682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               292
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               116, 106
               

               Conread position:
               137-571
               

               Cow position:
               chr1:61281857-61282301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-571
               

               Cow position:
               chr1:97251148-97250704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               116, 166
               

               Conread position:
               138-421
               

               Cow position:
               chr1:84449473-84449756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               115, 99
               

               Conread position:
               138-490
               

               Cow position:
               chr1:52384694-52384358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               26, 31
               

               Conread position:
               138-530
               

               Cow position:
               chr1:7686050-7685651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 306
               

               Conread position:
               138-533
               

               Cow position:
               chr1:26586069-26586470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               264
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               115, 305
               

               Conread position:
               138-536
               

               Cow position:
               chr1:39913435-39913019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 105
               

               Conread position:
               138-560
               

               Cow position:
               chr1:11914284-11913866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 54
               

               Conread position:
               139-306
               

               Cow position:
               chr1:93536332-93536498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               115, 67
               

               Conread position:
               139-418
               

               Cow position:
               chr1:89077881-89078166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               139-437
               

               Cow position:
               chr1:51984837-51985136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               27, 114
               

               Conread position:
               139-505
               

               Cow position:
               chr1:17286823-17286452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               114, 304
               

               Conread position:
               139-506
               

               Cow position:
               chr1:64061924-64062296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 306
               

               Conread position:
               139-533
               

               Cow position:
               chr1:81779520-81779920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 138
               

               Conread position:
               140-252
               

               Cow position:
               chr1:3607456-3607567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               140-300
               

               Cow position:
               chr1:6305254-6305093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               140-377
               

               Cow position:
               chr1:100813196-100812951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               140-457
               

               Cow position:
               chr1:66870959-66870659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               140-477
               

               Cow position:
               chr1:15547060-15547396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 66
               

               Conread position:
               140-505
               

               Cow position:
               chr1:20389016-20389386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               115, 303
               

               Conread position:
               140-505
               

               Cow position:
               chr1:79590689-79591061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               140-505
               

               Cow position:
               chr1:100325146-100324790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               112, 36
               

               Conread position:
               140-506
               

               Cow position:
               chr1:60829590-60829224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 226
               

               Conread position:
               140-518
               

               Cow position:
               chr1:28277239-28277623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               113, 178
               

               Conread position:
               141-300
               

               Cow position:
               chr1:10881369-10881528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               113, 118
               

               Conread position:
               141-311
               

               Cow position:
               chr1:25499166-25499335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               113, 50
               

               Conread position:
               141-343
               

               Cow position:
               chr1:24561902-24561711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               141-425
               

               Cow position:
               chr1:85338719-85339007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 63
               

               Conread position:
               141-472
               

               Cow position:
               chr1:24571287-24570966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 35
               

               Conread position:
               141-506
               

               Cow position:
               chr1:82958465-82958098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 287
               

               Conread position:
               141-551
               

               Cow position:
               chr1:90836402-90836007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               113, 72
               

               Conread position:
               143-453
               

               Cow position:
               chr1:89840850-89841169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               21, 153
               

               Conread position:
               144-311
               

               Cow position:
               chr1:23999950-23999794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               110, 49
               

               Conread position:
               144-418
               

               Cow position:
               chr1:96928671-96928397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 134
               

               Conread position:
               144-448
               

               Cow position:
               chr1:35686063-35685757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               144-472
               

               Cow position:
               chr1:73756684-73757009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               144-502
               

               Cow position:
               chr1:37660849-37660494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               178, 110
               

               Conread position:
               144-505
               

               Cow position:
               chr1:61392200-61391835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 216
               

               Conread position:
               144-551
               

               Cow position:
               chr1:100400605-100400188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 134
               

               Conread position:
               144-571
               

               Cow position:
               chr1:54174532-54174967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               109, 299
               

               Conread position:
               144-571
               

               Cow position:
               chr1:57533747-57534185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 299
               

               Conread position:
               144-574
               

               Cow position:
               chr1:15477027-15476600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               109, 299
               

               Conread position:
               145-386
               

               Cow position:
               chr1:22823534-22823774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 132
               

               Conread position:
               145-406
               

               Cow position:
               chr1:26322917-26322653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 252
               

               Conread position:
               145-552
               

               Cow position:
               chr1:59790518-59790102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               108, 298
               

               Conread position:
               146-505
               

               Cow position:
               chr1:58340768-58341132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 299
               

               Conread position:
               146-538
               

               Cow position:
               chr1:40963285-40962889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 194
               

               Conread position:
               146-552
               

               Cow position:
               chr1:80336655-80336243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 336
               

               Conread position:
               147-297
               

               Cow position:
               chr1:97540372-97540219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               147-376
               

               Cow position:
               chr1:22525201-22525443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               148-329
               

               Cow position:
               chr1:43973024-43973207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               148-506
               

               Cow position:
               chr1:37694886-37694526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               240
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               105, 296
               

               Conread position:
               149-308
               

               Cow position:
               chr1:81482518-81482678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               149-505
               

               Cow position:
               chr1:71325649-71325294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               149-541
               

               Cow position:
               chr1:102519272-102519659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               274
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               20, 109
               

               Conread position:
               150-310
               

               Cow position:
               chr1:19483281-19483121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               104, 78
               

               Conread position:
               150-310
               

               Cow position:
               chr1:85825827-85825986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 19
               

               Conread position:
               151-405
               

               Cow position:
               chr1:50032247-50032500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               101, 126
               

               Conread position:
               151-505
               

               Cow position:
               chr1:82861372-82861735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               152-293
               

               Cow position:
               chr1:4400946-4401087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               100, 89
               

               Conread position:
               152-382
               

               Cow position:
               chr1:98412552-98412774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               102, 72
               

               Conread position:
               153-551
               

               Cow position:
               chr1:74930133-74929712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               101, 309
               

               Conread position:
               153-576
               

               Cow position:
               chr1:24133461-24133029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 111
               

               Conread position:
               153-576
               

               Cow position:
               chr1:48105834-48105400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 291
               

               Conread position:
               154-362
               

               Cow position:
               chr1:98702827-98703037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               75, 59
               

               Conread position:
               154-465
               

               Cow position:
               chr1:60703563-60703875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               50, 251
               

               Conread position:
               154-568
               

               Cow position:
               chr1:101915772-101916189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 173
               

               Conread position:
               157-308
               

               Cow position:
               chr1:44975354-44975503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               97, 120
               

               Conread position:
               157-505
               

               Cow position:
               chr1:91817165-91816818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 131
               

               Conread position:
               158-505
               

               Cow position:
               chr1:68276015-68276367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 50
               

               Conread position:
               158-571
               

               Cow position:
               chr1:80869715-80870141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 40
               

               Conread position:
               159-293
               

               Cow position:
               chr1:49131600-49131467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               159-307
               

               Cow position:
               chr1:16767339-16767489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               159-356
               

               Cow position:
               chr1:97089954-97090173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               159-419
               

               Cow position:
               chr1:79406471-79406210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               94, 253
               

               Conread position:
               159-433
               

               Cow position:
               chr1:41138745-41138469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 87
               

               Conread position:
               159-438
               

               Cow position:
               chr1:40170187-40170472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               159-442
               

               Cow position:
               chr1:34325409-34325127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               100, 162
               

               Conread position:
               159-472
               

               Cow position:
               chr1:20339649-20339330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               94, 285
               

               Conread position:
               159-500
               

               Cow position:
               chr1:58889685-58889346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 92
               

               Conread position:
               159-505
               

               Cow position:
               chr1:26811191-26810841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               94, 218
               

               Conread position:
               159-505
               

               Cow position:
               chr1:53374042-53374385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 239
               

               Conread position:
               159-530
               

               Cow position:
               chr1:69406975-69407351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               159-531
               

               Cow position:
               chr1:3720818-3720448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 132
               

               Conread position:
               159-541
               

               Cow position:
               chr1:63240560-63240941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 119
               

               Conread position:
               159-553
               

               Cow position:
               chr1:72304758-72304381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 8
               

               Conread position:
               159-571
               

               Cow position:
               chr1:3035382-3034973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               160-317
               

               Cow position:
               chr1:82095329-82095487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               160-498
               

               Cow position:
               chr1:81180376-81180027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               160-506
               

               Cow position:
               chr1:85151569-85151226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 31
               

               Conread position:
               160-520
               

               Cow position:
               chr1:67532692-67533055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               66, 300
               

               Conread position:
               161-331
               

               Cow position:
               chr1:96081159-96081324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               161, 93
               

               Conread position:
               161-427
               

               Cow position:
               chr1:21221344-21221073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               41, 119
               

               Conread position:
               161-514
               

               Cow position:
               chr1:94211844-94212199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 281
               

               Conread position:
               162-498
               

               Cow position:
               chr1:20125224-20125560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 29
               

               Conread position:
               163-310
               

               Cow position:
               chr1:43650047-43649912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               164-504
               

               Cow position:
               chr1:6795319-6794972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               84, 130
               

               Conread position:
               165-436
               

               Cow position:
               chr1:57541886-57541614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 129
               

               Conread position:
               165-438
               

               Cow position:
               chr1:31852121-31852399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 152
               

               Conread position:
               165-439
               

               Cow position:
               chr1:97100709-97100422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 185
               

               Conread position:
               165-443
               

               Cow position:
               chr1:54295051-54294763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               165-443
               

               Cow position:
               chr1:65144858-65144567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               165-445
               

               Cow position:
               chr1:9512500-9512231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               9, 98
               

               Conread position:
               165-446
               

               Cow position:
               chr1:32360518-32360244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               201, 89
               

               Conread position:
               165-462
               

               Cow position:
               chr1:54484673-54484980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 275
               

               Conread position:
               165-500
               

               Cow position:
               chr1:94526109-94526449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 102
               

               Conread position:
               165-503
               

               Cow position:
               chr1:50634797-50634449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 85
               

               Conread position:
               165-504
               

               Cow position:
               chr1:56073855-56073508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 288
               

               Conread position:
               165-504
               

               Cow position:
               chr1:73522522-73522195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               118, 82
               

               Conread position:
               165-505
               

               Cow position:
               chr1:31348818-31348486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 119
               

               Conread position:
               165-505
               

               Cow position:
               chr1:71045365-71045708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 280
               

               Conread position:
               165-506
               

               Cow position:
               chr1:20098978-20099320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               89, 51
               

               Conread position:
               165-514
               

               Cow position:
               chr1:31414351-31414000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 250
               

               Conread position:
               165-530
               

               Cow position:
               chr1:86696791-86696417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               8, 298
               

               Conread position:
               165-560
               

               Cow position:
               chr1:49795623-49796014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               166-355
               

               Cow position:
               chr1:4416964-4416762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               166-502
               

               Cow position:
               chr1:84602311-84601977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 138
               

               Conread position:
               166-569
               

               Cow position:
               chr1:102647654-102647252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 231
               

               Conread position:
               166-571
               

               Cow position:
               chr1:49601206-49600783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               276
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               87, 14
               

               Conread position:
               167-297
               

               Cow position:
               chr1:53041082-53040953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               87, 10
               

               Conread position:
               167-307
               

               Cow position:
               chr1:95035955-95035814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               167-360
               

               Cow position:
               chr1:99039863-99039668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               167-377
               

               Cow position:
               chr1:100791721-100791501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               167-402
               

               Cow position:
               chr1:57314820-57315057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               86, 164
               

               Conread position:
               167-469
               

               Cow position:
               chr1:5562189-5561889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               86, 51
               

               Conread position:
               167-470
               

               Cow position:
               chr1:6760401-6760099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 238
               

               Conread position:
               167-498
               

               Cow position:
               chr1:60665109-60665444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 71
               

