Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rret33_d17.5
        

               Conread position:
               93-505
               

               Cow position:
               chrX:19196956-19196539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               39, 11
               

               Conread position:
               99-448
               

               Cow position:
               chrX:35633193-35632834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               21, 198
               

               Conread position:
               99-506
               

               Cow position:
               chrX:20888077-20887670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 27
               

               Conread position:
               105-454
               

               Cow position:
               chrX:3161449-3161090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               105-504
               

               Cow position:
               chrX:32743109-32743508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 309
               

               Conread position:
               105-562
               

               Cow position:
               chrX:2362072-2362541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 339
               

               Conread position:
               106-489
               

               Cow position:
               chrX:48248394-48248786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 362
               

               Conread position:
               106-552
               

               Cow position:
               chrX:42994188-42994640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 265
               

               Conread position:
               106-571
               

               Cow position:
               chrX:42171730-42171247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 181
               

               Conread position:
               108-505
               

               Cow position:
               chrX:32010605-32011010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 338
               

               Conread position:
               110-431
               

               Cow position:
               chrX:41433840-41433521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               110-438
               

               Cow position:
               chrX:45467641-45467306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               112-419
               

               Cow position:
               chrX:9593554-9593246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               141, 292
               

               Conread position:
               113-289
               

               Cow position:
               chrX:8517185-8517367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               113-463
               

               Cow position:
               chrX:33822679-33823034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               114-333
               

               Cow position:
               chrX:42728528-42728756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               114-405
               

               Cow position:
               chrX:11377151-11377452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               114-429
               

               Cow position:
               chrX:41306052-41305729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               15, 206
               

               Conread position:
               114-445
               

               Cow position:
               chrX:2465703-2465360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               114-502
               

               Cow position:
               chrX:35409248-35409628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 215
               

               Conread position:
               114-505
               

               Cow position:
               chrX:45413067-45412685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 15
               

               Conread position:
               115-293
               

               Cow position:
               chrX:11855752-11855929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 163
               

               Conread position:
               115-295
               

               Cow position:
               chrX:38641784-38641960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               115-298
               

               Cow position:
               chrX:33493315-33493501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               115-313
               

               Cow position:
               chrX:43980328-43980534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 154
               

               Conread position:
               115-391
               

               Cow position:
               chrX:2351645-2351924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               115-402
               

               Cow position:
               chrX:4325907-4325624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               110, 9
               

               Conread position:
               115-408
               

               Cow position:
               chrX:20957598-20957896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               115-418
               

               Cow position:
               chrX:47219672-47219367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               17, 298
               

               Conread position:
               115-439
               

               Cow position:
               chrX:10916331-10916659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 270
               

               Conread position:
               115-450
               

               Cow position:
               chrX:29049558-29049883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               115-482
               

               Cow position:
               chrX:45967744-45968111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 280
               

               Conread position:
               115-500
               

               Cow position:
               chrX:160457-160063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 171
               

               Conread position:
               115-500
               

               Cow position:
               chrX:42462165-42461775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 331
               

               Conread position:
               115-504
               

               Cow position:
               chrX:38094942-38094548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 253
               

               Conread position:
               115-505
               

               Cow position:
               chrX:21592869-21593262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 163
               

               Conread position:
               115-505
               

               Cow position:
               chrX:38439059-38439452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 61
               

               Conread position:
               115-544
               

               Cow position:
               chrX:151486-151924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               115-547
               

               Cow position:
               chrX:20582613-20583044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 292
               

               Conread position:
               115-551
               

               Cow position:
               chrX:27442969-27442531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 164
               

               Conread position:
               115-563
               

               Cow position:
               chrX:38963696-38964145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 45
               

               Conread position:
               115-564
               

               Cow position:
               chrX:1055809-1055349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 218
               

               Conread position:
               115-570
               

               Cow position:
               chrX:13648201-13647739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 273
               

               Conread position:
               115-570
               

               Cow position:
               chrX:42086446-42086893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 199
               

               Conread position:
               115-571
               

               Cow position:
               chrX:11655660-11656128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 343
               

               Conread position:
               115-576
               

               Cow position:
               chrX:11073628-11073139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 335
               

               Conread position:
               116-402
               

               Cow position:
               chrX:12810700-12810991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               116-419
               

               Cow position:
               chrX:26506355-26506055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               112, 8
               

               Conread position:
               116-506
               

               Cow position:
               chrX:40180284-40179900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 13
               

               Conread position:
               116-548
               

               Cow position:
               chrX:17497682-17498108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 13
               

               Conread position:
               116-548
               

               Cow position:
               chrX:22812648-22813091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 13
               

               Conread position:
               116-553
               

               Cow position:
               chrX:44192857-44192419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 79
               

               Conread position:
               116-571
               

               Cow position:
               chrX:9011913-9012366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               137, 8
               

               Conread position:
               117-443
               

               Cow position:
               chrX:37377673-37377348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               137, 58
               

               Conread position:
               117-501
               

               Cow position:
               chrX:3361407-3361793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               258
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               136, 47
               

               Conread position:
               117-505
               

               Cow position:
               chrX:3417553-3417161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 325
               

               Conread position:
               117-576
               

               Cow position:
               chrX:45501731-45502198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 339
               

               Conread position:
               118-300
               

               Cow position:
               chrX:31745913-31745727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               118-471
               

               Cow position:
               chrX:29915638-29915281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               135, 151
               

               Conread position:
               118-498
               

               Cow position:
               chrX:1810575-1810193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 61
               

               Conread position:
               118-549
               

               Cow position:
               chrX:28866403-28865979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 60
               

               Conread position:
               118-576
               

               Cow position:
               chrX:6413632-6414099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 246
               

               Conread position:
               118-576
               

               Cow position:
               chrX:47144660-47145137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               319
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               12, 63
               

               Conread position:
               119-455
               

               Cow position:
               chrX:19674233-19674577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               9, 327
               

               Conread position:
               119-505
               

               Cow position:
               chrX:23139898-23140288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 148
               

               Conread position:
               119-505
               

               Cow position:
               chrX:27760926-27761321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               11, 327
               

               Conread position:
               119-505
               

               Cow position:
               chrX:39292158-39291782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 233
               

               Conread position:
               119-571
               

               Cow position:
               chrX:14458582-14458123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               299
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               9, 162
               

               Conread position:
               119-573
               

               Cow position:
               chrX:5289102-5288634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 329
               

               Conread position:
               120-282
               

               Cow position:
               chrX:1499174-1499346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               120-289
               

               Cow position:
               chrX:44961299-44961472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               120-333
               

               Cow position:
               chrX:35025390-35025605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               100, 170
               

               Conread position:
               120-500
               

               Cow position:
               chrX:21666005-21665623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 151
               

               Conread position:
               120-552
               

               Cow position:
               chrX:5871903-5872344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 9
               

               Conread position:
               120-560
               

               Cow position:
               chrX:41122657-41123098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 61
               

               Conread position:
               120-564
               

               Cow position:
               chrX:40481285-40480831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 107
               

               Conread position:
               120-571
               

               Cow position:
               chrX:35223888-35224343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 218
               

               Conread position:
               120-575
               

               Cow position:
               chrX:13785792-13785309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 292
               

               Conread position:
               121-560
               

               Cow position:
               chrX:14162781-14163228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 324
               

               Conread position:
               123-506
               

               Cow position:
               chrX:15590280-15589895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 319
               

               Conread position:
               124-504
               

               Cow position:
               chrX:10831919-10831520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 333
               

               Conread position:
               124-504
               

               Cow position:
               chrX:38967244-38967621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 145
               

               Conread position:
               126-402
               

               Cow position:
               chrX:36678078-36677797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 147
               

               Conread position:
               126-426
               

               Cow position:
               chrX:5455105-5454809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               128, 40
               

               Conread position:
               127-500
               

               Cow position:
               chrX:30543691-30543319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               127-503
               

               Cow position:
               chrX:24200791-24201159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 182
               

               Conread position:
               127-505
               

               Cow position:
               chrX:19019496-19019132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 140
               

               Conread position:
               127-505
               

               Cow position:
               chrX:24413626-24414009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               126, 309
               

               Conread position:
               127-506
               

               Cow position:
               chrX:1331529-1331915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 64
               

               Conread position:
               127-563
               

               Cow position:
               chrX:27594584-27594139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               126, 165
               

               Conread position:
               127-571
               

               Cow position:
               chrX:9128652-9129107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               126, 316
               

               Conread position:
               127-571
               

               Cow position:
               chrX:14781749-14781294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               126, 316
               

               Conread position:
               127-571
               

               Cow position:
               chrX:30816673-30816218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               126, 316
               

               Conread position:
               128-298
               

               Cow position:
               chrX:25163390-25163561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 107
               

               Conread position:
               128-300
               

               Cow position:
               chrX:38549006-38549181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               56, 161
               

               Conread position:
               128-331
               

               Cow position:
               chrX:15232035-15231826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               49, 75
               

               Conread position:
               128-331
               

               Cow position:
               chrX:30093767-30093564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               124, 149
               

               Conread position:
               128-403
               

               Cow position:
               chrX:19540758-19540473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               128-412
               

               Cow position:
               chrX:3570048-3570336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               128-419
               

               Cow position:
               chrX:32182439-32182133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 73
               

               Conread position:
               128-439
               

               Cow position:
               chrX:9970520-9970832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               36, 168
               

               Conread position:
               128-458
               

               Cow position:
               chrX:12437638-12437325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 95
               

               Conread position:
               128-489
               

               Cow position:
               chrX:36840458-36840834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               260
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               49, 212
               

               Conread position:
               128-498
               

               Cow position:
               chrX:35609583-35609956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 42
               

               Conread position:
               128-499
               

               Cow position:
               chrX:3654206-3654576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 42
               

               Conread position:
               128-502
               

               Cow position:
               chrX:14908608-14908987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 111
               

               Conread position:
               128-505
               

               Cow position:
               chrX:14819309-14819693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               128-506
               

               Cow position:
               chrX:14407853-14407472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               261
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               125, 210
               

               Conread position:
               128-507
               

               Cow position:
               chrX:21626363-21625970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 139
               

               Conread position:
               128-530
               

               Cow position:
               chrX:20878165-20877756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 64
               

               Conread position:
               128-538
               

               Cow position:
               chrX:7054135-7053724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 62
               

               Conread position:
               128-552
               

               Cow position:
               chrX:11581534-11581960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 79
               

               Conread position:
               128-552
               

               Cow position:
               chrX:28133946-28134368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 157
               

               Conread position:
               128-552
               

               Cow position:
               chrX:43730593-43730196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               295
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               125, 31
               

               Conread position:
               128-560
               

               Cow position:
               chrX:38577129-38577547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 173
               

               Conread position:
               129-284
               

               Cow position:
               chrX:37781483-37781331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               123, 38
               

               Conread position:
               129-293
               

               Cow position:
               chrX:23969956-23970121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               129-296
               

               Cow position:
               chrX:3596469-3596301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-299
               

               Cow position:
               chrX:30688663-30688834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-303
               

               Cow position:
               chrX:30825246-30825421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-327
               

               Cow position:
               chrX:2715220-2715420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-329
               

               Cow position:
               chrX:16222224-16222425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               124, 103
               

               Conread position:
               129-329
               

               Cow position:
               chrX:22522233-22522031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-329
               

               Cow position:
               chrX:24975542-24975737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               124, 28
               

               Conread position:
               129-329
               

               Cow position:
               chrX:28314023-28314225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-329
               

               Cow position:
               chrX:34006911-34007113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-329
               

               Cow position:
               chrX:39185771-39185973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-398
               

               Cow position:
               chrX:10992216-10992487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-424
               

               Cow position:
               chrX:6454294-6454589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               124, 8
               

               Conread position:
               129-433
               

               Cow position:
               chrX:5408653-5408963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-450
               

               Cow position:
               chrX:5892826-5893152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-455
               

               Cow position:
               chrX:9153958-9154289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-455
               

               Cow position:
               chrX:30965699-30966030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-471
               

               Cow position:
               chrX:30052871-30052528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               124, 323
               

               Conread position:
               129-472
               

               Cow position:
               chrX:15091171-15090821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               45, 107
               

               Conread position:
               129-496
               

               Cow position:
               chrX:7119046-7118673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               129-498
               

               Cow position:
               chrX:15346371-15345997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chrX:4343347-4343728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chrX:10495831-10496212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chrX:13447868-13448249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chrX:14122153-14121773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 90
               

               Conread position:
               129-505
               

               Cow position:
               chrX:16703268-16703649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chrX:23047378-23047757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               252
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               124, 312
               

               Conread position:
               129-505
               

               Cow position:
               chrX:23109360-23109736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               258
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               124, 130
               

               Conread position:
               129-505
               

               Cow position:
               chrX:24509465-24509846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chrX:25276901-25276520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chrX:28058197-28057816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-505
               

               Cow position:
               chrX:31814291-31813910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               257
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               124, 208
               

