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Cow genome map

           
Conread name:
           
Ss1.1-rret33_d17.5
        

               
Conread position:
               
99-289
               

               
Cow position:
               
chr14:33791715-33791523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
105-504
               

               
Cow position:
               
chr14:46752148-46751774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
106-437
               

               
Cow position:
               
chr14:22982389-22982042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
110-568
               

               
Cow position:
               
chr14:9020522-9020051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 166
               

               
Conread position:
               
111-505
               

               
Cow position:
               
chr14:12483820-12484205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
112-576
               

               
Cow position:
               
chr14:20640128-20640613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 341
               

               
Conread position:
               
114-287
               

               
Cow position:
               
chr14:9511301-9511132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
114-439
               

               
Cow position:
               
chr14:43792851-43792518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
14, 83
               

               
Conread position:
               
114-504
               

               
Cow position:
               
chr14:7813082-7813474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
114-505
               

               
Cow position:
               
chr14:23253920-23253530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 6
               

               
Conread position:
               
114-505
               

               
Cow position:
               
chr14:28988178-28987790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
114-552
               

               
Cow position:
               
chr14:27312926-27312465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 272
               

               
Conread position:
               
114-552
               

               
Cow position:
               
chr14:45605585-45605130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 272
               

               
Conread position:
               
115-302
               

               
Cow position:
               
chr14:34984327-34984134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
115-353
               

               
Cow position:
               
chr14:19887570-19887817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
115-388
               

               
Cow position:
               
chr14:33834579-33834305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 88
               

               
Conread position:
               
115-390
               

               
Cow position:
               
chr14:38811847-38811566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
115-391
               

               
Cow position:
               
chr14:20765842-20766109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
115-439
               

               
Cow position:
               
chr14:16525355-16525034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
13, 104
               

               
Conread position:
               
115-472
               

               
Cow position:
               
chr14:36776090-36775733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 133
               

               
Conread position:
               
115-505
               

               
Cow position:
               
chr14:44741899-44742289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 223
               

               
Conread position:
               
115-552
               

               
Cow position:
               
chr14:22583627-22583191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 275
               

               
Conread position:
               
115-562
               

               
Cow position:
               
chr14:35544029-35544486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 149
               

               
Conread position:
               
115-571
               

               
Cow position:
               
chr14:14621693-14622156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 257
               

               
Conread position:
               
115-574
               

               
Cow position:
               
chr14:24894244-24893789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 163
               

               
Conread position:
               
116-310
               

               
Cow position:
               
chr14:34370943-34371138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
130, 19
               

               
Conread position:
               
116-438
               

               
Cow position:
               
chr14:35255254-35254928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
116-442
               

               
Cow position:
               
chr14:33680501-33680831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
50, 187
               

               
Conread position:
               
116-541
               

               
Cow position:
               
chr14:23056088-23055657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 13
               

               
Conread position:
               
116-560
               

               
Cow position:
               
chr14:7270535-7270970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
117-463
               

               
Cow position:
               
chr14:13464778-13465125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 172
               

               
Conread position:
               
118-295
               

               
Cow position:
               
chr14:38379769-38379588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
118-444
               

               
Cow position:
               
chr14:31335414-31335753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 187
               

               
Conread position:
               
118-467
               

               
Cow position:
               
chr14:46654017-46654377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 197
               

               
Conread position:
               
118-472
               

               
Cow position:
               
chr14:21358046-21357675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 126
               

               
Conread position:
               
119-329
               

               
Cow position:
               
chr14:12272464-12272249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
119-419
               

               
Cow position:
               
chr14:8864324-8864020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 288
               

               
Conread position:
               
119-541
               

               
Cow position:
               
chr14:13236386-13235952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
119-547
               

               
Cow position:
               
chr14:14082250-14081809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 327
               

               
Conread position:
               
120-289
               

               
Cow position:
               
chr14:38337432-38337598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
120-298
               

               
Cow position:
               
chr14:34355000-34355188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
120-300
               

               
Cow position:
               
chr14:40999575-40999383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 183
               

               
Conread position:
               
120-300
               

               
Cow position:
               
chr14:44878278-44878462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
120-328
               

               
Cow position:
               
chr14:49411779-49411989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
120-373
               

               
Cow position:
               
chr14:11468702-11468955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 10
               

               
Conread position:
               
120-386
               

               
Cow position:
               
chr14:45046181-45046448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 242
               

               
Conread position:
               
120-425
               

               
Cow position:
               
chr14:18811631-18811951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
120-462
               

               
Cow position:
               
chr14:12519848-12520171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 194
               

               
Conread position:
               
120-471
               

               
Cow position:
               
chr14:44557360-44557710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
120-477
               

               
Cow position:
               
chr14:47507588-47507221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
120-486
               

               
Cow position:
               
chr14:21534563-21534922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 159
               

               
Conread position:
               
120-500
               

               
Cow position:
               
chr14:22909266-22909660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 303
               

               
Conread position:
               
120-500
               

               
Cow position:
               
chr14:39821655-39821262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 369
               

               
Conread position:
               
120-505
               

               
Cow position:
               
chr14:28796152-28795769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
120-505
               

               
Cow position:
               
chr14:46735800-46735399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
120-564
               

               
Cow position:
               
chr14:25682427-25681964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
120-571
               

               
Cow position:
               
chr14:20666537-20666997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 218
               

               
Conread position:
               
121-571
               

               
Cow position:
               
chr14:43046630-43046171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 171
               

               
Conread position:
               
126-505
               

               
Cow position:
               
chr14:17761956-17761574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
127, 64
               

               
Conread position:
               
127-300
               

               
Cow position:
               
chr14:23682795-23682623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
127, 162
               

               
Conread position:
               
127-352
               

               
Cow position:
               
chr14:33337712-33337949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
127-436
               

               
Cow position:
               
chr14:2037470-2037773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
127-571
               

               
Cow position:
               
chr14:8784649-8784218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 220
               

               
Conread position:
               
128-381
               

               
Cow position:
               
chr14:18199141-18199410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 161
               

               
Conread position:
               
128-445
               

               
Cow position:
               
chr14:7557967-7558277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 69
               

               
Conread position:
               
128-470
               

               
Cow position:
               
chr14:9110262-9110601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 24
               

               
Conread position:
               
128-504
               

               
Cow position:
               
chr14:1727591-1727972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 317
               

               
Conread position:
               
128-530
               

               
Cow position:
               
chr14:32583589-32583179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 317
               

               
Conread position:
               
128-542
               

               
Cow position:
               
chr14:30760681-30760275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 278
               

               
Conread position:
               
128-552
               

               
Cow position:
               
chr14:38549267-38548831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
128-556
               

               
Cow position:
               
chr14:47974455-47974025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
126, 54
               

               
Conread position:
               
128-570
               

               
Cow position:
               
chr14:41479186-41479631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 377
               

               
Conread position:
               
128-571
               

               
Cow position:
               
chr14:24417358-24416904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 222
               

               
Conread position:
               
129-275
               

               
Cow position:
               
chr14:44847390-44847542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
129-329
               

               
Cow position:
               
chr14:15999050-15999252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
129-329
               

               
Cow position:
               
chr14:18526888-18526687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
124, 62
               

               
Conread position:
               
129-329
               

               
Cow position:
               
chr14:26128733-26128531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
129-411
               

               
Cow position:
               
chr14:25673788-25674070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
124, 265
               

               
Conread position:
               
129-435
               

               
Cow position:
               
chr14:46960834-46961145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
124, 90
               

               
Conread position:
               
129-447
               

               
Cow position:
               
chr14:14442995-14442672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-481
               

               
Cow position:
               
chr14:34626229-34626586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-482
               

               
Cow position:
               
chr14:18913783-18913425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
5, 12
               

               
Conread position:
               
129-501
               

               
Cow position:
               
chr14:12991257-12991634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-504
               

               
Cow position:
               
chr14:34894993-34894613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr14:5200252-5200633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr14:15336028-15335648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
124, 298
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr14:21015813-21015432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr14:22103199-22102818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr14:22612430-22612049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr14:24896117-24896499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
124, 319
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr14:31683485-31683104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr14:34345819-34345439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 77
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr14:35016851-35017229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
124, 75
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr14:36953063-36952682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr14:40483808-40484189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr14:47486172-47485804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
124, 268
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr14:48571907-48571526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-530
               

               
Cow position:
               
chr14:46220813-46220406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-535
               

               
Cow position:
               
chr14:9033604-9033192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-535
               

               
Cow position:
               
chr14:18694288-18693877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-535
               

               
Cow position:
               
chr14:23322567-23322979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-535
               

               
Cow position:
               
chr14:30927478-30927066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 314
               

               
Conread position:
               
129-535
               

               
Cow position:
               
chr14:39327394-39327806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-542
               

               
Cow position:
               
chr14:21346697-21346274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 318
               

               
Conread position:
               
129-547
               

               
Cow position:
               
chr14:19318287-19318695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 167
               

               
Conread position:
               
129-548
               

               
Cow position:
               
chr14:24972940-24972518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-551
               

               
Cow position:
               
chr14:1802652-1803070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 105
               

               
Conread position:
               
129-552
               

               
Cow position:
               
chr14:15904654-15905086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 313
               

               
Conread position:
               
129-562
               

               
Cow position:
               
chr14:10685735-10685291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-562
               

               
Cow position:
               
chr14:10867686-10867242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-562
               

               
Cow position:
               
chr14:33077782-33077338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-566
               

               
Cow position:
               
chr14:47954151-47954599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-568
               

               
Cow position:
               
chr14:403605-404055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-571
               

               
Cow position:
               
chr14:11146708-11147161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-571
               

               
Cow position:
               
chr14:24799013-24799466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-571
               

               
Cow position:
               
chr14:30432941-30433394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
124, 149
               

               
Conread position:
               
129-571
               

               
Cow position:
               
chr14:33626931-33626463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 329
               

               
Conread position:
               
129-571
               

               
Cow position:
               
chr14:49063686-49064139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-574
               

               
Cow position:
               
chr14:30798092-30798545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 233
               

               
Conread position:
               
129-574
               

               
Cow position:
               
chr14:33289062-33289504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
130-503
               

               
Cow position:
               
chr14:13810434-13810034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 295
               

               
Conread position:
               
130-505
               

               
Cow position:
               
chr14:50588930-50589289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 168
               

               
Conread position:
               
130-549
               

               
Cow position:
               
chr14:24992283-24991868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 251
               

               
Conread position:
               
130-552
               

               
Cow position:
               
chr14:25779572-25779139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
131-287
               

               
Cow position:
               
chr14:14465804-14465960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
123, 110
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr14:47484173-47483793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 347
               

               
Conread position:
               
131-502
               

               
Cow position:
               
chr14:17651377-17651738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 66
               

               
Conread position:
               