               Conread position:
               167-571
               

               Cow position:
               chr1:55135459-55135857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               167-574
               

               Cow position:
               chr1:34159451-34159864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               167-574
               

               Cow position:
               chr1:70296883-70297307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 335
               

               Conread position:
               168-310
               

               Cow position:
               chr1:71254080-71253937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               168-398
               

               Cow position:
               chr1:42175178-42175412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 34
               

               Conread position:
               168-443
               

               Cow position:
               chr1:7583346-7583617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               9, 29
               

               Conread position:
               168-504
               

               Cow position:
               chr1:35162026-35162362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 56
               

               Conread position:
               169-506
               

               Cow position:
               chr1:3657748-3657408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               85, 109
               

               Conread position:
               169-518
               

               Cow position:
               chr1:83943729-83943377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 57
               

               Conread position:
               169-562
               

               Cow position:
               chr1:52206310-52206697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               274
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               85, 213
               

               Conread position:
               169-570
               

               Cow position:
               chr1:91039541-91039147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 154
               

               Conread position:
               169-574
               

               Cow position:
               chr1:71302761-71303150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               85, 144
               

               Conread position:
               169-576
               

               Cow position:
               chr1:91800980-91800568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 70
               

               Conread position:
               170-295
               

               Cow position:
               chr1:54477673-54477800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               170-324
               

               Cow position:
               chr1:72730530-72730685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               170-329
               

               Cow position:
               chr1:76860154-76859993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               170-335
               

               Cow position:
               chr1:53539699-53539868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               170-367
               

               Cow position:
               chr1:2994694-2994891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               85, 55
               

               Conread position:
               170-367
               

               Cow position:
               chr1:2997444-2997641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               85, 55
               

               Conread position:
               170-367
               

               Cow position:
               chr1:60280716-60280910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               84, 25
               

               Conread position:
               170-437
               

               Cow position:
               chr1:61534750-61534480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               170-438
               

               Cow position:
               chr1:72803634-72803341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               84, 148
               

               Conread position:
               170-443
               

               Cow position:
               chr1:37306643-37306357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               85, 167
               

               Conread position:
               170-443
               

               Cow position:
               chr1:72181460-72181727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               84, 104
               

               Conread position:
               170-445
               

               Cow position:
               chr1:6321823-6322106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               209
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               170-445
               

               Cow position:
               chr1:79465385-79465679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               82, 23
               

               Conread position:
               170-445
               

               Cow position:
               chr1:87967094-87966829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               170-454
               

               Cow position:
               chr1:57743374-57743104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               170-456
               

               Cow position:
               chr1:77388485-77388191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 43
               

               Conread position:
               170-459
               

               Cow position:
               chr1:67406270-67406555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               159, 8
               

               Conread position:
               170-470
               

               Cow position:
               chr1:43821996-43822294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 258
               

               Conread position:
               170-470
               

               Cow position:
               chr1:88265942-88265635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               82, 61
               

               Conread position:
               170-495
               

               Cow position:
               chr1:43285583-43285259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               156, 80
               

               Conread position:
               170-499
               

               Cow position:
               chr1:23041196-23041515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               84, 55
               

               Conread position:
               170-503
               

               Cow position:
               chr1:18224263-18223923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               84, 278
               

               Conread position:
               170-504
               

               Cow position:
               chr1:10719871-10719528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 280
               

               Conread position:
               170-505
               

               Cow position:
               chr1:53520531-53520866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 123
               

               Conread position:
               170-509
               

               Cow position:
               chr1:71938879-71938556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               158, 49
               

               Conread position:
               170-526
               

               Cow position:
               chr1:47544380-47544743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 274
               

               Conread position:
               170-535
               

               Cow position:
               chr1:69019799-69019429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               251
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               83, 19
               

               Conread position:
               170-557
               

               Cow position:
               chr1:68854801-68855177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 127
               

               Conread position:
               170-560
               

               Cow position:
               chr1:8349689-8349303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               170-564
               

               Cow position:
               chr1:7891958-7892364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               10, 274
               

               Conread position:
               170-574
               

               Cow position:
               chr1:12871396-12870980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               296
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               84, 30
               

               Conread position:
               170-574
               

               Cow position:
               chr1:53424812-53425205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 32
               

               Conread position:
               171-405
               

               Cow position:
               chr1:79632477-79632241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               171-443
               

               Cow position:
               chr1:40497198-40497473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               108, 48
               

               Conread position:
               171-454
               

               Cow position:
               chr1:52863399-52863111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               83, 162
               

               Conread position:
               171-503
               

               Cow position:
               chr1:9870233-9869896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               151, 83
               

               Conread position:
               171-505
               

               Cow position:
               chr1:37414189-37413856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               82, 191
               

               Conread position:
               171-571
               

               Cow position:
               chr1:16013191-16013603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               82, 7
               

               Conread position:
               171-571
               

               Cow position:
               chr1:69539317-69539719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 191
               

               Conread position:
               173-482
               

               Cow position:
               chr1:9444220-9443914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               23, 83
               

               Conread position:
               174-289
               

               Cow position:
               chr1:57635046-57635163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               175-561
               

               Cow position:
               chr1:22467549-22467952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 365
               

               Conread position:
               176-447
               

               Cow position:
               chr1:88911270-88910991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               134, 120
               

               Conread position:
               176-495
               

               Cow position:
               chr1:20522052-20521745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 20
               

               Conread position:
               176-504
               

               Cow position:
               chr1:7800239-7800566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               77, 60
               

               Conread position:
               176-504
               

               Cow position:
               chr1:76851106-76850773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               78, 156
               

               Conread position:
               177-323
               

               Cow position:
               chr1:22790458-22790604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               75, 86
               

               Conread position:
               177-337
               

               Cow position:
               chr1:82091778-82091939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               177-365
               

               Cow position:
               chr1:43789308-43789504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               66, 29
               

               Conread position:
               177-385
               

               Cow position:
               chr1:77383562-77383353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 66
               

               Conread position:
               177-386
               

               Cow position:
               chr1:40357627-40357836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               76, 146
               

               Conread position:
               177-425
               

               Cow position:
               chr1:102618196-102618423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               75, 12
               

               Conread position:
               177-431
               

               Cow position:
               chr1:42869525-42869277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               77, 56
               

               Conread position:
               177-443
               

               Cow position:
               chr1:35844300-35844037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 36
               

               Conread position:
               177-471
               

               Cow position:
               chr1:94232788-94233083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               77, 151
               

               Conread position:
               177-503
               

               Cow position:
               chr1:12222979-12222652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 262
               

               Conread position:
               177-504
               

               Cow position:
               chr1:7657693-7657360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               77, 91
               

               Conread position:
               177-505
               

               Cow position:
               chr1:29520238-29519904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 270
               

               Conread position:
               177-505
               

               Cow position:
               chr1:53495088-53495422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 185
               

               Conread position:
               177-506
               

               Cow position:
               chr1:13895866-13895527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               49, 75
               

               Conread position:
               177-551
               

               Cow position:
               chr1:61725487-61725109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 269
               

               Conread position:
               177-562
               

               Cow position:
               chr1:82884759-82884376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 151
               

               Conread position:
               177-570
               

               Cow position:
               chr1:99614078-99614474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 134
               

               Conread position:
               178-308
               

               Cow position:
               chr1:95971505-95971636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               178-438
               

               Cow position:
               chr1:30578233-30578490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               76, 47
               

               Conread position:
               178-445
               

               Cow position:
               chr1:52774880-52774625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               143, 71
               

               Conread position:
               178-445
               

               Cow position:
               chr1:53921119-53921390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               178-460
               

               Cow position:
               chr1:25119395-25119110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 171
               

               Conread position:
               178-468
               

               Cow position:
               chr1:98228497-98228200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               75, 269
               

               Conread position:
               178-503
               

               Cow position:
               chr1:43829609-43829277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               178-505
               

               Cow position:
               chr1:9262383-9262695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               75, 150
               

               Conread position:
               178-505
               

               Cow position:
               chr1:17435359-17435027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-505
               

               Cow position:
               chr1:55043402-55043082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 100
               

               Conread position:
               178-505
               

               Cow position:
               chr1:66752372-66752040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-505
               

               Cow position:
               chr1:69919822-69919488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               68, 268
               

               Conread position:
               178-505
               

               Cow position:
               chr1:70466201-70466532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               75, 112
               

               Conread position:
               178-505
               

               Cow position:
               chr1:98977563-98977901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               75, 269
               

               Conread position:
               178-506
               

               Cow position:
               chr1:69695381-69695037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 102
               

               Conread position:
               178-530
               

               Cow position:
               chr1:93858597-93858952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               75, 150
               

               Conread position:
               178-535
               

               Cow position:
               chr1:61638797-61639160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-542
               

               Cow position:
               chr1:20528252-20528626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-542
               

               Cow position:
               chr1:69903056-69902682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-542
               

               Cow position:
               chr1:79554444-79554825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               253
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               75, 272
               

               Conread position:
               178-547
               

               Cow position:
               chr1:56692696-56692320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-547
               

               Cow position:
               chr1:66909455-66909834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-571
               

               Cow position:
               chr1:3167439-3167047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 125
               

               Conread position:
               178-571
               

               Cow position:
               chr1:63388655-63388251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               270
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-571
               

               Cow position:
               chr1:69866576-69866176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               264
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               75, 261
               

               Conread position:
               178-571
               

               Cow position:
               chr1:70543368-70543771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               75, 264
               

               Conread position:
               178-572
               

               Cow position:
               chr1:18637999-18638404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               258
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               179-391
               

               Cow position:
               chr1:89405284-89405499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               179-443
               

               Cow position:
               chr1:84226770-84226482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               179-505
               

               Cow position:
               chr1:86113785-86113451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 199
               

               Conread position:
               179-574
               

               Cow position:
               chr1:8251-8644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 226
               

               Conread position:
               180-298
               

               Cow position:
               chr1:6961433-6961552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               180-415
               

               Cow position:
               chr1:47454075-47453845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               159, 63
               

               Conread position:
               180-503
               

               Cow position:
               chr1:80973994-80973654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               238
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               181-428
               

               Cow position:
               chr1:35742451-35742201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 108
               

               Conread position:
               181-438
               

               Cow position:
               chr1:87456580-87456839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 25
               

               Conread position:
               181-438
               

               Cow position:
               chr1:96203063-96202805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               74, 24
               

               Conread position:
               181-464
               

               Cow position:
               chr1:48083196-48083473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               146, 75
               

               Conread position:
               182-468
               

               Cow position:
               chr1:77836618-77836338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               71, 26
               

               Conread position:
               182-520
               

               Cow position:
               chr1:38479450-38479797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               71, 265
               

               Conread position:
               183-296
               

               Cow position:
               chr1:37323520-37323406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               183-428
               

               Cow position:
               chr1:79247509-79247753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               72, 40
               

               Conread position:
               183-468
               

               Cow position:
               chr1:64928973-64928684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               70, 263
               

               Conread position:
               183-498
               

               Cow position:
               chr1:56426139-56426463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 267
               

               Conread position:
               183-503
               

               Cow position:
               chr1:22745260-22745576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 12
               

               Conread position:
               183-530
               

               Cow position:
               chr1:61341526-61341180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               70, 148
               

               Conread position:
               183-571
               

               Cow position:
               chr1:1403831-1403455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 76
               

               Conread position:
               184-405
               

               Cow position:
               chr1:76938364-76938141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               184-425
               

               Cow position:
               chr1:30363290-30363529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               140, 71
               

               Conread position:
               184-454
               

               Cow position:
               chr1:28678925-28679198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               70, 60
               