               Conread position:
               129-505
               

               Cow position:
               chrX:32039244-32038864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 10
               

               Conread position:
               129-505
               

               Cow position:
               chrX:32331229-32331608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               124, 180
               

               Conread position:
               129-505
               

               Cow position:
               chrX:42459770-42460159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               259
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               124, 322
               

               Conread position:
               129-507
               

               Cow position:
               chrX:36692837-36693212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 49
               

               Conread position:
               129-530
               

               Cow position:
               chrX:16711552-16711961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 315
               

               Conread position:
               129-533
               

               Cow position:
               chrX:47318004-47318416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chrX:2417886-2417474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chrX:2664607-2665019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chrX:3387704-3388116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chrX:5423468-5423056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               267
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chrX:5646506-5646094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chrX:12001549-12001137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chrX:22557099-22557510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               125, 314
               

               Conread position:
               129-535
               

               Cow position:
               chrX:22608994-22608582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chrX:30836971-30837373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               124, 275
               

               Conread position:
               129-535
               

               Cow position:
               chrX:31605282-31605694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chrX:33763942-33764354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-535
               

               Cow position:
               chrX:36729982-36730396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 316
               

               Conread position:
               129-535
               

               Cow position:
               chrX:37958095-37958506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-542
               

               Cow position:
               chrX:15504889-15505312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-542
               

               Cow position:
               chrX:30196895-30197318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-547
               

               Cow position:
               chrX:19109443-19109015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-547
               

               Cow position:
               chrX:30199394-30198966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               282
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-547
               

               Cow position:
               chrX:41488567-41488140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-548
               

               Cow position:
               chrX:11358467-11358040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-549
               

               Cow position:
               chrX:36195690-36196117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               279
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-550
               

               Cow position:
               chrX:7742859-7742430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               280
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-551
               

               Cow position:
               chrX:34754594-34754166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 316
               

               Conread position:
               129-552
               

               Cow position:
               chrX:29226074-29226503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-554
               

               Cow position:
               chrX:7311591-7312026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               284
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-562
               

               Cow position:
               chrX:1975999-1975556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-562
               

               Cow position:
               chrX:3078989-3078546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 313
               

               Conread position:
               129-562
               

               Cow position:
               chrX:3157216-3157660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-562
               

               Cow position:
               chrX:9018705-9018261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-562
               

               Cow position:
               chrX:15781179-15781623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-562
               

               Cow position:
               chrX:18451481-18451049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               124, 268
               

               Conread position:
               129-562
               

               Cow position:
               chrX:19774882-19774438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-564
               

               Cow position:
               chrX:19495362-19494915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-564
               

               Cow position:
               chrX:37061193-37060746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-568
               

               Cow position:
               chrX:1781503-1781954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 315
               

               Conread position:
               129-571
               

               Cow position:
               chrX:4622356-4621903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chrX:5406656-5407106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               297
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               124, 204
               

               Conread position:
               129-571
               

               Cow position:
               chrX:6196156-6195703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chrX:11663776-11664229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chrX:11715864-11715411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chrX:16285809-16286260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               297
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               124, 73
               

               Conread position:
               129-571
               

               Cow position:
               chrX:16735122-16735575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               290
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chrX:19022711-19022258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chrX:20032233-20031783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               293
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               124, 284
               

               Conread position:
               129-571
               

               Cow position:
               chrX:27404347-27403895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 313
               

               Conread position:
               129-571
               

               Cow position:
               chrX:30172112-30171659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chrX:30752372-30752825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               294
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chrX:30822182-30822635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-571
               

               Cow position:
               chrX:34285466-34285012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               298
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               124, 315
               

               Conread position:
               129-571
               

               Cow position:
               chrX:44168712-44168258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 315
               

               Conread position:
               129-574
               

               Cow position:
               chrX:10922973-10922531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-574
               

               Cow position:
               chrX:16478513-16478954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               124, 91
               

               Conread position:
               129-574
               

               Cow position:
               chrX:20098920-20099362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-574
               

               Cow position:
               chrX:34413374-34413828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-574
               

               Cow position:
               chrX:38442560-38443002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 314
               

               Conread position:
               129-576
               

               Cow position:
               chrX:45430422-45429970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 317
               

               Conread position:
               130-303
               

               Cow position:
               chrX:17010703-17010529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               130-319
               

               Cow position:
               chrX:39757632-39757822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               130-457
               

               Cow position:
               chrX:40106091-40105760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 240
               

               Conread position:
               130-505
               

               Cow position:
               chrX:361854-361474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               123, 313
               

               Conread position:
               130-505
               

               Cow position:
               chrX:18024639-18025018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               123, 73
               

               Conread position:
               130-505
               

               Cow position:
               chrX:34564899-34565255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 147
               

               Conread position:
               130-564
               

               Cow position:
               chrX:28555836-28555390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               292
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               123, 313
               

               Conread position:
               131-409
               

               Cow position:
               chrX:23135177-23135452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               122, 59
               

               Conread position:
               131-441
               

               Cow position:
               chrX:9403702-9404033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               131-458
               

               Cow position:
               chrX:6012507-6012173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               12, 63
               

               Conread position:
               131-506
               

               Cow position:
               chrX:42733466-42733837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               250
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               122, 60
               

               Conread position:
               131-507
               

               Cow position:
               chrX:29942749-29943132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               257
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               58, 331
               

               Conread position:
               131-535
               

               Cow position:
               chrX:16289961-16289552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 20
               

               Conread position:
               131-551
               

               Cow position:
               chrX:12290337-12290745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 171
               

               Conread position:
               132-505
               

               Cow position:
               chrX:23024304-23024680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 170
               

               Conread position:
               133-278
               

               Cow position:
               chrX:44568594-44568741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               44, 145
               

               Conread position:
               133-280
               

               Cow position:
               chrX:44839784-44839932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-283
               

               Cow position:
               chrX:22624054-22624209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               133-287
               

               Cow position:
               chrX:36975446-36975601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-288
               

               Cow position:
               chrX:16324651-16324489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               133-288
               

               Cow position:
               chrX:33589736-33589897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               133-288
               

               Cow position:
               chrX:40035867-40035713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               119, 26
               

               Conread position:
               133-289
               

               Cow position:
               chrX:42381825-42381669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               119, 16
               

               Conread position:
               133-290
               

               Cow position:
               chrX:39558765-39558607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               133-291
               

               Cow position:
               chrX:20675701-20675861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               133-292
               

               Cow position:
               chrX:25816653-25816496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               119, 144
               

               Conread position:
               133-298
               

               Cow position:
               chrX:7425026-7425198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               133-298
               

               Cow position:
               chrX:12980745-12980579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-298
               

               Cow position:
               chrX:17663316-17663144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               133-298
               

               Cow position:
               chrX:33538529-33538696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-298
               

               Cow position:
               chrX:35847817-35847981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               119, 156
               

               Conread position:
               133-300
               

               Cow position:
               chrX:20167755-20167924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               133-300
               

               Cow position:
               chrX:33519181-33519349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               133-300
               

               Cow position:
               chrX:34543366-34543533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               121, 8
               

               Conread position:
               133-300
               

               Cow position:
               chrX:41884835-41884666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-300
               

               Cow position:
               chrX:47243701-47243533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 67
               

               Conread position:
               133-301
               

               Cow position:
               chrX:6203106-6203280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               133-302
               

               Cow position:
               chrX:6695748-6695573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               33, 116
               

               Conread position:
               133-313
               

               Cow position:
               chrX:4750771-4750596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               149
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               119, 101
               

               Conread position:
               133-313
               

               Cow position:
               chrX:13266228-13266041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               133-313
               

               Cow position:
               chrX:13404750-13404562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               133-314
               

               Cow position:
               chrX:17933729-17933916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 128
               

               Conread position:
               133-315
               

               Cow position:
               chrX:23038395-23038212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-323
               

               Cow position:
               chrX:20538879-20539063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               133-328
               

               Cow position:
               chrX:42530305-42530113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               120, 145
               

               Conread position:
               133-329
               

               Cow position:
               chrX:19399380-19399578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-330
               

               Cow position:
               chrX:12008080-12007882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-330
               

               Cow position:
               chrX:30134886-30134687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               120, 192
               

               Conread position:
               133-331
               

               Cow position:
               chrX:17892145-17892345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               133-331
               

               Cow position:
               chrX:39383482-39383277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               133-335
               

               Cow position:
               chrX:38852761-38852962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 144
               

               Conread position:
               133-338
               

               Cow position:
               chrX:10256540-10256335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 37
               

               Conread position:
               133-344
               

               Cow position:
               chrX:22284110-22284332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               133-350
               

               Cow position:
               chrX:14030620-14030838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-353
               

               Cow position:
               chrX:6406947-6407163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               114, 145
               

               Conread position:
               133-355
               

               Cow position:
               chrX:10440240-10440013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 61
               

               Conread position:
               133-355
               

               Cow position:
               chrX:38067111-38066887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               133-355
               

               Cow position:
               chrX:42221966-42221746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 196
               

               Conread position:
               133-367
               

               Cow position:
               chrX:24788114-24787883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               119, 176
               

               Conread position:
               133-367
               

               Cow position:
               chrX:36794596-36794832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-381
               

               Cow position:
               chrX:525277-525528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               133-381
               

               Cow position:
               chrX:19447751-19447493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               133-384
               

               Cow position:
               chrX:17887968-17888213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               25, 106
               

               Conread position:
               133-391
               

               Cow position:
               chrX:6654715-6654440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               33, 128
               

               Conread position:
               133-400
               

               Cow position:
               chrX:26617319-26617050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-402
               

               Cow position:
               chrX:9898740-9898468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-402
               

               Cow position:
               chrX:19595867-19596146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               31, 111
               

               Conread position:
               133-402
               

               Cow position:
               chrX:22115679-22115409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 26
               

               Conread position:
               133-402
               

               Cow position:
               chrX:30139182-30138911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-405
               

               Cow position:
               chrX:15718075-15717804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               133-408
               

               Cow position:
               chrX:21862068-21861791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 91
               

               Conread position:
               133-418
               

               Cow position:
               chrX:22600814-22600529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               120, 272
               

               Conread position:
               133-419
               

               Cow position:
               chrX:24102581-24102868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 273
               

               Conread position:
               133-421
               

               Cow position:
               chrX:15620930-15620640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-424
               

               Cow position:
               chrX:13923043-13923317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               121, 43
               

               Conread position:
               133-431
               

               Cow position:
               chrX:626442-626141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               120, 151
               

               Conread position:
               133-436
               

               Cow position:
               chrX:32871184-32870876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 222
               

               Conread position:
               133-437
               

               Cow position:
               chrX:3130167-3130490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               119, 21
               

               Conread position:
               133-437
               

               Cow position:
               chrX:44930242-44930547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               120, 57
               

               Conread position:
               133-438
               

               Cow position:
               chrX:10415923-10415618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 86
               

               Conread position:
               133-438
               

               Cow position:
               chrX:14134783-14135094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               120, 145
               

               Conread position:
               133-438
               

               Cow position:
               chrX:22811488-22811798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-438
               

               Cow position:
               chrX:23316818-23316508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               120, 145
               

               Conread position:
               133-438
               

               Cow position:
               chrX:36535133-36534822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               133-438
               

               Cow position:
               chrX:48423537-48423834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               120, 200
               

               Conread position:
               133-439
               

               Cow position:
               chrX:17964914-17964609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               133-439
               

               Cow position:
               chrX:25924940-25924623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               133-439
               

               Cow position:
               chrX:41192291-41192596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 177
               

               Conread position:
               133-439
               

               Cow position:
               chrX:41377213-41377522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               133-440
               

               Cow position:
               chrX:3207965-3207652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               133-442
               

               Cow position:
               chrX:8661357-8661675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 204
               

               Conread position:
               133-442
               

               Cow position:
               chrX:22329974-22329657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 310
               

               Conread position:
               133-442
               

               Cow position:
               chrX:41846932-41846621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 279
               

               Conread position:
               133-443
               

               Cow position:
               chrX:24193717-24194022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               122, 56
               

               Conread position:
               133-443
               

               Cow position:
               chrX:27486006-27486324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               48, 152
               

               Conread position:
               133-443
               

               Cow position:
               chrX:44907918-44908233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               169, 120
               

               Conread position:
               133-444
               

               Cow position:
               chrX:48224586-48224270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               133-445
               

               Cow position:
               chrX:9299245-9298919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               43, 287
               

               Conread position:
               133-445
               

               Cow position:
               chrX:24169718-24169394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               32, 77
               

               Conread position:
               133-445
               

               Cow position:
               chrX:32144561-32144249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 264
               

               Conread position:
               133-446
               

               Cow position:
               chrX:126387-126708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 280
               

               Conread position:
               133-448
               

               Cow position:
               chrX:24826935-24827252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               33, 165
               

               Conread position:
               133-450
               

               Cow position:
               chrX:5246850-5247184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 288
               