131-505
               

               
Cow position:
               
chr14:106116-106482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
131-534
               

               
Cow position:
               
chr14:44026367-44025959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 17
               

               
Conread position:
               
132-452
               

               
Cow position:
               
chr14:10874507-10874201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
133-294
               

               
Cow position:
               
chr14:23308215-23308059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
133-295
               

               
Cow position:
               
chr14:30758759-30758592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
133-298
               

               
Cow position:
               
chr14:19851224-19851390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 67
               

               
Conread position:
               
133-307
               

               
Cow position:
               
chr14:34328906-34329085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 152
               

               
Conread position:
               
133-307
               

               
Cow position:
               
chr14:34519861-34520036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
133-308
               

               
Cow position:
               
chr14:49421278-49421452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 73
               

               
Conread position:
               
133-316
               

               
Cow position:
               
chr14:23591876-23591693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
121, 131
               

               
Conread position:
               
133-316
               

               
Cow position:
               
chr14:32471111-32470932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
174, 99
               

               
Conread position:
               
133-320
               

               
Cow position:
               
chr14:8518143-8518334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
133-321
               

               
Cow position:
               
chr14:11913701-11913512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
133-325
               

               
Cow position:
               
chr14:26160447-26160645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
33, 178
               

               
Conread position:
               
133-326
               

               
Cow position:
               
chr14:13309181-13309374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 110
               

               
Conread position:
               
133-326
               

               
Cow position:
               
chr14:41081193-41080999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
133-328
               

               
Cow position:
               
chr14:32450626-32450822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
133-328
               

               
Cow position:
               
chr14:33451748-33451551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
133-329
               

               
Cow position:
               
chr14:28350262-28350064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
133-330
               

               
Cow position:
               
chr14:5379608-5379806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
120, 139
               

               
Conread position:
               
133-334
               

               
Cow position:
               
chr14:12036086-12036282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
121, 44
               

               
Conread position:
               
133-335
               

               
Cow position:
               
chr14:46085454-46085659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
133-351
               

               
Cow position:
               
chr14:47926909-47927136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 168
               

               
Conread position:
               
133-362
               

               
Cow position:
               
chr14:20707139-20707377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
133-378
               

               
Cow position:
               
chr14:22074553-22074801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 143
               

               
Conread position:
               
133-378
               

               
Cow position:
               
chr14:40475303-40475056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
133-390
               

               
Cow position:
               
chr14:19654501-19654756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
121, 62
               

               
Conread position:
               
133-391
               

               
Cow position:
               
chr14:24113409-24113670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
41, 199
               

               
Conread position:
               
133-398
               

               
Cow position:
               
chr14:48517532-48517259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
34, 265
               

               
Conread position:
               
133-402
               

               
Cow position:
               
chr14:36424231-36424497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
120, 25
               

               
Conread position:
               
133-405
               

               
Cow position:
               
chr14:28291370-28291101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
123, 44
               

               
Conread position:
               
133-408
               

               
Cow position:
               
chr14:23645378-23645105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
133-416
               

               
Cow position:
               
chr14:29898480-29898753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
120, 26
               

               
Conread position:
               
133-417
               

               
Cow position:
               
chr14:46435360-46435646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
121, 274
               

               
Conread position:
               
133-419
               

               
Cow position:
               
chr14:16996298-16996005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 279
               

               
Conread position:
               
133-432
               

               
Cow position:
               
chr14:48606237-48605934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
133-434
               

               
Cow position:
               
chr14:39003665-39003357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 247
               

               
Conread position:
               
133-438
               

               
Cow position:
               
chr14:10541431-10541118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
133-439
               

               
Cow position:
               
chr14:29699263-29699593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
133-439
               

               
Cow position:
               
chr14:38528444-38528140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 92
               

               
Conread position:
               
133-444
               

               
Cow position:
               
chr14:14589148-14589465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
133-444
               

               
Cow position:
               
chr14:35360675-35360354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
133-445
               

               
Cow position:
               
chr14:47936333-47936012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 125
               

               
Conread position:
               
133-447
               

               
Cow position:
               
chr14:16341976-16342291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
133-447
               

               
Cow position:
               
chr14:38240036-38239727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
133-448
               

               
Cow position:
               
chr14:32574606-32574301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
133-448
               

               
Cow position:
               
chr14:45300361-45300674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
121, 145
               

               
Conread position:
               
133-453
               

               
Cow position:
               
chr14:4173956-4173631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 271
               

               
Conread position:
               
133-454
               

               
Cow position:
               
chr14:7599745-7600076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 104
               

               
Conread position:
               
133-455
               

               
Cow position:
               
chr14:9449092-9448765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
133-456
               

               
Cow position:
               
chr14:13427272-13426975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
133-461
               

               
Cow position:
               
chr14:44294068-44294401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
120, 229
               

               
Conread position:
               
133-465
               

               
Cow position:
               
chr14:46569208-46569529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
120, 63
               

               
Conread position:
               
133-468
               

               
Cow position:
               
chr14:19818843-19818508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 307
               

               
Conread position:
               
133-470
               

               
Cow position:
               
chr14:7960234-7959898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 144
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr14:22047124-22046797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
25, 174
               

               
Conread position:
               
133-481
               

               
Cow position:
               
chr14:29010710-29010358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 70
               

               
Conread position:
               
133-483
               

               
Cow position:
               
chr14:13997265-13997596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 124
               

               
Conread position:
               
133-483
               

               
Cow position:
               
chr14:27865670-27866021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 154
               

               
Conread position:
               
133-484
               

               
Cow position:
               
chr14:28566070-28565726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
133-490
               

               
Cow position:
               
chr14:1887188-1887553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 314
               

               
Conread position:
               
133-490
               

               
Cow position:
               
chr14:8884443-8884079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
120, 235
               

               
Conread position:
               
133-493
               

               
Cow position:
               
chr14:8997812-8997447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
120, 312
               

               
Conread position:
               
133-495
               

               
Cow position:
               
chr14:13860099-13859735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 309
               

               
Conread position:
               
133-496
               

               
Cow position:
               
chr14:4670435-4670064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
120, 148
               

               
Conread position:
               
133-496
               

               
Cow position:
               
chr14:45512955-45512595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
120, 136
               

               
Conread position:
               
133-498
               

               
Cow position:
               
chr14:6599484-6599851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 149
               

               
Conread position:
               
133-498
               

               
Cow position:
               
chr14:48492326-48492688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 21
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr14:10907193-10906815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 235
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr14:25385418-25385786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 124
               

               
Conread position:
               
133-502
               

               
Cow position:
               
chr14:28138026-28137652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 312
               

               
Conread position:
               
133-502
               

               
Cow position:
               
chr14:34760432-34760801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
65, 278
               

               
Conread position:
               
133-502
               

               
Cow position:
               
chr14:38865759-38865383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
120, 312
               

               
Conread position:
               
133-502
               

               
Cow position:
               
chr14:44368124-44368498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-503
               

               
Cow position:
               
chr14:5491849-5491472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
72, 314
               

               
Conread position:
               
133-503
               

               
Cow position:
               
chr14:19957441-19957811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 332
               

               
Conread position:
               
133-503
               

               
Cow position:
               
chr14:34906976-34907351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 314
               

               
Conread position:
               
133-503
               

               
Cow position:
               
chr14:39433813-39434163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 130
               

               
Conread position:
               
133-503
               

               
Cow position:
               
chr14:44237232-44237609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
133-504
               

               
Cow position:
               
chr14:7528759-7529134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 226
               

               
Conread position:
               
133-504
               

               
Cow position:
               
chr14:20069049-20069420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
133-504
               

               
Cow position:
               
chr14:39519174-39518790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:193599-193970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 273
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:5501684-5502067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:6418842-6419209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 184
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:8754795-8754423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 108
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:8985124-8985501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:10710977-10711354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:12243920-12244287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 121
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:12858057-12857680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:13297158-13296789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 57
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:13618998-13618624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
120, 273
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:14317355-14316977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
32, 299
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:14326639-14327014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:14764413-14764790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:15271814-15271439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 206
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:17094184-17094561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
120, 314
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:17756027-17755655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 272
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:20786832-20787213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 333
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:27394669-27395046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 314
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:33538460-33538828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 179
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:36880204-36879847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:38143666-38144014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 151
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:38436468-38436841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
119, 57
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:41756725-41756354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 6
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:44382730-44383109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 211
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:45279407-45279781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 281
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:48251006-48250629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 312
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:48523882-48524259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:49995096-49994719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 312
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr14:50114792-50115168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 92
               

               
Conread position:
               
133-506
               

               
Cow position:
               
chr14:2269931-2270300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
133-506
               

               
Cow position:
               
chr14:22026329-22025949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 331
               

               
Conread position:
               
133-506
               

               
Cow position:
               
chr14:27848667-27848294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 58
               

               
Conread position:
               
133-506
               

               
Cow position:
               
chr14:40346710-40347067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 241
               

               
Conread position:
               
133-506
               

               
Cow position:
               
chr14:46178795-46179174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
133-506
               

               
Cow position:
               
chr14:46224136-46223763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
216, 122
               

               
Conread position:
               
133-507
               

               
Cow position:
               
chr14:12546121-12546493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 130
               

               
Conread position:
               
133-512
               

               
Cow position:
               
chr14:36167403-36167030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 256
               

               
Conread position:
               
133-518
               

               
Cow position:
               
chr14:37156338-37155950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 280
               

               
Conread position:
               
133-519
               

               
Cow position:
               
chr14:30592807-30592419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 44
               

               
Conread position:
               
133-524
               

               
Cow position:
               
chr14:11473874-11473474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 312
               

               
Conread position:
               
133-524
               

               
Cow position:
               
chr14:39301908-39302289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
133-525
               

               
Cow position:
               
chr14:34675549-34675948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
133-526
               

               
Cow position:
               
chr14:12834289-12834689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 302
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr14:5532790-5533196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 313
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr14:7476454-7476855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 139
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr14:13768844-13768439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 329
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr14:17690576-17690978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 145
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr14:28992902-28992497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 312
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr14:34667112-34666708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr14:39710612-39711016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 311
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr14:45604034-45603626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr14:50068812-50068411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
120, 313
               

               
Conread position:
               
133-533
               

               
Cow position:
               
chr14:21597145-21597547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
120, 179
               

               
Conread position:
               
133-534
               

               
Cow position:
               
chr14:22689419-22689003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 289
               

               
Conread position:
               
133-535
               

               
Cow position:
               
chr14:17527014-17527422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-535
               

               
Cow position:
               
chr14:24612717-24613125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-535
               

               
Cow position:
               
chr14:31156276-31156684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-535
               

               
Cow position:
               
chr14:37227644-37228048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 45
               

               
Conread position:
               
133-536
               

               
Cow position:
               
chr14:38016982-38017370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
45, 86
               

               
Conread position:
               