               Conread position:
               184-503
               

               Cow position:
               chr1:87216085-87216411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 77
               

               Conread position:
               184-530
               

               Cow position:
               chr1:24015695-24015342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               69, 11
               

               Conread position:
               184-542
               

               Cow position:
               chr1:25183756-25184125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 340
               

               Conread position:
               184-561
               

               Cow position:
               chr1:99118022-99118387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               69, 12
               

               Conread position:
               185-443
               

               Cow position:
               chr1:70933741-70933489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               69, 10
               

               Conread position:
               185-505
               

               Cow position:
               chr1:90640666-90640985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 70
               

               Conread position:
               185-562
               

               Cow position:
               chr1:52598466-52598082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 258
               

               Conread position:
               186-443
               

               Cow position:
               chr1:65031270-65031009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               186-504
               

               Cow position:
               chr1:80764917-80764585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               68, 74
               

               Conread position:
               186-505
               

               Cow position:
               chr1:91066513-91066199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 202
               

               Conread position:
               186-552
               

               Cow position:
               chr1:15178819-15179189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               135, 66
               

               Conread position:
               187-562
               

               Cow position:
               chr1:90868802-90868424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 190
               

               Conread position:
               189-468
               

               Cow position:
               chr1:40265502-40265219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               65, 255
               

               Conread position:
               190-389
               

               Cow position:
               chr1:84456478-84456677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 78
               

               Conread position:
               190-419
               

               Cow position:
               chr1:19971187-19970966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               65, 99
               

               Conread position:
               190-424
               

               Cow position:
               chr1:82569309-82569536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               132, 64
               

               Conread position:
               190-432
               

               Cow position:
               chr1:26160503-26160255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 94
               

               Conread position:
               190-439
               

               Cow position:
               chr1:32625144-32625391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               64, 75
               

               Conread position:
               190-440
               

               Cow position:
               chr1:61104137-61103883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 139
               

               Conread position:
               190-467
               

               Cow position:
               chr1:97983723-97984014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               64, 171
               

               Conread position:
               190-505
               

               Cow position:
               chr1:21508032-21508345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 8
               

               Conread position:
               190-531
               

               Cow position:
               chr1:62963923-62964261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 12
               

               Conread position:
               190-541
               

               Cow position:
               chr1:1877668-1878023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 12
               

               Conread position:
               190-547
               

               Cow position:
               chr1:36997836-36998187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 138
               

               Conread position:
               191-300
               

               Cow position:
               chr1:79329122-79329012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               191-308
               

               Cow position:
               chr1:13978626-13978508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               191-329
               

               Cow position:
               chr1:96671207-96671347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               191-438
               

               Cow position:
               chr1:27462641-27462882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               191-503
               

               Cow position:
               chr1:44244853-44244537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               191-505
               

               Cow position:
               chr1:74283428-74283105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               33, 258
               

               Conread position:
               191-505
               

               Cow position:
               chr1:97512556-97512873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-506
               

               Cow position:
               chr1:20341058-20340741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-525
               

               Cow position:
               chr1:94664891-94665225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               63, 160
               

               Conread position:
               191-527
               

               Cow position:
               chr1:14361742-14362082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               62, 251
               

               Conread position:
               191-531
               

               Cow position:
               chr1:48639038-48638692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-535
               

               Cow position:
               chr1:59730328-59729980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               62, 250
               

               Conread position:
               191-542
               

               Cow position:
               chr1:13210836-13210482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 250
               

               Conread position:
               191-546
               

               Cow position:
               chr1:35491936-35491575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               92, 64
               

               Conread position:
               191-547
               

               Cow position:
               chr1:52374677-52375034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               62, 213
               

               Conread position:
               191-564
               

               Cow position:
               chr1:77223037-77223422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               258
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-574
               

               Cow position:
               chr1:24737366-24736974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               62, 87
               

               Conread position:
               191-574
               

               Cow position:
               chr1:73564659-73564267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-574
               

               Cow position:
               chr1:94962443-94962063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               263
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               192-402
               

               Cow position:
               chr1:51359195-51358986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               12, 71
               

               Conread position:
               192-505
               

               Cow position:
               chr1:52329886-52329574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 72
               

               Conread position:
               193-438
               

               Cow position:
               chr1:61162295-61162541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               193-505
               

               Cow position:
               chr1:70053370-70053683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               60, 249
               

               Conread position:
               194-316
               

               Cow position:
               chr1:30437095-30436970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               194-377
               

               Cow position:
               chr1:4645394-4645213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               61, 84
               

               Conread position:
               194-438
               

               Cow position:
               chr1:30098483-30098238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               194-443
               

               Cow position:
               chr1:31815074-31815327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               57, 39
               

               Conread position:
               194-460
               

               Cow position:
               chr1:8160952-8160685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               134, 55
               

               Conread position:
               194-468
               

               Cow position:
               chr1:88678248-88678528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               60, 220
               

               Conread position:
               194-498
               

               Cow position:
               chr1:100551605-100551916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 227
               

               Conread position:
               194-505
               

               Cow position:
               chr1:6278103-6278428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               59, 258
               

               Conread position:
               194-505
               

               Cow position:
               chr1:40437335-40437026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               59, 210
               

               Conread position:
               194-505
               

               Cow position:
               chr1:62582958-62582640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               59, 251
               

               Conread position:
               194-506
               

               Cow position:
               chr1:31646857-31647164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 212
               

               Conread position:
               194-574
               

               Cow position:
               chr1:68481259-68481647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               261
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               59, 177
               

               Conread position:
               196-319
               

               Cow position:
               chr1:31804972-31805096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               196-393
               

               Cow position:
               chr1:66898834-66898634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               6, 64
               

               Conread position:
               196-443
               

               Cow position:
               chr1:28325811-28326062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               50, 136
               

               Conread position:
               196-447
               

               Cow position:
               chr1:70865169-70865423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 138
               

               Conread position:
               196-500
               

               Cow position:
               chr1:66429946-66430246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 138
               

               Conread position:
               196-562
               

               Cow position:
               chr1:57247077-57247451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               10, 48
               

               Conread position:
               196-576
               

               Cow position:
               chr1:44126004-44125604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 144
               

               Conread position:
               197-307
               

               Cow position:
               chr1:27378889-27379001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               197-392
               

               Cow position:
               chr1:52539386-52539193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               197-438
               

               Cow position:
               chr1:63877148-63876900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               197-439
               

               Cow position:
               chr1:44678758-44679003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               59, 126
               

               Conread position:
               197-505
               

               Cow position:
               chr1:83982729-83982416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 31
               

               Conread position:
               197-505
               

               Cow position:
               chr1:102756771-102756475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               58, 20
               

               Conread position:
               197-564
               

               Cow position:
               chr1:58386025-58386404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               255
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               56, 246
               

               Conread position:
               199-323
               

               Cow position:
               chr1:3399023-3398898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               199-445
               

               Cow position:
               chr1:29792021-29791770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               199-487
               

               Cow position:
               chr1:65067304-65067003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               227
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               55, 167
               

               Conread position:
               199-505
               

               Cow position:
               chr1:80010872-80011183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               54, 244
               

               Conread position:
               200-360
               

               Cow position:
               chr1:45244159-45244319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               54, 99
               

               Conread position:
               200-424
               

               Cow position:
               chr1:5238261-5238030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 183
               

               Conread position:
               200-489
               

               Cow position:
               chr1:67014035-67014326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 43
               

               Conread position:
               200-505
               

               Cow position:
               chr1:100771085-100770795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 84
               

               Conread position:
               202-439
               

               Cow position:
               chr1:98741332-98741571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               202-469
               

               Cow position:
               chr1:91808743-91808472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               51, 11
               

               Conread position:
               202-574
               

               Cow position:
               chr1:34300897-34300524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 204
               

               Conread position:
               203-438
               

               Cow position:
               chr1:1263045-1263285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               203-458
               

               Cow position:
               chr1:2204583-2204324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               52, 233
               

               Conread position:
               203-500
               

               Cow position:
               chr1:100705788-100706082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 50
               

               Conread position:
               203-504
               

               Cow position:
               chr1:63503993-63504286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               203-551
               

               Cow position:
               chr1:42256858-42256497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 241
               

               Conread position:
               204-329
               

               Cow position:
               chr1:5209631-5209504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               204-332
               

               Cow position:
               chr1:97669024-97669154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               204-340
               

               Cow position:
               chr1:96371720-96371581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               204-341
               

               Cow position:
               chr1:42212090-42211953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 124
               

               Conread position:
               204-402
               

               Cow position:
               chr1:8124099-8123895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               50, 151
               

               Conread position:
               204-405
               

               Cow position:
               chr1:79078494-79078290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               47, 166
               

               Conread position:
               204-425
               

               Cow position:
               chr1:22199823-22200040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               51, 65
               

               Conread position:
               204-426
               

               Cow position:
               chr1:62614156-62614373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               123, 154
               

               Conread position:
               204-432
               

               Cow position:
               chr1:53792787-53792553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               204-438
               

               Cow position:
               chr1:13797426-13797192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 223
               

               Conread position:
               204-439
               

               Cow position:
               chr1:100095300-100095060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 130
               

               Conread position:
               204-450
               

               Cow position:
               chr1:57024160-57024408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               193, 69
               

               Conread position:
               204-454
               

               Cow position:
               chr1:98494083-98494333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               50, 74
               

               Conread position:
               204-468
               

               Cow position:
               chr1:80901573-80901310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               49, 191
               

               Conread position:
               204-505
               

               Cow position:
               chr1:48444525-48444240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 74
               

               Conread position:
               204-505
               

               Cow position:
               chr1:85652110-85651816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               55, 138
               

               Conread position:
               204-505
               

               Cow position:
               chr1:88562651-88562349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               49, 165
               

               Conread position:
               204-505
               

               Cow position:
               chr1:95712613-95712307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               49, 239
               

               Conread position:
               204-548
               

               Cow position:
               chr1:47543325-47543672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 89
               

               Conread position:
               204-574
               

               Cow position:
               chr1:96365327-96365693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 178
               

               Conread position:
               204-576
               

               Cow position:
               chr1:20204678-20205061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 241
               

               Conread position:
               205-428
               

               Cow position:
               chr1:74911377-74911609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 181
               

               Conread position:
               205-563
               

               Cow position:
               chr1:81350173-81349803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               48, 239
               

               Conread position:
               206-308
               

               Cow position:
               chr1:70426428-70426531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               206-417
               

               Cow position:
               chr1:63447346-63447128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               206-427
               

               Cow position:
               chr1:37726718-37726498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               44, 73
               

               Conread position:
               206-443
               

               Cow position:
               chr1:43244751-43244523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               157, 48
               

               Conread position:
               206-500
               

               Cow position:
               chr1:17291985-17291695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 53
               

               Conread position:
               206-504
               

               Cow position:
               chr1:77462021-77462313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 54
               

               Conread position:
               206-505
               

               Cow position:
               chr1:5623894-5623598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               47, 236
               

               Conread position:
               207-435
               

               Cow position:
               chr1:2599790-2599555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 175
               

               Conread position:
               208-504
               

               Cow position:
               chr1:21678800-21679105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               46, 88
               

               Conread position:
               209-367
               

               Cow position:
               chr1:6789033-6788877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               45, 16
               

               Conread position:
               209-405
               

               Cow position:
               chr1:42171763-42171964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               209-418
               

               Cow position:
               chr1:26186809-26186598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               44, 132
               

               Conread position:
               210-506
               

               Cow position:
               chr1:101713774-101714068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               211-505
               

               Cow position:
               chr1:95604671-95604970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               42, 135
               