               Conread position:
               133-450
               

               Cow position:
               chrX:17980197-17980519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-452
               

               Cow position:
               chrX:24467523-24467200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               120, 309
               

               Conread position:
               133-454
               

               Cow position:
               chrX:39698930-39699251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               120, 57
               

               Conread position:
               133-459
               

               Cow position:
               chrX:20504363-20504684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               33, 114
               

               Conread position:
               133-459
               

               Cow position:
               chrX:38668038-38667687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               33, 318
               

               Conread position:
               133-460
               

               Cow position:
               chrX:29760301-29760633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-462
               

               Cow position:
               chrX:29864829-29864493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               120, 314
               

               Conread position:
               133-468
               

               Cow position:
               chrX:38151290-38151631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 313
               

               Conread position:
               133-468
               

               Cow position:
               chrX:44086906-44087247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               120, 230
               

               Conread position:
               133-469
               

               Cow position:
               chrX:24809368-24809031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               120, 227
               

               Conread position:
               133-470
               

               Cow position:
               chrX:34238322-34238661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               133-481
               

               Cow position:
               chrX:2932118-2931764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               120, 311
               

               Conread position:
               133-481
               

               Cow position:
               chrX:28518121-28517770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               120, 106
               

               Conread position:
               133-481
               

               Cow position:
               chrX:35268495-35268832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 70
               

               Conread position:
               133-481
               

               Cow position:
               chrX:45043160-45043511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 229
               

               Conread position:
               133-489
               

               Cow position:
               chrX:7805978-7806338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 134
               

               Conread position:
               133-489
               

               Cow position:
               chrX:39556214-39555871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 145
               

               Conread position:
               133-498
               

               Cow position:
               chrX:15486023-15485657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 145
               

               Conread position:
               133-498
               

               Cow position:
               chrX:28111096-28111474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 60
               

               Conread position:
               133-498
               

               Cow position:
               chrX:39546377-39546009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 207
               

               Conread position:
               133-498
               

               Cow position:
               chrX:48287829-48287482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 43
               

               Conread position:
               133-500
               

               Cow position:
               chrX:17743672-17744035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               133-501
               

               Cow position:
               chrX:11461269-11460896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               133-501
               

               Cow position:
               chrX:27590431-27590064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               120, 146
               

               Conread position:
               133-502
               

               Cow position:
               chrX:31261035-31260656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 320
               

               Conread position:
               133-502
               

               Cow position:
               chrX:45674446-45674819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               62, 112
               

               Conread position:
               133-503
               

               Cow position:
               chrX:2146914-2147317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               133-503
               

               Cow position:
               chrX:27318818-27319194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               120, 58
               

               Conread position:
               133-503
               

               Cow position:
               chrX:41103390-41103763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 229
               

               Conread position:
               133-504
               

               Cow position:
               chrX:2479025-2478650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 172
               

               Conread position:
               133-504
               

               Cow position:
               chrX:6869961-6869584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               120, 306
               

               Conread position:
               133-504
               

               Cow position:
               chrX:11975885-11975517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               120, 204
               

               Conread position:
               133-504
               

               Cow position:
               chrX:15329255-15329619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 279
               

               Conread position:
               133-504
               

               Cow position:
               chrX:25966651-25967008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               259
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               25, 162
               

               Conread position:
               133-504
               

               Cow position:
               chrX:33803419-33803033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 116
               

               Conread position:
               133-504
               

               Cow position:
               chrX:33827435-33827044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               273
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               133-504
               

               Cow position:
               chrX:35388305-35387929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 314
               

               Conread position:
               133-504
               

               Cow position:
               chrX:37816190-37816566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-505
               

               Cow position:
               chrX:2151330-2150957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               120, 306
               

               Conread position:
               133-505
               

               Cow position:
               chrX:2160367-2160744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 314
               

               Conread position:
               133-505
               

               Cow position:
               chrX:2559358-2558985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               253
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               120, 147
               

               Conread position:
               133-505
               

               Cow position:
               chrX:2945267-2944889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               72, 313
               

               Conread position:
               133-505
               

               Cow position:
               chrX:4905387-4905012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 273
               

               Conread position:
               133-505
               

               Cow position:
               chrX:5306201-5306578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               248
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-505
               

               Cow position:
               chrX:7444686-7445062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 309
               

               Conread position:
               133-505
               

               Cow position:
               chrX:8434601-8434228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               250
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               120, 31
               

               Conread position:
               133-505
               

               Cow position:
               chrX:8796853-8797227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 112
               

               Conread position:
               133-505
               

               Cow position:
               chrX:10528172-10527796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               249
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               120, 309
               

               Conread position:
               133-505
               

               Cow position:
               chrX:10932274-10932651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 145
               

               Conread position:
               133-505
               

               Cow position:
               chrX:11145736-11145359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               120, 199
               

               Conread position:
               133-505
               

               Cow position:
               chrX:12115643-12116020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 168
               

               Conread position:
               133-505
               

               Cow position:
               chrX:12347479-12347853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               16, 311
               

               Conread position:
               133-505
               

               Cow position:
               chrX:13091559-13091183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               120, 105
               

               Conread position:
               133-505
               

               Cow position:
               chrX:13868299-13868677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 145
               

               Conread position:
               133-505
               

               Cow position:
               chrX:13971625-13971248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-505
               

               Cow position:
               chrX:14462914-14463292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               35, 311
               

               Conread position:
               133-505
               

               Cow position:
               chrX:14599138-14599507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 91
               

               Conread position:
               133-505
               

               Cow position:
               chrX:15007549-15007175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 311
               

               Conread position:
               133-505
               

               Cow position:
               chrX:15120286-15119910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 45
               

               Conread position:
               133-505
               

               Cow position:
               chrX:15260017-15259640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-505
               

               Cow position:
               chrX:15531550-15531176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 55
               

               Conread position:
               133-505
               

               Cow position:
               chrX:16359407-16359036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               120, 161
               

               Conread position:
               133-505
               

               Cow position:
               chrX:16790215-16789878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               270
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               93, 42
               

               Conread position:
               133-505
               

               Cow position:
               chrX:17888786-17888445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               194, 64
               

               Conread position:
               133-505
               

               Cow position:
               chrX:18118869-18118493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 58
               

               Conread position:
               133-505
               

               Cow position:
               chrX:18656203-18655826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-505
               

               Cow position:
               chrX:20321165-20320789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               120, 145
               

               Conread position:
               133-505
               

               Cow position:
               chrX:21686222-21686593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               120, 162
               

               Conread position:
               133-505
               

               Cow position:
               chrX:21833487-21833864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 312
               

               Conread position:
               133-505
               

               Cow position:
               chrX:22772257-22772634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               120, 314
               

               Conread position:
               133-505
               

               Cow position:
               chrX:23986850-23987223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               120, 57
               

               Conread position:
               133-505
               

               Cow position:
               chrX:25575561-25575938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               79, 173
               

               Conread position:
               133-505
               

               Cow position:
               chrX:26626087-26625702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 328
               

               Conread position:
               133-505
               

               Cow position:
               chrX:26759966-26759590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 60
               

               Conread position:
               133-505
               

               Cow position:
               chrX:27422679-27422303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 242
               

               Conread position:
               133-505
               

               Cow position:
               chrX:27446293-27446670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 145
               

               Conread position:
               133-505
               

               Cow position:
               chrX:27977227-27976852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 279
               

               Conread position:
               133-505
               

               Cow position:
               chrX:28024865-28025240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               120, 245
               

               Conread position:
               133-505
               

               Cow position:
               chrX:28097733-28098086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               133-505
               

               Cow position:
               chrX:29777644-29778022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               120, 152
               

               Conread position:
               133-505
               

               Cow position:
               chrX:29903344-29903722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               252
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               120, 311
               

               Conread position:
               133-505
               

               Cow position:
               chrX:30531428-30531049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               31, 36
               

               Conread position:
               133-505
               

               Cow position:
               chrX:30940783-30941160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               250
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-505
               

               Cow position:
               chrX:31978241-31977867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               120, 58
               

               Conread position:
               133-505
               

               Cow position:
               chrX:34441845-34441477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               133-505
               

               Cow position:
               chrX:35288256-35288629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 142
               

               Conread position:
               133-505
               

               Cow position:
               chrX:38227488-38227119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 258
               

               Conread position:
               133-505
               

               Cow position:
               chrX:39714153-39714528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               120, 14
               

               Conread position:
               133-505
               

               Cow position:
               chrX:40545008-40544629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 314
               

               Conread position:
               133-505
               

               Cow position:
               chrX:41156913-41157290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-505
               

               Cow position:
               chrX:42591327-42591704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               252
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-505
               

               Cow position:
               chrX:44737389-44737011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 335
               

               Conread position:
               133-505
               

               Cow position:
               chrX:45903780-45904157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-505
               

               Cow position:
               chrX:46532918-46532527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               133-505
               

               Cow position:
               chrX:46579253-46578876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-505
               

               Cow position:
               chrX:47379865-47379494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 250
               

               Conread position:
               133-506
               

               Cow position:
               chrX:11819961-11820328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 92
               

               Conread position:
               133-506
               

               Cow position:
               chrX:12249403-12249777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 247
               

               Conread position:
               133-506
               

               Cow position:
               chrX:16706401-16706782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 315
               

               Conread position:
               133-506
               

               Cow position:
               chrX:18244589-18244965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 178
               

               Conread position:
               133-506
               

               Cow position:
               chrX:24317668-24318040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 176
               

               Conread position:
               133-506
               

               Cow position:
               chrX:25452152-25452522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 106
               

               Conread position:
               133-506
               

               Cow position:
               chrX:27498369-27498748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 36
               

               Conread position:
               133-506
               

               Cow position:
               chrX:39174611-39174241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 307
               

               Conread position:
               133-518
               

               Cow position:
               chrX:21415690-21416088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 36
               

               Conread position:
               133-520
               

               Cow position:
               chrX:24482768-24482378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               120, 58
               

               Conread position:
               133-526
               

               Cow position:
               chrX:22538352-22537948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 285
               

               Conread position:
               133-529
               

               Cow position:
               chrX:1550552-1550952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-530
               

               Cow position:
               chrX:5375971-5376377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 331
               

               Conread position:
               133-530
               

               Cow position:
               chrX:7551193-7550789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 311
               

               Conread position:
               133-530
               

               Cow position:
               chrX:11949891-11949494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 308
               

               Conread position:
               133-530
               

               Cow position:
               chrX:18078308-18077903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-530
               

               Cow position:
               chrX:18898049-18897648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 219
               

               Conread position:
               133-530
               

               Cow position:
               chrX:23280609-23281010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 58
               

               Conread position:
               133-530
               

               Cow position:
               chrX:23386937-23386541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               273
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               120, 204
               

               Conread position:
               133-530
               

               Cow position:
               chrX:23396208-23396605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               273
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               120, 204
               

               Conread position:
               133-530
               

               Cow position:
               chrX:24587852-24587447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-530
               

               Cow position:
               chrX:30143682-30143278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 138
               

               Conread position:
               133-530
               

               Cow position:
               chrX:30228508-30228106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 104
               

               Conread position:
               133-530
               

               Cow position:
               chrX:32094848-32094443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-530
               

               Cow position:
               chrX:35240466-35240868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-530
               

               Cow position:
               chrX:37133932-37133527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 312
               

               Conread position:
               133-530
               

               Cow position:
               chrX:45786732-45787133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 206
               

               Conread position:
               133-532
               

               Cow position:
               chrX:29066054-29066445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               120, 100
               

               Conread position:
               133-533
               

               Cow position:
               chrX:29841567-29841159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               270
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               46, 31
               

               Conread position:
               133-535
               

               Cow position:
               chrX:5353701-5353292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 330
               

               Conread position:
               133-535
               

               Cow position:
               chrX:12466097-12466499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 244
               

               Conread position:
               133-535
               

               Cow position:
               chrX:22493609-22494019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 329
               

               Conread position:
               133-539
               

               Cow position:
               chrX:21749856-21749453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               282
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               120, 104
               

               Conread position:
               133-541
               

               Cow position:
               chrX:24280537-24280961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 318
               

               Conread position:
               133-542
               

               Cow position:
               chrX:1947119-1946695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 317
               

               Conread position:
               133-542
               

               Cow position:
               chrX:7755503-7755922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               276
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-542
               

               Cow position:
               chrX:17995061-17995480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-542
               

               Cow position:
               chrX:27095721-27096124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 238
               

               Conread position:
               133-542
               

               Cow position:
               chrX:27626957-27627374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-542
               

               Cow position:
               chrX:27997252-27997667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               120, 196
               

               Conread position:
               133-542
               

               Cow position:
               chrX:28752738-28752318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               120, 243
               

               Conread position:
               133-542
               

               Cow position:
               chrX:42120905-42121324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-545
               

               Cow position:
               chrX:3405754-3405345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 191
               

