• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-rret33_d17.5
        

               
Conread position:
               
99-297
               

               
Cow position:
               
chr20:11389802-11389600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
110-438
               

               
Cow position:
               
chr20:7595546-7595877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
20, 271
               

               
Conread position:
               
111-503
               

               
Cow position:
               
chr20:7646166-7645770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 227
               

               
Conread position:
               
113-471
               

               
Cow position:
               
chr20:13501522-13501890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
113-506
               

               
Cow position:
               
chr20:4800991-4801389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
114-439
               

               
Cow position:
               
chr20:2941983-2941643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
20, 269
               

               
Conread position:
               
114-502
               

               
Cow position:
               
chr20:14210563-14210167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
17, 334
               

               
Conread position:
               
114-536
               

               
Cow position:
               
chr20:10235450-10235884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 333
               

               
Conread position:
               
115-265
               

               
Cow position:
               
chr20:4911689-4911840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
115-278
               

               
Cow position:
               
chr20:12034119-12033952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
115-308
               

               
Cow position:
               
chr20:26078801-26078619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
115-361
               

               
Cow position:
               
chr20:28440870-28441112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
88, 188
               

               
Conread position:
               
115-437
               

               
Cow position:
               
chr20:32866745-32866418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
115-437
               

               
Cow position:
               
chr20:34836265-34835943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 164
               

               
Conread position:
               
115-445
               

               
Cow position:
               
chr20:25352595-25352259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
115-504
               

               
Cow position:
               
chr20:34597524-34597111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
17, 262
               

               
Conread position:
               
115-505
               

               
Cow position:
               
chr20:19146468-19146865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
115-551
               

               
Cow position:
               
chr20:39418282-39417857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
115-552
               

               
Cow position:
               
chr20:9433211-9433630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
115-561
               

               
Cow position:
               
chr20:31845982-31845507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 468
               

               
Conread position:
               
115-561
               

               
Cow position:
               
chr20:33363114-33363571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
115-571
               

               
Cow position:
               
chr20:398690-398243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
115-574
               

               
Cow position:
               
chr20:22313557-22313094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
116-250
               

               
Cow position:
               
chr20:4205477-4205611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
116-266
               

               
Cow position:
               
chr20:28067786-28067638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
116-300
               

               
Cow position:
               
chr20:10759884-10759701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
138, 13
               

               
Conread position:
               
118-536
               

               
Cow position:
               
chr20:38488598-38489019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
119-329
               

               
Cow position:
               
chr20:41975650-41975865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
119-574
               

               
Cow position:
               
chr20:1761635-1762102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 327
               

               
Conread position:
               
120-310
               

               
Cow position:
               
chr20:26679444-26679632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
120-399
               

               
Cow position:
               
chr20:5939374-5939083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 137
               

               
Conread position:
               
120-435
               

               
Cow position:
               
chr20:33356028-33356351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 141
               

               
Conread position:
               
120-472
               

               
Cow position:
               
chr20:12155507-12155146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
120-498
               

               
Cow position:
               
chr20:10913732-10913349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 230
               

               
Conread position:
               
120-503
               

               
Cow position:
               
chr20:13048818-13048425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 167
               

               
Conread position:
               
120-505
               

               
Cow position:
               
chr20:31077138-31077544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 148
               

               
Conread position:
               
120-505
               

               
Cow position:
               
chr20:34202251-34202640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
120-552
               

               
Cow position:
               
chr20:27339666-27340106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 266
               

               
Conread position:
               
120-569
               

               
Cow position:
               
chr20:20353312-20352854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 225
               

               
Conread position:
               
120-576
               

               
Cow position:
               
chr20:32846955-32847413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
121-506
               

               
Cow position:
               
chr20:29370572-29370189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 193
               

               
Conread position:
               
124-505
               

               
Cow position:
               
chr20:3378161-3378542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
129, 35
               

               
Conread position:
               
124-553
               

               
Cow position:
               
chr20:31747014-31746582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 204
               

               
Conread position:
               
126-544
               

               
Cow position:
               
chr20:33176811-33177221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 132
               

               
Conread position:
               
127-442
               

               
Cow position:
               
chr20:30396106-30395798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
127-492
               

               
Cow position:
               
chr20:10818612-10818250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
127-505
               

               
Cow position:
               
chr20:5077809-5078190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 140
               

               
Conread position:
               
127-505
               

               
Cow position:
               
chr20:28246569-28246183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
126, 319
               

               
Conread position:
               
128-282
               

               
Cow position:
               
chr20:5116973-5116814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
128-286
               

               
Cow position:
               
chr20:21928293-21928460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
128-289
               

               
Cow position:
               
chr20:39023411-39023249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
128-333
               

               
Cow position:
               
chr20:24347316-24347103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
128-360
               

               
Cow position:
               
chr20:5644435-5644676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
128-367
               

               
Cow position:
               
chr20:19340460-19340214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
128-468
               

               
Cow position:
               
chr20:34968854-34969199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
125, 319
               

               
Conread position:
               
128-472
               

               
Cow position:
               
chr20:9707282-9706940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
128-483
               

               
Cow position:
               
chr20:20966970-20967301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 149
               

               
Conread position:
               
128-530
               

               
Cow position:
               
chr20:17657379-17656977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
128-535
               

               
Cow position:
               
chr20:30689725-30690134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 277
               

               
Conread position:
               
128-552
               

               
Cow position:
               
chr20:18100032-18100451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 220
               

               
Conread position:
               
128-576
               

               
Cow position:
               
chr20:28604828-28605278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 92
               

               
Conread position:
               
129-308
               

               
Cow position:
               
chr20:15079045-15078865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
129-320
               

               
Cow position:
               
chr20:39515643-39515451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
129-329
               

               
Cow position:
               
chr20:10099978-10100180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
129-329
               

               
Cow position:
               
chr20:40503867-40503665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
129-384
               

               
Cow position:
               
chr20:29990857-29990607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
125, 41
               

               
Conread position:
               
129-426
               

               
Cow position:
               
chr20:37439244-37439542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
124, 278
               

               
Conread position:
               
129-450
               

               
Cow position:
               
chr20:25122382-25122056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-471
               

               
Cow position:
               
chr20:13303444-13303097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-477
               

               
Cow position:
               
chr20:33810724-33811077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr20:4578990-4578609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr20:5097619-5097238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr20:5502886-5502505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr20:21952838-21953219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr20:26597688-26598069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr20:26737595-26737214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr20:29284754-29284373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr20:29308180-29307799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr20:30479964-30480345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-505
               

               
Cow position:
               
chr20:33514476-33514857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-530
               

               
Cow position:
               
chr20:13766737-13767146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 316
               

               
Conread position:
               
129-533
               

               
Cow position:
               
chr20:33303873-33303467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
129-535
               

               
Cow position:
               
chr20:7641775-7642187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-535
               

               
Cow position:
               
chr20:24388537-24388949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-535
               

               
Cow position:
               
chr20:33021530-33021942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-535
               

               
Cow position:
               
chr20:35073236-35073648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-535
               

               
Cow position:
               
chr20:38956223-38955811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-542
               

               
Cow position:
               
chr20:4746348-4745926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-547
               

               
Cow position:
               
chr20:9994136-9994564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-548
               

               
Cow position:
               
chr20:36424336-36424765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-562
               

               
Cow position:
               
chr20:30908814-30909258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-562
               

               
Cow position:
               
chr20:39269885-39269441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-563
               

               
Cow position:
               
chr20:8247135-8246693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 312
               

               
Conread position:
               
129-564
               

               
Cow position:
               
chr20:33994400-33993953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-571
               

               
Cow position:
               
chr20:11330556-11330102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
124, 315
               

               
Conread position:
               
129-571
               

               
Cow position:
               
chr20:20764768-20765221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-571
               

               
Cow position:
               
chr20:22060323-22059869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 315
               

               
Conread position:
               
129-571
               

               
Cow position:
               
chr20:26076696-26077145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 155
               

               
Conread position:
               
129-576
               

               
Cow position:
               
chr20:3745237-3745681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
129-576
               

               
Cow position:
               
chr20:36310648-36310196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 314
               

               
Conread position:
               
130-505
               

               
Cow position:
               
chr20:20693210-20692830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
123, 313
               

               
Conread position:
               
130-549
               

               
Cow position:
               
chr20:3034718-3035146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
130-571
               

               
Cow position:
               
chr20:326378-326821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
123, 134
               

               
Conread position:
               