               Conread position:
               211-533
               

               Cow position:
               chr1:36879938-36880265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 213
               

               Conread position:
               211-574
               

               Cow position:
               chr1:95215516-95215161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 42
               

               Conread position:
               212-438
               

               Cow position:
               chr1:20564426-20564656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               42, 66
               

               Conread position:
               212-458
               

               Cow position:
               chr1:16997740-16997490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               40, 73
               

               Conread position:
               212-504
               

               Cow position:
               chr1:97502373-97502665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               14, 80
               

               Conread position:
               212-540
               

               Cow position:
               chr1:31548499-31548829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 124
               

               Conread position:
               212-574
               

               Cow position:
               chr1:21037772-21038131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               41, 231
               

               Conread position:
               213-550
               

               Cow position:
               chr1:53594987-53595326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 199
               

               Conread position:
               215-466
               

               Cow position:
               chr1:40048108-40048365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 229
               

               Conread position:
               215-471
               

               Cow position:
               chr1:43211443-43211691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               39, 14
               

               Conread position:
               215-489
               

               Cow position:
               chr1:24909427-24909150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               39, 103
               

               Conread position:
               215-502
               

               Cow position:
               chr1:32630639-32630924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               38, 50
               

               Conread position:
               215-505
               

               Cow position:
               chr1:54597011-54596717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               40, 274
               

               Conread position:
               215-536
               

               Cow position:
               chr1:22251410-22251087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               38, 131
               

               Conread position:
               215-547
               

               Cow position:
               chr1:91084999-91084657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 228
               

               Conread position:
               215-548
               

               Cow position:
               chr1:23488846-23488509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               215-560
               

               Cow position:
               chr1:69264486-69264825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 172
               

               Conread position:
               215-574
               

               Cow position:
               chr1:81913485-81913122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               215-576
               

               Cow position:
               chr1:75935555-75935197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               38, 228
               

               Conread position:
               217-450
               

               Cow position:
               chr1:60986635-60986869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               36, 182
               

               Conread position:
               217-505
               

               Cow position:
               chr1:65530238-65529944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               36, 228
               

               Conread position:
               217-506
               

               Cow position:
               chr1:75093160-75093454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 228
               

               Conread position:
               217-540
               

               Cow position:
               chr1:61494543-61494867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               229
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               37, 227
               

               Conread position:
               217-575
               

               Cow position:
               chr1:7350204-7350578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 229
               

               Conread position:
               218-402
               

               Cow position:
               chr1:36920958-36920780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               36, 46
               

               Conread position:
               218-505
               

               Cow position:
               chr1:100740954-100741240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               36, 120
               

               Conread position:
               218-506
               

               Cow position:
               chr1:62337965-62337682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               35, 158
               

               Conread position:
               218-507
               

               Cow position:
               chr1:82226828-82227119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               35, 223
               

               Conread position:
               218-553
               

               Cow position:
               chr1:5873306-5872960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 226
               

               Conread position:
               218-560
               

               Cow position:
               chr1:95687434-95687088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               38, 111
               

               Conread position:
               219-416
               

               Cow position:
               chr1:98561767-98561965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               35, 141
               

               Conread position:
               219-430
               

               Cow position:
               chr1:29662631-29662420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               219-443
               

               Cow position:
               chr1:91051993-91051768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               9, 68
               

               Conread position:
               219-498
               

               Cow position:
               chr1:13056862-13056581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 173
               

               Conread position:
               219-503
               

               Cow position:
               chr1:19440346-19440069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               105, 35
               

               Conread position:
               219-562
               

               Cow position:
               chr1:98562828-98563179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 141
               

               Conread position:
               219-566
               

               Cow position:
               chr1:52850214-52850572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               34, 224
               

               Conread position:
               219-576
               

               Cow position:
               chr1:73960368-73960734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 228
               

               Conread position:
               220-428
               

               Cow position:
               chr1:71782457-71782249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               99, 73
               

               Conread position:
               220-556
               

               Cow position:
               chr1:15307708-15308047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               110, 33
               

               Conread position:
               222-560
               

               Cow position:
               chr1:57901066-57900726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 68
               

               Conread position:
               222-568
               

               Cow position:
               chr1:37887115-37886783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 81
               

               Conread position:
               223-444
               

               Cow position:
               chr1:42316346-42316140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               224-432
               

               Cow position:
               chr1:25262837-25263045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 113
               

               Conread position:
               224-505
               

               Cow position:
               chr1:28812643-28812924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               224-505
               

               Cow position:
               chr1:39555054-39555330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               225-396
               

               Cow position:
               chr1:58566926-58566757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               225-442
               

               Cow position:
               chr1:74040858-74040639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               30, 190
               

               Conread position:
               225-483
               

               Cow position:
               chr1:732251-732002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 179
               

               Conread position:
               225-495
               

               Cow position:
               chr1:23969361-23969093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               225-505
               

               Cow position:
               chr1:92666777-92666493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               28, 217
               

               Conread position:
               225-571
               

               Cow position:
               chr1:71280359-71280002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 220
               

               Conread position:
               227-367
               

               Cow position:
               chr1:21560631-21560769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               95, 49
               

               Conread position:
               227-425
               

               Cow position:
               chr1:72355787-72355980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 75
               

               Conread position:
               228-439
               

               Cow position:
               chr1:7022136-7022347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               26, 177
               

               Conread position:
               228-445
               

               Cow position:
               chr1:39718690-39718915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 26
               

               Conread position:
               228-448
               

               Cow position:
               chr1:21926217-21925995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               25, 216
               

               Conread position:
               228-505
               

               Cow position:
               chr1:26789679-26789961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               25, 215
               

               Conread position:
               228-505
               

               Cow position:
               chr1:72737442-72737160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 215
               

               Conread position:
               228-505
               

               Cow position:
               chr1:97513405-97513123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               25, 215
               

               Conread position:
               228-535
               

               Cow position:
               chr1:8857117-8856804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 215
               

               Conread position:
               228-552
               

               Cow position:
               chr1:85596623-85596950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 92
               

               Conread position:
               228-558
               

               Cow position:
               chr1:8884500-8884840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               25, 215
               

               Conread position:
               228-571
               

               Cow position:
               chr1:18208174-18208526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               25, 213
               

               Conread position:
               228-574
               

               Cow position:
               chr1:14743436-14743081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 50
               

               Conread position:
               229-425
               

               Cow position:
               chr1:28513448-28513250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               229-500
               

               Cow position:
               chr1:39418440-39418172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 160
               

               Conread position:
               230-497
               

               Cow position:
               chr1:99100781-99101053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               23, 213
               

               Conread position:
               230-498
               

               Cow position:
               chr1:80988028-80988292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 48
               

               Conread position:
               231-439
               

               Cow position:
               chr1:81579439-81579656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 161
               

               Conread position:
               231-471
               

               Cow position:
               chr1:50765042-50765279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               231-530
               

               Cow position:
               chr1:52754463-52754155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               5, 215
               

               Conread position:
               232-506
               

               Cow position:
               chr1:11659327-11659600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               94, 28
               

               Conread position:
               232-534
               

               Cow position:
               chr1:81673745-81674048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 141
               

               Conread position:
               232-575
               

               Cow position:
               chr1:12464972-12464634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               233-443
               

               Cow position:
               chr1:71121188-71121406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               233-462
               

               Cow position:
               chr1:61149851-61149626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               21, 61
               

               Conread position:
               233-495
               

               Cow position:
               chr1:69445056-69445308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               233-575
               

               Cow position:
               chr1:41056366-41056708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 127
               

               Conread position:
               235-506
               

               Cow position:
               chr1:79445106-79444835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               19, 76
               

               Conread position:
               235-551
               

               Cow position:
               chr1:4573217-4573525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               24, 55
               

               Conread position:
               235-574
               

               Cow position:
               chr1:95100650-95100983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               47, 17
               

               Conread position:
               236-438
               

               Cow position:
               chr1:51453984-51454193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               236-468
               

               Cow position:
               chr1:30693030-30692792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               236-505
               

               Cow position:
               chr1:82993244-82993514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               17, 203
               

               Conread position:
               236-505
               

               Cow position:
               chr1:87007095-87006821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               17, 207
               

               Conread position:
               236-506
               

               Cow position:
               chr1:16272728-16272457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               17, 205
               

               Conread position:
               236-542
               

               Cow position:
               chr1:70930495-70930804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               17, 204
               

               Conread position:
               236-553
               

               Cow position:
               chr1:22142967-22143294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 207
               

               Conread position:
               236-571
               

               Cow position:
               chr1:28274920-28275266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               17, 207
               

               Conread position:
               236-576
               

               Cow position:
               chr1:100800042-100800384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               237-481
               

               Cow position:
               chr1:77857653-77857407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               237-542
               

               Cow position:
               chr1:84282747-84283070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 216
               

               Conread position:
               237-551
               

               Cow position:
               chr1:67616224-67616532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 40
               

               Conread position:
               237-572
               

               Cow position:
               chr1:88652317-88652658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 204
               

               Conread position:
               237-574
               

               Cow position:
               chr1:21060401-21060734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 206
               

               Conread position:
               237-574
               

               Cow position:
               chr1:73561963-73561618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               237-574
               

               Cow position:
               chr1:83048513-83048175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               17, 172
               

               Conread position:
               237-576
               

               Cow position:
               chr1:21225614-21225953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               16, 153
               

               Conread position:
               238-439
               

               Cow position:
               chr1:91370789-91370589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               16, 149
               

               Conread position:
               238-505
               

               Cow position:
               chr1:91886379-91886123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               15, 114
               

               Conread position:
               238-568
               

               Cow position:
               chr1:79663977-79663650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 63
               

               Conread position:
               238-571
               

               Cow position:
               chr1:98360727-98360370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               239-445
               

               Cow position:
               chr1:61304369-61304577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               239-495
               

               Cow position:
               chr1:49839210-49839449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               239-530
               

               Cow position:
               chr1:98906613-98906317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               14, 112
               

               Conread position:
               239-564
               

               Cow position:
               chr1:5301048-5301385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 204
               

               Conread position:
               240-500
               

               Cow position:
               chr1:71257791-71257529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               82, 7
               

               Conread position:
               241-500
               

               Cow position:
               chr1:60910034-60910294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               5, 131
               

               Conread position:
               241-574
               

               Cow position:
               chr1:18937144-18936805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 66
               

               Conread position:
               243-507
               

               Cow position:
               chr1:90338287-90338012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               243-576
               

               Cow position:
               chr1:33331378-33331060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               244-506
               

               Cow position:
               chr1:46354605-46354871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               9, 202
               

               Conread position:
               244-548
               

               Cow position:
               chr1:1053281-1053583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 168
               

               Conread position:
               245-405
               

               Cow position:
               chr1:95945030-95944868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               245-458
               

               Cow position:
               chr1:97430958-97430733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               245-465
               

               Cow position:
               chr1:19657724-19657948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               8, 124
               

               Conread position:
               245-504
               

               Cow position:
               chr1:21934485-21934223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               245-505
               

               Cow position:
               chr1:22448890-22448633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 83
               

               Conread position:
               245-505
               

               Cow position:
               chr1:29627219-29626958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 15
               

               Conread position:
               245-535
               

               Cow position:
               chr1:57577422-57577718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               8, 198
               

               Conread position:
               245-563
               

               Cow position:
               chr1:68845786-68845466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               245-568
               

               Cow position:
               chr1:53622662-53622981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               245-571
               

               Cow position:
               chr1:63435109-63434780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 82
               

               Conread position:
               246-461
               

               Cow position:
               chr1:21339463-21339243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 197
               

               Conread position:
               246-505
               

               Cow position:
               chr1:40248868-40249136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               247-505
               