               Conread position:
               133-546
               

               Cow position:
               chrX:31489114-31489541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 208
               

               Conread position:
               133-547
               

               Cow position:
               chrX:3372251-3371833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               120, 90
               

               Conread position:
               133-547
               

               Cow position:
               chrX:5280251-5279828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               120, 247
               

               Conread position:
               133-547
               

               Cow position:
               chrX:47211250-47210821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 316
               

               Conread position:
               133-548
               

               Cow position:
               chrX:21063899-21064306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 58
               

               Conread position:
               133-548
               

               Cow position:
               chrX:28632875-28632462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 75
               

               Conread position:
               133-550
               

               Cow position:
               chrX:45373681-45373265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               287
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               121, 70
               

               Conread position:
               133-551
               

               Cow position:
               chrX:12309784-12309360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 25
               

               Conread position:
               133-551
               

               Cow position:
               chrX:27516136-27516556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 58
               

               Conread position:
               133-551
               

               Cow position:
               chrX:31729060-31729468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 195
               

               Conread position:
               133-551
               

               Cow position:
               chrX:36250260-36249835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 308
               

               Conread position:
               133-552
               

               Cow position:
               chrX:32128392-32127965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 264
               

               Conread position:
               133-552
               

               Cow position:
               chrX:35680946-35681369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 62
               

               Conread position:
               133-552
               

               Cow position:
               chrX:41879328-41878903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 194
               

               Conread position:
               133-554
               

               Cow position:
               chrX:48370697-48371120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 285
               

               Conread position:
               133-555
               

               Cow position:
               chrX:45113238-45113647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 144
               

               Conread position:
               133-558
               

               Cow position:
               chrX:23564195-23563759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 426
               

               Conread position:
               133-560
               

               Cow position:
               chrX:4044256-4043828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 280
               

               Conread position:
               133-562
               

               Cow position:
               chrX:917774-917330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 203
               

               Conread position:
               133-562
               

               Cow position:
               chrX:7571505-7571943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 266
               

               Conread position:
               133-562
               

               Cow position:
               chrX:9651444-9650986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 167
               

               Conread position:
               133-562
               

               Cow position:
               chrX:20801373-20801807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 159
               

               Conread position:
               133-566
               

               Cow position:
               chrX:9169012-9168570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               287
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               120, 309
               

               Conread position:
               133-568
               

               Cow position:
               chrX:10866265-10865830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 272
               

               Conread position:
               133-568
               

               Cow position:
               chrX:42470335-42469898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 260
               

               Conread position:
               133-570
               

               Cow position:
               chrX:6493334-6493774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 161
               

               Conread position:
               133-571
               

               Cow position:
               chrX:4633255-4632811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 140
               

               Conread position:
               133-571
               

               Cow position:
               chrX:8641390-8641838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 309
               

               Conread position:
               133-571
               

               Cow position:
               chrX:9252569-9252116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 26
               

               Conread position:
               133-571
               

               Cow position:
               chrX:11672383-11672832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               294
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chrX:12360490-12360940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               292
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               72, 311
               

               Conread position:
               133-571
               

               Cow position:
               chrX:13070999-13070551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               291
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               120, 105
               

               Conread position:
               133-571
               

               Cow position:
               chrX:13396650-13396202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chrX:14801216-14800767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chrX:18223015-18223451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               292
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               120, 145
               

               Conread position:
               133-571
               

               Cow position:
               chrX:18695324-18694880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 285
               

               Conread position:
               133-571
               

               Cow position:
               chrX:20340287-20339845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 42
               

               Conread position:
               133-571
               

               Cow position:
               chrX:21768406-21768854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               292
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chrX:22612988-22613436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chrX:24969214-24968765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               290
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chrX:27305529-27305977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               294
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               120, 71
               

               Conread position:
               133-571
               

               Cow position:
               chrX:28588572-28589030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               294
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               120, 316
               

               Conread position:
               133-571
               

               Cow position:
               chrX:28847280-28846848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 151
               

               Conread position:
               133-571
               

               Cow position:
               chrX:30981562-30981114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               120, 26
               

               Conread position:
               133-571
               

               Cow position:
               chrX:38230665-38230216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 310
               

               Conread position:
               133-571
               

               Cow position:
               chrX:38330984-38331417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               285
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               120, 264
               

               Conread position:
               133-572
               

               Cow position:
               chrX:3649206-3648774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 145
               

               Conread position:
               133-572
               

               Cow position:
               chrX:23121986-23122435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 127
               

               Conread position:
               133-572
               

               Cow position:
               chrX:30180324-30179895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 284
               

               Conread position:
               133-573
               

               Cow position:
               chrX:11674656-11675113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 65
               

               Conread position:
               133-574
               

               Cow position:
               chrX:1616455-1615991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 322
               

               Conread position:
               133-574
               

               Cow position:
               chrX:5017804-5017361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 165
               

               Conread position:
               133-574
               

               Cow position:
               chrX:13177858-13177426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               133-574
               

               Cow position:
               chrX:15147579-15147143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 56
               

               Conread position:
               133-574
               

               Cow position:
               chrX:22888260-22888711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 311
               

               Conread position:
               133-574
               

               Cow position:
               chrX:24288311-24287883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               303
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               133-574
               

               Cow position:
               chrX:26441178-26440733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 311
               

               Conread position:
               133-574
               

               Cow position:
               chrX:28513674-28514125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               120, 300
               

               Conread position:
               133-574
               

               Cow position:
               chrX:29289178-29289628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               133-574
               

               Cow position:
               chrX:44054406-44054852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 146
               

               Conread position:
               133-574
               

               Cow position:
               chrX:48243850-48243416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               56, 64
               

               Conread position:
               133-575
               

               Cow position:
               chrX:878768-878329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 147
               

               Conread position:
               133-575
               

               Cow position:
               chrX:8869783-8869351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 179
               

               Conread position:
               133-576
               

               Cow position:
               chrX:6543858-6544309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               133-576
               

               Cow position:
               chrX:8899627-8900079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 58
               

               Conread position:
               133-576
               

               Cow position:
               chrX:14884360-14883904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 87
               

               Conread position:
               133-576
               

               Cow position:
               chrX:34376556-34376994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 60
               

               Conread position:
               133-576
               

               Cow position:
               chrX:34532133-34532572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 185
               

               Conread position:
               133-576
               

               Cow position:
               chrX:37232013-37232459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 146
               

               Conread position:
               133-576
               

               Cow position:
               chrX:40269078-40269543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 321
               

               Conread position:
               134-294
               

               Cow position:
               chrX:38999499-38999661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               32, 116
               

               Conread position:
               134-296
               

               Cow position:
               chrX:32419792-32419952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 36
               

               Conread position:
               134-331
               

               Cow position:
               chrX:27749406-27749208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               134-346
               

               Cow position:
               chrX:22449517-22449736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               134-392
               

               Cow position:
               chrX:29723054-29723311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 238
               

               Conread position:
               134-405
               

               Cow position:
               chrX:2486027-2485754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               119, 14
               

               Conread position:
               134-414
               

               Cow position:
               chrX:12096643-12096367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 70
               

               Conread position:
               134-418
               

               Cow position:
               chrX:21343997-21344287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               134-436
               

               Cow position:
               chrX:42540202-42540502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 172
               

               Conread position:
               134-437
               

               Cow position:
               chrX:26878264-26878577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 208
               

               Conread position:
               134-438
               

               Cow position:
               chrX:24735546-24735851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               119, 90
               

               Conread position:
               134-438
               

               Cow position:
               chrX:37403420-37403109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               134-443
               

               Cow position:
               chrX:27019808-27020108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               134-443
               

               Cow position:
               chrX:46448231-46447914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               32, 142
               

               Conread position:
               134-451
               

               Cow position:
               chrX:22568414-22568093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               119, 94
               

               Conread position:
               134-477
               

               Cow position:
               chrX:37852742-37853082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               187, 118
               

               Conread position:
               134-481
               

               Cow position:
               chrX:21227077-21227425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 84
               

               Conread position:
               134-498
               

               Cow position:
               chrX:16853786-16853413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 315
               

               Conread position:
               134-501
               

               Cow position:
               chrX:6652469-6652097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-502
               

               Cow position:
               chrX:16078271-16078635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               134-504
               

               Cow position:
               chrX:11566517-11566893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-504
               

               Cow position:
               chrX:45237069-45237444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-505
               

               Cow position:
               chrX:5320117-5319737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               55, 330
               

               Conread position:
               134-505
               

               Cow position:
               chrX:14598449-14598824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               253
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               119, 30
               

               Conread position:
               134-505
               

               Cow position:
               chrX:14974132-14973766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 145
               

               Conread position:
               134-505
               

               Cow position:
               chrX:15114274-15114650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               134-505
               

               Cow position:
               chrX:15439046-15438674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               256
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               119, 144
               

               Conread position:
               134-505
               

               Cow position:
               chrX:16279252-16279628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-505
               

               Cow position:
               chrX:16465903-16466280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               119, 310
               

               Conread position:
               134-505
               

               Cow position:
               chrX:22077930-22078306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-505
               

               Cow position:
               chrX:24769257-24768885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               253
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               134-505
               

               Cow position:
               chrX:26974513-26974889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-505
               

               Cow position:
               chrX:34554338-34554700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 115
               

               Conread position:
               134-505
               

               Cow position:
               chrX:37764594-37764218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-505
               

               Cow position:
               chrX:38051829-38051455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               119, 247
               

               Conread position:
               134-505
               

               Cow position:
               chrX:39560049-39559673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               252
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               119, 308
               

               Conread position:
               134-505
               

               Cow position:
               chrX:46297263-46297639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-535
               

               Cow position:
               chrX:8591143-8591555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               134-547
               

               Cow position:
               chrX:7486467-7486890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               119, 144
               

               Conread position:
               134-547
               

               Cow position:
               chrX:9085730-9085308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               276
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-551
               

               Cow position:
               chrX:38072164-38071740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 140
               

               Conread position:
               134-552
               

               Cow position:
               chrX:23583161-23583588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 311
               

               Conread position:
               134-562
               

               Cow position:
               chrX:37772831-37772391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               119, 310
               

               Conread position:
               134-571
               

               Cow position:
               chrX:1576660-1576212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-571
               

               Cow position:
               chrX:8530143-8530591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               294
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               120, 309
               

               Conread position:
               134-571
               

               Cow position:
               chrX:14409784-14409338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               287
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-571
               

               Cow position:
               chrX:18462372-18461925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 313
               

               Conread position:
               134-571
               

               Cow position:
               chrX:34519329-34519776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               292
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-571
               

               Cow position:
               chrX:40591289-40591727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               289
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               119, 270
               

               Conread position:
               134-574
               

               Cow position:
               chrX:161031-161462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 208
               

               Conread position:
               134-574
               

               Cow position:
               chrX:25289076-25288625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               134-575
               

               Cow position:
               chrX:671406-670954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 309
               

               Conread position:
               135-289
               

               Cow position:
               chrX:39939150-39938991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               31, 123
               

               Conread position:
               135-300
               

               Cow position:
               chrX:4943403-4943232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               135-361
               

               Cow position:
               chrX:47654908-47655132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               115, 194
               

               Conread position:
               135-442
               

               Cow position:
               chrX:34009348-34009663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               31, 210
               

               Conread position:
               135-445
               

               Cow position:
               chrX:40581590-40581907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               47, 137
               

               Conread position:
               135-446
               

               Cow position:
               chrX:19228476-19228146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               31, 258
               

               Conread position:
               135-454
               

               Cow position:
               chrX:18293537-18293857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               39, 122
               

               Conread position:
               135-455
               

               Cow position:
               chrX:21795099-21795420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               135-458
               

               Cow position:
               chrX:6906218-6905887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               31, 26
               

               Conread position:
               135-471
               

               Cow position:
               chrX:10438047-10437719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 149
               

               Conread position:
               135-501
               

               Cow position:
               chrX:19023031-19023414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               119, 105
               

               Conread position:
               135-504
               

               Cow position:
               chrX:42587825-42587455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               119, 236
               

               Conread position:
               135-548
               

               Cow position:
               chrX:24105231-24105647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 69
               

               Conread position:
               135-552
               

               Cow position:
               chrX:29876452-29876046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               288
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               31, 119
               

               Conread position:
               135-558
               

               Cow position:
               chrX:17794599-17795007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 148
               

               Conread position:
               135-574
               

               Cow position:
               chrX:15139945-15139497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               135-576
               

               Cow position:
               chrX:24424788-24424349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 124
               

               Conread position:
               136-288
               

               Cow position:
               chrX:41083508-41083663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               136-458
               

               Cow position:
               chrX:24886883-24886576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               118, 34
               

               Conread position:
               137-308
               

               Cow position:
               chrX:12671881-12671709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               137-326
               

               Cow position:
               chrX:40224637-40224447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               137-330
               

               Cow position:
               chrX:28542276-28542081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               137-345
               