131-371
               

               
Cow position:
               
chr20:9267511-9267264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 182
               

               
Conread position:
               
131-443
               

               
Cow position:
               
chr20:23681662-23681347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
35, 203
               

               
Conread position:
               
131-547
               

               
Cow position:
               
chr20:26469462-26469024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 326
               

               
Conread position:
               
131-562
               

               
Cow position:
               
chr20:14572756-14572311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 34
               

               
Conread position:
               
132-384
               

               
Cow position:
               
chr20:32583169-32582916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 44
               

               
Conread position:
               
133-241
               

               
Cow position:
               
chr20:12584868-12584760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-280
               

               
Cow position:
               
chr20:12421020-12420872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
133-295
               

               
Cow position:
               
chr20:9006974-9006805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
133-296
               

               
Cow position:
               
chr20:10288544-10288707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr20:22850734-22850903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
133-298
               

               
Cow position:
               
chr20:18550958-18551123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-298
               

               
Cow position:
               
chr20:24209594-24209766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
133-300
               

               
Cow position:
               
chr20:9509311-9509143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
133-300
               

               
Cow position:
               
chr20:32352615-32352778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
133-300
               

               
Cow position:
               
chr20:32355026-32355189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
133-308
               

               
Cow position:
               
chr20:28500234-28500058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
133-308
               

               
Cow position:
               
chr20:32163863-32163687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
133-308
               

               
Cow position:
               
chr20:33568567-33568742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
120, 64
               

               
Conread position:
               
133-311
               

               
Cow position:
               
chr20:7803593-7803414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
133-313
               

               
Cow position:
               
chr20:1191510-1191691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
133-313
               

               
Cow position:
               
chr20:7567964-7567773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
133-313
               

               
Cow position:
               
chr20:7592450-7592259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
133-321
               

               
Cow position:
               
chr20:34107577-34107773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 186
               

               
Conread position:
               
133-325
               

               
Cow position:
               
chr20:22209480-22209673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
133-329
               

               
Cow position:
               
chr20:14926265-14926462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 34
               

               
Conread position:
               
133-329
               

               
Cow position:
               
chr20:18162645-18162843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
133-355
               

               
Cow position:
               
chr20:7527746-7527519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
32, 192
               

               
Conread position:
               
133-359
               

               
Cow position:
               
chr20:34239949-34240174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
133-388
               

               
Cow position:
               
chr20:38935590-38935338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
133-393
               

               
Cow position:
               
chr20:36399194-36398942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
133-398
               

               
Cow position:
               
chr20:39391283-39391016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
133-402
               

               
Cow position:
               
chr20:15117663-15117939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 177
               

               
Conread position:
               
133-402
               

               
Cow position:
               
chr20:34900437-34900708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
133-404
               

               
Cow position:
               
chr20:9340411-9340680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
120, 101
               

               
Conread position:
               
133-416
               

               
Cow position:
               
chr20:2486860-2487135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 161
               

               
Conread position:
               
133-418
               

               
Cow position:
               
chr20:11516189-11515898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
133-419
               

               
Cow position:
               
chr20:8278210-8277925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 141
               

               
Conread position:
               
133-419
               

               
Cow position:
               
chr20:35169901-35170188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
120, 271
               

               
Conread position:
               
133-425
               

               
Cow position:
               
chr20:15821934-15822228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
133-437
               

               
Cow position:
               
chr20:13267810-13267505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 69
               

               
Conread position:
               
133-438
               

               
Cow position:
               
chr20:4756204-4755897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 145
               

               
Conread position:
               
133-439
               

               
Cow position:
               
chr20:1745146-1745458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 77
               

               
Conread position:
               
133-439
               

               
Cow position:
               
chr20:7710589-7710284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 194
               

               
Conread position:
               
133-439
               

               
Cow position:
               
chr20:18530059-18530374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
133-443
               

               
Cow position:
               
chr20:22651115-22651436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
133-444
               

               
Cow position:
               
chr20:13789930-13790240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 37
               

               
Conread position:
               
133-445
               

               
Cow position:
               
chr20:13817463-13817778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 200
               

               
Conread position:
               
133-445
               

               
Cow position:
               
chr20:14719122-14718809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
133-445
               

               
Cow position:
               
chr20:16957200-16956888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
133-445
               

               
Cow position:
               
chr20:27565633-27565955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
133-449
               

               
Cow position:
               
chr20:12012945-12013261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
32, 188
               

               
Conread position:
               
133-454
               

               
Cow position:
               
chr20:4672545-4672887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 279
               

               
Conread position:
               
133-455
               

               
Cow position:
               
chr20:4893295-4892961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 280
               

               
Conread position:
               
133-457
               

               
Cow position:
               
chr20:8869662-8869332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
33, 175
               

               
Conread position:
               
133-458
               

               
Cow position:
               
chr20:32548587-32548905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 44
               

               
Conread position:
               
133-466
               

               
Cow position:
               
chr20:12434553-12434212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
120, 57
               

               
Conread position:
               
133-468
               

               
Cow position:
               
chr20:7596727-7596386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 315
               

               
Conread position:
               
133-469
               

               
Cow position:
               
chr20:39375806-39376129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 166
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr20:17845566-17845918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
133-478
               

               
Cow position:
               
chr20:3501912-3502259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 294
               

               
Conread position:
               
133-481
               

               
Cow position:
               
chr20:5181523-5181867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
120, 170
               

               
Conread position:
               
133-482
               

               
Cow position:
               
chr20:4781179-4781533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
133-488
               

               
Cow position:
               
chr20:4788616-4788254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
119, 141
               

               
Conread position:
               
133-489
               

               
Cow position:
               
chr20:4895284-4894914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 323
               

               
Conread position:
               
133-493
               

               
Cow position:
               
chr20:40423477-40423111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
133-496
               

               
Cow position:
               
chr20:9014730-9014364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 335
               

               
Conread position:
               
133-496
               

               
Cow position:
               
chr20:17831459-17831828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 215
               

               
Conread position:
               
133-498
               

               
Cow position:
               
chr20:19410747-19410381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 186
               

               
Conread position:
               
133-498
               

               
Cow position:
               
chr20:23065225-23064847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 323
               

               
Conread position:
               
133-498
               

               
Cow position:
               
chr20:28888498-28888882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 178
               

               
Conread position:
               
133-498
               

               
Cow position:
               
chr20:41977041-41977398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 92
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr20:10538940-10539302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 71
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr20:11614425-11614057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 328
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr20:18413471-18413840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr20:21324725-21325101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
33, 284
               

               
Conread position:
               
133-502
               

               
Cow position:
               
chr20:4950802-4950428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 327
               

               
Conread position:
               
133-502
               

               
Cow position:
               
chr20:10859747-10859373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 309
               

               
Conread position:
               
133-502
               

               
Cow position:
               
chr20:21720395-21720769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-503
               

               
Cow position:
               
chr20:18222960-18222587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 249
               

               
Conread position:
               
133-503
               

               
Cow position:
               
chr20:21019184-21019553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 58
               

               
Conread position:
               
133-504
               

               
Cow position:
               
chr20:581303-580934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
133-504
               

               
Cow position:
               
chr20:13821970-13821592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
33, 201
               

               
Conread position:
               
133-504
               

               
Cow position:
               
chr20:14832007-14831625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 343
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:746578-746937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 170
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:754300-754676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 309
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:5104816-5104450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 260
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:7399075-7398703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 204
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:7806944-7806567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 348
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:8429369-8429740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 76
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:9473995-9473624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 131
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:9536755-9537126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 145
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:12048026-12048384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 212
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:12442078-12441695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:13505723-13505349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
120, 309
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:17820586-17820232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
120, 217
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:23679535-23679157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 288
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:25844449-25844073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 314
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:26415548-26415188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 264
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:27641754-27642131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 312
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:28443493-28443124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
120, 162
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:31784454-31784077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-505
               

               
Cow position:
               
chr20:33540496-33540873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
120, 309
               

               
Conread position:
               
133-506
               

               
Cow position:
               
chr20:5958286-5957910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 310
               

               
Conread position:
               
133-506
               

               
Cow position:
               
chr20:12996395-12996019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 290
               

               
Conread position:
               
133-506
               

               
Cow position:
               
chr20:14740470-14740104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 121
               

               
Conread position:
               
133-506
               

               
Cow position:
               
chr20:31221102-31221479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
120, 190
               

               
Conread position:
               
133-506
               

               
Cow position:
               
chr20:39425535-39425140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 381
               

               
Conread position:
               