               Cow position:
               chr1:17399163-17399425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               6, 195
               

               Conread position:
               248-500
               

               Cow position:
               chr1:61175881-61176134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 218
               

               Conread position:
               249-505
               

               Cow position:
               chr1:71748306-71748056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               250-505
               

               Cow position:
               chr1:68217660-68217410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 199
               

               Conread position:
               251-461
               

               Cow position:
               chr1:1760145-1760359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               76, 193
               

               Conread position:
               251-500
               

               Cow position:
               chr1:94875977-94875726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               148, 181
               

               Conread position:
               251-502
               

               Cow position:
               chr1:77720526-77720284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               251-505
               

               Cow position:
               chr1:31845736-31845980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               130, 76
               

               Conread position:
               251-548
               

               Cow position:
               chr1:66138021-66138323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               149, 26
               

               Conread position:
               251-552
               

               Cow position:
               chr1:47008733-47009039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               70, 31
               

               Conread position:
               252-505
               

               Cow position:
               chr1:87888108-87888354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 25
               

               Conread position:
               252-506
               

               Cow position:
               chr1:71751559-71751305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               74, 80
               

               Conread position:
               252-562
               

               Cow position:
               chr1:20714604-20714284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               69, 190
               

               Conread position:
               252-571
               

               Cow position:
               chr1:56273648-56273318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               69, 191
               

               Conread position:
               253-465
               

               Cow position:
               chr1:78291700-78291916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 191
               

               Conread position:
               253-488
               

               Cow position:
               chr1:35170040-35170275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               166, 204
               

               Conread position:
               253-548
               

               Cow position:
               chr1:33811637-33811932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 129
               

               Conread position:
               253-574
               

               Cow position:
               chr1:83747636-83747972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 201
               

               Conread position:
               254-445
               

               Cow position:
               chr1:636120-635923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               254-576
               

               Cow position:
               chr1:81613089-81613420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 191
               

               Conread position:
               255-500
               

               Cow position:
               chr1:26688773-26688526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               255-551
               

               Cow position:
               chr1:77099835-77099542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               74, 143
               

               Conread position:
               255-560
               

               Cow position:
               chr1:98380872-98380566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 164
               

               Conread position:
               257-576
               

               Cow position:
               chr1:81911891-81911566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               65, 7
               

               Conread position:
               258-445
               

               Cow position:
               chr1:55682276-55682099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               65, 112
               

               Conread position:
               258-479
               

               Cow position:
               chr1:3076681-3076469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               69, 40
               

               Conread position:
               258-542
               

               Cow position:
               chr1:81472587-81472867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               63, 137
               

               Conread position:
               258-542
               

               Cow position:
               chr1:94256533-94256249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               258-558
               

               Cow position:
               chr1:34000613-34000922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 296
               

               Conread position:
               258-564
               

               Cow position:
               chr1:1991722-1991399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 192
               

               Conread position:
               258-571
               

               Cow position:
               chr1:98876759-98877080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               63, 121
               

               Conread position:
               259-505
               

               Cow position:
               chr1:12087197-12087447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               62, 183
               

               Conread position:
               259-571
               

               Cow position:
               chr1:21781793-21782116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               63, 184
               

               Conread position:
               260-500
               

               Cow position:
               chr1:3752233-3751990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 221
               

               Conread position:
               260-525
               

               Cow position:
               chr1:57848081-57848354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 202
               

               Conread position:
               261-575
               

               Cow position:
               chr1:25383373-25383698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 21
               

               Conread position:
               262-468
               

               Cow position:
               chr1:77704722-77704511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               66, 102
               

               Conread position:
               262-505
               

               Cow position:
               chr1:85806824-85806577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               59, 180
               

               Conread position:
               262-548
               

               Cow position:
               chr1:24528885-24528619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               262-557
               

               Cow position:
               chr1:91142443-91142144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 66
               

               Conread position:
               263-468
               

               Cow position:
               chr1:98574303-98574511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               64, 180
               

               Conread position:
               263-471
               

               Cow position:
               chr1:5990627-5990833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               264-405
               

               Cow position:
               chr1:100745441-100745297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               264-505
               

               Cow position:
               chr1:10498876-10499124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               50, 181
               

               Conread position:
               264-551
               

               Cow position:
               chr1:5409897-5409610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               264-562
               

               Cow position:
               chr1:12375090-12375398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               57, 178
               

               Conread position:
               265-437
               

               Cow position:
               chr1:51700117-51700293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               265-450
               

               Cow position:
               chr1:63311278-63311462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               57, 121
               

               Conread position:
               265-505
               

               Cow position:
               chr1:3538034-3537791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               56, 177
               

               Conread position:
               265-505
               

               Cow position:
               chr1:4027576-4027821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 226
               

               Conread position:
               266-538
               

               Cow position:
               chr1:27358657-27358936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               37, 259
               

               Conread position:
               266-550
               

               Cow position:
               chr1:78689649-78689940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               267-546
               

               Cow position:
               chr1:60907078-60907377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               268-441
               

               Cow position:
               chr1:29451592-29451766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               54, 160
               

               Conread position:
               268-462
               

               Cow position:
               chr1:70253724-70253916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 134
               

               Conread position:
               268-498
               

               Cow position:
               chr1:60491925-60492153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               60, 25
               

               Conread position:
               268-500
               

               Cow position:
               chr1:72286331-72286108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               268-505
               

               Cow position:
               chr1:46940141-46939905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               268-548
               

               Cow position:
               chr1:634909-635196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 198
               

               Conread position:
               268-562
               

               Cow position:
               chr1:1956612-1956316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 175
               

               Conread position:
               269-504
               

               Cow position:
               chr1:32341488-32341256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               94, 120
               

               Conread position:
               270-443
               

               Cow position:
               chr1:39537985-39537812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 104
               

               Conread position:
               270-505
               

               Cow position:
               chr1:42968594-42968361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               270-506
               

               Cow position:
               chr1:88943044-88943275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               60, 16
               

               Conread position:
               270-571
               

               Cow position:
               chr1:72653417-72653728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 172
               

               Conread position:
               271-471
               

               Cow position:
               chr1:78030764-78030557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               271-505
               

               Cow position:
               chr1:70796372-70796138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               70, 105
               

               Conread position:
               271-535
               

               Cow position:
               chr1:25284730-25284999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               50, 171
               

               Conread position:
               271-568
               

               Cow position:
               chr1:40599773-40600068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 54
               

               Conread position:
               272-408
               

               Cow position:
               chr1:92976919-92976783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 66
               

               Conread position:
               272-506
               

               Cow position:
               chr1:59278539-59278768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               56, 38
               

               Conread position:
               272-562
               

               Cow position:
               chr1:97954726-97954451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               102, 122
               

               Conread position:
               273-500
               

               Cow position:
               chr1:64888016-64887780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               48, 192
               

               Conread position:
               273-503
               

               Cow position:
               chr1:71779048-71779279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               62, 172
               

               Conread position:
               273-506
               

               Cow position:
               chr1:33719837-33720073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 228
               

               Conread position:
               273-506
               

               Cow position:
               chr1:49132394-49132157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               54, 171
               

               Conread position:
               273-542
               

               Cow position:
               chr1:73546192-73545914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 174
               

               Conread position:
               274-488
               

               Cow position:
               chr1:32631193-32631404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 45
               

               Conread position:
               274-541
               

               Cow position:
               chr1:43878588-43878314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               67, 169
               

               Conread position:
               274-557
               

               Cow position:
               chr1:84786495-84786774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 182
               

               Conread position:
               276-505
               

               Cow position:
               chr1:29901230-29901021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               276-564
               

               Cow position:
               chr1:6499893-6500193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 167
               

               Conread position:
               276-576
               

               Cow position:
               chr1:78810761-78811069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               15, 168
               

               Conread position:
               277-450
               

               Cow position:
               chr1:3402523-3402695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 61
               

               Conread position:
               277-493
               

               Cow position:
               chr1:55686492-55686275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               45, 62
               

               Conread position:
               277-499
               

               Cow position:
               chr1:31348186-31347968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               277-505
               

               Cow position:
               chr1:45020077-45019854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               8, 111
               

               Conread position:
               277-505
               

               Cow position:
               chr1:53369798-53370035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               50, 6
               

               Conread position:
               277-551
               

               Cow position:
               chr1:99638053-99637775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               45, 162
               

               Conread position:
               277-574
               

               Cow position:
               chr1:80631427-80631727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 70
               

               Conread position:
               277-576
               

               Cow position:
               chr1:89510205-89509890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 174
               

               Conread position:
               278-430
               

               Cow position:
               chr1:36654319-36654475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               49, 151
               

               Conread position:
               278-505
               

               Cow position:
               chr1:10742934-10742702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               43, 165
               

               Conread position:
               278-525
               

               Cow position:
               chr1:16855960-16855716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               195, 48
               

               Conread position:
               278-558
               

               Cow position:
               chr1:92437263-92436984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               52, 189
               

               Conread position:
               279-500
               

               Cow position:
               chr1:43839256-43839477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               47, 186
               

               Conread position:
               279-574
               

               Cow position:
               chr1:33997183-33996895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 126
               

               Conread position:
               280-544
               

               Cow position:
               chr1:95809769-95810043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 162
               

               Conread position:
               280-571
               

               Cow position:
               chr1:78070795-78070495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               41, 162
               

               Conread position:
               280-576
               

               Cow position:
               chr1:61742238-61741936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 107
               

               Conread position:
               281-505
               

               Cow position:
               chr1:99095096-99095316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               281-505
               

               Cow position:
               chr1:99609098-99609322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               117, 9
               

               Conread position:
               281-560
               

               Cow position:
               chr1:49433535-49433249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               17, 41
               

               Conread position:
               281-576
               

               Cow position:
               chr1:3061861-3061551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 11
               

               Conread position:
               283-388
               

               Cow position:
               chr1:82335865-82335969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               45, 15
               

               Conread position:
               283-445
               

               Cow position:
               chr1:63445322-63445490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               283-504
               

               Cow position:
               chr1:56711883-56711666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               112, 6
               

               Conread position:
               284-548
               

               Cow position:
               chr1:33701853-33702120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               10, 119
               

               Conread position:
               285-482
               

               Cow position:
               chr1:13614984-13614782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               37, 82
               

               Conread position:
               285-575
               

               Cow position:
               chr1:19482339-19482051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               42, 111
               

               Conread position:
               286-505
               

               Cow position:
               chr1:60707139-60707357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               36, 190
               

               Conread position:
               286-555
               

               Cow position:
               chr1:60546534-60546258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               42, 163
               

               Conread position:
               287-444
               

               Cow position:
               chr1:1348087-1347929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               35, 77
               

               Conread position:
               287-489
               

               Cow position:
               chr1:52488221-52488023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               287-500
               

               Cow position:
               chr1:47658092-47658296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               287-558
               

               Cow position:
               chr1:90864563-90864288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 252
               

               Conread position:
               288-445
               

               Cow position:
               chr1:37432051-37432210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               100, 112
               

               Conread position:
               288-504
               

               Cow position:
               chr1:90423348-90423131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 158
               

               Conread position:
               288-505
               

               Cow position:
               chr1:52506806-52506601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               288-526
               

               Cow position:
               chr1:20806056-20806297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               288-570
               

               Cow position:
               chr1:21954480-21954204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               34, 165
               

               Conread position:
               289-443
               

               Cow position:
               chr1:98612982-98613135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               289-444
               

               Cow position:
               chr1:30882576-30882422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               289-445
               

               Cow position:
               chr1:52819056-52819211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               145, 0
               

               Conread position:
               289-470
               

               Cow position:
               chr1:4619129-4618944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               289-495
               