133-540
               

               
Cow position:
               
chr14:27039940-27039532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 311
               

               
Conread position:
               
133-541
               

               
Cow position:
               
chr14:18940843-18941241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 125
               

               
Conread position:
               
133-541
               

               
Cow position:
               
chr14:48164619-48164210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
32, 147
               

               
Conread position:
               
133-542
               

               
Cow position:
               
chr14:2875480-2875075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
120, 52
               

               
Conread position:
               
133-542
               

               
Cow position:
               
chr14:12739598-12739178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 157
               

               
Conread position:
               
133-542
               

               
Cow position:
               
chr14:35588621-35588220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 141
               

               
Conread position:
               
133-542
               

               
Cow position:
               
chr14:38391696-38392110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
120, 312
               

               
Conread position:
               
133-542
               

               
Cow position:
               
chr14:46124791-46125212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 319
               

               
Conread position:
               
133-546
               

               
Cow position:
               
chr14:10912515-10912918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 168
               

               
Conread position:
               
133-546
               

               
Cow position:
               
chr14:23089893-23090331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
78, 330
               

               
Conread position:
               
133-547
               

               
Cow position:
               
chr14:11508891-11509315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-547
               

               
Cow position:
               
chr14:13582306-13582705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
119, 26
               

               
Conread position:
               
133-547
               

               
Cow position:
               
chr14:20562758-20563180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 312
               

               
Conread position:
               
133-547
               

               
Cow position:
               
chr14:47427510-47427086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-548
               

               
Cow position:
               
chr14:21964584-21964167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 158
               

               
Conread position:
               
133-548
               

               
Cow position:
               
chr14:40462039-40461626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 113
               

               
Conread position:
               
133-548
               

               
Cow position:
               
chr14:47584181-47584611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
133-548
               

               
Cow position:
               
chr14:47609138-47609536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 84
               

               
Conread position:
               
133-550
               

               
Cow position:
               
chr14:46075053-46074628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
133-551
               

               
Cow position:
               
chr14:46489789-46490216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 71
               

               
Conread position:
               
133-552
               

               
Cow position:
               
chr14:16306304-16305881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 228
               

               
Conread position:
               
133-552
               

               
Cow position:
               
chr14:22381086-22381511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 322
               

               
Conread position:
               
133-552
               

               
Cow position:
               
chr14:40230170-40230598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
133-552
               

               
Cow position:
               
chr14:48495681-48496105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
133-558
               

               
Cow position:
               
chr14:18238627-18238175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
32, 259
               

               
Conread position:
               
133-558
               

               
Cow position:
               
chr14:38295824-38296245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 145
               

               
Conread position:
               
133-561
               

               
Cow position:
               
chr14:28708495-28708051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 188
               

               
Conread position:
               
133-562
               

               
Cow position:
               
chr14:7647564-7647988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 252
               

               
Conread position:
               
133-562
               

               
Cow position:
               
chr14:24581406-24580959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 324
               

               
Conread position:
               
133-563
               

               
Cow position:
               
chr14:35420292-35420732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 151
               

               
Conread position:
               
133-563
               

               
Cow position:
               
chr14:35650734-35651161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 219
               

               
Conread position:
               
133-563
               

               
Cow position:
               
chr14:41454065-41454485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 180
               

               
Conread position:
               
133-568
               

               
Cow position:
               
chr14:8488660-8488209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
133-568
               

               
Cow position:
               
chr14:27792002-27791569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 317
               

               
Conread position:
               
133-569
               

               
Cow position:
               
chr14:13385841-13385395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 347
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr14:19550934-19551383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr14:30581014-30580567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
120, 308
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr14:32277069-32276620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
120, 213
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr14:32500733-32501181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 310
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr14:34168749-34169193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
188, 119
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr14:34630068-34630517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr14:35338004-35338451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 308
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr14:38461065-38461514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr14:41324971-41325425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 186
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr14:47871364-47870915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr14:445848-445425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr14:8982109-8982547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 42
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr14:21201360-21201805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 376
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr14:25403479-25403916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 106
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr14:34199365-34199824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 155
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr14:36554690-36555136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 63
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr14:41180253-41180693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 110
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr14:41471500-41471950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 263
               

               
Conread position:
               
133-576
               

               
Cow position:
               
chr14:19189506-19189061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 167
               

               
Conread position:
               
133-576
               

               
Cow position:
               
chr14:39779214-39778769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
133-576
               

               
Cow position:
               
chr14:41749305-41749742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 44
               

               
Conread position:
               
133-576
               

               
Cow position:
               
chr14:42596846-42596400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 216
               

               
Conread position:
               
134-293
               

               
Cow position:
               
chr14:20827428-20827261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
134-297
               

               
Cow position:
               
chr14:4991728-4991558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
134-299
               

               
Cow position:
               
chr14:36289299-36289465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
134-326
               

               
Cow position:
               
chr14:22863158-22863351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
134-376
               

               
Cow position:
               
chr14:20827155-20826914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
118, 143
               

               
Conread position:
               
134-398
               

               
Cow position:
               
chr14:8396328-8396062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
134-398
               

               
Cow position:
               
chr14:9483399-9483665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
134-414
               

               
Cow position:
               
chr14:27051524-27051240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
42, 175
               

               
Conread position:
               
134-419
               

               
Cow position:
               
chr14:2289699-2289985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
119, 270
               

               
Conread position:
               
134-423
               

               
Cow position:
               
chr14:38539181-38538895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
134-445
               

               
Cow position:
               
chr14:14245791-14245481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
134-447
               

               
Cow position:
               
chr14:35001737-35002050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
42, 198
               

               
Conread position:
               
134-472
               

               
Cow position:
               
chr14:39617919-39618248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 78
               

               
Conread position:
               
134-503
               

               
Cow position:
               
chr14:16237040-16237406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 184
               

               
Conread position:
               
134-504
               

               
Cow position:
               
chr14:29973126-29972748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 145
               

               
Conread position:
               
134-505
               

               
Cow position:
               
chr14:17485702-17485326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
119, 309
               

               
Conread position:
               
134-505
               

               
Cow position:
               
chr14:28378828-28378455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 143
               

               
Conread position:
               
134-530
               

               
Cow position:
               
chr14:39891733-39891329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 311
               

               
Conread position:
               
134-535
               

               
Cow position:
               
chr14:15713022-15712615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
119, 311
               

               
Conread position:
               
134-551
               

               
Cow position:
               
chr14:17899939-17899524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 164
               

               
Conread position:
               
134-562
               

               
Cow position:
               
chr14:15054528-15054960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 60
               

               
Conread position:
               
134-563
               

               
Cow position:
               
chr14:33462622-33462193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 144
               

               
Conread position:
               
134-563
               

               
Cow position:
               
chr14:49544069-49543640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 72
               

               
Conread position:
               
134-568
               

               
Cow position:
               
chr14:13006971-13006529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 202
               

               
Conread position:
               
134-571
               

               
Cow position:
               
chr14:748219-747775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
119, 307
               

               
Conread position:
               
134-571
               

               
Cow position:
               
chr14:21762555-21763001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
134-571
               

               
Cow position:
               
chr14:46848594-46848146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 309
               

               
Conread position:
               
134-574
               

               
Cow position:
               
chr14:19533642-19533191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 310
               

               
Conread position:
               
134-576
               

               
Cow position:
               
chr14:39774589-39775035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 155
               

               
Conread position:
               
135-292
               

               
Cow position:
               
chr14:24923251-24923406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 143
               

               
Conread position:
               
135-418
               

               
Cow position:
               
chr14:46533140-46532852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
118, 56
               

               
Conread position:
               
135-439
               

               
Cow position:
               
chr14:25885967-25885659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
135-443
               

               
Cow position:
               
chr14:19512922-19513221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
135-445
               

               
Cow position:
               
chr14:46549621-46549932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
128, 98
               

               
Conread position:
               
135-471
               

               
Cow position:
               
chr14:42785408-42785075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 255
               

               
Conread position:
               
135-498
               

               
Cow position:
               
chr14:31734390-31734750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 142
               

               
Conread position:
               
135-505
               

               
Cow position:
               
chr14:49590352-49589979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
118, 308
               

               
Conread position:
               
135-507
               

               
Cow position:
               
chr14:8495611-8495245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 96
               

               
Conread position:
               
135-535
               

               
Cow position:
               
chr14:13473974-13473579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
60, 271
               

               
Conread position:
               
135-548
               

               
Cow position:
               
chr14:11982119-11981683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
135-571
               

               
Cow position:
               
chr14:20600852-20600409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
136-504
               

               
Cow position:
               
chr14:35048038-35047671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 148
               

               
Conread position:
               
136-505
               

               
Cow position:
               
chr14:35382048-35381685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 5
               

               
Conread position:
               
137-308
               

               
Cow position:
               
chr14:35027892-35027720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
137-308
               

               
Cow position:
               
chr14:39937582-39937755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
137-328
               

               
Cow position:
               
chr14:30453084-30452891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
137-333
               

               
Cow position:
               
chr14:46987865-46987669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
116, 106
               

               
Conread position:
               
137-413
               

               
Cow position:
               
chr14:13723136-13723414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 147
               

               
Conread position:
               
137-429
               

               
Cow position:
               
chr14:5519561-5519273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
115, 122
               

               
Conread position:
               
137-438
               

               
Cow position:
               
chr14:45996128-45995826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
116, 226
               

               
Conread position:
               
137-493
               

               
Cow position:
               
chr14:15781464-15781830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 313
               

               
Conread position:
               
137-494
               

               
Cow position:
               
chr14:25695832-25695486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 40
               

               
Conread position:
               
137-497
               

               
Cow position:
               
chr14:19350796-19350418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
29, 322
               

               
Conread position:
               
137-503
               

               
Cow position:
               
chr14:9875849-9875490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
137-504
               

               
Cow position:
               
chr14:21018581-21018208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 113
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr14:10349406-10349037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
116, 141
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr14:12903773-12904143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 31
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr14:18191458-18191831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
116, 306
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr14:18904139-18904515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr14:29043949-29043577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
116, 306
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr14:42586380-42586752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
190, 305
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr14:50363260-50362890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 192
               

               
Conread position:
               
137-506
               

               
Cow position:
               
chr14:43561620-43561996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 54
               

               
Conread position:
               
137-526
               

               
Cow position:
               
chr14:42620851-42620470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
137-533
               

               
Cow position:
               
chr14:5645863-5646267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 306
               

               
Conread position:
               
137-536
               

               
Cow position:
               
chr14:6530416-6530025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 148
               

               
Conread position:
               
137-542
               

               
Cow position:
               
chr14:31400053-31399629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 323
               

               
Conread position:
               
137-542
               

               
Cow position:
               
chr14:33827170-33826757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 54
               

               
Conread position:
               
137-551
               

               
Cow position:
               
chr14:30664469-30664044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 279
               

               
Conread position:
               