               Cow position:
               chrX:43199038-43199251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               137-398
               

               Cow position:
               chrX:24320666-24320407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               116, 131
               

               Conread position:
               137-407
               

               Cow position:
               chrX:21495364-21495635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               15, 23
               

               Conread position:
               137-436
               

               Cow position:
               chrX:40602570-40602867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               116, 194
               

               Conread position:
               137-463
               

               Cow position:
               chrX:5112950-5112619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-464
               

               Cow position:
               chrX:24125456-24125134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               116, 74
               

               Conread position:
               137-465
               

               Cow position:
               chrX:28646377-28646048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 59
               

               Conread position:
               137-472
               

               Cow position:
               chrX:11083008-11082673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 305
               

               Conread position:
               137-481
               

               Cow position:
               chrX:15561209-15560859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               116, 213
               

               Conread position:
               137-495
               

               Cow position:
               chrX:4123442-4123802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 45
               

               Conread position:
               137-504
               

               Cow position:
               chrX:48247231-48246877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               36, 120
               

               Conread position:
               137-505
               

               Cow position:
               chrX:3464470-3464099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               116, 304
               

               Conread position:
               137-505
               

               Cow position:
               chrX:3653371-3653733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 86
               

               Conread position:
               137-505
               

               Cow position:
               chrX:8782350-8782723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-505
               

               Cow position:
               chrX:10428146-10428518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 133
               

               Conread position:
               137-505
               

               Cow position:
               chrX:10915644-10916025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               137-505
               

               Cow position:
               chrX:14134081-14134454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               247
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               117, 306
               

               Conread position:
               137-505
               

               Cow position:
               chrX:17055175-17055548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-505
               

               Cow position:
               chrX:17783105-17783478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               252
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               116, 141
               

               Conread position:
               137-505
               

               Cow position:
               chrX:26531565-26531937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 7
               

               Conread position:
               137-505
               

               Cow position:
               chrX:27705200-27705561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 13
               

               Conread position:
               137-505
               

               Cow position:
               chrX:32584205-32583834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 39
               

               Conread position:
               137-505
               

               Cow position:
               chrX:35533457-35533830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-505
               

               Cow position:
               chrX:45658474-45658106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 40
               

               Conread position:
               137-506
               

               Cow position:
               chrX:22821020-22821394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 308
               

               Conread position:
               137-506
               

               Cow position:
               chrX:27105864-27106238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 308
               

               Conread position:
               137-506
               

               Cow position:
               chrX:29780351-29780721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 244
               

               Conread position:
               137-520
               

               Cow position:
               chrX:30163632-30163245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               116, 229
               

               Conread position:
               137-530
               

               Cow position:
               chrX:30455016-30454615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 308
               

               Conread position:
               137-530
               

               Cow position:
               chrX:31202446-31202847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 200
               

               Conread position:
               137-534
               

               Cow position:
               chrX:24441640-24441241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 54
               

               Conread position:
               137-535
               

               Cow position:
               chrX:21785374-21785772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 122
               

               Conread position:
               137-540
               

               Cow position:
               chrX:13686323-13686735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               116, 166
               

               Conread position:
               137-542
               

               Cow position:
               chrX:2274523-2274938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               273
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-542
               

               Cow position:
               chrX:6655660-6655247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 67
               

               Conread position:
               137-563
               

               Cow position:
               chrX:20742592-20743029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               286
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-571
               

               Cow position:
               chrX:5123753-5123310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 53
               

               Conread position:
               137-571
               

               Cow position:
               chrX:20617191-20616746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               290
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-571
               

               Cow position:
               chrX:27759313-27759758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-571
               

               Cow position:
               chrX:38014700-38015145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               290
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               137-574
               

               Cow position:
               chrX:4996218-4996635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 115
               

               Conread position:
               137-574
               

               Cow position:
               chrX:6372787-6373226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               287
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               116, 309
               

               Conread position:
               137-574
               

               Cow position:
               chrX:40827139-40826701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 26
               

               Conread position:
               137-576
               

               Cow position:
               chrX:26275745-26276194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 306
               

               Conread position:
               138-300
               

               Cow position:
               chrX:13058165-13058334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               138-330
               

               Cow position:
               chrX:7572986-7573180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               138-332
               

               Cow position:
               chrX:38827034-38826836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               58, 32
               

               Conread position:
               138-480
               

               Cow position:
               chrX:32978650-32978308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 236
               

               Conread position:
               138-505
               

               Cow position:
               chrX:23572193-23571821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 307
               

               Conread position:
               138-505
               

               Cow position:
               chrX:25741507-25741135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               247
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               115, 309
               

               Conread position:
               138-536
               

               Cow position:
               chrX:25459030-25458623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 307
               

               Conread position:
               138-562
               

               Cow position:
               chrX:32309701-32310143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               309
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               27, 318
               

               Conread position:
               138-571
               

               Cow position:
               chrX:44557686-44558130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               296
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               41, 26
               

               Conread position:
               139-308
               

               Cow position:
               chrX:37572772-37572942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               142
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               139-345
               

               Cow position:
               chrX:27117575-27117779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               115, 120
               

               Conread position:
               139-393
               

               Cow position:
               chrX:22325680-22325940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 76
               

               Conread position:
               139-505
               

               Cow position:
               chrX:2104013-2104380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 300
               

               Conread position:
               139-505
               

               Cow position:
               chrX:28559226-28558856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               114, 26
               

               Conread position:
               139-529
               

               Cow position:
               chrX:29849023-29848631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 304
               

               Conread position:
               139-530
               

               Cow position:
               chrX:30823124-30823523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 146
               

               Conread position:
               139-563
               

               Cow position:
               chrX:42508035-42507611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 20
               

               Conread position:
               139-576
               

               Cow position:
               chrX:7695372-7695803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 104
               

               Conread position:
               139-576
               

               Cow position:
               chrX:37072014-37072441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 240
               

               Conread position:
               140-560
               

               Cow position:
               chrX:34401607-34402036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 302
               

               Conread position:
               140-574
               

               Cow position:
               chrX:42247566-42247132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 51
               

               Conread position:
               141-376
               

               Cow position:
               chrX:42499464-42499216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 169
               

               Conread position:
               141-443
               

               Cow position:
               chrX:40142590-40142283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               25, 143
               

               Conread position:
               141-506
               

               Cow position:
               chrX:25946232-25945857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 144
               

               Conread position:
               141-518
               

               Cow position:
               chrX:38218328-38218697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 136
               

               Conread position:
               141-570
               

               Cow position:
               chrX:31949320-31948897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 89
               

               Conread position:
               143-498
               

               Cow position:
               chrX:32188747-32188391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 240
               

               Conread position:
               144-439
               

               Cow position:
               chrX:26845119-26845431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               144-498
               

               Cow position:
               chrX:39700826-39701190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 315
               

               Conread position:
               144-505
               

               Cow position:
               chrX:43979231-43979599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               109, 301
               

               Conread position:
               144-506
               

               Cow position:
               chrX:16713810-16714176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 301
               

               Conread position:
               144-568
               

               Cow position:
               chrX:41526905-41526478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 88
               

               Conread position:
               144-570
               

               Cow position:
               chrX:21062830-21063262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               288
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               111, 99
               

               Conread position:
               144-574
               

               Cow position:
               chrX:34095174-34095601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               109, 299
               

               Conread position:
               144-574
               

               Cow position:
               chrX:37489331-37489769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 265
               

               Conread position:
               145-564
               

               Cow position:
               chrX:23235444-23235875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               108, 298
               

               Conread position:
               146-504
               

               Cow position:
               chrX:25419549-25419184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 148
               

               Conread position:
               146-561
               

               Cow position:
               chrX:34192296-34192707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 119
               

               Conread position:
               147-354
               

               Cow position:
               chrX:8325876-8326083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               105, 165
               

               Conread position:
               147-471
               

               Cow position:
               chrX:7277546-7277856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 28
               

               Conread position:
               147-505
               

               Cow position:
               chrX:41790821-41790471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 68
               

               Conread position:
               147-518
               

               Cow position:
               chrX:15596661-15597027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 118
               

               Conread position:
               148-442
               

               Cow position:
               chrX:31373195-31373478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               148-506
               

               Cow position:
               chrX:19290389-19290738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 180
               

               Conread position:
               148-552
               

               Cow position:
               chrX:7718469-7718876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               149-466
               

               Cow position:
               chrX:44851709-44852034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               104, 79
               

               Conread position:
               152-391
               

               Cow position:
               chrX:17691882-17692122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               101, 52
               

               Conread position:
               152-498
               

               Cow position:
               chrX:11981743-11982104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               102, 17
               

               Conread position:
               152-505
               

               Cow position:
               chrX:41743534-41743886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 252
               

               Conread position:
               152-506
               

               Cow position:
               chrX:33855619-33855258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 296
               

               Conread position:
               153-336
               

               Cow position:
               chrX:34222371-34222555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               153-574
               

               Cow position:
               chrX:25035764-25035332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 123
               

               Conread position:
               154-552
               

               Cow position:
               chrX:41198709-41199133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               292
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               100, 261
               

               Conread position:
               156-396
               

               Cow position:
               chrX:39954912-39954671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               97, 35
               

               Conread position:
               156-435
               

               Cow position:
               chrX:33172332-33172051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               157-448
               

               Cow position:
               chrX:25205341-25205641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               97, 23
               

               Conread position:
               157-574
               

               Cow position:
               chrX:31250018-31250438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 75
               

               Conread position:
               158-300
               

               Cow position:
               chrX:41167401-41167261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               159-298
               

               Cow position:
               chrX:29602419-29602281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               93, 120
               

               Conread position:
               159-330
               

               Cow position:
               chrX:23341369-23341197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               159-497
               

               Cow position:
               chrX:45399870-45399525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               159-504
               

               Cow position:
               chrX:40648294-40648624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 118
               

               Conread position:
               159-506
               

               Cow position:
               chrX:30141697-30141338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               94, 294
               

               Conread position:
               159-530
               

               Cow position:
               chrX:9096295-9096672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 284
               

               Conread position:
               159-530
               

               Cow position:
               chrX:18950117-18949738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 286
               

               Conread position:
               159-547
               

               Cow position:
               chrX:28105554-28105940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 93
               

               Conread position:
               159-551
               

               Cow position:
               chrX:20697976-20697583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 120
               

               Conread position:
               161-447
               

               Cow position:
               chrX:47362256-47361965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               92, 284
               

               Conread position:
               161-505
               

               Cow position:
               chrX:11718148-11717814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 45
               

               Conread position:
               161-564
               

               Cow position:
               chrX:11844608-11844209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 117
               

               Conread position:
               161-574
               

               Cow position:
               chrX:5118853-5118452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 117
               

               Conread position:
               162-443
               

               Cow position:
               chrX:5127553-5127831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               164-393
               

               Cow position:
               chrX:27450397-27450157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               89, 116
               

               Conread position:
               165-297
               

               Cow position:
               chrX:27679995-27680128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               8, 113
               

               Conread position:
               165-298
               

               Cow position:
               chrX:1728934-1728799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               165-300
               

               Cow position:
               chrX:12724402-12724537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 121
               

               Conread position:
               165-301
               

               Cow position:
               chrX:29875360-29875224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               89, 112
               

               Conread position:
               165-443
               

               Cow position:
               chrX:20653026-20653312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               40, 258
               

               Conread position:
               165-443
               

               Cow position:
               chrX:40515539-40515808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               7, 38
               

               Conread position:
               165-450
               

               Cow position:
               chrX:2524096-2523806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 280
               

               Conread position:
               165-500
               

               Cow position:
               chrX:45200255-45199926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               57, 181
               

               Conread position:
               165-505
               

               Cow position:
               chrX:11561777-11562130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               89, 182
               

               Conread position:
               165-505
               

               Cow position:
               chrX:38936333-38936671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 282
               

               Conread position:
               165-533
               

               Cow position:
               chrX:45932638-45933016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               256
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               88, 278
               

               Conread position:
               165-574
               

               Cow position:
               chrX:40452579-40452168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 281
               

               Conread position:
               166-576
               

               Cow position:
               chrX:30338284-30337902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               283
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               68, 62
               

               Conread position:
               167-400
               

               Cow position:
               chrX:5640983-5640762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               87, 133
               

               Conread position:
               167-405
               

               Cow position:
               chrX:48490248-48490008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               87, 110
               

               Conread position:
               167-506
               

               Cow position:
               chrX:39071319-39071670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               86, 215
               

               Conread position:
               167-574
               

               Cow position:
               chrX:34502559-34502970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 111
               

               Conread position:
               168-504
               

               Cow position:
               chrX:44731237-44731571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 119
               

               Conread position:
               169-506
               

               Cow position:
               chrX:16722166-16721829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 21
               

               Conread position:
               169-530
               

               Cow position:
               chrX:11806378-11806013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 77
               

               Conread position:
               170-316
               

               Cow position:
               chrX:158189-158048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               83, 43
               