               Cow position:
               chr1:11020774-11020976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 148
               

               Conread position:
               289-498
               

               Cow position:
               chr1:10064238-10064028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               117, 14
               

               Conread position:
               289-498
               

               Cow position:
               chr1:59557461-59557672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               37, 156
               

               Conread position:
               289-498
               

               Cow position:
               chr1:84116141-84116345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               289-500
               

               Cow position:
               chr1:39702573-39702770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               289-503
               

               Cow position:
               chr1:69425467-69425250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 154
               

               Conread position:
               289-504
               

               Cow position:
               chr1:6939898-6939685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               289-504
               

               Cow position:
               chr1:53039958-53039748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               289-505
               

               Cow position:
               chr1:48580869-48581085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 117
               

               Conread position:
               289-505
               

               Cow position:
               chr1:55146542-55146756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               39, 9
               

               Conread position:
               289-505
               

               Cow position:
               chr1:57297235-57297430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               151, 21
               

               Conread position:
               289-505
               

               Cow position:
               chr1:82338046-82337827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               31, 71
               

               Conread position:
               289-530
               

               Cow position:
               chr1:38712767-38713008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 13
               

               Conread position:
               289-543
               

               Cow position:
               chr1:95327414-95327159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               37, 155
               

               Conread position:
               289-554
               

               Cow position:
               chr1:22836143-22836403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               202, 13
               

               Conread position:
               289-562
               

               Cow position:
               chr1:41252664-41252390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               38, 157
               

               Conread position:
               289-562
               

               Cow position:
               chr1:71295569-71295279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               33, 53
               

               Conread position:
               289-568
               

               Cow position:
               chr1:54478061-54478352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               33, 154
               

               Conread position:
               289-574
               

               Cow position:
               chr1:45535441-45535736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               289-575
               

               Cow position:
               chr1:37322267-37321968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               19, 156
               

               Conread position:
               289-575
               

               Cow position:
               chr1:43505262-43505559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 91
               

               Conread position:
               289-576
               

               Cow position:
               chr1:197263-196974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               289-576
               

               Cow position:
               chr1:80899847-80900151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               290-425
               

               Cow position:
               chr1:33081284-33081148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               290-432
               

               Cow position:
               chr1:98023655-98023511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               290-445
               

               Cow position:
               chr1:23577638-23577477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               290-481
               

               Cow position:
               chr1:15367209-15367023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               290-482
               

               Cow position:
               chr1:70534194-70534002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               32, 173
               

               Conread position:
               290-499
               

               Cow position:
               chr1:51628762-51628551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               33, 181
               

               Conread position:
               290-499
               

               Cow position:
               chr1:82370491-82370688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               38, 102
               

               Conread position:
               290-500
               

               Cow position:
               chr1:56748330-56748543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               105, 155
               

               Conread position:
               290-503
               

               Cow position:
               chr1:29975857-29975651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               290-504
               

               Cow position:
               chr1:56408353-56408570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               38, 167
               

               Conread position:
               290-504
               

               Cow position:
               chr1:61736843-61737047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 37
               

               Conread position:
               290-504
               

               Cow position:
               chr1:74947377-74947170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 58
               

               Conread position:
               290-505
               

               Cow position:
               chr1:6941206-6941417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               290-505
               

               Cow position:
               chr1:6958619-6958830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               290-505
               

               Cow position:
               chr1:7713700-7713914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 150
               

               Conread position:
               290-505
               

               Cow position:
               chr1:34856889-34856677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               290-506
               

               Cow position:
               chr1:57264246-57264041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               290-507
               

               Cow position:
               chr1:32244659-32244444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               290-534
               

               Cow position:
               chr1:86614606-86614847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               79, 40
               

               Conread position:
               290-541
               

               Cow position:
               chr1:30413325-30413580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               36, 117
               

               Conread position:
               290-553
               

               Cow position:
               chr1:3661316-3661057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 165
               

               Conread position:
               290-553
               

               Cow position:
               chr1:100537550-100537810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               37, 156
               

               Conread position:
               290-557
               

               Cow position:
               chr1:95765349-95765086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               37, 173
               

               Conread position:
               290-572
               

               Cow position:
               chr1:6165991-6166266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 95
               

               Conread position:
               290-574
               

               Cow position:
               chr1:57635207-57635491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 107
               

               Conread position:
               290-574
               

               Cow position:
               chr1:74084449-74084159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               157, 37
               

               Conread position:
               290-574
               

               Cow position:
               chr1:81868987-81868700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               33, 114
               

               Conread position:
               290-576
               

               Cow position:
               chr1:61884655-61884944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 151
               

               Conread position:
               291-472
               

               Cow position:
               chr1:24561710-24561528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               147, 99
               

               Conread position:
               291-504
               

               Cow position:
               chr1:85783267-85783477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               174, 161
               

               Conread position:
               291-551
               

               Cow position:
               chr1:97820426-97820692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 153
               

               Conread position:
               291-552
               

               Cow position:
               chr1:76470400-76470661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               36, 90
               

               Conread position:
               292-432
               

               Cow position:
               chr1:98397472-98397333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               292-454
               

               Cow position:
               chr1:39249053-39248889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               292-458
               

               Cow position:
               chr1:97312113-97312282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               292-488
               

               Cow position:
               chr1:92642695-92642504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               292-500
               

               Cow position:
               chr1:13413769-13413978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               103, 139
               

               Conread position:
               292-500
               

               Cow position:
               chr1:64099521-64099314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               172, 139
               

               Conread position:
               292-500
               

               Cow position:
               chr1:92551393-92551186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 176
               

               Conread position:
               292-503
               

               Cow position:
               chr1:31871162-31871377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 177
               

               Conread position:
               292-505
               

               Cow position:
               chr1:79165350-79165131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 156
               

               Conread position:
               292-506
               

               Cow position:
               chr1:42555012-42555218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               292-546
               

               Cow position:
               chr1:3924051-3923800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               32, 5
               

               Conread position:
               292-551
               

               Cow position:
               chr1:16767343-16767079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 152
               

               Conread position:
               292-552
               

               Cow position:
               chr1:38544705-38544458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               35, 54
               

               Conread position:
               292-574
               

               Cow position:
               chr1:4290900-4291195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               293-444
               

               Cow position:
               chr1:33441976-33441823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               293-448
               

               Cow position:
               chr1:40292221-40292063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               111, 33
               

               Conread position:
               293-571
               

               Cow position:
               chr1:61283769-61284080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               294-446
               

               Cow position:
               chr1:24225752-24225606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               294-487
               

               Cow position:
               chr1:3757696-3757892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               294-500
               

               Cow position:
               chr1:5394126-5393922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               294-500
               

               Cow position:
               chr1:19545351-19545150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               104, 16
               

               Conread position:
               294-504
               

               Cow position:
               chr1:97620096-97619884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               75, 158
               

               Conread position:
               294-505
               

               Cow position:
               chr1:1165344-1165554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               28, 153
               

               Conread position:
               294-505
               

               Cow position:
               chr1:19998291-19998087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               294-505
               

               Cow position:
               chr1:68827161-68826951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               164
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               294-505
               

               Cow position:
               chr1:97806536-97806742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               33, 64
               

               Conread position:
               294-552
               

               Cow position:
               chr1:102826069-102825811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               61, 65
               

               Conread position:
               294-561
               

               Cow position:
               chr1:100761835-100762093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               294-562
               

               Cow position:
               chr1:29935637-29935370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               101, 152
               

               Conread position:
               294-562
               

               Cow position:
               chr1:45555106-45555383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               53, 35
               

               Conread position:
               294-576
               

               Cow position:
               chr1:38401553-38401829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               213, 55
               

               Conread position:
               295-460
               

               Cow position:
               chr1:6240361-6240519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               295-484
               

               Cow position:
               chr1:23905740-23905931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               27, 172
               

               Conread position:
               295-504
               

               Cow position:
               chr1:33986772-33986567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               105, 151
               

               Conread position:
               295-505
               

               Cow position:
               chr1:37646256-37646049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               295-506
               

               Cow position:
               chr1:77657811-77658022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               93, 143
               

               Conread position:
               295-542
               

               Cow position:
               chr1:93505017-93505275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               85, 152
               

               Conread position:
               295-557
               

               Cow position:
               chr1:24655705-24655968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 41
               

               Conread position:
               295-574
               

               Cow position:
               chr1:52994769-52995053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               104, 149
               

               Conread position:
               296-443
               

               Cow position:
               chr1:94378777-94378926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               296-472
               

               Cow position:
               chr1:67916782-67916958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               31, 36
               

               Conread position:
               296-491
               

               Cow position:
               chr1:21835694-21835885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               157
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               30, 113
               

               Conread position:
               296-500
               

               Cow position:
               chr1:64160087-64160289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               154, 113
               

               Conread position:
               296-502
               

               Cow position:
               chr1:19516660-19516454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               31, 147
               

               Conread position:
               296-503
               

               Cow position:
               chr1:57396183-57395978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 114
               

               Conread position:
               296-504
               

               Cow position:
               chr1:49131376-49131163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 172
               

               Conread position:
               296-504
               

               Cow position:
               chr1:93110879-93110668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 148
               

               Conread position:
               297-505
               

               Cow position:
               chr1:6103166-6102958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               30, 51
               

               Conread position:
               297-550
               

               Cow position:
               chr1:14379783-14379528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               32, 69
               

               Conread position:
               297-574
               

               Cow position:
               chr1:39427234-39426976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               209, 98
               

               Conread position:
               298-480
               

               Cow position:
               chr1:1916488-1916306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               29, 144
               

               Conread position:
               298-492
               

               Cow position:
               chr1:72141312-72141504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               30, 98
               

               Conread position:
               298-493
               

               Cow position:
               chr1:81363742-81363926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               298-505
               

               Cow position:
               chr1:56657789-56657986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               298-505
               

               Cow position:
               chr1:61246403-61246205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               298-542
               

               Cow position:
               chr1:95035606-95035370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               116, 28
               

               Conread position:
               298-546
               

               Cow position:
               chr1:3776866-3776619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               30, 119
               

               Conread position:
               298-548
               

               Cow position:
               chr1:96713066-96712805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               298-574
               

               Cow position:
               chr1:11770545-11770263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 146
               

               Conread position:
               298-575
               

               Cow position:
               chr1:5135943-5135680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               92, 103
               

               Conread position:
               298-576
               

               Cow position:
               chr1:75744608-75744893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 143
               

               Conread position:
               299-505
               

               Cow position:
               chr1:7442732-7442937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               299-505
               

               Cow position:
               chr1:75967185-75967385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               299-505
               

               Cow position:
               chr1:89395340-89395555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               299-515
               

               Cow position:
               chr1:1185488-1185707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               299-518
               

               Cow position:
               chr1:57637121-57637340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               26, 164
               

               Conread position:
               299-563
               

               Cow position:
               chr1:24534494-24534236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 92
               

               Conread position:
               299-568
               

               Cow position:
               chr1:37707220-37706947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 147
               

               Conread position:
               299-576
               

               Cow position:
               chr1:47233726-47233447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 97
               

               Conread position:
               300-560
               

               Cow position:
               chr1:94403966-94404229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 95
               

               Conread position:
               300-571
               

               Cow position:
               chr1:70538353-70538637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               23, 144
               

               Conread position:
               300-576
               

               Cow position:
               chr1:78857572-78857298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 142
               

               Conread position:
               301-404
               

               Cow position:
               chr1:40724517-40724622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               301-560
               

               Cow position:
               chr1:89485342-89485594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               301-567
               

               Cow position:
               chr1:69678576-69678305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               13, 145
               