137-552
               

               
Cow position:
               
chr14:37883454-37883874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
137-562
               

               
Cow position:
               
chr14:44121806-44121378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
116, 148
               

               
Conread position:
               
137-566
               

               
Cow position:
               
chr14:40969608-40970047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
116, 306
               

               
Conread position:
               
137-570
               

               
Cow position:
               
chr14:32371280-32371718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
138-500
               

               
Cow position:
               
chr14:50027670-50027320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 142
               

               
Conread position:
               
138-504
               

               
Cow position:
               
chr14:10091021-10090647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 114
               

               
Conread position:
               
138-505
               

               
Cow position:
               
chr14:45738874-45738503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
138-563
               

               
Cow position:
               
chr14:34124716-34125146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 14
               

               
Conread position:
               
139-308
               

               
Cow position:
               
chr14:48828676-48828846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
139-354
               

               
Cow position:
               
chr14:16353025-16352791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
139-439
               

               
Cow position:
               
chr14:21048036-21047724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 281
               

               
Conread position:
               
139-502
               

               
Cow position:
               
chr14:21087389-21087024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
139-504
               

               
Cow position:
               
chr14:26116525-26116156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 251
               

               
Conread position:
               
139-505
               

               
Cow position:
               
chr14:20455092-20454721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
114, 304
               

               
Conread position:
               
139-505
               

               
Cow position:
               
chr14:45085382-45085746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
114, 205
               

               
Conread position:
               
139-547
               

               
Cow position:
               
chr14:35266554-35266966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 50
               

               
Conread position:
               
139-551
               

               
Cow position:
               
chr14:28090513-28090932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 158
               

               
Conread position:
               
141-289
               

               
Cow position:
               
chr14:48740397-48740547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
141-333
               

               
Cow position:
               
chr14:26859288-26859481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
141-573
               

               
Cow position:
               
chr14:6490244-6490679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
144-289
               

               
Cow position:
               
chr14:33714210-33714351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 52
               

               
Conread position:
               
144-330
               

               
Cow position:
               
chr14:40051674-40051856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 116
               

               
Conread position:
               
144-445
               

               
Cow position:
               
chr14:3033486-3033782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
154, 79
               

               
Conread position:
               
144-505
               

               
Cow position:
               
chr14:19862984-19863338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 122
               

               
Conread position:
               
144-576
               

               
Cow position:
               
chr14:34096139-34096550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 31
               

               
Conread position:
               
145-462
               

               
Cow position:
               
chr14:13634250-13634574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 125
               

               
Conread position:
               
147-298
               

               
Cow position:
               
chr14:14416935-14417087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
147-572
               

               
Cow position:
               
chr14:20009865-20010282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
147-576
               

               
Cow position:
               
chr14:22989488-22989051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 282
               

               
Conread position:
               
148-297
               

               
Cow position:
               
chr14:15518071-15517921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
149-517
               

               
Cow position:
               
chr14:9029233-9029594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 10
               

               
Conread position:
               
153-500
               

               
Cow position:
               
chr14:21863584-21863927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
153-548
               

               
Cow position:
               
chr14:20320663-20321045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
101, 137
               

               
Conread position:
               
155-300
               

               
Cow position:
               
chr14:23153730-23153877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
157-391
               

               
Cow position:
               
chr14:19773040-19773275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
157-574
               

               
Cow position:
               
chr14:31129944-31130356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
158-506
               

               
Cow position:
               
chr14:26034241-26033887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 158
               

               
Conread position:
               
159-504
               

               
Cow position:
               
chr14:41448071-41448404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
94, 221
               

               
Conread position:
               
159-530
               

               
Cow position:
               
chr14:28131768-28132144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
94, 105
               

               
Conread position:
               
159-562
               

               
Cow position:
               
chr14:12249759-12250163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
159-576
               

               
Cow position:
               
chr14:49824198-49824605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
161-551
               

               
Cow position:
               
chr14:27254488-27254098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 198
               

               
Conread position:
               
162-438
               

               
Cow position:
               
chr14:39898022-39898298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
162-454
               

               
Cow position:
               
chr14:14419920-14419628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
165-344
               

               
Cow position:
               
chr14:35434419-35434597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
165-445
               

               
Cow position:
               
chr14:5076444-5076724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
165-460
               

               
Cow position:
               
chr14:12951593-12951885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
13, 163
               

               
Conread position:
               
165-500
               

               
Cow position:
               
chr14:14308226-14307895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
14, 55
               

               
Conread position:
               
165-503
               

               
Cow position:
               
chr14:40737226-40737572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
89, 178
               

               
Conread position:
               
165-504
               

               
Cow position:
               
chr14:34163427-34163776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
119, 87
               

               
Conread position:
               
165-504
               

               
Cow position:
               
chr14:47603873-47604201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
89, 108
               

               
Conread position:
               
165-564
               

               
Cow position:
               
chr14:24683703-24684095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 112
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr14:26441902-26442325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 283
               

               
Conread position:
               
166-551
               

               
Cow position:
               
chr14:43452742-43453137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
167-304
               

               
Cow position:
               
chr14:6914919-6915056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
167-325
               

               
Cow position:
               
chr14:2793498-2793656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 128
               

               
Conread position:
               
167-328
               

               
Cow position:
               
chr14:19877114-19876954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
167-574
               

               
Cow position:
               
chr14:8102211-8101809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 136
               

               
Conread position:
               
168-445
               

               
Cow position:
               
chr14:40721496-40721775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
168-576
               

               
Cow position:
               
chr14:27591516-27591940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 109
               

               
Conread position:
               
169-504
               

               
Cow position:
               
chr14:26449177-26448845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 109
               

               
Conread position:
               
170-308
               

               
Cow position:
               
chr14:24876203-24876065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
84, 128
               

               
Conread position:
               
170-405
               

               
Cow position:
               
chr14:46304878-46305113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 97
               

               
Conread position:
               
170-436
               

               
Cow position:
               
chr14:14605487-14605749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
157, 84
               

               
Conread position:
               
170-439
               

               
Cow position:
               
chr14:25993262-25993531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
155, 32
               

               
Conread position:
               
170-439
               

               
Cow position:
               
chr14:45848649-45848923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
170-443
               

               
Cow position:
               
chr14:39616480-39616758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
170-445
               

               
Cow position:
               
chr14:10157135-10156843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
170-450
               

               
Cow position:
               
chr14:2967216-2967509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
84, 285
               

               
Conread position:
               
170-458
               

               
Cow position:
               
chr14:26496293-26496003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
84, 160
               

               
Conread position:
               
170-458
               

               
Cow position:
               
chr14:39877185-39877468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
170-489
               

               
Cow position:
               
chr14:48400203-48399891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
170-500
               

               
Cow position:
               
chr14:18448583-18448911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
170-504
               

               
Cow position:
               
chr14:36440333-36440008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
86, 157
               

               
Conread position:
               
170-504
               

               
Cow position:
               
chr14:39807031-39807362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 107
               

               
Conread position:
               
170-504
               

               
Cow position:
               
chr14:40253645-40253316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 108
               

               
Conread position:
               
170-504
               

               
Cow position:
               
chr14:44253325-44253006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
170-505
               

               
Cow position:
               
chr14:19222312-19221976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 155
               

               
Conread position:
               
170-505
               

               
Cow position:
               
chr14:42918529-42918185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 282
               

               
Conread position:
               
170-507
               

               
Cow position:
               
chr14:34221485-34221148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 294
               

               
Conread position:
               
170-571
               

               
Cow position:
               
chr14:19618328-19618729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 217
               

               
Conread position:
               
170-574
               

               
Cow position:
               
chr14:10697098-10697487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 108
               

               
Conread position:
               
171-328
               

               
Cow position:
               
chr14:5112627-5112468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
171-445
               

               
Cow position:
               
chr14:36109345-36109082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
88, 107
               

               
Conread position:
               
171-446
               

               
Cow position:
               
chr14:19979598-19979876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
11, 123
               

               
Conread position:
               
171-448
               

               
Cow position:
               
chr14:23164163-23164434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
6, 60
               

               
Conread position:
               
171-505
               

               
Cow position:
               
chr14:21313960-21313621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
82, 272
               

               
Conread position:
               
171-505
               

               
Cow position:
               
chr14:34395241-34395578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 158
               

               
Conread position:
               
171-548
               

               
Cow position:
               
chr14:27355817-27355448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 131
               

               
Conread position:
               
171-568
               

               
Cow position:
               
chr14:26432820-26433217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 80
               

               
Conread position:
               
172-418
               

               
Cow position:
               
chr14:35986950-35986702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 8
               

               
Conread position:
               
172-503
               

               
Cow position:
               
chr14:2938070-2937748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
156, 19
               

               
Conread position:
               
174-505
               

               
Cow position:
               
chr14:6735444-6735764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 88
               

               
Conread position:
               
176-459
               

               
Cow position:
               
chr14:23179421-23179139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
78, 110
               

               
Conread position:
               
176-503
               

               
Cow position:
               
chr14:25458747-25458425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
177-362
               

               
Cow position:
               
chr14:12201876-12202061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
77, 101
               

               
Conread position:
               
177-505
               

               
Cow position:
               
chr14:6467076-6467409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
76, 268
               

               
Conread position:
               
177-506
               

               
Cow position:
               
chr14:49748111-49747781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 264
               

               
Conread position:
               
178-329
               

               
Cow position:
               
chr14:24399871-24400025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
178-438
               

               
Cow position:
               
chr14:19272061-19271808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
178-454
               

               
Cow position:
               
chr14:44772651-44772350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
178-503
               

               
Cow position:
               
chr14:40189443-40189114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
178-503
               

               
Cow position:
               
chr14:47583111-47582781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 267
               

               
Conread position:
               
178-505
               

               
Cow position:
               
chr14:9744214-9743883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
75, 264
               

               
Conread position:
               
178-505
               

               
Cow position:
               
chr14:12065550-12065217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 287
               

               
Conread position:
               
178-506
               

               
Cow position:
               
chr14:44214847-44214520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
75, 145
               

               
Conread position:
               
178-530
               

               
Cow position:
               
chr14:37791127-37791487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 265
               

               
Conread position:
               
178-542
               

               
Cow position:
               
chr14:50123342-50123712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
178-576
               

               
Cow position:
               
chr14:41211292-41210872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 281
               
UCSC Genome Browser

               
Conread position:
               
179-334
               

               
Cow position:
               
chr14:44233714-44233870 (view  custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 145
               
UCSC Genome Browser

               
               
               
Conread position:
179-439

               
               
               
Cow position:
chr14:21538062-21538312 (view  custom track)

               
               
               
Alignm length:
262

               
               
               
Alignm identity:
198

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
75, 36
UCSC Genome Browser

               
               
               
Conread position:
179-499

               
               
               
Cow position:
chr14:45042615-45042291 (view  custom track)