133-508
               

               
Cow position:
               
chr20:41688257-41688624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
120, 64
               

               
Conread position:
               
133-523
               

               
Cow position:
               
chr20:8112432-8112829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 307
               

               
Conread position:
               
133-525
               

               
Cow position:
               
chr20:38001337-38001725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
133-526
               

               
Cow position:
               
chr20:6549850-6549464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 156
               

               
Conread position:
               
133-526
               

               
Cow position:
               
chr20:40058373-40058771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 137
               

               
Conread position:
               
133-529
               

               
Cow position:
               
chr20:15089514-15089119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
133-529
               

               
Cow position:
               
chr20:26826004-26825616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
120, 145
               

               
Conread position:
               
133-529
               

               
Cow position:
               
chr20:27877341-27877746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 315
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr20:5539007-5539409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 156
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr20:8482585-8482187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 83
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr20:12567469-12567071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr20:15295880-15296279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
120, 263
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr20:17889469-17889065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 34
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr20:21959437-21959032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 312
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr20:23803009-23803413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 311
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr20:25296966-25296576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
120, 145
               

               
Conread position:
               
133-530
               

               
Cow position:
               
chr20:35036409-35036005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 249
               

               
Conread position:
               
133-536
               

               
Cow position:
               
chr20:13325955-13326355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 26
               

               
Conread position:
               
133-538
               

               
Cow position:
               
chr20:10497582-10497178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 278
               

               
Conread position:
               
133-541
               

               
Cow position:
               
chr20:14636893-14637289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 180
               

               
Conread position:
               
133-542
               

               
Cow position:
               
chr20:28439695-28440118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 170
               

               
Conread position:
               
133-546
               

               
Cow position:
               
chr20:12321251-12321660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 218
               

               
Conread position:
               
133-547
               

               
Cow position:
               
chr20:11176629-11176209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-547
               

               
Cow position:
               
chr20:29979648-29980069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
133-551
               

               
Cow position:
               
chr20:9411204-9411626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
133-551
               

               
Cow position:
               
chr20:10178477-10178056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 56
               

               
Conread position:
               
133-551
               

               
Cow position:
               
chr20:13493355-13493777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 258
               

               
Conread position:
               
133-551
               

               
Cow position:
               
chr20:14756451-14756025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 309
               

               
Conread position:
               
133-552
               

               
Cow position:
               
chr20:4945627-4945208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
133-552
               

               
Cow position:
               
chr20:6239029-6238594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
133-552
               

               
Cow position:
               
chr20:16715022-16715434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 143
               

               
Conread position:
               
133-552
               

               
Cow position:
               
chr20:34001771-34001346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 80
               

               
Conread position:
               
133-553
               

               
Cow position:
               
chr20:39742934-39743354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 77
               

               
Conread position:
               
133-560
               

               
Cow position:
               
chr20:36780117-36779677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
133-562
               

               
Cow position:
               
chr20:6258444-6258007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 72
               

               
Conread position:
               
133-562
               

               
Cow position:
               
chr20:25658171-25657773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
119, 216
               

               
Conread position:
               
133-566
               

               
Cow position:
               
chr20:18091755-18091313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
120, 210
               

               
Conread position:
               
133-569
               

               
Cow position:
               
chr20:2819193-2819598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
120, 25
               

               
Conread position:
               
133-569
               

               
Cow position:
               
chr20:10468693-10469126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 95
               

               
Conread position:
               
133-570
               

               
Cow position:
               
chr20:40176871-40177307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 189
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr20:774612-774163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr20:8577866-8578312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 66
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr20:13618935-13618487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 309
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr20:30736780-30736331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-571
               

               
Cow position:
               
chr20:38350948-38350499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr20:3599779-3599329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr20:6096866-6096429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 71
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr20:10919697-10919254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 308
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr20:17863983-17864433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
120, 310
               

               
Conread position:
               
133-574
               

               
Cow position:
               
chr20:23871202-23870753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 317
               

               
Conread position:
               
133-575
               

               
Cow position:
               
chr20:19363743-19363295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
133-575
               

               
Cow position:
               
chr20:35970563-35971006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 57
               

               
Conread position:
               
133-576
               

               
Cow position:
               
chr20:7757009-7756554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 160
               

               
Conread position:
               
133-576
               

               
Cow position:
               
chr20:11549984-11550437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 274
               

               
Conread position:
               
133-576
               

               
Cow position:
               
chr20:13269245-13269689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 105
               

               
Conread position:
               
133-576
               

               
Cow position:
               
chr20:14806504-14806955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
133-576
               

               
Cow position:
               
chr20:18321176-18320723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 145
               

               
Conread position:
               
133-576
               

               
Cow position:
               
chr20:23792220-23792672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 200
               

               
Conread position:
               
134-297
               

               
Cow position:
               
chr20:21398660-21398825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
134-298
               

               
Cow position:
               
chr20:14760095-14759924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
134-300
               

               
Cow position:
               
chr20:3294140-3293976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
119, 72
               

               
Conread position:
               
134-439
               

               
Cow position:
               
chr20:34095465-34095782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
134-448
               

               
Cow position:
               
chr20:11171509-11171826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
119, 10
               

               
Conread position:
               
134-449
               

               
Cow position:
               
chr20:39875672-39875356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 178
               

               
Conread position:
               
134-477
               

               
Cow position:
               
chr20:5702367-5702711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 156
               

               
Conread position:
               
134-505
               

               
Cow position:
               
chr20:11350553-11350929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 309
               

               
Conread position:
               
134-505
               

               
Cow position:
               
chr20:15937328-15937702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
187, 25
               

               
Conread position:
               
134-505
               

               
Cow position:
               
chr20:20983645-20983987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 25
               

               
Conread position:
               
134-506
               

               
Cow position:
               
chr20:31927839-31927464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 334
               

               
Conread position:
               
134-542
               

               
Cow position:
               
chr20:12176630-12176210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
92, 310
               

               
Conread position:
               
134-542
               

               
Cow position:
               
chr20:14011604-14012002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 101
               

               
Conread position:
               
134-542
               

               
Cow position:
               
chr20:18651468-18651886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
119, 309
               

               
Conread position:
               
134-553
               

               
Cow position:
               
chr20:24391614-24392023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
134-571
               

               
Cow position:
               
chr20:13114813-13114366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 136
               

               
Conread position:
               
134-571
               

               
Cow position:
               
chr20:14837045-14837494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
119, 310
               

               
Conread position:
               
135-311
               

               
Cow position:
               
chr20:32084597-32084421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
135-319
               

               
Cow position:
               
chr20:10686561-10686752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
135-367
               

               
Cow position:
               
chr20:35995314-35995079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
135-396
               

               
Cow position:
               
chr20:6017453-6017186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 195
               

               
Conread position:
               
135-397
               

               
Cow position:
               
chr20:9082536-9082272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
135-465
               

               
Cow position:
               
chr20:12839678-12840007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 168
               

               
Conread position:
               
135-465
               

               
Cow position:
               
chr20:23849912-23850234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 114
               

               
Conread position:
               
135-471
               

               
Cow position:
               
chr20:13652743-13652396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
119, 103
               

               
Conread position:
               
135-544
               

               
Cow position:
               
chr20:8910525-8910955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 278
               

               
Conread position:
               
135-549
               

               
Cow position:
               
chr20:1990118-1989712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 79
               

               
Conread position:
               
135-557
               

               
Cow position:
               
chr20:3781812-3781374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 313
               

               
Conread position:
               
135-574
               

               
Cow position:
               
chr20:29844663-29845117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 60
               

               
Conread position:
               
136-443
               

               
Cow position:
               
chr20:21371915-21372250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
136-454
               

               
Cow position:
               
chr20:27843253-27843598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 5
               

               
Conread position:
               
136-503
               

               
Cow position:
               
chr20:38123499-38123878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
30, 201
               

               
Conread position:
               
137-308
               

               
Cow position:
               
chr20:26683766-26683595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
137-313
               

               
Cow position:
               
chr20:11720595-11720772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
137-315
               

               
Cow position:
               
chr20:33248621-33248800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
137-324
               

               
Cow position:
               
chr20:21888811-21888631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
116, 132
               

               
Conread position:
               
137-389
               

               
Cow position:
               
chr20:41308915-41309168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
137-418
               

               
Cow position:
               
chr20:15437585-15437869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
30, 277
               

               
Conread position:
               
137-450
               

               
Cow position:
               
chr20:20732111-20732420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
117, 225
               