               Conread position:
               170-335
               

               Cow position:
               chrX:17631191-17631024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               170-363
               

               Cow position:
               chrX:11614360-11614555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               170-365
               

               Cow position:
               chrX:37760506-37760702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               19, 121
               

               Conread position:
               170-424
               

               Cow position:
               chrX:41304099-41303847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               82, 21
               

               Conread position:
               170-445
               

               Cow position:
               chrX:25283501-25283234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 85
               

               Conread position:
               170-454
               

               Cow position:
               chrX:5676058-5675778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 36
               

               Conread position:
               170-454
               

               Cow position:
               chrX:23696776-23696485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               170-498
               

               Cow position:
               chrX:7178551-7178865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 108
               

               Conread position:
               170-500
               

               Cow position:
               chrX:2300570-2300892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 226
               

               Conread position:
               170-500
               

               Cow position:
               chrX:2786907-2786589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 150
               

               Conread position:
               170-504
               

               Cow position:
               chrX:630654-630335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               84, 48
               

               Conread position:
               170-505
               

               Cow position:
               chrX:20038579-20038241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               83, 272
               

               Conread position:
               170-507
               

               Cow position:
               chrX:43408640-43408982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               84, 139
               

               Conread position:
               171-503
               

               Cow position:
               chrX:10301985-10302309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               142, 33
               

               Conread position:
               171-504
               

               Cow position:
               chrX:1978136-1978484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               253
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               83, 311
               

               Conread position:
               171-505
               

               Cow position:
               chrX:29048672-29048995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               20, 34
               

               Conread position:
               172-375
               

               Cow position:
               chrX:44983648-44983441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               175-298
               

               Cow position:
               chrX:22821656-22821781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               175-442
               

               Cow position:
               chrX:47743722-47743992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 28
               

               Conread position:
               176-300
               

               Cow position:
               chrX:40693115-40692990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               176-343
               

               Cow position:
               chrX:47177950-47177781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               78, 102
               

               Conread position:
               176-363
               

               Cow position:
               chrX:47965340-47965151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               176-445
               

               Cow position:
               chrX:43075626-43075913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 206
               

               Conread position:
               176-492
               

               Cow position:
               chrX:48227974-48227647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               176-500
               

               Cow position:
               chrX:28787016-28787324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               78, 35
               

               Conread position:
               176-504
               

               Cow position:
               chrX:17271643-17271313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               176-505
               

               Cow position:
               chrX:32747303-32747658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 292
               

               Conread position:
               176-506
               

               Cow position:
               chrX:34840122-34839805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               78, 70
               

               Conread position:
               176-536
               

               Cow position:
               chrX:25848560-25848922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               78, 151
               

               Conread position:
               177-331
               

               Cow position:
               chrX:11583497-11583344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               77, 16
               

               Conread position:
               177-334
               

               Cow position:
               chrX:40542445-40542604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               177-398
               

               Cow position:
               chrX:27982499-27982277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               76, 143
               

               Conread position:
               177-402
               

               Cow position:
               chrX:3808052-3808281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               177-446
               

               Cow position:
               chrX:22873043-22873319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               177-481
               

               Cow position:
               chrX:19689861-19690179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               177-484
               

               Cow position:
               chrX:7381970-7382287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               177-490
               

               Cow position:
               chrX:35937423-35937121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 101
               

               Conread position:
               177-500
               

               Cow position:
               chrX:10306316-10306643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 104
               

               Conread position:
               177-506
               

               Cow position:
               chrX:38102799-38102467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               177-535
               

               Cow position:
               chrX:37843366-37843725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 311
               

               Conread position:
               177-552
               

               Cow position:
               chrX:42585419-42585051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 51
               

               Conread position:
               177-554
               

               Cow position:
               chrX:13912725-13913099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 230
               

               Conread position:
               177-563
               

               Cow position:
               chrX:9227339-9226935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 151
               

               Conread position:
               178-308
               

               Cow position:
               chrX:1823709-1823840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               178-329
               

               Cow position:
               chrX:14009006-14008853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               178-330
               

               Cow position:
               chrX:40321274-40321430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               178-402
               

               Cow position:
               chrX:10718157-10718382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               178-437
               

               Cow position:
               chrX:39386618-39386354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               75, 111
               

               Conread position:
               178-445
               

               Cow position:
               chrX:6659022-6659295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 63
               

               Conread position:
               178-447
               

               Cow position:
               chrX:30863552-30863278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-450
               

               Cow position:
               chrX:6828782-6829057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               75, 227
               

               Conread position:
               178-450
               

               Cow position:
               chrX:39548977-39549254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-498
               

               Cow position:
               chrX:20945215-20945532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 190
               

               Conread position:
               178-505
               

               Cow position:
               chrX:15577994-15577662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-505
               

               Cow position:
               chrX:34333553-34333221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-505
               

               Cow position:
               chrX:35612897-35612566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               75, 119
               

               Conread position:
               178-505
               

               Cow position:
               chrX:44387637-44387964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               75, 99
               

               Conread position:
               178-505
               

               Cow position:
               chrX:44980390-44980058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               75, 264
               

               Conread position:
               178-535
               

               Cow position:
               chrX:22578513-22578157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               75, 55
               

               Conread position:
               178-535
               

               Cow position:
               chrX:36240042-36240405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-571
               

               Cow position:
               chrX:29508430-29508828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               75, 116
               

               Conread position:
               178-571
               

               Cow position:
               chrX:39731160-39731564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               75, 265
               

               Conread position:
               178-574
               

               Cow position:
               chrX:7509784-7510188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               75, 264
               

               Conread position:
               179-429
               

               Cow position:
               chrX:31777790-31777530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 109
               

               Conread position:
               179-442
               

               Cow position:
               chrX:13069089-13068824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               75, 15
               

               Conread position:
               179-444
               

               Cow position:
               chrX:37299240-37299515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               57, 148
               

               Conread position:
               179-448
               

               Cow position:
               chrX:48205265-48204990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               75, 267
               

               Conread position:
               179-504
               

               Cow position:
               chrX:25337824-25338158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               179-505
               

               Cow position:
               chrX:14846426-14846095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 264
               

               Conread position:
               179-505
               

               Cow position:
               chrX:45089085-45089423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 86
               

               Conread position:
               179-564
               

               Cow position:
               chrX:47967248-47967639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 116
               

               Conread position:
               180-300
               

               Cow position:
               chrX:1514777-1514656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               180-300
               

               Cow position:
               chrX:10394292-10394413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               180-386
               

               Cow position:
               chrX:18794350-18794146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               63, 99
               

               Conread position:
               180-396
               

               Cow position:
               chrX:11904678-11904458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               180-419
               

               Cow position:
               chrX:43006968-43006723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               180-425
               

               Cow position:
               chrX:4664968-4664717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               180-443
               

               Cow position:
               chrX:30919745-30919474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               180-506
               

               Cow position:
               chrX:20029896-20030232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               73, 270
               

               Conread position:
               181-395
               

               Cow position:
               chrX:27240386-27240604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 191
               

               Conread position:
               181-423
               

               Cow position:
               chrX:165541-165784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               69, 225
               

               Conread position:
               181-429
               

               Cow position:
               chrX:24006172-24005926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 103
               

               Conread position:
               181-429
               

               Cow position:
               chrX:27678003-27678253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               73, 86
               

               Conread position:
               181-435
               

               Cow position:
               chrX:7108569-7108828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 114
               

               Conread position:
               181-437
               

               Cow position:
               chrX:501928-501675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               181-438
               

               Cow position:
               chrX:9346795-9347053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               145, 74
               

               Conread position:
               181-445
               

               Cow position:
               chrX:29010383-29010650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               72, 157
               

               Conread position:
               181-568
               

               Cow position:
               chrX:40558026-40557635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 206
               

               Conread position:
               182-396
               

               Cow position:
               chrX:17969198-17968982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               182-498
               

               Cow position:
               chrX:32171231-32170920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 198
               

               Conread position:
               182-506
               

               Cow position:
               chrX:47343943-47344269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 247
               

               Conread position:
               182-530
               

               Cow position:
               chrX:24577914-24577560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               71, 261
               

               Conread position:
               182-552
               

               Cow position:
               chrX:6234783-6234423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 49
               

               Conread position:
               183-367
               

               Cow position:
               chrX:2079590-2079398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               183-396
               

               Cow position:
               chrX:17282337-17282123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               69, 204
               

               Conread position:
               183-432
               

               Cow position:
               chrX:12102397-12102142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               183-446
               

               Cow position:
               chrX:4630038-4629768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               183-557
               

               Cow position:
               chrX:44396672-44397048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               174, 70
               

               Conread position:
               183-576
               

               Cow position:
               chrX:31436132-31436526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 207
               

               Conread position:
               184-494
               

               Cow position:
               chrX:21255690-21256002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               69, 156
               

               Conread position:
               184-504
               

               Cow position:
               chrX:25232239-25232564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 227
               

               Conread position:
               184-560
               

               Cow position:
               chrX:10412333-10411950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 150
               

               Conread position:
               185-500
               

               Cow position:
               chrX:43648090-43647778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 178
               

               Conread position:
               187-429
               

               Cow position:
               chrX:42906778-42907014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 15
               

               Conread position:
               187-444
               

               Cow position:
               chrX:25329669-25329930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               67, 46
               

               Conread position:
               189-298
               

               Cow position:
               chrX:6487658-6487768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               190-409
               

               Cow position:
               chrX:5909836-5909614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               190-497
               

               Cow position:
               chrX:41403620-41403945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               190-497
               

               Cow position:
               chrX:41410168-41410493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               190-557
               

               Cow position:
               chrX:47481459-47481833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               190-574
               

               Cow position:
               chrX:31443161-31442779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 251
               

               Conread position:
               191-328
               

               Cow position:
               chrX:45851591-45851731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               191-396
               

               Cow position:
               chrX:21844294-21844504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               191-419
               

               Cow position:
               chrX:26754125-26753896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 221
               

               Conread position:
               191-450
               

               Cow position:
               chrX:29877521-29877257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-463
               

               Cow position:
               chrX:22567192-22567469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-503
               

               Cow position:
               chrX:30950188-30950505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-503
               

               Cow position:
               chrX:48310080-48309767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               191-505
               

               Cow position:
               chrX:23215767-23216086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-505
               

               Cow position:
               chrX:30686936-30686614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               62, 255
               

               Conread position:
               191-535
               

               Cow position:
               chrX:24966929-24967279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               235
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-535
               

               Cow position:
               chrX:30538492-30538142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-535
               

               Cow position:
               chrX:30899728-30899377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               62, 253
               

               Conread position:
               191-548
               

               Cow position:
               chrX:36778065-36778431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 258
               

               Conread position:
               191-562
               

               Cow position:
               chrX:11860582-11860200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-562
               

               Cow position:
               chrX:36479592-36479974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-571
               

               Cow position:
               chrX:24758037-24757646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               191-571
               

               Cow position:
               chrX:43767877-43767486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               62, 252
               

               Conread position:
               192-325
               

               Cow position:
               chrX:20954265-20954399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               192-498
               

               Cow position:
               chrX:46771311-46770992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               192-530
               

               Cow position:
               chrX:2425461-2425115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               61, 270
               

               Conread position:
               192-575
               

               Cow position:
               chrX:43114833-43115202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 103
               

               Conread position:
               193-498
               

               Cow position:
               chrX:15545559-15545859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 134
               

               Conread position:
               193-506
               

               Cow position:
               chrX:43527164-43527485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               193-560
               

               Cow position:
               chrX:18999560-18999922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 135
               

               Conread position:
               194-330
               

               Cow position:
               chrX:34006479-34006340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               194-397
               

               Cow position:
               chrX:37079876-37079671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               194-432
               

               Cow position:
               chrX:13225883-13226128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               55, 186
               

               Conread position:
               194-438
               

               Cow position:
               chrX:37544611-37544852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               58, 90
               

               Conread position:
               194-439
               

               Cow position:
               chrX:12852846-12852596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               194-442
               

               Cow position:
               chrX:48160813-48160569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               60, 92
               

               Conread position:
               194-445
               

               Cow position:
               chrX:7341471-7341733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               194-535
               

               Cow position:
               chrX:36820569-36820222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               59, 249
               

               Conread position:
               194-542
               

               Cow position:
               chrX:13196308-13195950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               59, 249
               

               Conread position:
               194-549
               

               Cow position:
               chrX:35803477-35803839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               59, 249
               

               Conread position:
               194-571
               

               Cow position:
               chrX:48328724-48328336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               59, 249
               

               Conread position:
               196-451
               

               Cow position:
               chrX:27458920-27459181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               58, 247
               

               Conread position:
               196-505
               

               Cow position:
               chrX:33639632-33639947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 55
               

               Conread position:
               196-562
               

               Cow position:
               chrX:38007103-38006728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 250
               

               Conread position:
               197-324
               

               Cow position:
               chrX:37905685-37905813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               197-450
               