               
               
               
Alignm length:
327

               
               
               
Alignm identity:
224

               
               
               
Alignm E-value:
3.00018e-42

               
               
               
Alignm gaps (pig, cow):
74, 259

               
               
               Conread position:180-338
               
               
               Cow position:chr14:22911980-22911825 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:120
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):74, 129

               
               
               Conread position:180-403
               
               
               Cow position:chr14:37798032-37797806 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:155
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):70, 26

               
               
               Conread position:180-431
               
               
               Cow position:chr14:1649070-1648826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):114, 45

               
               
               Conread position:180-571
               
               
               Cow position:chr14:49221620-49222021 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:404
               
               
               Alignm identity:268
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):73, 263

               
               
               Conread position:181-429
               
               
               Cow position:chr14:41091499-41091246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:175
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):73, 9

               
               
               Conread position:181-438
               
               
               Cow position:chr14:33183964-33184228 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:173
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:181-439
               
               
               Cow position:chr14:7619843-7620107 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):118, 70

               
               
               Conread position:182-362
               
               
               Cow position:chr14:37179863-37179682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:129
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):39, 105

               
               
               Conread position:182-405
               
               
               Cow position:chr14:15918072-15918298 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:155
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:182-435
               
               
               Cow position:chr14:18844361-18844617 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):55, 142

               
               
               Conread position:182-445
               
               
               Cow position:chr14:23916241-23915985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:181
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):63, 105

               
               
               Conread position:182-574
               
               
               Cow position:chr14:21285041-21284641 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:408
               
               
               Alignm identity:308
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):72, 55

               
               
               Conread position:183-418
               
               
               Cow position:chr14:23080107-23080342 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:185
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):71, 95

               
               
               Conread position:183-435
               
               
               Cow position:chr14:33516025-33516276 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:172
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):11, 24

               
               
               Conread position:183-438
               
               
               Cow position:chr14:16016365-16016108 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):66, 12

               
               
               Conread position:183-505
               
               
               Cow position:chr14:12613704-12613999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:229
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:183-506
               
               
               Cow position:chr14:50556490-50556167 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:218
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):14, 129

               
               
               Conread position:183-548
               
               
               Cow position:chr14:29772187-29771819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:372
               
               
               Alignm identity:259
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):71, 199

               
               
               Conread position:184-362
               
               
               Cow position:chr14:20300205-20300385 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:148
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:184-484
               
               
               Cow position:chr14:35509558-35509851 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:229
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):69, 163

               
               
               Conread position:184-495
               
               
               Cow position:chr14:19193604-19193912 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:234
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):70, 94

               
               
               Conread position:184-500
               
               
               Cow position:chr14:37624071-37624385 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:234
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):111, 69

               
               
               Conread position:185-461
               
               
               Cow position:chr14:21570010-21569732 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):69, 55

               
               
               Conread position:186-494
               
               
               Cow position:chr14:1706695-1706379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:225
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):14, 154

               
               
               Conread position:186-526
               
               
               Cow position:chr14:10311093-10311438 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:237
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):67, 259

               
               
               Conread position:187-560
               
               
               Cow position:chr14:22918773-22918386 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:392
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):5, 148

               
               
               Conread position:189-552
               
               
               Cow position:chr14:3878862-3878503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:259
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):65, 24

               
               
               Conread position:190-443
               
               
               Cow position:chr14:45583789-45584045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:187
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:190-470
               
               
               Cow position:chr14:29299955-29300236 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:214
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):62, 51

               
               
               Conread position:190-505
               
               
               Cow position:chr14:42625883-42625572 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:231
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):45, 208

               
               
               Conread position:190-548
               
               
               Cow position:chr14:43249995-43249634 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:273
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):64, 116

               
               
               Conread position:190-551
               
               
               Cow position:chr14:38169087-38168735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:369
               
               
               Alignm identity:262
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):64, 109

               
               
               Conread position:191-329
               
               
               Cow position:chr14:5641519-5641379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:191-397
               
               
               Cow position:chr14:37412622-37412830 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:191-419
               
               
               Cow position:chr14:38529779-38529550 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):62, 213

               
               
               Conread position:191-451
               
               
               Cow position:chr14:43514405-43514671 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:180
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):63, 93

               
               
               Conread position:191-468
               
               
               Cow position:chr14:1796027-1795743 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:204
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):51, 126

               
               
               Conread position:191-505
               
               
               Cow position:chr14:5144455-5144774 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:217
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):62, 252

               
               
               Conread position:191-505
               
               
               Cow position:chr14:41148934-41148615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:219
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):62, 252

               
               
               Conread position:191-506
               
               
               Cow position:chr14:41211893-41211581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):62, 47

               
               
               Conread position:191-525
               
               
               Cow position:chr14:46391386-46391049 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:242
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):62, 34

               
               
               Conread position:191-562
               
               
               Cow position:chr14:40198850-40199229 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:253
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):62, 233

               
               
               Conread position:191-571
               
               
               Cow position:chr14:18911735-18911344 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:393
               
               
               Alignm identity:261
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):62, 252

               
               
               Conread position:191-574
               
               
               Cow position:chr14:1602522-1602902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:391
               
               
               Alignm identity:262
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):62, 252

               
               
               Conread position:191-574
               
               
               Cow position:chr14:25944003-25943614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:390
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:194-325
               
               
               Cow position:chr14:7466633-7466765 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:103
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:194-425
               
               
               Cow position:chr14:37258124-37258351 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):61, 98

               
               
               Conread position:194-438
               
               
               Cow position:chr14:39322310-39322560 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:194-443
               
               
               Cow position:chr14:15763747-15763500 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:173
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):126, 49

               
               
               Conread position:194-444
               
               
               Cow position:chr14:37331931-37331677 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:185
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):99, 8

               
               
               Conread position:194-538
               
               
               Cow position:chr14:23215096-23214750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:243
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):59, 251

               
               
               Conread position:194-567
               
               
               Cow position:chr14:5366279-5365907 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:387
               
               
               Alignm identity:270
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):61, 105

               
               
               Conread position:195-451
               
               
               Cow position:chr14:31618924-31619174 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:172
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):21, 55

               
               
               Conread position:196-387
               
               
               Cow position:chr14:2833128-2833315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):159, 131

               
               
               Conread position:197-438
               
               
               Cow position:chr14:6933689-6933443 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:165
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:197-505
               
               
               Cow position:chr14:45923191-45923504 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:209
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):56, 246

               
               
               Conread position:198-495
               
               
               Cow position:chr14:34021088-34020789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:224
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):56, 80

               
               
               Conread position:199-506
               
               
               Cow position:chr14:19323773-19323462 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:230
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):54, 161

               
               
               Conread position:199-530
               
               
               Cow position:chr14:15709096-15708773 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:222
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):54, 104

               
               
               Conread position:199-546
               
               
               Cow position:chr14:20016306-20016659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:360
               
               
               Alignm identity:267
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):55, 68

               
               
               Conread position:204-377
               
               
               Cow position:chr14:19342968-19343143 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:204-386
               
               
               Cow position:chr14:37635148-37634964 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:126
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:204-398
               
               
               Cow position:chr14:35929818-35930014 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:204-437
               
               
               Cow position:chr14:14242272-14242037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):42, 80

               
               
               Conread position:204-443
               
               
               Cow position:chr14:18323295-18323537 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:204-448
               
               
               Cow position:chr14:44712805-44713054 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:170
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):123, 49

               
               
               Conread position:204-468
               
               
               Cow position:chr14:24980289-24980020 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:195
               
               
               Alignm E-value:6e-40
               
               
               Alignm gaps (pig, cow):49, 241

               
               
               Conread position:204-505
               
               
               Cow position:chr14:38921330-38921044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:234
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):50, 65

               
               
               Conread position:204-505
               
               
               Cow position:chr14:45520276-45519973 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):49, 239

               
               
               Conread position:204-548
               
               
               Cow position:chr14:40201380-40201725 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:249
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):49, 193

               
               
               Conread position:204-574
               
               
               Cow position:chr14:33325998-33326376 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:381
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):50, 139

               
               
               Conread position:204-574
               
               
               Cow position:chr14:37236871-37236525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:374
               
               
               Alignm identity:252
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):50, 74

               
               
               Conread position:204-576
               
               
               Cow position:chr14:42154565-42154955 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:393
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):118, 241

               
               
               Conread position:205-507
               
               
               Cow position:chr14:37640628-37640328 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):49, 192

               
               
               Conread position:205-542
               
               
               Cow position:chr14:24237847-24238197 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:229
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):48, 241

               
               
               Conread position:205-571
               
               
               Cow position:chr14:35820140-35820515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:245
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):48, 238

               
               
               Conread position:206-429
               
               
               Cow position:chr14:12925702-12925473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:156
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):48, 178

               
               
               Conread position:207-505
               
               
               Cow position:chr14:41190502-41190781 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:225
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):47, 71

               
               
               Conread position:207-530
               
               
               Cow position:chr14:44700892-44700561 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:224
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):46, 238

               
               
               Conread position:209-551
               
               
               Cow position:chr14:6246473-6246834 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:363
               
               
               Alignm identity:256
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):45, 331

               
               
               Conread position:210-328
               
               
               Cow position:chr14:12719610-12719490 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:94
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:210-438
               
               
               Cow position:chr14:37790330-37790553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):49, 72

               
               
               Conread position:211-391
               
               
               Cow position:chr14:11142048-11141866 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):117, 0

               
               
               Conread position:212-365
               
               
               Cow position:chr14:42106813-42106662 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:116
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:215-505
               
               
               Cow position:chr14:25759841-25759546 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:198
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):38, 228

               
               
               Conread position:215-530
               
               
               Cow position:chr14:3107249-3107571 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:223
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):38, 16

               
               
               Conread position:215-571
               
               
               Cow position:chr14:33828530-33828184 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:364
               
               
               Alignm identity:265
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):39, 60

               
               
               Conread position:217-505
               
               
               Cow position:chr14:36437100-36437390 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:235
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 221

               
               
               Conread position:218-481
               
               
               Cow position:chr14:42330735-42330470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:209
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):103, 35

               
               
               Conread position:218-484
               
               
               Cow position:chr14:1796674-1796406 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:201
               
               
               Alignm E-value:6e-40
               
               
               Alignm gaps (pig, cow):35, 151

               
               
               Conread position:218-506
               
               
               Cow position:chr14:6554755-6555042 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:208
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):35, 159

               
               
               Conread position:218-542
               
               
               Cow position:chr14:33426026-33425688 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:228
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):35, 19

               
               
               Conread position:218-548
               
               
               Cow position:chr14:33247043-33247383 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:348
               
               
               Alignm identity:253
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):36, 188

               
               
               Conread position:218-564
               
               
               Cow position:chr14:37103582-37103247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:252
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):36, 74

               
               