               
Conread position:
               
137-494
               

               
Cow position:
               
chr20:18490809-18491165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 163
               

               
Conread position:
               
137-501
               

               
Cow position:
               
chr20:10146329-10146699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
116, 307
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr20:2433041-2433414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
116, 306
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr20:4621719-4621354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr20:9419358-9418989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
116, 306
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr20:11887850-11887478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 324
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr20:13877087-13876714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 296
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr20:15777534-15777160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 309
               

               
Conread position:
               
137-505
               

               
Cow position:
               
chr20:37154104-37153731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 306
               

               
Conread position:
               
137-506
               

               
Cow position:
               
chr20:19845624-19846005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
137-542
               

               
Cow position:
               
chr20:34458411-34457998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 306
               

               
Conread position:
               
137-547
               

               
Cow position:
               
chr20:28324341-28324755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
116, 141
               

               
Conread position:
               
137-547
               

               
Cow position:
               
chr20:36854604-36855024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
116, 305
               

               
Conread position:
               
137-552
               

               
Cow position:
               
chr20:40781599-40782004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 144
               

               
Conread position:
               
137-568
               

               
Cow position:
               
chr20:6423591-6424031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 33
               

               
Conread position:
               
137-571
               

               
Cow position:
               
chr20:14436418-14436861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
116, 305
               

               
Conread position:
               
137-576
               

               
Cow position:
               
chr20:24399004-24398578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
138-466
               

               
Cow position:
               
chr20:3659077-3658747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 145
               

               
Conread position:
               
138-481
               

               
Cow position:
               
chr20:8446276-8446624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
115, 305
               

               
Conread position:
               
138-500
               

               
Cow position:
               
chr20:32087791-32088154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 148
               

               
Conread position:
               
138-563
               

               
Cow position:
               
chr20:39377516-39377113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
138-570
               

               
Cow position:
               
chr20:40256611-40257032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
138-571
               

               
Cow position:
               
chr20:30384382-30383939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
115, 121
               

               
Conread position:
               
139-438
               

               
Cow position:
               
chr20:20438170-20437863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
139-501
               

               
Cow position:
               
chr20:18169005-18169371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
139-505
               

               
Cow position:
               
chr20:17734152-17733784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 142
               

               
Conread position:
               
139-542
               

               
Cow position:
               
chr20:35094387-35094794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
139-551
               

               
Cow position:
               
chr20:35145631-35146063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
139-552
               

               
Cow position:
               
chr20:30817160-30817581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 258
               

               
Conread position:
               
139-566
               

               
Cow position:
               
chr20:22446013-22445589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 305
               

               
Conread position:
               
140-442
               

               
Cow position:
               
chr20:35113156-35113464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
140-463
               

               
Cow position:
               
chr20:8870459-8870131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
113, 303
               

               
Conread position:
               
140-505
               

               
Cow position:
               
chr20:8970043-8969677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
113, 301
               

               
Conread position:
               
140-505
               

               
Cow position:
               
chr20:33170246-33169882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 138
               

               
Conread position:
               
141-500
               

               
Cow position:
               
chr20:39137582-39137218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 305
               

               
Conread position:
               
141-505
               

               
Cow position:
               
chr20:31261365-31261713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
141-571
               

               
Cow position:
               
chr20:24543469-24543909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
112, 102
               

               
Conread position:
               
144-379
               

               
Cow position:
               
chr20:4335056-4334820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
144-530
               

               
Cow position:
               
chr20:28725914-28726307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 299
               

               
Conread position:
               
144-566
               

               
Cow position:
               
chr20:22896956-22897383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
109, 295
               

               
Conread position:
               
144-571
               

               
Cow position:
               
chr20:16189215-16188777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
109, 299
               

               
Conread position:
               
144-576
               

               
Cow position:
               
chr20:19460011-19459597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 47
               

               
Conread position:
               
146-297
               

               
Cow position:
               
chr20:17582438-17582590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
146-505
               

               
Cow position:
               
chr20:33531941-33532296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 226
               

               
Conread position:
               
146-535
               

               
Cow position:
               
chr20:6501432-6501826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
146-568
               

               
Cow position:
               
chr20:7131991-7132410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
148-468
               

               
Cow position:
               
chr20:41371596-41371922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
105, 300
               

               
Conread position:
               
148-505
               

               
Cow position:
               
chr20:19313432-19313073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 155
               

               
Conread position:
               
150-500
               

               
Cow position:
               
chr20:40304213-40303883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 233
               

               
Conread position:
               
151-563
               

               
Cow position:
               
chr20:11453719-11453305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 290
               

               
Conread position:
               
152-574
               

               
Cow position:
               
chr20:38817654-38818073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
153-299
               

               
Cow position:
               
chr20:382584-382440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 97
               

               
Conread position:
               
153-393
               

               
Cow position:
               
chr20:2907238-2907000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
101, 154
               

               
Conread position:
               
154-576
               

               
Cow position:
               
chr20:28982341-28982770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 121
               

               
Conread position:
               
156-500
               

               
Cow position:
               
chr20:39415396-39415730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
166, 97
               

               
Conread position:
               
157-429
               

               
Cow position:
               
chr20:24363288-24363558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
166, 11
               

               
Conread position:
               
157-505
               

               
Cow position:
               
chr20:17903801-17904150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 121
               

               
Conread position:
               
158-434
               

               
Cow position:
               
chr20:30482592-30482315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 124
               

               
Conread position:
               
158-500
               

               
Cow position:
               
chr20:35889123-35888781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 153
               

               
Conread position:
               
158-530
               

               
Cow position:
               
chr20:5576406-5576791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
159-450
               

               
Cow position:
               
chr20:646691-646985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
159-503
               

               
Cow position:
               
chr20:22920516-22920180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
159-506
               

               
Cow position:
               
chr20:25329632-25329992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
94, 294
               

               
Conread position:
               
160-536
               

               
Cow position:
               
chr20:39700751-39701130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 282
               

               
Conread position:
               
161-500
               

               
Cow position:
               
chr20:32636928-32636583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
164-560
               

               
Cow position:
               
chr20:19750960-19751359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 130
               

               
Conread position:
               
165-356
               

               
Cow position:
               
chr20:35133608-35133804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
165-425
               

               
Cow position:
               
chr20:26316163-26315903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
165-438
               

               
Cow position:
               
chr20:34375871-34376146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
7, 207
               

               
Conread position:
               
165-439
               

               
Cow position:
               
chr20:3891700-3891967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
88, 112
               

               
Conread position:
               
165-504
               

               
Cow position:
               
chr20:19352111-19351763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 126
               

               
Conread position:
               
165-504
               

               
Cow position:
               
chr20:38028343-38028022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
89, 129
               

               
Conread position:
               
165-505
               

               
Cow position:
               
chr20:12334032-12334365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 225
               

               
Conread position:
               
165-576
               

               
Cow position:
               
chr20:24069465-24069874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 144
               

               
Conread position:
               
166-500
               

               
Cow position:
               
chr20:41119574-41119897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 111
               

               
Conread position:
               
167-506
               

               
Cow position:
               
chr20:2882745-2883102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
86, 288
               

               
Conread position:
               
167-542
               

               
Cow position:
               
chr20:27299091-27298706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
62, 285
               

               
Conread position:
               
168-308
               

               
Cow position:
               
chr20:11482624-11482484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
168-576
               

               
Cow position:
               
chr20:20202869-20203286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 274
               

               
Conread position:
               
170-319
               

               
Cow position:
               
chr20:34899814-34899964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
170-386
               

               
Cow position:
               
chr20:8220107-8219895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
170-393
               

               
Cow position:
               
chr20:18609387-18609604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
170-439
               

               
Cow position:
               
chr20:10062061-10061796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
170-443
               

               
Cow position:
               
chr20:868897-868624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 160
               

               
Conread position:
               
170-445
               

               
Cow position:
               
chr20:23838194-23837914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
165, 85
               

               
Conread position:
               
170-459
               

               
Cow position:
               
chr20:24440087-24440383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
84, 279
               

               
Conread position:
               
170-488
               

               
Cow position:
               
chr20:13955700-13956013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 87
               

               
Conread position:
               
170-497
               

               
Cow position:
               
chr20:23164217-23163893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 266
               

               
Conread position:
               
170-499
               

               
Cow position:
               
chr20:23833792-23834115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
81, 71
               

               
Conread position:
               
170-504
               

               
Cow position:
               
chr20:6045740-6045442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
170-504
               