               Cow position:
               chrX:23452932-23452674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               56, 246
               

               Conread position:
               197-505
               

               Cow position:
               chrX:7645924-7646227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 193
               

               Conread position:
               197-571
               

               Cow position:
               chrX:17605895-17605510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               56, 246
               

               Conread position:
               198-434
               

               Cow position:
               chrX:45421006-45420764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               57, 13
               

               Conread position:
               199-505
               

               Cow position:
               chrX:2812742-2812433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 30
               

               Conread position:
               200-333
               

               Cow position:
               chrX:38225752-38225886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               200-351
               

               Cow position:
               chrX:30337228-30337382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               202-438
               

               Cow position:
               chrX:19636581-19636819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               54, 136
               

               Conread position:
               202-450
               

               Cow position:
               chrX:33205321-33205075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 209
               

               Conread position:
               203-387
               

               Cow position:
               chrX:18459785-18459599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 59
               

               Conread position:
               203-405
               

               Cow position:
               chrX:30060859-30060655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               203-481
               

               Cow position:
               chrX:42855083-42855365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 80
               

               Conread position:
               203-505
               

               Cow position:
               chrX:29083797-29084099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               50, 75
               

               Conread position:
               204-332
               

               Cow position:
               chrX:34435376-34435247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               204-389
               

               Cow position:
               chrX:32214798-32214611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               204-390
               

               Cow position:
               chrX:8103420-8103232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               204-390
               

               Cow position:
               chrX:31839182-31839370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               204-409
               

               Cow position:
               chrX:26787999-26788204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               46, 124
               

               Conread position:
               204-429
               

               Cow position:
               chrX:33003929-33004159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 225
               

               Conread position:
               204-432
               

               Cow position:
               chrX:23080966-23081196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               50, 125
               

               Conread position:
               204-433
               

               Cow position:
               chrX:40322591-40322823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               131, 45
               

               Conread position:
               204-443
               

               Cow position:
               chrX:1655153-1655394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 169
               

               Conread position:
               204-445
               

               Cow position:
               chrX:26289010-26288766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 226
               

               Conread position:
               204-461
               

               Cow position:
               chrX:18990127-18989864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               204-505
               

               Cow position:
               chrX:34454347-34454639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 32
               

               Conread position:
               204-571
               

               Cow position:
               chrX:12850805-12851183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               49, 239
               

               Conread position:
               204-571
               

               Cow position:
               chrX:16074249-16074627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               49, 239
               

               Conread position:
               204-576
               

               Cow position:
               chrX:7508800-7509195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               205-402
               

               Cow position:
               chrX:15341364-15341165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               205-439
               

               Cow position:
               chrX:1518765-1518530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               48, 199
               

               Conread position:
               205-439
               

               Cow position:
               chrX:43789179-43788944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               51, 40
               

               Conread position:
               205-500
               

               Cow position:
               chrX:26492676-26492976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 250
               

               Conread position:
               205-505
               

               Cow position:
               chrX:29356261-29356566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               48, 238
               

               Conread position:
               205-548
               

               Cow position:
               chrX:15008758-15008407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               48, 240
               

               Conread position:
               205-562
               

               Cow position:
               chrX:29844802-29844434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               48, 238
               

               Conread position:
               206-390
               

               Cow position:
               chrX:15154668-15154854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               206-445
               

               Cow position:
               chrX:25302077-25301835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               44, 76
               

               Conread position:
               206-447
               

               Cow position:
               chrX:41049788-41050037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               206-504
               

               Cow position:
               chrX:11314103-11313810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               206-506
               

               Cow position:
               chrX:16783169-16783467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               47, 122
               

               Conread position:
               206-574
               

               Cow position:
               chrX:5638493-5638119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               207-329
               

               Cow position:
               chrX:10348158-10348034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               207-386
               

               Cow position:
               chrX:12021950-12022128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 166
               

               Conread position:
               209-367
               

               Cow position:
               chrX:9044178-9044020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 61
               

               Conread position:
               209-504
               

               Cow position:
               chrX:9161266-9161558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 180
               

               Conread position:
               209-505
               

               Cow position:
               chrX:27469976-27469675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               44, 234
               

               Conread position:
               209-546
               

               Cow position:
               chrX:36311277-36311591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               45, 109
               

               Conread position:
               210-429
               

               Cow position:
               chrX:18769580-18769801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               210-443
               

               Cow position:
               chrX:26619682-26619447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 21
               

               Conread position:
               211-505
               

               Cow position:
               chrX:28157167-28157472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 17
               

               Conread position:
               211-548
               

               Cow position:
               chrX:47873661-47873313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               42, 144
               

               Conread position:
               212-504
               

               Cow position:
               chrX:828573-828865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               41, 60
               

               Conread position:
               212-564
               

               Cow position:
               chrX:3658373-3658009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               41, 231
               

               Conread position:
               212-570
               

               Cow position:
               chrX:34990722-34991082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 122
               

               Conread position:
               214-505
               

               Cow position:
               chrX:28845527-28845805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 162
               

               Conread position:
               215-402
               

               Cow position:
               chrX:616719-616532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               215-438
               

               Cow position:
               chrX:36364903-36365132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 81
               

               Conread position:
               217-505
               

               Cow position:
               chrX:3895290-3894997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               36, 226
               

               Conread position:
               218-362
               

               Cow position:
               chrX:37129010-37129152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               218-438
               

               Cow position:
               chrX:23238187-23238413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               218-451
               

               Cow position:
               chrX:15304638-15304405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 174
               

               Conread position:
               218-505
               

               Cow position:
               chrX:4404222-4404511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               35, 225
               

               Conread position:
               218-505
               

               Cow position:
               chrX:14152528-14152244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               35, 186
               

               Conread position:
               218-542
               

               Cow position:
               chrX:42779439-42779105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               35, 224
               

               Conread position:
               218-563
               

               Cow position:
               chrX:42165762-42166118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               35, 225
               

               Conread position:
               218-568
               

               Cow position:
               chrX:19188623-19188975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 188
               

               Conread position:
               219-448
               

               Cow position:
               chrX:31058850-31059065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               35, 65
               

               Conread position:
               219-504
               

               Cow position:
               chrX:30162685-30162970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 244
               

               Conread position:
               219-505
               

               Cow position:
               chrX:7350990-7351275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               220-505
               

               Cow position:
               chrX:21011633-21011342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               33, 58
               

               Conread position:
               220-535
               

               Cow position:
               chrX:39704394-39704708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 89
               

               Conread position:
               221-506
               

               Cow position:
               chrX:4869233-4869523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               32, 222
               

               Conread position:
               221-536
               

               Cow position:
               chrX:45973990-45973662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               31, 228
               

               Conread position:
               222-392
               

               Cow position:
               chrX:45410352-45410179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               222-443
               

               Cow position:
               chrX:38794416-38794643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               224-402
               

               Cow position:
               chrX:48456651-48456472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               224-530
               

               Cow position:
               chrX:23451477-23451162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               225-397
               

               Cow position:
               chrX:24291988-24291814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               225-425
               

               Cow position:
               chrX:48135186-48134986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 74
               

               Conread position:
               225-439
               

               Cow position:
               chrX:25618224-25617998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               225-498
               

               Cow position:
               chrX:14924694-14924968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 124
               

               Conread position:
               225-505
               

               Cow position:
               chrX:33466311-33466584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               225-508
               

               Cow position:
               chrX:12826441-12826724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 136
               

               Conread position:
               225-535
               

               Cow position:
               chrX:20709769-20710081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               30, 58
               

               Conread position:
               225-547
               

               Cow position:
               chrX:46606816-46606487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               227-505
               

               Cow position:
               chrX:6038226-6037943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 236
               

               Conread position:
               228-344
               

               Cow position:
               chrX:170252-170134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               228-503
               

               Cow position:
               chrX:5047200-5046925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               26, 124
               

               Conread position:
               228-562
               

               Cow position:
               chrX:12032668-12033013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               25, 215
               

               Conread position:
               228-562
               

               Cow position:
               chrX:39667496-39667151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               25, 215
               

               Conread position:
               229-375
               

               Cow position:
               chrX:47854681-47854537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 47
               

               Conread position:
               229-399
               

               Cow position:
               chrX:5919168-5919341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 83
               

               Conread position:
               229-408
               

               Cow position:
               chrX:47023925-47024105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 153
               

               Conread position:
               229-504
               

               Cow position:
               chrX:20376668-20376941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               26, 55
               

               Conread position:
               229-558
               

               Cow position:
               chrX:30133626-30133286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 132
               

               Conread position:
               229-576
               

               Cow position:
               chrX:45414602-45414252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 213
               

               Conread position:
               230-483
               

               Cow position:
               chrX:23061153-23061398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 150
               

               Conread position:
               231-505
               

               Cow position:
               chrX:33020186-33020458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 232
               

               Conread position:
               232-444
               

               Cow position:
               chrX:4483845-4484060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               22, 170
               

               Conread position:
               232-503
               

               Cow position:
               chrX:1176273-1176007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               21, 90
               

               Conread position:
               232-504
               

               Cow position:
               chrX:24259874-24259610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               232-504
               

               Cow position:
               chrX:35273045-35273328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 222
               

               Conread position:
               232-526
               

               Cow position:
               chrX:18194614-18194914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               21, 160
               

               Conread position:
               232-530
               

               Cow position:
               chrX:23264736-23264430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               21, 213
               

               Conread position:
               232-570
               

               Cow position:
               chrX:44835115-44834768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               20, 305
               

               Conread position:
               233-443
               

               Cow position:
               chrX:39347084-39346868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               233-571
               

               Cow position:
               chrX:41238661-41238307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 94
               

               Conread position:
               233-574
               

               Cow position:
               chrX:19015144-19015487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 150
               

               Conread position:
               234-438
               

               Cow position:
               chrX:5507379-5507587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               235-442
               

               Cow position:
               chrX:6607113-6607336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 104
               

               Conread position:
               236-480
               

               Cow position:
               chrX:41886090-41885840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               236-542
               

               Cow position:
               chrX:43983875-43984194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 237
               

               Conread position:
               236-546
               

               Cow position:
               chrX:14221788-14222097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               18, 73
               

               Conread position:
               236-572
               

               Cow position:
               chrX:754663-755008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 209
               

               Conread position:
               236-574
               

               Cow position:
               chrX:35497791-35498126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               17, 207
               

               Conread position:
               238-505
               

               Cow position:
               chrX:21598385-21598641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               15, 112
               

               Conread position:
               238-535
               

               Cow position:
               chrX:25237885-25238185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               238-574
               

               Cow position:
               chrX:22482982-22482647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 207
               

               Conread position:
               239-448
               

               Cow position:
               chrX:37102333-37102136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 89
               

               Conread position:
               241-439
               

               Cow position:
               chrX:48675785-48675987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               241-500
               

               Cow position:
               chrX:35041931-35042194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 38
               

               Conread position:
               243-459
               

               Cow position:
               chrX:40734203-40733991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               53, 67
               

               Conread position:
               243-553
               

               Cow position:
               chrX:31294828-31294544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               10, 58
               

               Conread position:
               244-548
               

               Cow position:
               chrX:48195328-48195012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               245-501
               

               Cow position:
               chrX:16808042-16807781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               8, 201
               

               Conread position:
               245-505
               

               Cow position:
               chrX:45939732-45939475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               9, 161
               

               Conread position:
               245-548
               

               Cow position:
               chrX:46723027-46722711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 296
               

               Conread position:
               245-558
               

               Cow position:
               chrX:46033004-46032695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 77
               

               Conread position:
               245-562
               

               Cow position:
               chrX:24903798-24904126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               8, 104
               

               Conread position:
               246-574
               

               Cow position:
               chrX:4269352-4269015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 27
               

               Conread position:
               247-379
               

               Cow position:
               chrX:42928066-42927936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               5, 60
               

               Conread position:
               248-562
               

               Cow position:
               chrX:2467597-2467920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 48
               

               Conread position:
               248-576
               

               Cow position:
               chrX:10293445-10293106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               5, 195
               

               Conread position:
               249-445
               

               Cow position:
               chrX:16531718-16531913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               249-506
               

               Cow position:
               chrX:37416355-37416097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               250-435
               

               Cow position:
               chrX:29925856-29925674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               251-471
               

               Cow position:
               chrX:42590037-42589816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               72, 193
               

               Conread position:
               251-496
               

               Cow position:
               chrX:8730800-8731052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 198
               

               Conread position:
               251-498
               

               Cow position:
               chrX:37540851-37541091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               251-505
               

               Cow position:
               chrX:9997610-9997361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               251-505
               

               Cow position:
               chrX:20353346-20353087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               71, 192
               

               Conread position:
               251-506
               

               Cow position:
               chrX:16762493-16762744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 38
               

               Conread position:
               251-571
               

               Cow position:
               chrX:22915186-22915517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               5, 192
               