               Conread position:219-564
               
               
               Cow position:chr14:20712300-20712663 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:364
               
               
               Alignm identity:271
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):35, 0

               
               
               Conread position:220-453
               
               
               Cow position:chr14:11056595-11056358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:181
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):34, 121

               
               
               Conread position:220-535
               
               
               Cow position:chr14:25991664-25991985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:216
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):33, 223

               
               
               Conread position:224-505
               
               
               Cow position:chr14:18308934-18309202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):30, 9

               
               
               Conread position:224-506
               
               
               Cow position:chr14:33667948-33668231 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:200
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):29, 9

               
               
               Conread position:225-505
               
               
               Cow position:chr14:20467737-20468013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):29, 121

               
               
               Conread position:225-535
               
               
               Cow position:chr14:7338376-7338060 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:212
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):28, 218

               
               
               Conread position:225-536
               
               
               Cow position:chr14:35410900-35411208 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:211
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):28, 51

               
               
               Conread position:225-548
               
               
               Cow position:chr14:4649647-4649965 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:232
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):29, 47

               
               
               Conread position:225-574
               
               
               Cow position:chr14:8964924-8964567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:253
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):27, 75

               
               
               Conread position:226-445
               
               
               Cow position:chr14:8989219-8989445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:179
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:228-405
               
               
               Cow position:chr14:40284275-40284096 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:228-560
               
               
               Cow position:chr14:27362419-27362075 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:348
               
               
               Alignm identity:259
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):18, 220

               
               
               Conread position:228-571
               
               
               Cow position:chr14:15281050-15280689 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:364
               
               
               Alignm identity:238
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):25, 269

               
               
               Conread position:229-402
               
               
               Cow position:chr14:13869216-13869041 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:132
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):27, 0

               
               
               Conread position:229-505
               
               
               Cow position:chr14:37151268-37151565 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:212
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:230-367
               
               
               Cow position:chr14:24437090-24436954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):24, 48

               
               
               Conread position:232-540
               
               
               Cow position:chr14:34082790-34083094 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):27, 46

               
               
               Conread position:232-547
               
               
               Cow position:chr14:26620986-26620663 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):26, 14

               
               
               Conread position:233-356
               
               
               Cow position:chr14:10721129-10721254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:126
               
               
               Alignm identity:106
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:233-548
               
               
               Cow position:chr14:40269472-40269796 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:235
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):6, 151

               
               
               Conread position:234-530
               
               
               Cow position:chr14:47588706-47588404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:218
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):19, 211

               
               
               Conread position:235-362
               
               
               Cow position:chr14:15314128-15314000 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:112
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:235-504
               
               
               Cow position:chr14:17013874-17013600 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:211
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):19, 134

               
               
               Conread position:235-505
               
               
               Cow position:chr14:7317202-7316922 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):20, 261

               
               
               Conread position:235-505
               
               
               Cow position:chr14:28197018-28197292 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:183
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):18, 207

               
               
               Conread position:235-576
               
               
               Cow position:chr14:45191413-45191752 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:229
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):11, 209

               
               
               Conread position:236-449
               
               
               Cow position:chr14:37727085-37727303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:164
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):18, 211

               
               
               Conread position:236-468
               
               
               Cow position:chr14:33226068-33225831 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:168
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):17, 209

               
               
               Conread position:236-561
               
               
               Cow position:chr14:48427441-48427103 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:260
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):18, 210

               
               
               Conread position:238-383
               
               
               Cow position:chr14:41179858-41179711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:117
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:238-483
               
               
               Cow position:chr14:35079650-35079415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:177
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):86, 16

               
               
               Conread position:238-504
               
               
               Cow position:chr14:12488327-12488603 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:207
               
               
               Alignm E-value:6e-40
               
               
               Alignm gaps (pig, cow):14, 164

               
               
               Conread position:238-534
               
               
               Cow position:chr14:25763448-25763754 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:205
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):16, 92

               
               
               Conread position:238-574
               
               
               Cow position:chr14:41809289-41809634 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:261
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):16, 143

               
               
               Conread position:238-575
               
               
               Cow position:chr14:39769860-39770216 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:264
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):16, 215

               
               
               Conread position:239-544
               
               
               Cow position:chr14:19633542-19633234 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:231
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):20, 54

               
               
               Conread position:240-517
               
               
               Cow position:chr14:6244563-6244855 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:197
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):6, 211

               
               
               Conread position:241-505
               
               
               Cow position:chr14:31333629-31333899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:179
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):5, 203

               
               
               Conread position:243-552
               
               
               Cow position:chr14:6203053-6203371 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:214
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):10, 200

               
               
               Conread position:244-576
               
               
               Cow position:chr14:40433278-40432942 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:209
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):13, 110

               
               
               Conread position:245-405
               
               
               Cow position:chr14:5315736-5315574 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:245-439
               
               
               Cow position:chr14:36585604-36585799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:149
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):9, 46

               
               
               Conread position:245-442
               
               
               Cow position:chr14:5318544-5318742 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):8, 146

               
               
               Conread position:245-450
               
               
               Cow position:chr14:31403124-31403333 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:145
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):76, 197

               
               
               Conread position:245-458
               
               
               Cow position:chr14:38031164-38030952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:162
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):9, 83

               
               
               Conread position:245-518
               
               
               Cow position:chr14:46965916-46965640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:213
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):9, 199

               
               
               Conread position:245-531
               
               
               Cow position:chr14:39926541-39926265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:207
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):8, 48

               
               
               Conread position:246-402
               
               
               Cow position:chr14:28324991-28324835 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:118
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:247-549
               
               
               Cow position:chr14:11507888-11508189 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:226
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):7, 222

               
               
               Conread position:248-536
               
               
               Cow position:chr14:8657908-8658197 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:212
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):5, 104

               
               
               Conread position:251-428
               
               
               Cow position:chr14:44731684-44731512 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:134
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):49, 141

               
               
               Conread position:251-481
               
               
               Cow position:chr14:3948721-3948956 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):75, 190

               
               
               Conread position:251-483
               
               
               Cow position:chr14:19207213-19206975 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:185
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:251-548
               
               
               Cow position:chr14:7291140-7290845 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:235
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):71, 25

               
               
               Conread position:251-552
               
               
               Cow position:chr14:30927042-30926746 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:220
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):73, 44

               
               
               Conread position:252-548
               
               
               Cow position:chr14:5994654-5994953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:200
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):69, 190

               
               
               Conread position:253-500
               
               
               Cow position:chr14:44482714-44482958 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:175
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):47, 191

               
               
               Conread position:253-502
               
               
               Cow position:chr14:48707751-48707994 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:172
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):36, 115

               
               
               Conread position:254-503
               
               
               Cow position:chr14:37934265-37934518 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):58, 13

               
               
               Conread position:255-535
               
               
               Cow position:chr14:8507329-8507044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):66, 187

               
               
               Conread position:255-569
               
               
               Cow position:chr14:17238707-17238379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:236
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):71, 14

               
               
               Conread position:256-536
               
               
               Cow position:chr14:46178339-46178052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:195
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):31, 191

               
               
               Conread position:257-571
               
               
               Cow position:chr14:46204482-46204804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:215
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):64, 185

               
               
               Conread position:258-500
               
               
               Cow position:chr14:4369708-4369960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:183
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):37, 123

               
               
               Conread position:259-570
               
               
               Cow position:chr14:18345393-18345709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:252
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):65, 18

               
               
               Conread position:261-505
               
               
               Cow position:chr14:16310431-16310181 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:165
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):10, 183

               
               
               Conread position:261-506
               
               
               Cow position:chr14:44848048-44848277 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:262-438
               
               
               Cow position:chr14:13367341-13367161 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:129
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):137, 0

               
               
               Conread position:262-477
               
               
               Cow position:chr14:10477965-10477745 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:153
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):59, 104

               
               
               Conread position:262-505
               
               
               Cow position:chr14:9901509-9901273 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):37, 20

               
               
               Conread position:263-571
               
               
               Cow position:chr14:30132961-30133277 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:202
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):58, 179

               
               
               Conread position:264-503
               
               
               Cow position:chr14:31888376-31888605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):63, 28

               
               
               Conread position:265-551
               
               
               Cow position:chr14:10702499-10702791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:213
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):120, 175

               
               
               Conread position:265-562
               
               
               Cow position:chr14:22350922-22351229 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:200
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):56, 177

               
               
               Conread position:268-487
               
               
               Cow position:chr14:19814227-19814436 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:156
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):120, 78

               
               
               Conread position:268-498
               
               
               Cow position:chr14:16310585-16310803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:174
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:268-575
               
               
               Cow position:chr14:9308558-9308248 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:229
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):31, 163

               
               
               Conread position:269-505
               
               
               Cow position:chr14:18484910-18485157 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:193
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:269-535
               
               
               Cow position:chr14:49107457-49107728 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):52, 173

               
               
               Conread position:271-499
               
               
               Cow position:chr14:37108582-37108807 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:178
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):50, 99

               
               
               Conread position:271-500
               
               
               Cow position:chr14:11641247-11641470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:182
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):57, 25

               
               
               Conread position:272-458
               
               
               Cow position:chr14:12484221-12484410 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:146
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):55, 65

               
               
               Conread position:273-495
               
               
               Cow position:chr14:47027048-47027264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:165
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):25, 119

               
               
               Conread position:275-535
               
               
               Cow position:chr14:18793622-18793356 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):8, 168

               
               
               Conread position:277-497
               
               
               Cow position:chr14:35607131-35607356 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:171
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):51, 167

               
               
               Conread position:277-502
               
               
               Cow position:chr14:26880483-26880709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:161
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):63, 0

               
               
               Conread position:277-503
               
               
               Cow position:chr14:26118332-26118105 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):163, 0

               
               
               Conread position:277-505
               
               
               Cow position:chr14:35763233-35763001 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:157
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):44, 165

               
               
               Conread position:277-536
               
               
               Cow position:chr14:7022490-7022225 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:176
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):50, 169

               
               
               Conread position:277-551
               
               
               Cow position:chr14:49086626-49086349 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:204
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):168, 49

               
               
               Conread position:277-561
               
               
               Cow position:chr14:43036200-43035927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:202
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):26, 17

               
               
               Conread position:277-574
               
               
               Cow position:chr14:24237141-24236844 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):101, 50

               
               
               Conread position:278-505
               
               
               Cow position:chr14:37887845-37887613 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:157
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):5, 165

               
               
               Conread position:278-540
               
               
               Cow position:chr14:8848570-8848311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:196
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):47, 167

               
               
               Conread position:279-477
               
               
               Cow position:chr14:45068767-45068967 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:160
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):48, 10

               
               
               Conread position:279-505
               
               
               Cow position:chr14:22967072-22966847 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:182
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):162, 0

               
               
               Conread position:279-507
               
               
               Cow position:chr14:35700753-35700519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):16, 190