               
Cow position:
               
chr20:7110463-7110131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 276
               

               
Conread position:
               
170-531
               

               
Cow position:
               
chr20:6570987-6571346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 220
               

               
Conread position:
               
171-402
               

               
Cow position:
               
chr20:32614769-32614541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 93
               

               
Conread position:
               
171-443
               

               
Cow position:
               
chr20:13712448-13712194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
171-505
               

               
Cow position:
               
chr20:18185234-18185557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 220
               

               
Conread position:
               
171-542
               

               
Cow position:
               
chr20:3936041-3936422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 258
               

               
Conread position:
               
174-308
               

               
Cow position:
               
chr20:35907605-35907472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
176-450
               

               
Cow position:
               
chr20:32667651-32667931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
176-504
               

               
Cow position:
               
chr20:26881259-26880919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
78, 57
               

               
Conread position:
               
177-462
               

               
Cow position:
               
chr20:27895588-27895315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
103, 76
               

               
Conread position:
               
177-484
               

               
Cow position:
               
chr20:22959681-22959372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
177-504
               

               
Cow position:
               
chr20:34325905-34325573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 268
               

               
Conread position:
               
178-397
               

               
Cow position:
               
chr20:27000069-27000280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
75, 133
               

               
Conread position:
               
178-505
               

               
Cow position:
               
chr20:17806926-17806594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
75, 265
               

               
Conread position:
               
178-505
               

               
Cow position:
               
chr20:39543537-39543864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
27, 222
               

               
Conread position:
               
178-547
               

               
Cow position:
               
chr20:31252194-31252569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
178-571
               

               
Cow position:
               
chr20:6135101-6134697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
75, 265
               

               
Conread position:
               
178-574
               

               
Cow position:
               
chr20:33144891-33144487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
179-428
               

               
Cow position:
               
chr20:27195445-27195694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 225
               

               
Conread position:
               
179-536
               

               
Cow position:
               
chr20:8763551-8763913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
74, 115
               

               
Conread position:
               
180-505
               

               
Cow position:
               
chr20:7549923-7550229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
74, 97
               

               
Conread position:
               
181-339
               

               
Cow position:
               
chr20:25817919-25818073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
181-432
               

               
Cow position:
               
chr20:5782428-5782686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
69, 194
               

               
Conread position:
               
181-438
               

               
Cow position:
               
chr20:3159962-3160223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
181-456
               

               
Cow position:
               
chr20:30298416-30298698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
183-308
               

               
Cow position:
               
chr20:6889948-6890073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
183-438
               

               
Cow position:
               
chr20:13063771-13064028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 124
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr20:9279585-9279262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
70, 260
               

               
Conread position:
               
183-504
               

               
Cow position:
               
chr20:15577223-15576898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 94
               

               
Conread position:
               
183-549
               

               
Cow position:
               
chr20:15068816-15069180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 94
               

               
Conread position:
               
183-576
               

               
Cow position:
               
chr20:9412164-9412556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 145
               

               
Conread position:
               
183-576
               

               
Cow position:
               
chr20:31740544-31740151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 95
               

               
Conread position:
               
185-548
               

               
Cow position:
               
chr20:21345067-21345468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 373
               

               
Conread position:
               
189-506
               

               
Cow position:
               
chr20:30943502-30943185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
65, 91
               

               
Conread position:
               
190-491
               

               
Cow position:
               
chr20:27314349-27314661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 155
               

               
Conread position:
               
190-505
               

               
Cow position:
               
chr20:13450737-13450416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
63, 216
               

               
Conread position:
               
190-560
               

               
Cow position:
               
chr20:18392564-18392213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
191-359
               

               
Cow position:
               
chr20:31880476-31880645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
191-398
               

               
Cow position:
               
chr20:31854902-31854694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 152
               

               
Conread position:
               
191-437
               

               
Cow position:
               
chr20:27332023-27331773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 142
               

               
Conread position:
               
191-505
               

               
Cow position:
               
chr20:9126413-9126727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
191-505
               

               
Cow position:
               
chr20:11142768-11142449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
191-505
               

               
Cow position:
               
chr20:20565943-20566249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
62, 159
               

               
Conread position:
               
191-505
               

               
Cow position:
               
chr20:22216997-22217312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 213
               

               
Conread position:
               
191-505
               

               
Cow position:
               
chr20:35640711-35641030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
62, 252
               

               
Conread position:
               
191-505
               

               
Cow position:
               
chr20:36052074-36052377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
191-506
               

               
Cow position:
               
chr20:9588290-9588604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 206
               

               
Conread position:
               
191-506
               

               
Cow position:
               
chr20:11765929-11765616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
63, 123
               

               
Conread position:
               
191-535
               

               
Cow position:
               
chr20:15009407-15009757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
62, 252
               

               
Conread position:
               
191-535
               

               
Cow position:
               
chr20:23355142-23354792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
62, 252
               

               
Conread position:
               
191-564
               

               
Cow position:
               
chr20:18440514-18440135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
192-405
               

               
Cow position:
               
chr20:14287233-14287018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
192-505
               

               
Cow position:
               
chr20:19236768-19237068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
192-505
               

               
Cow position:
               
chr20:19328080-19328392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
193-319
               

               
Cow position:
               
chr20:38487036-38486909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
194-402
               

               
Cow position:
               
chr20:27510033-27510243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
194-505
               

               
Cow position:
               
chr20:8708084-8707768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
60, 249
               

               
Conread position:
               
194-547
               

               
Cow position:
               
chr20:16558628-16558265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
59, 249
               

               
Conread position:
               
194-552
               

               
Cow position:
               
chr20:28100382-28100748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
59, 249
               

               
Conread position:
               
194-562
               

               
Cow position:
               
chr20:16628381-16628760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
59, 249
               

               
Conread position:
               
194-563
               

               
Cow position:
               
chr20:31069321-31069686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
194-574
               

               
Cow position:
               
chr20:37435506-37435895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
59, 84
               

               
Conread position:
               
195-574
               

               
Cow position:
               
chr20:33435482-33435098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 88
               

               
Conread position:
               
196-398
               

               
Cow position:
               
chr20:20700659-20700455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
196-505
               

               
Cow position:
               
chr20:1580964-1581277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
196-505
               

               
Cow position:
               
chr20:6054822-6054525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
196-505
               

               
Cow position:
               
chr20:17251392-17251706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 127
               

               
Conread position:
               
198-574
               

               
Cow position:
               
chr20:35797287-35797678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
199-542
               

               
Cow position:
               
chr20:35064262-35063923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 86
               

               
Conread position:
               
200-564
               

               
Cow position:
               
chr20:32452050-32452426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
53, 243
               

               
Conread position:
               
200-575
               

               
Cow position:
               
chr20:13751934-13752290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
201-505
               

               
Cow position:
               
chr20:16407361-16407669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
52, 258
               

               
Conread position:
               
203-405
               

               
Cow position:
               
chr20:40396786-40396990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
203-443
               

               
Cow position:
               
chr20:32583818-32584061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
118, 83
               

               
Conread position:
               
203-444
               

               
Cow position:
               
chr20:2178426-2178179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
53, 166
               

               
Conread position:
               
203-450
               

               
Cow position:
               
chr20:39213585-39213337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 86
               

               
Conread position:
               
203-505
               

               
Cow position:
               
chr20:18399449-18399754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
204-364
               

               
Cow position:
               
chr20:8261502-8261664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 97
               

               
Conread position:
               
204-402
               

               
Cow position:
               
chr20:22953732-22953533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
204-428
               

               
Cow position:
               
chr20:1049952-1049723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
50, 179
               

               
Conread position:
               
204-448
               

               
Cow position:
               
chr20:32980920-32981163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
50, 124
               

               
Conread position:
               
204-462
               

               
Cow position:
               
chr20:9659846-9660098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
49, 97
               

               
Conread position:
               
204-505
               

               
Cow position:
               
chr20:24002018-24002303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 74
               

               
Conread position:
               
206-438
               

               
Cow position:
               
chr20:3388847-3388620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
206-442
               

               
Cow position:
               
chr20:36938031-36937793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
48, 187
               

               
Conread position:
               
206-503
               

               
Cow position:
               
chr20:42138067-42138362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
206-536
               

               
Cow position:
               
chr20:35158669-35158346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
302, 78
               

               
Conread position:
               
206-576
               

               
Cow position:
               
chr20:5998984-5998603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 202
               

               
Conread position:
               