               Conread position:
               302-458
               

               Cow position:
               chr1:52415207-52415047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               67, 144
               

               Conread position:
               302-472
               

               Cow position:
               chr1:42138617-42138788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               27, 130
               

               Conread position:
               302-482
               

               Cow position:
               chr1:95071738-95071915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               302-484
               

               Cow position:
               chr1:74013515-74013326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               302-498
               

               Cow position:
               chr1:14098546-14098738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               84, 140
               

               Conread position:
               302-504
               

               Cow position:
               chr1:7143097-7142895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               22, 166
               

               Conread position:
               302-504
               

               Cow position:
               chr1:28567686-28567480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               93, 25
               

               Conread position:
               302-505
               

               Cow position:
               chr1:93528442-93528652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               302-505
               

               Cow position:
               chr1:98708194-98708394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               159
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               25, 103
               

               Conread position:
               302-505
               

               Cow position:
               chr1:102469213-102469012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 116
               

               Conread position:
               302-506
               

               Cow position:
               chr1:71316992-71316787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 139
               

               Conread position:
               302-556
               

               Cow position:
               chr1:78791555-78791302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 119
               

               Conread position:
               302-562
               

               Cow position:
               chr1:36931911-36932172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               25, 100
               

               Conread position:
               302-564
               

               Cow position:
               chr1:50679534-50679268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               302-575
               

               Cow position:
               chr1:10632805-10633076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               20, 103
               

               Conread position:
               302-575
               

               Cow position:
               chr1:81563485-81563775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               21, 57
               

               Conread position:
               303-505
               

               Cow position:
               chr1:3244603-3244801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               21, 142
               

               Conread position:
               303-505
               

               Cow position:
               chr1:50931216-50931023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               303-505
               

               Cow position:
               chr1:56477348-56477541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               303-506
               

               Cow position:
               chr1:91635910-91635705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 139
               

               Conread position:
               304-467
               

               Cow position:
               chr1:26159678-26159512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 141
               

               Conread position:
               304-500
               

               Cow position:
               chr1:59650020-59650216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 70
               

               Conread position:
               304-503
               

               Cow position:
               chr1:81277447-81277251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               165, 79
               

               Conread position:
               304-505
               

               Cow position:
               chr1:63905720-63905518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               163
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               23, 70
               

               Conread position:
               304-507
               

               Cow position:
               chr1:25793686-25793479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 143
               

               Conread position:
               304-517
               

               Cow position:
               chr1:51531527-51531732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               24, 73
               

               Conread position:
               304-552
               

               Cow position:
               chr1:98594325-98594579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               116, 224
               

               Conread position:
               304-562
               

               Cow position:
               chr1:92369470-92369753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               59, 154
               

               Conread position:
               304-576
               

               Cow position:
               chr1:71253801-71253522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 138
               

               Conread position:
               305-444
               

               Cow position:
               chr1:32955009-32954870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 73
               

               Conread position:
               305-502
               

               Cow position:
               chr1:84239352-84239162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               305-505
               

               Cow position:
               chr1:71119266-71119470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               22, 62
               

               Conread position:
               305-551
               

               Cow position:
               chr1:6077649-6077905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               18, 140
               

               Conread position:
               305-552
               

               Cow position:
               chr1:44506722-44506979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               306-498
               

               Cow position:
               chr1:28068104-28068296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               22, 134
               

               Conread position:
               306-500
               

               Cow position:
               chr1:56643833-56643641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               21, 143
               

               Conread position:
               306-504
               

               Cow position:
               chr1:51836327-51836523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 85
               

               Conread position:
               306-506
               

               Cow position:
               chr1:56634852-56635050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               306-560
               

               Cow position:
               chr1:88618348-88618609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               21, 139
               

               Conread position:
               307-468
               

               Cow position:
               chr1:43649777-43649625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               150, 75
               

               Conread position:
               307-505
               

               Cow position:
               chr1:20799629-20799839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               20, 166
               

               Conread position:
               307-562
               

               Cow position:
               chr1:3962927-3962681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               20, 83
               

               Conread position:
               308-462
               

               Cow position:
               chr1:62996253-62996405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               308-552
               

               Cow position:
               chr1:95056813-95057060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               17, 133
               

               Conread position:
               310-471
               

               Cow position:
               chr1:25281916-25281756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 131
               

               Conread position:
               310-500
               

               Cow position:
               chr1:25886314-25886129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               18, 5
               

               Conread position:
               310-500
               

               Cow position:
               chr1:30504231-30504420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               84, 108
               

               Conread position:
               310-503
               

               Cow position:
               chr1:93536278-93536084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               310-504
               

               Cow position:
               chr1:8869904-8869710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               310-505
               

               Cow position:
               chr1:20287877-20288072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               83, 17
               

               Conread position:
               310-505
               

               Cow position:
               chr1:51445639-51445833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               12, 132
               

               Conread position:
               310-568
               

               Cow position:
               chr1:31235174-31234908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               16, 138
               

               Conread position:
               310-576
               

               Cow position:
               chr1:71079193-71078929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               312-450
               

               Cow position:
               chr1:71715936-71716077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 133
               

               Conread position:
               312-489
               

               Cow position:
               chr1:100512358-100512537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               312-500
               

               Cow position:
               chr1:55229746-55229933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               15, 130
               

               Conread position:
               312-548
               

               Cow position:
               chr1:51818703-51818944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               16, 90
               

               Conread position:
               312-560
               

               Cow position:
               chr1:64962893-64962652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               15, 54
               

               Conread position:
               313-469
               

               Cow position:
               chr1:65637967-65638127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 133
               

               Conread position:
               313-472
               

               Cow position:
               chr1:99222068-99221906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               313-504
               

               Cow position:
               chr1:64189265-64189450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               313-505
               

               Cow position:
               chr1:24597415-24597611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               313-505
               

               Cow position:
               chr1:40531346-40531159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               313-505
               

               Cow position:
               chr1:51769848-51770042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 55
               

               Conread position:
               313-561
               

               Cow position:
               chr1:59192882-59192628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 132
               

               Conread position:
               313-568
               

               Cow position:
               chr1:71818699-71818439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               13, 131
               

               Conread position:
               314-495
               

               Cow position:
               chr1:4539675-4539489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               10, 159
               

               Conread position:
               314-505
               

               Cow position:
               chr1:24876034-24876215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               314-570
               

               Cow position:
               chr1:102784724-102784983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               10, 101
               

               Conread position:
               315-505
               

               Cow position:
               chr1:10655243-10655438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               315-574
               

               Cow position:
               chr1:26729493-26729747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               178, 94
               

               Conread position:
               316-477
               

               Cow position:
               chr1:99543283-99543123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 125
               

               Conread position:
               317-500
               

               Cow position:
               chr1:4401914-4402093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               11, 53
               

               Conread position:
               317-530
               

               Cow position:
               chr1:53411143-53410936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               317-558
               

               Cow position:
               chr1:10942325-10942083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               5, 93
               

               Conread position:
               317-558
               

               Cow position:
               chr1:10964061-10964303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               5, 93
               

               Conread position:
               317-563
               

               Cow position:
               chr1:97611886-97611642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               6, 125
               

               Conread position:
               318-504
               

               Cow position:
               chr1:69415948-69415760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               318-505
               

               Cow position:
               chr1:15333650-15333838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               318-576
               

               Cow position:
               chr1:43389280-43389017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 103
               

               Conread position:
               319-460
               

               Cow position:
               chr1:87083435-87083578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               319-505
               

               Cow position:
               chr1:6305097-6304909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               74, 10
               

               Conread position:
               319-548
               

               Cow position:
               chr1:43358245-43358008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               319-549
               

               Cow position:
               chr1:86672460-86672223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 133
               

               Conread position:
               319-552
               

               Cow position:
               chr1:43448055-43447822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               6, 75
               

               Conread position:
               320-494
               

               Cow position:
               chr1:92010084-92010261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 124
               

               Conread position:
               320-548
               

               Cow position:
               chr1:24729069-24728837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               78, 53
               

               Conread position:
               320-558
               

               Cow position:
               chr1:3429738-3429498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               26, 73
               

               Conread position:
               321-482
               

               Cow position:
               chr1:57155630-57155471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 142
               

               Conread position:
               321-505
               

               Cow position:
               chr1:73761580-73761405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               321-505
               

               Cow position:
               chr1:78809655-78809834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               321-505
               

               Cow position:
               chr1:79278670-79278493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               321-505
               

               Cow position:
               chr1:89076864-89076675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 40
               

               Conread position:
               321-547
               

               Cow position:
               chr1:4691364-4691596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               83, 44
               

               Conread position:
               321-551
               

               Cow position:
               chr1:64804336-64804097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               321-558
               

               Cow position:
               chr1:81515011-81515244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               77, 146
               

               Conread position:
               321-562
               

               Cow position:
               chr1:70434765-70435016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               35, 129
               

               Conread position:
               321-571
               

               Cow position:
               chr1:55705482-55705220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               73, 135
               

               Conread position:
               321-571
               

               Cow position:
               chr1:62919948-62920194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               184, 43
               

               Conread position:
               321-572
               

               Cow position:
               chr1:101812503-101812247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               144, 34
               

               Conread position:
               321-576
               

               Cow position:
               chr1:89381050-89381306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               184, 48
               

               Conread position:
               322-496
               

               Cow position:
               chr1:7186560-7186740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               322-505
               

               Cow position:
               chr1:26200993-26201173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               34, 38
               

               Conread position:
               322-505
               

               Cow position:
               chr1:53540163-53540343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               62, 125
               

               Conread position:
               322-505
               

               Cow position:
               chr1:95050327-95050139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               322-552
               

               Cow position:
               chr1:4293835-4294063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               183, 87
               

               Conread position:
               323-551
               

               Cow position:
               chr1:342371-342145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               83, 119
               

               Conread position:
               324-503
               

               Cow position:
               chr1:97785958-97786132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               324-552
               

               Cow position:
               chr1:87072479-87072705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               184, 115
               

               Conread position:
               325-552
               

               Cow position:
               chr1:32013729-32013960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               325-574
               

               Cow position:
               chr1:96472205-96472468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               34, 86
               

               Conread position:
               326-506
               

               Cow position:
               chr1:71952864-71953031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               326-541
               

               Cow position:
               chr1:70422077-70422300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               73, 117
               

               Conread position:
               327-500
               

               Cow position:
               chr1:43872553-43872382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               71, 11
               

               Conread position:
               327-505
               

               Cow position:
               chr1:55194686-55194510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               118, 63
               

               Conread position:
               327-568
               

               Cow position:
               chr1:34771726-34771480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 61
               

               Conread position:
               328-505
               

               Cow position:
               chr1:52956038-52956207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               328-568
               

               Cow position:
               chr1:93043804-93044044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               27, 32
               

               Conread position:
               328-575
               

               Cow position:
               chr1:98030693-98030953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               67, 116
               

               Conread position:
               329-530
               

               Cow position:
               chr1:98461070-98461268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               66, 107
               

               Conread position:
               330-549
               

               Cow position:
               chr1:45673492-45673718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               176, 33
               

               Conread position:
               330-553
               

               Cow position:
               chr1:53671969-53671730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               69, 120
               

               Conread position:
               331-505
               

               Cow position:
               chr1:98310842-98311022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               331-552
               

               Cow position:
               chr1:98558002-98557778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               67, 169
               

               Conread position:
               331-576
               

               Cow position:
               chr1:85867376-85867620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               332-468
               

               Cow position:
               chr1:8287831-8287694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               332-505
               

               Cow position:
               chr1:86484738-86484919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               66, 113
               