               
               
               Conread position:280-408
               
               
               Cow position:chr14:20826317-20826180 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:113
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:280-439
               
               
               Cow position:chr14:43038776-43038933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:117
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):45, 37

               
               
               Conread position:280-457
               
               
               Cow position:chr14:24786952-24787129 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):44, 162

               
               
               Conread position:280-494
               
               
               Cow position:chr14:30152400-30152620 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):41, 57

               
               
               Conread position:280-506
               
               
               Cow position:chr14:109178-109409 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):124, 44

               
               
               Conread position:280-523
               
               
               Cow position:chr14:19106192-19105949 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):42, 20

               
               
               Conread position:280-530
               
               
               Cow position:chr14:4109154-4109410 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:192
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):49, 14

               
               
               Conread position:280-545
               
               
               Cow position:chr14:40183364-40183098 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):47, 165

               
               
               Conread position:280-551
               
               
               Cow position:chr14:44794228-44793954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:187
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):57, 122

               
               
               Conread position:280-552
               
               
               Cow position:chr14:49021584-49021858 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:211
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):135, 75

               
               
               Conread position:280-562
               
               
               Cow position:chr14:24613472-24613764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):41, 162

               
               
               Conread position:283-450
               
               
               Cow position:chr14:42776159-42776326 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):44, 157

               
               
               Conread position:288-499
               
               
               Cow position:chr14:29605925-29606132 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:157
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):153, 0

               
               
               Conread position:288-530
               
               
               Cow position:chr14:17474264-17474508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:170
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):40, 152

               
               
               Conread position:288-547
               
               
               Cow position:chr14:20932930-20932661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:202
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):40, 158

               
               
               Conread position:288-574
               
               
               Cow position:chr14:5221975-5222272 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:205
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):34, 144

               
               
               Conread position:288-576
               
               
               Cow position:chr14:10078569-10078285 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:216
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):215, 39

               
               
               Conread position:289-481
               
               
               Cow position:chr14:11748611-11748798 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:149
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:289-498
               
               
               Cow position:chr14:19996629-19996418 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:166
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):33, 0

               
               
               Conread position:289-498
               
               
               Cow position:chr14:44878475-44878685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):38, 78

               
               
               Conread position:289-500
               
               
               Cow position:chr14:19851609-19851833 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):32, 154

               
               
               Conread position:289-502
               
               
               Cow position:chr14:16834641-16834423 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:174
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):38, 107

               
               
               Conread position:289-504
               
               
               Cow position:chr14:37678685-37678906 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):27, 180

               
               
               Conread position:289-509
               
               
               Cow position:chr14:30662296-30662077 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:175
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):34, 11

               
               
               Conread position:289-529
               
               
               Cow position:chr14:37334002-37333758 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):38, 177

               
               
               Conread position:289-551
               
               
               Cow position:chr14:27305467-27305193 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:190
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):52, 157

               
               
               Conread position:289-552
               
               
               Cow position:chr14:36709435-36709162 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:203
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):13, 158

               
               
               Conread position:289-562
               
               
               Cow position:chr14:23712997-23712719 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:201
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):38, 152

               
               
               Conread position:289-564
               
               
               Cow position:chr14:6984657-6984929 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:190
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):152, 96

               
               
               Conread position:289-575
               
               
               Cow position:chr14:33751822-33751553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:215
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):37, 101

               
               
               Conread position:290-439
               
               
               Cow position:chr14:33580908-33580763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:110
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):105, 0

               
               
               Conread position:290-443
               
               
               Cow position:chr14:12559174-12559333 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):12, 140

               
               
               Conread position:290-498
               
               
               Cow position:chr14:43032114-43031901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):37, 58

               
               
               Conread position:290-500
               
               
               Cow position:chr14:14280727-14280512 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:167
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):34, 69

               
               
               Conread position:290-500
               
               
               Cow position:chr14:23107636-23107427 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:151
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):37, 59

               
               
               Conread position:290-505
               
               
               Cow position:chr14:12856906-12856696 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:170
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):13, 165

               
               
               Conread position:290-505
               
               
               Cow position:chr14:15033066-15032852 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:164
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):37, 119

               
               
               Conread position:290-505
               
               
               Cow position:chr14:33773743-33773955 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:162
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):108, 44

               
               
               Conread position:290-505
               
               
               Cow position:chr14:48412565-48412785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:169
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):7, 157

               
               
               Conread position:290-506
               
               
               Cow position:chr14:36289508-36289705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:158
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):33, 12

               
               
               Conread position:290-506
               
               
               Cow position:chr14:47591611-47591824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):92, 30

               
               
               Conread position:290-510
               
               
               Cow position:chr14:43565592-43565811 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:162
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):45, 37

               
               
               Conread position:290-542
               
               
               Cow position:chr14:16204664-16204909 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:176
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):141, 21

               
               
               Conread position:290-560
               
               
               Cow position:chr14:14187643-14187363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:212
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 127

               
               
               Conread position:290-574
               
               
               Cow position:chr14:41128200-41127916 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):108, 35

               
               
               Conread position:290-576
               
               
               Cow position:chr14:37131969-37131670 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 156

               
               
               Conread position:291-542
               
               
               Cow position:chr14:38406616-38406858 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):36, 81

               
               
               Conread position:291-551
               
               
               Cow position:chr14:38379329-38379065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:206
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):66, 115

               
               
               Conread position:292-472
               
               
               Cow position:chr14:19593832-19594012 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:142
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):35, 114

               
               
               Conread position:292-505
               
               
               Cow position:chr14:3564581-3564376 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:164
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):33, 57

               
               
               Conread position:292-568
               
               
               Cow position:chr14:18657292-18657582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:199
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):106, 79

               
               
               Conread position:292-575
               
               
               Cow position:chr14:33714380-33714660 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):35, 95

               
               
               Conread position:292-575
               
               
               Cow position:chr14:45677531-45677248 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:208
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):33, 74

               
               
               Conread position:292-576
               
               
               Cow position:chr14:23682571-23682280 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:208
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):107, 123

               
               
               Conread position:292-576
               
               
               Cow position:chr14:33791497-33791205 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:222
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):35, 153

               
               
               Conread position:293-463
               
               
               Cow position:chr14:19986131-19985954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):35, 0

               
               
               Conread position:293-468
               
               
               Cow position:chr14:15795503-15795674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):35, 110

               
               
               Conread position:293-504
               
               
               Cow position:chr14:8080261-8080067 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:155
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):34, 60

               
               
               Conread position:293-506
               
               
               Cow position:chr14:24797274-24797480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):122, 14

               
               
               Conread position:293-558
               
               
               Cow position:chr14:15518072-15518339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):29, 21

               
               
               Conread position:293-560
               
               
               Cow position:chr14:5836211-5835939 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:200
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):34, 152

               
               
               Conread position:293-574
               
               
               Cow position:chr14:35018449-35018734 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):33, 148

               
               
               Conread position:294-503
               
               
               Cow position:chr14:46782089-46782295 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:147
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):149, 94

               
               
               Conread position:294-505
               
               
               Cow position:chr14:26097382-26097597 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:158
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):104, 186

               
               
               Conread position:294-569
               
               
               Cow position:chr14:1716040-1715755 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):34, 149

               
               
               Conread position:297-504
               
               
               Cow position:chr14:35711877-35712083 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):30, 78

               
               
               Conread position:297-505
               
               
               Cow position:chr14:15913251-15913453 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:159
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:298-444
               
               
               Cow position:chr14:23527238-23527088 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):29, 146

               
               
               Conread position:298-448
               
               
               Cow position:chr14:42260255-42260410 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:114
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:298-472
               
               
               Cow position:chr14:34329357-34329526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:133
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):29, 95

               
               
               Conread position:298-482
               
               
               Cow position:chr14:20736832-20736646 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):29, 134

               
               
               Conread position:298-491
               
               
               Cow position:chr14:33209057-33209243 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:149
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):24, 112

               
               
               Conread position:298-497
               
               
               Cow position:chr14:34330841-34330647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:154
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):29, 95

               
               
               Conread position:298-503
               
               
               Cow position:chr14:38355485-38355283 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:150
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):22, 69

               
               
               Conread position:298-505
               
               
               Cow position:chr14:25231347-25231550 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):27, 114

               
               
               Conread position:298-534
               
               
               Cow position:chr14:9285449-9285222 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:159
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):30, 78

               
               
               Conread position:298-560
               
               
               Cow position:chr14:7482357-7482089 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):29, 86

               
               
               Conread position:298-571
               
               
               Cow position:chr14:4991293-4991024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):28, 71

               
               
               Conread position:298-574
               
               
               Cow position:chr14:5630465-5630181 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:207
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):21, 146

               
               
               Conread position:299-506
               
               
               Cow position:chr14:29884766-29884973 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):29, 141

               
               
               Conread position:299-552
               
               
               Cow position:chr14:8540915-8541170 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:184
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):26, 83

               
               
               Conread position:300-499
               
               
               Cow position:chr14:49929435-49929640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:155
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):22, 41

               
               
               Conread position:300-567
               
               
               Cow position:chr14:48740586-48740843 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:200
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):27, 57

               
               
               Conread position:301-567
               
               
               Cow position:chr14:3195149-3194882 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:187
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):28, 6

               
               
               Conread position:302-451
               
               
               Cow position:chr14:26654780-26654930 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:116
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):25, 141

               
               
               Conread position:302-498
               
               
               Cow position:chr14:23154586-23154785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):25, 142

               
               
               Conread position:302-504
               
               
               Cow position:chr14:12602174-12601971 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):22, 139

               
               
               Conread position:302-505
               
               
               Cow position:chr14:19624388-19624180 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:166
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):25, 145

               
               
               Conread position:302-551
               
               
               Cow position:chr14:49421513-49421758 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:169
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):26, 102

               
               
               Conread position:302-574
               
               
               Cow position:chr14:11819826-11820101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:212
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):25, 139

               
               
               Conread position:302-576
               
               
               Cow position:chr14:19850734-19851009 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):25, 103

               
               
               Conread position:303-576
               
               
               Cow position:chr14:17143868-17143593 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:184
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):25, 137

               
               
               Conread position:304-505
               
               
               Cow position:chr14:36151688-36151501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:147
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:304-574
               
               
               Cow position:chr14:10742794-10742528 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:184
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):18, 57

               
               
               Conread position:305-505
               
               
               Cow position:chr14:10858726-10858528 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:155
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):21, 137

               
               
               Conread position:305-531
               
               
               Cow position:chr14:14466185-14466410 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:180
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):207, 133

               
               
               Conread position:305-535
               
               
               Cow position:chr14:39422293-39422530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:175
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):31, 10

               
               
               Conread position:307-558
               
               
               Cow position:chr14:24922399-24922141 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:189
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):18, 0

               
               