206-576
               

               
Cow position:
               
chr20:39398171-39398549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 182
               

               
Conread position:
               
208-507
               

               
Cow position:
               
chr20:8101354-8101055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
45, 268
               

               
Conread position:
               
210-571
               

               
Cow position:
               
chr20:6240834-6240457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 242
               

               
Conread position:
               
212-506
               

               
Cow position:
               
chr20:207326-207028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
42, 86
               

               
Conread position:
               
212-552
               

               
Cow position:
               
chr20:30828290-30827942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 232
               

               
Conread position:
               
215-381
               

               
Cow position:
               
chr20:38670139-38670305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
215-438
               

               
Cow position:
               
chr20:37255582-37255345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
217-535
               

               
Cow position:
               
chr20:20469345-20469669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 226
               

               
Conread position:
               
218-503
               

               
Cow position:
               
chr20:39414424-39414132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
218-542
               

               
Cow position:
               
chr20:16515040-16514715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
219-425
               

               
Cow position:
               
chr20:35149415-35149626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
219-552
               

               
Cow position:
               
chr20:15761243-15760906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
220-454
               

               
Cow position:
               
chr20:12684472-12684229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
34, 148
               

               
Conread position:
               
223-570
               

               
Cow position:
               
chr20:7426481-7426135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
224-552
               

               
Cow position:
               
chr20:42469477-42469804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
225-457
               

               
Cow position:
               
chr20:38793829-38793592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 220
               

               
Conread position:
               
225-468
               

               
Cow position:
               
chr20:17738695-17738947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 186
               

               
Conread position:
               
225-503
               

               
Cow position:
               
chr20:39728161-39728437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
225-505
               

               
Cow position:
               
chr20:16291189-16291462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
225-534
               

               
Cow position:
               
chr20:3405789-3406094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
28, 215
               

               
Conread position:
               
225-551
               

               
Cow position:
               
chr20:23952335-23952663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chr20:33305346-33305547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 187
               

               
Conread position:
               
228-391
               

               
Cow position:
               
chr20:8096600-8096766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
228-487
               

               
Cow position:
               
chr20:42278421-42278682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
228-562
               

               
Cow position:
               
chr20:8082980-8083326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
228-571
               

               
Cow position:
               
chr20:36704553-36704908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
25, 216
               

               
Conread position:
               
229-350
               

               
Cow position:
               
chr20:5814393-5814271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
229-391
               

               
Cow position:
               
chr20:12835527-12835364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
229-398
               

               
Cow position:
               
chr20:29601984-29601813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
229-548
               

               
Cow position:
               
chr20:10884652-10884318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
229-576
               

               
Cow position:
               
chr20:25009926-25009564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
231-442
               

               
Cow position:
               
chr20:34089613-34089829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
232-438
               

               
Cow position:
               
chr20:39294576-39294785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
232-576
               

               
Cow position:
               
chr20:12582231-12581886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 156
               

               
Conread position:
               
233-435
               

               
Cow position:
               
chr20:24525632-24525828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
233-535
               

               
Cow position:
               
chr20:36390890-36390581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
13, 211
               

               
Conread position:
               
235-518
               

               
Cow position:
               
chr20:36997436-36997719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
236-444
               

               
Cow position:
               
chr20:31147817-31148018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
236-453
               

               
Cow position:
               
chr20:15597631-15597408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
236-464
               

               
Cow position:
               
chr20:7994601-7994382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
18, 144
               

               
Conread position:
               
236-535
               

               
Cow position:
               
chr20:39062449-39062754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 207
               

               
Conread position:
               
237-505
               

               
Cow position:
               
chr20:33743820-33744093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
16, 206
               

               
Conread position:
               
237-562
               

               
Cow position:
               
chr20:4727184-4727520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 206
               

               
Conread position:
               
238-505
               

               
Cow position:
               
chr20:20785547-20785819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
238-535
               

               
Cow position:
               
chr20:36614493-36614189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
8, 206
               

               
Conread position:
               
238-547
               

               
Cow position:
               
chr20:2768387-2768068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 205
               

               
Conread position:
               
239-571
               

               
Cow position:
               
chr20:36336738-36336396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 203
               

               
Conread position:
               
243-425
               

               
Cow position:
               
chr20:26058340-26058154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
245-504
               

               
Cow position:
               
chr20:20196875-20197129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 133
               

               
Conread position:
               
245-505
               

               
Cow position:
               
chr20:20201722-20201980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 115
               

               
Conread position:
               
245-506
               

               
Cow position:
               
chr20:22008761-22008503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
245-552
               

               
Cow position:
               
chr20:35958379-35958691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
246-560
               

               
Cow position:
               
chr20:31464647-31464327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
246-574
               

               
Cow position:
               
chr20:21714483-21714822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
247-459
               

               
Cow position:
               
chr20:32168111-32167894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
247-571
               

               
Cow position:
               
chr20:14803993-14804324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
6, 196
               

               
Conread position:
               
248-500
               

               
Cow position:
               
chr20:25686619-25686365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 196
               

               
Conread position:
               
251-443
               

               
Cow position:
               
chr20:12064366-12064561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
251-552
               

               
Cow position:
               
chr20:13967522-13967213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 146
               

               
Conread position:
               
251-553
               

               
Cow position:
               
chr20:7659472-7659173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 59
               

               
Conread position:
               
251-561
               

               
Cow position:
               
chr20:8703172-8702862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
251-571
               

               
Cow position:
               
chr20:3607215-3606897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
251-574
               

               
Cow position:
               
chr20:31799456-31799137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
207, 18
               

               
Conread position:
               
251-574
               

               
Cow position:
               
chr20:42310224-42309904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 153
               

               
Conread position:
               
252-481
               

               
Cow position:
               
chr20:26297815-26298048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
69, 190
               

               
Conread position:
               
252-574
               

               
Cow position:
               
chr20:34276649-34276319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
252-576
               

               
Cow position:
               
chr20:24521489-24521817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 190
               

               
Conread position:
               
253-562
               

               
Cow position:
               
chr20:10034191-10033865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 195
               

               
Conread position:
               
253-562
               

               
Cow position:
               
chr20:22064812-22065126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
254-576
               

               
Cow position:
               
chr20:5950889-5950575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
183, 23
               

               
Conread position:
               
255-467
               

               
Cow position:
               
chr20:33864416-33864203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
145, 5
               

               
Conread position:
               
255-507
               

               
Cow position:
               
chr20:15582294-15582045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
255-551
               

               
Cow position:
               
chr20:35999429-35999730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 89
               

               
Conread position:
               
256-448
               

               
Cow position:
               
chr20:29571507-29571312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
257-402
               

               
Cow position:
               
chr20:36039955-36040099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
258-505
               

               
Cow position:
               
chr20:38139649-38139899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 185
               

               
Conread position:
               
258-534
               

               
Cow position:
               
chr20:5089104-5089386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
69, 183
               

               
Conread position:
               
258-571
               

               
Cow position:
               
chr20:20492948-20492625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 184
               

               
Conread position:
               
261-446
               

               
Cow position:
               
chr20:35843362-35843178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
262-463
               

               
Cow position:
               
chr20:30856232-30856031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
264-542
               

               
Cow position:
               
chr20:42033074-42033359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 176
               

               
Conread position:
               
264-576
               

               
Cow position:
               
chr20:22235062-22235375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 180
               

               
Conread position:
               
265-505
               

               
Cow position:
               
chr20:26748581-26748824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 178
               

               
Conread position:
               
267-505
               

               
Cow position:
               
chr20:41703907-41704156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
267-551
               

               
Cow position:
               
chr20:40715435-40715722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
268-562
               

               
Cow position:
               
chr20:40008929-40009233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 174
               

               
Conread position:
               
269-438
               

               
Cow position:
               
chr20:34716624-34716450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
269-506
               

               
Cow position:
               
chr20:9049151-9048916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 109
               

               
Conread position:
               
270-498
               

               
Cow position:
               
chr20:40127580-40127352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
51, 141
               

               
Conread position:
               
271-562
               

               
Cow position:
               
chr20:35241893-35242194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 171
               

               
Conread position:
               
272-481
               

               
Cow position:
               
chr20:31886230-31886017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
49, 170
               

               
Conread position:
               
274-445
               

               
Cow position:
               
chr20:39050419-39050243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
275-505
               

               
Cow position:
               
chr20:11341044-11340808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
276-530
               

               
Cow position:
               
chr20:14650679-14650418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
51, 168
               

               
Conread position:
               