               Conread position:
               332-564
               

               Cow position:
               chr1:26179032-26178800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               63, 147
               

               Conread position:
               334-574
               

               Cow position:
               chr1:68995956-68996209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               334-574
               

               Cow position:
               chr1:74956239-74955988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               65, 109
               

               Conread position:
               335-505
               

               Cow position:
               chr1:97696523-97696696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               335-574
               

               Cow position:
               chr1:77502994-77502757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               170, 72
               

               Conread position:
               339-472
               

               Cow position:
               chr1:99792601-99792736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               60, 105
               

               Conread position:
               340-505
               

               Cow position:
               chr1:41954463-41954291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               340-551
               

               Cow position:
               chr1:71643873-71643658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               59, 103
               

               Conread position:
               340-552
               

               Cow position:
               chr1:75382782-75382987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               58, 126
               

               Conread position:
               340-576
               

               Cow position:
               chr1:62291895-62291667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               215, 67
               

               Conread position:
               341-558
               

               Cow position:
               chr1:86482695-86482909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               341-574
               

               Cow position:
               chr1:63138630-63138870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               103, 193
               

               Conread position:
               342-505
               

               Cow position:
               chr1:43340830-43340658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               343-551
               

               Cow position:
               chr1:70094131-70094339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 107
               

               Conread position:
               343-568
               

               Cow position:
               chr1:98372422-98372655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               55, 147
               

               Conread position:
               343-574
               

               Cow position:
               chr1:96277261-96277023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               136, 104
               

               Conread position:
               344-557
               

               Cow position:
               chr1:4414413-4414193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               159, 96
               

               Conread position:
               347-546
               

               Cow position:
               chr1:89438138-89437938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               141, 93
               

               Conread position:
               348-489
               

               Cow position:
               chr1:28563770-28563629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               348-505
               

               Cow position:
               chr1:98619005-98619165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 10
               

               Conread position:
               348-564
               

               Cow position:
               chr1:5597400-5597189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               349-472
               

               Cow position:
               chr1:86279214-86279335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 65
               

               Conread position:
               349-505
               

               Cow position:
               chr1:49753730-49753882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               349-574
               

               Cow position:
               chr1:95654916-95654684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 96
               

               Conread position:
               350-482
               

               Cow position:
               chr1:99570664-99570534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               350-505
               

               Cow position:
               chr1:7449933-7450084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               350-552
               

               Cow position:
               chr1:81470929-81471139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               45, 95
               

               Conread position:
               350-564
               

               Cow position:
               chr1:84906267-84906052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               94, 112
               

               Conread position:
               351-505
               

               Cow position:
               chr1:51654212-51654365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               351-506
               

               Cow position:
               chr1:18697551-18697390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               352-498
               

               Cow position:
               chr1:72103649-72103796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               352-574
               

               Cow position:
               chr1:90976280-90976059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               154, 41
               

               Conread position:
               357-505
               

               Cow position:
               chr1:71227884-71228040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               357-574
               

               Cow position:
               chr1:25734661-25734897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               358-489
               

               Cow position:
               chr1:10030348-10030476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               85, 104
               

               Conread position:
               358-508
               

               Cow position:
               chr1:46030544-46030399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               358-551
               

               Cow position:
               chr1:82443648-82443449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               142, 83
               

               Conread position:
               358-552
               

               Cow position:
               chr1:83593999-83593802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               30, 162
               

               Conread position:
               358-568
               

               Cow position:
               chr1:24413248-24413474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               41, 86
               

               Conread position:
               358-572
               

               Cow position:
               chr1:677286-677499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 87
               

               Conread position:
               358-574
               

               Cow position:
               chr1:6788481-6788254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               40, 86
               

               Conread position:
               359-497
               

               Cow position:
               chr1:56413710-56413569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               45, 94
               

               Conread position:
               361-560
               

               Cow position:
               chr1:43703226-43703424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               145, 18
               

               Conread position:
               361-560
               

               Cow position:
               chr1:54156929-54156719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               361-574
               

               Cow position:
               chr1:33207063-33206852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 80
               

               Conread position:
               361-574
               

               Cow position:
               chr1:57880981-57880755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               363-505
               

               Cow position:
               chr1:59518735-59518872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               364-505
               

               Cow position:
               chr1:31608084-31607941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               364-505
               

               Cow position:
               chr1:42398382-42398240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               364-518
               

               Cow position:
               chr1:63530395-63530542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               144, 29
               

               Conread position:
               364-547
               

               Cow position:
               chr1:89082922-89083106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               36, 80
               

               Conread position:
               364-576
               

               Cow position:
               chr1:83072258-83072472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               141, 76
               

               Conread position:
               364-576
               

               Cow position:
               chr1:89497780-89497987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               139, 76
               

               Conread position:
               365-491
               

               Cow position:
               chr1:86578764-86578890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               30, 78
               

               Conread position:
               365-505
               

               Cow position:
               chr1:75933088-75933226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               365-552
               

               Cow position:
               chr1:68763866-68763678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               141, 75
               

               Conread position:
               365-568
               

               Cow position:
               chr1:99039537-99039332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               139, 75
               

               Conread position:
               368-575
               

               Cow position:
               chr1:99062103-99061892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               134, 72
               

               Conread position:
               369-505
               

               Cow position:
               chr1:65905188-65905050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               370-571
               

               Cow position:
               chr1:20667921-20667716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               136, 69
               

               Conread position:
               373-571
               

               Cow position:
               chr1:24445805-24445601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               374-505
               

               Cow position:
               chr1:42545959-42545832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               375-553
               

               Cow position:
               chr1:65318407-65318582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 20
               

               Conread position:
               375-574
               

               Cow position:
               chr1:91875085-91874883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               376-576
               

               Cow position:
               chr1:70028409-70028611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               130, 64
               

               Conread position:
               377-563
               

               Cow position:
               chr1:49317669-49317480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               130, 64
               

               Conread position:
               377-576
               

               Cow position:
               chr1:87211773-87211964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               178, 64
               

               Conread position:
               380-498
               

               Cow position:
               chr1:101280885-101280769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               382-505
               

               Cow position:
               chr1:77683190-77683311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               385-553
               

               Cow position:
               chr1:55429120-55428950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               120, 67
               

               Conread position:
               385-571
               

               Cow position:
               chr1:12978512-12978708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 59
               

               Conread position:
               385-576
               

               Cow position:
               chr1:89508392-89508580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               168, 56
               

               Conread position:
               390-505
               

               Cow position:
               chr1:51684644-51684755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               395-500
               

               Cow position:
               chr1:87095385-87095281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               395-568
               

               Cow position:
               chr1:42175570-42175744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               110, 45
               

               Conread position:
               395-576
               

               Cow position:
               chr1:85647936-85647749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               110, 46
               

               Conread position:
               398-505
               

               Cow position:
               chr1:22192612-22192718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               398-505
               

               Cow position:
               chr1:65909375-65909481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               398-576
               

               Cow position:
               chr1:86110882-86110706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               157, 43
               

               Conread position:
               398-576
               

               Cow position:
               chr1:86682714-86682529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               399-576
               

               Cow position:
               chr1:70312955-70312773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               106, 42
               

               Conread position:
               402-562
               

               Cow position:
               chr1:91023615-91023448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               103, 39
               

               Conread position:
               402-576
               

               Cow position:
               chr1:87197680-87197851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               101, 38
               

               Conread position:
               407-576
               

               Cow position:
               chr1:87440326-87440499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 33
               

               Conread position:
               408-505
               

               Cow position:
               chr1:90595696-90595599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               411-560
               

               Cow position:
               chr1:30047732-30047582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               411-574
               

               Cow position:
               chr1:89448759-89448929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               94, 30
               

               Conread position:
               425-576
               

               Cow position:
               chr1:20104144-20104297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               438-576
               

               Cow position:
               chr1:56618765-56618619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               8, 0
               
Show alignments to all cow chromosomes.
Conread position:	46-505
Cow position:	chr1:7786140-7785681 (view UCSC Genome Browser custom track)
Alignm length:	461
Alignm identity:	169
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	275, 392
Conread position:	94-535
Cow position:	chr1:64778225-64778674 (view UCSC Genome Browser custom track)
Alignm length:	451
Alignm identity:	296
Alignm E-value:	0
Alignm gaps (pig, cow):	17, 351
Conread position:	100-486
Cow position:	chr1:91978472-91978088 (view UCSC Genome Browser custom track)
Alignm length:	393
Alignm identity:	249
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	152, 35
Conread position:	106-445
Cow position:	chr1:57646228-57646574 (view UCSC Genome Browser custom track)
Alignm length:	350
Alignm identity:	245
Alignm E-value:	0
Alignm gaps (pig, cow):	23, 228
Conread position:	106-530
Cow position:	chr1:81859666-81859243 (view UCSC Genome Browser custom track)
Alignm length:	437
Alignm identity:	315
Alignm E-value:	0
Alignm gaps (pig, cow):	23, 112
Conread position:	107-437
Cow position:	chr1:29462404-29462740 (view UCSC Genome Browser custom track)
Alignm length:	345
Alignm identity:	252
Alignm E-value:	0
Alignm gaps (pig, cow):	23, 53
Conread position:	110-562
Cow position:	chr1:42874390-42873935 (view UCSC Genome Browser custom track)
Alignm length:	462
Alignm identity:	346
Alignm E-value:	0
Alignm gaps (pig, cow):	21, 10
Conread position:	112-298
Cow position:	chr1:6940992-6941186 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	151
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	18, 8
Conread position:	113-450
Cow position:	chr1:19471802-19471467 (view UCSC Genome Browser custom track)
Alignm length:	343
Alignm identity:	233
Alignm E-value:	1e-39
Alignm gaps (pig, cow):	9, 283
Conread position:	113-505
Cow position:	chr1:2075767-2075386 (view UCSC Genome Browser custom track)
Alignm length:	398
Alignm identity:	291
Alignm E-value:	0
Alignm gaps (pig, cow):	16, 35
Conread position:	114-298
Cow position:	chr1:69678817-69678633 (view UCSC Genome Browser custom track)
Alignm length:	186
Alignm identity:	139
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	138, 6
Conread position:	114-341
Cow position:	chr1:57908795-57909028 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	166
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	13, 87
Conread position:	114-436
Cow position:	chr1:102289633-102289310 (view UCSC Genome Browser custom track)
Alignm length:	325
Alignm identity:	227
Alignm E-value:	0
Alignm gaps (pig, cow):	14, 91
Conread position:	114-439
Cow position:	chr1:85865360-85865673 (view UCSC Genome Browser custom track)
Alignm length:	328
Alignm identity:	233
Alignm E-value:	5.99756e-43
Alignm gaps (pig, cow):	14, 62
Conread position:	114-548
Cow position:	chr1:96963882-96964320 (view UCSC Genome Browser custom track)
Alignm length:	444
Alignm identity:	322
Alignm E-value:	0
Alignm gaps (pig, cow):	15, 41
Conread position:	114-574
Cow position:	chr1:55163489-55163948 (view UCSC Genome Browser custom track)
Alignm length:	473
Alignm identity:	339
Alignm E-value:	0
Alignm gaps (pig, cow):	140, 22
Conread position:	115-279
Cow position:	chr1:16589277-16589443 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	123
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	14, 0
Conread position:	115-306
Cow position:	chr1:92881050-92880865 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	136
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	17, 128
Conread position:	115-310
Cow position:	chr1:25282376-25282179 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	146
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	13, 0
Conread position:	115-333
Cow position:	chr1:99792352-99792571 (view UCSC Genome Browser custom track)
Alignm length:	221
Alignm identity:	173
Alignm E-value:	0
Alignm gaps (pig, cow):	17, 102