               Conread position:308-509
               
               
               Cow position:chr14:47385927-47385736 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):19, 60

               
               
               Conread position:310-468
               
               
               Cow position:chr14:41716397-41716237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:126
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):17, 134

               
               
               Conread position:310-505
               
               
               Cow position:chr14:4226905-4227110 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:157
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):13, 112

               
               
               Conread position:311-482
               
               
               Cow position:chr14:21230323-21230159 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:130
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):80, 0

               
               
               Conread position:311-574
               
               
               Cow position:chr14:35498212-35498486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):10, 118

               
               
               Conread position:312-506
               
               
               Cow position:chr14:6997781-6997588 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:137
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):16, 93

               
               
               Conread position:313-472
               
               
               Cow position:chr14:40034257-40034101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:129
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):9, 83

               
               
               Conread position:313-501
               
               
               Cow position:chr14:27988934-27988748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:140
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):155, 14

               
               
               Conread position:313-505
               
               
               Cow position:chr14:8006051-8006232 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:145
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):14, 37

               
               
               Conread position:313-552
               
               
               Cow position:chr14:23464528-23464774 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):14, 52

               
               
               Conread position:314-504
               
               
               Cow position:chr14:11810284-11810475 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:148
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):13, 58

               
               
               Conread position:314-505
               
               
               Cow position:chr14:47672597-47672792 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:151
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):12, 53

               
               
               Conread position:314-536
               
               
               Cow position:chr14:4731587-4731354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:164
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):13, 148

               
               
               Conread position:315-505
               
               
               Cow position:chr14:19975502-19975324 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:139
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):12, 79

               
               
               Conread position:317-505
               
               
               Cow position:chr14:24786215-24786036 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:148
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:318-557
               
               
               Cow position:chr14:48446878-48447125 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:167
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):17, 128

               
               
               Conread position:319-548
               
               
               Cow position:chr14:11043208-11043445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):13, 185

               
               
               Conread position:319-562
               
               
               Cow position:chr14:37884130-37884379 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:183
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):11, 96

               
               
               Conread position:320-471
               
               
               Cow position:chr14:12961847-12961698 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:112
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):124, 86

               
               
               Conread position:320-495
               
               
               Cow position:chr14:6233984-6234164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:140
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:320-548
               
               
               Cow position:chr14:3868151-3868382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:173
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):119, 77

               
               
               Conread position:321-458
               
               
               Cow position:chr14:27845882-27845741 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:108
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:321-472
               
               
               Cow position:chr14:10609968-10609812 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:121
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):10, 87

               
               
               Conread position:321-503
               
               
               Cow position:chr14:25362624-25362443 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):73, 13

               
               
               Conread position:321-505
               
               
               Cow position:chr14:17841009-17841194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:145
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):74, 62

               
               
               Conread position:321-505
               
               
               Cow position:chr14:32452534-32452347 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):79, 124

               
               
               Conread position:321-545
               
               
               Cow position:chr14:17397327-17397545 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:162
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):119, 0

               
               
               Conread position:321-552
               
               
               Cow position:chr14:3005082-3004854 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:165
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):82, 29

               
               
               Conread position:321-552
               
               
               Cow position:chr14:24981732-24981497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:179
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):127, 59

               
               
               Conread position:321-558
               
               
               Cow position:chr14:37890128-37889898 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):148, 76

               
               
               Conread position:321-563
               
               
               Cow position:chr14:34355424-34355662 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:186
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):185, 52

               
               
               Conread position:321-574
               
               
               Cow position:chr14:19129789-19129525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:200
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:321-575
               
               
               Cow position:chr14:24796145-24796415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:199
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):28, 124

               
               
               Conread position:322-498
               
               
               Cow position:chr14:48689807-48689627 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:137
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):7, 132

               
               
               Conread position:322-548
               
               
               Cow position:chr14:6190661-6190894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:322-562
               
               
               Cow position:chr14:25378214-25378465 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):59, 122

               
               
               Conread position:323-576
               
               
               Cow position:chr14:29632607-29632868 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:194
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):76, 121

               
               
               Conread position:324-439
               
               
               Cow position:chr14:2036810-2036696 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:116
               
               
               Alignm identity:91
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:324-489
               
               
               Cow position:chr14:47036525-47036686 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):79, 43

               
               
               Conread position:324-505
               
               
               Cow position:chr14:50055676-50055486 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:325-562
               
               
               Cow position:chr14:39918489-39918716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:170
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):59, 116

               
               
               Conread position:326-449
               
               
               Cow position:chr14:37441182-37441306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:98
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):118, 0

               
               
               Conread position:326-449
               
               
               Cow position:chr14:37442828-37442952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:98
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):118, 0

               
               
               Conread position:330-552
               
               
               Cow position:chr14:8786280-8786508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:156
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):49, 86

               
               
               Conread position:332-576
               
               
               Cow position:chr14:19372610-19372356 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:196
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):25, 34

               
               
               Conread position:334-499
               
               
               Cow position:chr14:24839913-24840075 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:334-505
               
               
               Cow position:chr14:50504084-50504257 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:122
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):110, 0

               
               
               Conread position:334-530
               
               
               Cow position:chr14:50040506-50040306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:141
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):118, 193

               
               
               Conread position:335-576
               
               
               Cow position:chr14:13846250-13846002 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):151, 97

               
               
               Conread position:337-574
               
               
               Cow position:chr14:14979441-14979689 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:337-574
               
               
               Cow position:chr14:33309248-33309484 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):58, 5

               
               
               Conread position:340-574
               
               
               Cow position:chr14:28114924-28115168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:188
               
               
               Alignm E-value:8.00001e-42
               
               
               Alignm gaps (pig, cow):55, 105

               
               
               Conread position:341-505
               
               
               Cow position:chr14:24387709-24387543 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):63, 103

               
               
               Conread position:341-566
               
               
               Cow position:chr14:1645931-1646160 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:171
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):63, 104

               
               
               Conread position:341-572
               
               
               Cow position:chr14:40165679-40165445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:164
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):65, 44

               
               
               Conread position:341-574
               
               
               Cow position:chr14:20384723-20384966 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:167
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:341-574
               
               
               Cow position:chr14:34984122-34983889 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:166
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):58, 79

               
               
               Conread position:342-506
               
               
               Cow position:chr14:28004237-28004070 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):56, 111

               
               
               Conread position:348-505
               
               
               Cow position:chr14:26470880-26470722 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:348-505
               
               
               Cow position:chr14:29030079-29029924 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:122
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):135, 32

               
               
               Conread position:348-506
               
               
               Cow position:chr14:10721484-10721635 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:119
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:348-552
               
               
               Cow position:chr14:6175834-6175626 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):47, 94

               
               
               Conread position:348-571
               
               
               Cow position:chr14:20483216-20483435 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:349-505
               
               
               Cow position:chr14:11846751-11846590 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:119
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:349-505
               
               
               Cow position:chr14:12667982-12667824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:122
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:349-505
               
               
               Cow position:chr14:16033257-16033103 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:120
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):66, 26

               
               
               Conread position:349-505
               
               
               Cow position:chr14:39037479-39037329 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):116, 46

               
               
               Conread position:350-534
               
               
               Cow position:chr14:27919489-27919673 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:144
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):5, 9

               
               
               Conread position:351-500
               
               
               Cow position:chr14:6636644-6636796 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:113
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):53, 94

               
               
               Conread position:358-560
               
               
               Cow position:chr14:33643550-33643747 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:156
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):148, 49

               
               
               Conread position:358-561
               
               
               Cow position:chr14:20110479-20110690 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:159
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):42, 86

               
               
               Conread position:358-575
               
               
               Cow position:chr14:8750315-8750089 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:168
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):147, 83

               
               
               Conread position:359-504
               
               
               Cow position:chr14:22952758-22952898 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:113
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:360-564
               
               
               Cow position:chr14:12324663-12324456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):84, 176

               
               
               Conread position:361-505
               
               
               Cow position:chr14:20301769-20301917 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:114
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:363-505
               
               
               Cow position:chr14:38747898-38747761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:109
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:364-548
               
               
               Cow position:chr14:14948975-14949167 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:364-548
               
               
               Cow position:chr14:26190861-26191058 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:147
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):31, 106

               
               
               Conread position:364-576
               
               
               Cow position:chr14:13042996-13042772 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:163
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):38, 94

               
               
               Conread position:364-576
               
               
               Cow position:chr14:16760634-16760417 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):41, 81

               
               
               Conread position:366-504
               
               
               Cow position:chr14:37435063-37435202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:112
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):57, 110

               
               
               Conread position:369-574
               
               
               Cow position:chr14:37447247-37447448 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):137, 37

               
               
               Conread position:370-552
               
               
               Cow position:chr14:14581094-14580911 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):136, 71

               
               
               Conread position:371-551
               
               
               Cow position:chr14:28285075-28285266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:139
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):36, 74

               
               
               Conread position:373-505
               
               
               Cow position:chr14:28924611-28924480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:105
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:373-560
               
               
               Cow position:chr14:26490518-26490707 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:150
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):134, 57

               
               
               Conread position:373-576
               
               
               Cow position:chr14:20826698-20826507 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:153
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):182, 27

               
               
               Conread position:374-551
               
               
               Cow position:chr14:30605697-30605874 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:127
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):130, 28

               
               
               Conread position:379-551
               
               
               Cow position:chr14:25986740-25986559 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:135
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):25, 66

               
               
               Conread position:379-552
               
               
               Cow position:chr14:33830516-33830343 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):132, 62

               
               
               Conread position:383-560
               
               
               Cow position:chr14:19394575-19394396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:128
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):123, 58

               
               
               Conread position:398-504
               
               
               Cow position:chr14:8936448-8936555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:108
               
               
               Alignm identity:90
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:398-562
               
               
               Cow position:chr14:16256966-16256797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):104, 42

               
               
               Conread position:400-547
               
               
               Cow position:chr14:11604228-11604375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:113
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):105, 41

               
               
               Conread position:400-552
               
               
               Cow position:chr14:41966438-41966286 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):107, 41

               
               
               Conread position:401-574
               
               
               Cow position:chr14:4877034-4877212 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):107, 40

               
               
               Conread position:401-576
               
               
               Cow position:chr14:24608163-24607981 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):102, 40

               
               
               Conread position:405-562
               
               
               Cow position:chr14:16549811-16549972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):100, 36

               
               
               Conread position:407-568
               
               
               Cow position:chr14:19740077-19740233 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:122
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):39, 101

               
               
               Conread position:407-576
               
               
               Cow position:chr14:48838786-48838612 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:127
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):98, 34

               
               
               Conread position:411-568
               
               
               Cow position:chr14:23080578-23080742 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:125
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):92, 12

               
               
               Conread position:417-552
               
               
               Cow position:chr14:38673450-38673590 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:111
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):88, 24
Show alignments to all cow chromosomes.