276-568
               

               
Cow position:
               
chr20:39517774-39518067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
277-495
               

               
Cow position:
               
chr20:21016243-21016463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
162, 38
               

               
Conread position:
               
277-505
               

               
Cow position:
               
chr20:10372535-10372303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
50, 167
               

               
Conread position:
               
277-530
               

               
Cow position:
               
chr20:15431928-15432188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 167
               

               
Conread position:
               
277-552
               

               
Cow position:
               
chr20:10200104-10200389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 171
               

               
Conread position:
               
277-562
               

               
Cow position:
               
chr20:10208568-10208862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
118, 6
               

               
Conread position:
               
277-568
               

               
Cow position:
               
chr20:9489629-9489329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
44, 165
               

               
Conread position:
               
277-576
               

               
Cow position:
               
chr20:15549135-15548828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 110
               

               
Conread position:
               
278-551
               

               
Cow position:
               
chr20:36207570-36207850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
117, 6
               

               
Conread position:
               
278-562
               

               
Cow position:
               
chr20:20312973-20312693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
279-542
               

               
Cow position:
               
chr20:10338060-10337789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 86
               

               
Conread position:
               
279-558
               

               
Cow position:
               
chr20:32512748-32513044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 244
               

               
Conread position:
               
280-481
               

               
Cow position:
               
chr20:1640681-1640477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 177
               

               
Conread position:
               
281-505
               

               
Cow position:
               
chr20:3331527-3331297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
284-504
               

               
Cow position:
               
chr20:20360003-20359795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 28
               

               
Conread position:
               
284-530
               

               
Cow position:
               
chr20:22683686-22683437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 159
               

               
Conread position:
               
284-547
               

               
Cow position:
               
chr20:38873239-38872969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
286-497
               

               
Cow position:
               
chr20:17584187-17584400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
286-571
               

               
Cow position:
               
chr20:38861425-38861131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
35, 155
               

               
Conread position:
               
288-469
               

               
Cow position:
               
chr20:12783971-12784150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 166
               

               
Conread position:
               
288-503
               

               
Cow position:
               
chr20:19238656-19238440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
288-504
               

               
Cow position:
               
chr20:14679392-14679610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
288-562
               

               
Cow position:
               
chr20:30777950-30778223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
289-443
               

               
Cow position:
               
chr20:886805-886965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
33, 89
               

               
Conread position:
               
289-445
               

               
Cow position:
               
chr20:10576015-10575860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
289-458
               

               
Cow position:
               
chr20:14620497-14620328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
117, 153
               

               
Conread position:
               
289-471
               

               
Cow position:
               
chr20:1140000-1139819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
289-493
               

               
Cow position:
               
chr20:5407977-5407774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
289-493
               

               
Cow position:
               
chr20:29633216-29633022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
38, 101
               

               
Conread position:
               
289-500
               

               
Cow position:
               
chr20:25823059-25823270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 42
               

               
Conread position:
               
289-503
               

               
Cow position:
               
chr20:20557879-20557662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 182
               

               
Conread position:
               
289-504
               

               
Cow position:
               
chr20:220393-220611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
106, 38
               

               
Conread position:
               
289-504
               

               
Cow position:
               
chr20:17669957-17670171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 155
               

               
Conread position:
               
289-504
               

               
Cow position:
               
chr20:32578145-32577935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
289-505
               

               
Cow position:
               
chr20:4205738-4205958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 157
               

               
Conread position:
               
289-505
               

               
Cow position:
               
chr20:17363913-17363696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
289-505
               

               
Cow position:
               
chr20:29805882-29805671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
289-505
               

               
Cow position:
               
chr20:34918055-34918262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
289-547
               

               
Cow position:
               
chr20:36256456-36256717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
39, 136
               

               
Conread position:
               
289-547
               

               
Cow position:
               
chr20:41028266-41028529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 38
               

               
Conread position:
               
289-561
               

               
Cow position:
               
chr20:35364827-35365099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
205, 97
               

               
Conread position:
               
289-568
               

               
Cow position:
               
chr20:39019471-39019756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 145
               

               
Conread position:
               
289-571
               

               
Cow position:
               
chr20:8556495-8556206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
290-442
               

               
Cow position:
               
chr20:14403201-14403045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
290-471
               

               
Cow position:
               
chr20:13829043-13829224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
290-504
               

               
Cow position:
               
chr20:15148237-15148024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 162
               

               
Conread position:
               
290-504
               

               
Cow position:
               
chr20:20471566-20471771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
290-505
               

               
Cow position:
               
chr20:22007280-22007491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
290-505
               

               
Cow position:
               
chr20:40185897-40185691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
290-506
               

               
Cow position:
               
chr20:18618415-18618625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
290-507
               

               
Cow position:
               
chr20:10838443-10838223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
290-547
               

               
Cow position:
               
chr20:14759888-14759627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
35, 142
               

               
Conread position:
               
290-560
               

               
Cow position:
               
chr20:14735453-14735721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 75
               

               
Conread position:
               
290-573
               

               
Cow position:
               
chr20:18551139-18551420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
290-574
               

               
Cow position:
               
chr20:7442348-7442066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
290-574
               

               
Cow position:
               
chr20:42459075-42458790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
290-576
               

               
Cow position:
               
chr20:12420845-12420550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 154
               

               
Conread position:
               
290-576
               

               
Cow position:
               
chr20:23505605-23505896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 138
               

               
Conread position:
               
291-499
               

               
Cow position:
               
chr20:37200137-37200343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
291-505
               

               
Cow position:
               
chr20:11923464-11923252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
291-572
               

               
Cow position:
               
chr20:41627567-41627289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
291-576
               

               
Cow position:
               
chr20:26996311-26996598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
292-436
               

               
Cow position:
               
chr20:31311080-31311227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
292-505
               

               
Cow position:
               
chr20:35009962-35009753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
292-560
               

               
Cow position:
               
chr20:22704066-22704347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 153
               

               
Conread position:
               
292-562
               

               
Cow position:
               
chr20:38578976-38578706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
205, 35
               

               
Conread position:
               
293-505
               

               
Cow position:
               
chr20:11741524-11741310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
105, 152
               

               
Conread position:
               
293-505
               

               
Cow position:
               
chr20:23936635-23936417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
293-548
               

               
Cow position:
               
chr20:5826716-5826983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 152
               

               
Conread position:
               
294-535
               

               
Cow position:
               
chr20:33831647-33831893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
39, 152
               

               
Conread position:
               
294-551
               

               
Cow position:
               
chr20:24135485-24135229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
294-562
               

               
Cow position:
               
chr20:40511977-40511702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 145
               

               
Conread position:
               
296-468
               

               
Cow position:
               
chr20:13023696-13023521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
297-562
               

               
Cow position:
               
chr20:15235547-15235815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
298-505
               

               
Cow position:
               
chr20:5025518-5025314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
298-505
               

               
Cow position:
               
chr20:26679908-26680116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
298-505
               

               
Cow position:
               
chr20:35907261-35907061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
298-518
               

               
Cow position:
               
chr20:39675609-39675384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
298-547
               

               
Cow position:
               
chr20:41452022-41451767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 142
               

               
Conread position:
               
298-552
               

               
Cow position:
               
chr20:6890489-6890757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
298-557
               

               
Cow position:
               
chr20:33975142-33975410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
298-576
               

               
Cow position:
               
chr20:38768669-38768392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
299-402
               

               
Cow position:
               
chr20:39154675-39154571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
299-480
               

               
Cow position:
               
chr20:24902687-24902497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 151
               

               
Conread position:
               
300-557
               

               
Cow position:
               
chr20:6848408-6848678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
302-461
               

               
Cow position:
               
chr20:22850950-22851100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
302-471
               

               
Cow position:
               
chr20:19155140-19154967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
302-493
               

               
Cow position:
               
chr20:14879574-14879765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
25, 142
               

               
Conread position:
               
302-504
               

               
Cow position:
               
chr20:19265945-19266144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
302-526
               

               
Cow position:
               
chr20:7182888-7182661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 142
               

               
Conread position:
               
302-552
               

               
Cow position:
               
chr20:34776974-34777223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
302-561
               

               
Cow position:
               
chr20:28296078-28296344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 141
               

               
Conread position:
               
302-574
               

               
Cow position:
               
chr20:11482351-11482068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
25, 144
               

               
Conread position:
               
303-439
               

               
Cow position:
               
chr20:4875066-4874932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 114
               

               
Conread position:
               
303-533
               

               
Cow position:
               
chr20:7600988-7600756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
141, 65
               

               
Conread position:
               
303-548
               

               
Cow position:
               
chr20:20945131-20945374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
304-504
               

               
Cow position:
               
chr20:8020685-8020887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
91, 140
               

               
Conread position:
               
304-507
               

               
Cow position:
               
chr20:34251888-34251685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
305-505
               

               
Cow position:
               
chr20:9379200-9379400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
306-454
               

               
Cow position:
               
chr20:22029730-22029886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
306-541
               

               
Cow position:
               
chr20:382335-382091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
17, 215
               

               
Conread position:
               
306-548
               

               
Cow position:
               
chr20:36331636-36331391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 139
               

               
Conread position:
               
306-568
               

               
Cow position:
               
chr20:12239886-12239620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
98, 5
               

               
Conread position:
               
307-553
               

               
Cow position:
               
chr20:38551167-38551416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
309-470
               

               
Cow position:
               
chr20:35604255-35604089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
309-471
               

               
Cow position:
               
chr20:5116509-5116345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 134
               

               
Conread position:
               
310-489
               

               
Cow position:
               
chr20:29754582-29754760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
310-505
               

               
Cow position:
               
chr20:38486752-38486557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
12, 116
               

               
Conread position:
               
310-505
               

               
Cow position:
               
chr20:39325181-39325380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
11, 153
               

               
Conread position:
               
310-541
               

               
Cow position:
               
chr20:2913758-2913995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 96
               

               
Conread position:
               
313-503
               

               
Cow position:
               
chr20:16941524-16941321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 198
               

               
Conread position:
               
313-503
               

               
Cow position:
               
chr20:20351190-20350999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
313-503
               

               
Cow position:
               
chr20:33178727-33178532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 158
               

               
Conread position:
               
313-552
               

               
Cow position:
               
chr20:15566032-15565784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
315-551
               

               
Cow position:
               
chr20:15544097-15543855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
315-562
               

               
Cow position:
               
chr20:15593097-15593352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
7, 133
               

               
Conread position:
               
316-505
               

               
Cow position:
               
chr20:20739487-20739296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
316-505
               

               
Cow position:
               
chr20:28067623-28067437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
317-530
               

               
Cow position:
               
chr20:5269266-5269055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
318-506
               

               
Cow position:
               
chr20:35760475-35760661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
5, 87
               

               
Conread position:
               
319-451
               

               
Cow position:
               
chr20:20899041-20899170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
129, 39
               

               
Conread position:
               
319-500
               

               
Cow position:
               
chr20:13994615-13994799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
75, 126
               

               
Conread position:
               
319-576
               

               
Cow position:
               
chr20:23846867-23846597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
9, 125
               

               
Conread position:
               
319-576
               

               
Cow position:
               
chr20:31323602-31323856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
8, 113
               

               
Conread position:
               
321-504
               

               
Cow position:
               
chr20:11043688-11043513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
321-505
               

               
Cow position:
               
chr20:6602849-6603030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
321-505
               

               
Cow position:
               
chr20:32069049-32068862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 124
               

               
Conread position:
               
321-505
               

               
Cow position:
               
chr20:34098150-34097967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
163, 119
               

               
Conread position:
               
321-505
               

               
Cow position:
               
chr20:34107924-34108102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
321-546
               

               
Cow position:
               
chr20:27408067-27407837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
321-548
               

               
Cow position:
               
chr20:9988391-9988619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 123
               

               
Conread position:
               
321-562
               

               
Cow position:
               
chr20:18423529-18423755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
234, 119
               

               
Conread position:
               
321-562
               

               
Cow position:
               
chr20:38415163-38414934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
77, 122
               

               
Conread position:
               
321-574
               

               
Cow position:
               
chr20:8607112-8606862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 124
               

               
Conread position:
               
321-576
               

               
Cow position:
               
chr20:11542475-11542220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
322-505
               

               
Cow position:
               
chr20:21928714-21928896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
323-576
               

               
Cow position:
               
chr20:32084274-32084011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
327-566
               

               
Cow position:
               
chr20:37165540-37165772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
226, 113
               

               
Conread position:
               
329-505
               

               
Cow position:
               
chr20:34240340-34240525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
329-548
               

               
Cow position:
               
chr20:11864320-11864094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 175
               

               
Conread position:
               
329-563
               

               
Cow position:
               
chr20:34364851-34365082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
168, 46
               

               
Conread position:
               
329-574
               

               
Cow position:
               
chr20:14980698-14980443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
331-546
               

               
Cow position:
               
chr20:3740183-3739967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
11, 198
               

               
Conread position:
               
335-548
               

               
Cow position:
               
chr20:37272538-37272754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
339-576
               

               
Cow position:
               
chr20:2204839-2204617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
216, 62
               

               
Conread position:
               
340-505
               

               
Cow position:
               
chr20:3569233-3569076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
340-572
               

               
Cow position:
               
chr20:16935476-16935246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
347-576
               

               
Cow position:
               
chr20:7439015-7438783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
158, 23
               

               
Conread position:
               
348-574
               

               
Cow position:
               
chr20:28831798-28832037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
349-505
               

               
Cow position:
               
chr20:3321302-3321151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
349-576
               

               
Cow position:
               
chr20:3254884-3255104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
350-548
               

               
Cow position:
               
chr20:271586-271384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 62
               

               
Conread position:
               
350-574
               

               
Cow position:
               
chr20:15569114-15568883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
9, 96
               

               
Conread position:
               
351-499
               

               
Cow position:
               
chr20:35995307-35995458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
60, 94
               

               
Conread position:
               
352-558
               

               
Cow position:
               
chr20:5814409-5814615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
353-494
               

               
Cow position:
               
chr20:9701735-9701597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
355-552
               

               
Cow position:
               
chr20:13025765-13025571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
156, 10
               

               
Conread position:
               
357-562
               

               
Cow position:
               
chr20:8307857-8308074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 87
               

               
Conread position:
               
358-505
               

               
Cow position:
               
chr20:32988987-32988849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
120, 40
               

               
Conread position:
               
358-506
               

               
Cow position:
               
chr20:15312504-15312655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 87
               

               
Conread position:
               
358-552
               

               
Cow position:
               
chr20:5755268-5755450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
358-568
               

               
Cow position:
               
chr20:20241945-20242138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
358-571
               

               
Cow position:
               
chr20:5636325-5636544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
38, 87
               

               
Conread position:
               
359-548
               

               
Cow position:
               
chr20:21761622-21761814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 133
               

               
Conread position:
               
360-548
               

               
Cow position:
               
chr20:41309383-41309579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
362-558
               

               
Cow position:
               
chr20:39247759-39247961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
364-534
               

               
Cow position:
               
chr20:18837310-18837130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
364-558
               

               
Cow position:
               
chr20:36010640-36010844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 175
               

               
Conread position:
               
365-505
               

               
Cow position:
               
chr20:14917152-14917292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 129
               

               
Conread position:
               
366-560
               

               
Cow position:
               
chr20:4334667-4334478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 38
               

               
Conread position:
               
366-560
               

               
Cow position:
               
chr20:41089941-41089742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
366-562
               

               
Cow position:
               
chr20:7210889-7211094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
369-502
               

               
Cow position:
               
chr20:9729941-9730070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
373-562
               

               
Cow position:
               
chr20:14433568-14433370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
127, 190
               

               
Conread position:
               
374-574
               

               
Cow position:
               
chr20:30710789-30710578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 193
               

               
Conread position:
               
375-547
               

               
Cow position:
               
chr20:40446191-40446370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
376-575
               

               
Cow position:
               
chr20:8546931-8547135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
377-552
               

               
Cow position:
               
chr20:22484724-22484905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 158
               

               
Conread position:
               
380-506
               

               
Cow position:
               
chr20:22721887-22722015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
381-498
               

               
Cow position:
               
chr20:4892954-4892836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
385-571
               

               
Cow position:
               
chr20:2298905-2298723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
389-489
               

               
Cow position:
               
chr20:5633482-5633382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
390-571
               

               
Cow position:
               
chr20:36633694-36633880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
395-570
               

               
Cow position:
               
chr20:32463639-32463458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
396-552
               

               
Cow position:
               
chr20:24000915-24000754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
401-576
               

               
Cow position:
               
chr20:39267071-39266889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
416-575
               

               
Cow position:
               
chr20:7738323-7738164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
110, 25
               
Show alignments to all cow chromosomes.