               Conread position:
               251-574
               

               Cow position:
               chrX:37836310-37836636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 26
               

               Conread position:
               251-574
               

               Cow position:
               chrX:42874699-42875033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 288
               

               Conread position:
               252-388
               

               Cow position:
               chrX:45955903-45956039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               75, 42
               

               Conread position:
               252-415
               

               Cow position:
               chrX:25587158-25587322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               252-458
               

               Cow position:
               chrX:40774746-40774540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 36
               

               Conread position:
               252-459
               

               Cow position:
               chrX:31556776-31556565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               75, 192
               

               Conread position:
               252-505
               

               Cow position:
               chrX:8925428-8925675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               70, 25
               

               Conread position:
               252-506
               

               Cow position:
               chrX:15038021-15037763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 34
               

               Conread position:
               252-535
               

               Cow position:
               chrX:33983884-33983596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 190
               

               Conread position:
               252-542
               

               Cow position:
               chrX:34175476-34175177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               69, 190
               

               Conread position:
               252-562
               

               Cow position:
               chrX:1749787-1749467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               69, 190
               

               Conread position:
               252-568
               

               Cow position:
               chrX:26709326-26709652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 190
               

               Conread position:
               252-571
               

               Cow position:
               chrX:23703043-23702714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               253-428
               

               Cow position:
               chrX:22136532-22136359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               74, 119
               

               Conread position:
               253-434
               

               Cow position:
               chrX:11973568-11973750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               69, 170
               

               Conread position:
               253-443
               

               Cow position:
               chrX:48211258-48211062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               253-500
               

               Cow position:
               chrX:30921908-30922155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               75, 105
               

               Conread position:
               253-503
               

               Cow position:
               chrX:35413353-35413593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 136
               

               Conread position:
               253-504
               

               Cow position:
               chrX:6675202-6674946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               47, 66
               

               Conread position:
               253-505
               

               Cow position:
               chrX:12017998-12018266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               253-505
               

               Cow position:
               chrX:28603191-28602936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               146, 65
               

               Conread position:
               254-430
               

               Cow position:
               chrX:12314078-12314251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 151
               

               Conread position:
               254-546
               

               Cow position:
               chrX:48800261-48800555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               255-481
               

               Cow position:
               chrX:34270141-34270352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               255-503
               

               Cow position:
               chrX:47191670-47191439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               67, 37
               

               Conread position:
               255-505
               

               Cow position:
               chrX:2963775-2964028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 189
               

               Conread position:
               255-507
               

               Cow position:
               chrX:158044-157798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               164, 53
               

               Conread position:
               255-571
               

               Cow position:
               chrX:22549029-22549353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 187
               

               Conread position:
               255-571
               

               Cow position:
               chrX:22815666-22815992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               66, 186
               

               Conread position:
               257-355
               

               Cow position:
               chrX:33799869-33799967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               64, 26
               

               Conread position:
               257-500
               

               Cow position:
               chrX:488217-488461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               131, 185
               

               Conread position:
               258-430
               

               Cow position:
               chrX:5856595-5856422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               141, 60
               

               Conread position:
               258-456
               

               Cow position:
               chrX:12865740-12865941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 95
               

               Conread position:
               258-499
               

               Cow position:
               chrX:45693834-45694070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               64, 103
               

               Conread position:
               258-505
               

               Cow position:
               chrX:40647706-40647960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 191
               

               Conread position:
               258-535
               

               Cow position:
               chrX:15094094-15094376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 184
               

               Conread position:
               258-562
               

               Cow position:
               chrX:41414056-41413742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 184
               

               Conread position:
               259-504
               

               Cow position:
               chrX:27509292-27509050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 195
               

               Conread position:
               259-535
               

               Cow position:
               chrX:19333440-19333159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 183
               

               Conread position:
               259-551
               

               Cow position:
               chrX:10095755-10096058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               68, 184
               

               Conread position:
               260-498
               

               Cow position:
               chrX:40183620-40183376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               260-547
               

               Cow position:
               chrX:5300622-5300918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 182
               

               Conread position:
               260-548
               

               Cow position:
               chrX:45404104-45403810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               260-574
               

               Cow position:
               chrX:17541694-17542010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               155, 144
               

               Conread position:
               263-505
               

               Cow position:
               chrX:2580132-2580378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               59, 183
               

               Conread position:
               263-505
               

               Cow position:
               chrX:20580019-20579772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               58, 102
               

               Conread position:
               263-506
               

               Cow position:
               chrX:16734290-16734536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               64, 76
               

               Conread position:
               263-571
               

               Cow position:
               chrX:17725711-17726022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 64
               

               Conread position:
               267-505
               

               Cow position:
               chrX:46073076-46072846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               268-436
               

               Cow position:
               chrX:47247171-47247005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               54, 142
               

               Conread position:
               268-443
               

               Cow position:
               chrX:31473260-31473441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               268-504
               

               Cow position:
               chrX:7362115-7361889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               268-505
               

               Cow position:
               chrX:2933460-2933698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               131, 51
               

               Conread position:
               268-535
               

               Cow position:
               chrX:27704515-27704243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 174
               

               Conread position:
               268-571
               

               Cow position:
               chrX:36931056-36931364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               132, 58
               

               Conread position:
               268-576
               

               Cow position:
               chrX:27432180-27431866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               269-441
               

               Cow position:
               chrX:45959321-45959144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               269-514
               

               Cow position:
               chrX:678831-678583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 164
               

               Conread position:
               270-533
               

               Cow position:
               chrX:45393377-45393110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               130, 76
               

               Conread position:
               271-504
               

               Cow position:
               chrX:20151591-20151823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               54, 118
               

               Conread position:
               272-502
               

               Cow position:
               chrX:30763677-30763450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               173, 13
               

               Conread position:
               272-505
               

               Cow position:
               chrX:32020380-32020145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               273-548
               

               Cow position:
               chrX:48652988-48652698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 270
               

               Conread position:
               273-558
               

               Cow position:
               chrX:46382033-46381743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               55, 90
               

               Conread position:
               274-500
               

               Cow position:
               chrX:7496989-7497209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               274-505
               

               Cow position:
               chrX:46425009-46424775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               9, 69
               

               Conread position:
               276-408
               

               Cow position:
               chrX:5556085-5555953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-469
               

               Cow position:
               chrX:48536919-48536724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               20, 62
               

               Conread position:
               277-490
               

               Cow position:
               chrX:28878415-28878210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               42, 110
               

               Conread position:
               277-505
               

               Cow position:
               chrX:25816149-25815934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               50, 110
               

               Conread position:
               277-535
               

               Cow position:
               chrX:35258981-35258725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               129, 40
               

               Conread position:
               277-547
               

               Cow position:
               chrX:41673850-41674126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               32, 6
               

               Conread position:
               277-552
               

               Cow position:
               chrX:24366082-24365794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               44, 33
               

               Conread position:
               278-493
               

               Cow position:
               chrX:42339188-42338980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               49, 132
               

               Conread position:
               278-504
               

               Cow position:
               chrX:42588924-42588695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               9, 198
               

               Conread position:
               278-505
               

               Cow position:
               chrX:23497915-23497694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               278-538
               

               Cow position:
               chrX:24234729-24234466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               279-547
               

               Cow position:
               chrX:39520706-39520429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 163
               

               Conread position:
               280-548
               

               Cow position:
               chrX:22856782-22857057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               41, 162
               

               Conread position:
               280-571
               

               Cow position:
               chrX:5288407-5288106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 164
               

               Conread position:
               280-574
               

               Cow position:
               chrX:27325035-27324733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               41, 162
               

               Conread position:
               281-445
               

               Cow position:
               chrX:45787405-45787567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               41, 131
               

               Conread position:
               283-439
               

               Cow position:
               chrX:37067085-37067250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               283-505
               

               Cow position:
               chrX:9572276-9572502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 159
               

               Conread position:
               283-505
               

               Cow position:
               chrX:9976189-9976415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 159
               

               Conread position:
               283-572
               

               Cow position:
               chrX:6278753-6278450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               284-504
               

               Cow position:
               chrX:25571242-25571023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               5, 13
               

               Conread position:
               286-465
               

               Cow position:
               chrX:42500250-42500427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               166, 39
               

               Conread position:
               286-551
               

               Cow position:
               chrX:20677121-20677392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 24
               

               Conread position:
               287-505
               

               Cow position:
               chrX:47042234-47042014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               35, 157
               

               Conread position:
               288-461
               

               Cow position:
               chrX:47232595-47232769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               34, 117
               

               Conread position:
               288-482
               

               Cow position:
               chrX:46701061-46700874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               288-505
               

               Cow position:
               chrX:32982007-32981790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               33, 150
               

               Conread position:
               288-505
               

               Cow position:
               chrX:35284375-35284594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               33, 104
               

               Conread position:
               288-505
               

               Cow position:
               chrX:42282190-42282402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               288-574
               

               Cow position:
               chrX:40035693-40035392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               11, 139
               

               Conread position:
               289-402
               

               Cow position:
               chrX:7710932-7710819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-439
               

               Cow position:
               chrX:18468796-18468945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               289-443
               

               Cow position:
               chrX:37364506-37364655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               289-447
               

               Cow position:
               chrX:10107216-10107056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 57
               

               Conread position:
               289-450
               

               Cow position:
               chrX:20167963-20168130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               289-462
               

               Cow position:
               chrX:21663068-21663246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               33, 54
               

               Conread position:
               289-498
               

               Cow position:
               chrX:30833079-30832882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               289-499
               

               Cow position:
               chrX:27176561-27176344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               289-502
               

               Cow position:
               chrX:6694671-6694458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               173, 96
               

               Conread position:
               289-504
               

               Cow position:
               chrX:19930416-19930624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               289-504
               

               Cow position:
               chrX:38840647-38840862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               39, 100
               

               Conread position:
               289-505
               

               Cow position:
               chrX:1514645-1514436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 110
               

               Conread position:
               289-505
               

               Cow position:
               chrX:47757170-47756954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               38, 187
               

               Conread position:
               289-510
               

               Cow position:
               chrX:9416934-9416714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 152
               

               Conread position:
               289-524
               

               Cow position:
               chrX:8558704-8558462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               36, 214
               

               Conread position:
               289-548
               

               Cow position:
               chrX:34663080-34662831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               289-562
               

               Cow position:
               chrX:17631043-17630765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               217, 151
               

               Conread position:
               289-574
               

               Cow position:
               chrX:9635422-9635140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 152
               

               Conread position:
               289-576
               

               Cow position:
               chrX:40788964-40789264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               290-428
               

               Cow position:
               chrX:33519377-33519520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               290-435
               

               Cow position:
               chrX:31745287-31745138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               290-446
               

               Cow position:
               chrX:42530691-42530538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               33, 60
               

               Conread position:
               290-462
               

               Cow position:
               chrX:42499269-42499095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               37, 154
               

               Conread position:
               290-493
               

               Cow position:
               chrX:2206784-2206588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               37, 118
               

               Conread position:
               290-500
               

               Cow position:
               chrX:7425224-7425438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               24, 168
               

               Conread position:
               290-500
               

               Cow position:
               chrX:8682170-8681958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 84
               

               Conread position:
               290-502
               

               Cow position:
               chrX:10373067-10373286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               33, 164
               

               Conread position:
               290-503
               

               Cow position:
               chrX:42011040-42011251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               108, 154
               

               Conread position:
               290-504
               

               Cow position:
               chrX:6563272-6563494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               35, 69
               

               Conread position:
               290-504
               

               Cow position:
               chrX:29032177-29032383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               290-504
               

               Cow position:
               chrX:44961507-44961722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               48, 71
               

               Conread position:
               290-505
               

               Cow position:
               chrX:11455292-11455073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               66, 41
               

               Conread position:
               290-505
               

               Cow position:
               chrX:16416268-16416482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               290-505
               

               Cow position:
               chrX:25411600-25411815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               86, 37
               

               Conread position:
               290-505
               

               Cow position:
               chrX:43049102-43049323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               32, 158
               

               Conread position:
               290-505
               

               Cow position:
               chrX:46044804-46045020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               38, 153
               

               Conread position:
               290-506
               

               Cow position:
               chrX:21004444-21004656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               116, 39
               

               Conread position:
               290-506
               

               Cow position:
               chrX:47249028-47248811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               40, 109
               

               Conread position:
               290-507
               

               Cow position:
               chrX:8517636-8517845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               37, 58
               

               Conread position:
               290-536
               

               Cow position:
               chrX:1105044-1104793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 154
               

               Conread position:
               290-548
               

               Cow position:
               chrX:34543547-34543807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 76
               

               Conread position:
               290-551
               

               Cow position:
               chrX:21672311-21672580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 154
               

               Conread position:
               290-551
               

               Cow position:
               chrX:32419970-32420240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               33, 161
               

               Conread position:
               290-552
               

               Cow position:
               chrX:37119359-37119623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               32, 86
               

               Conread position:
               290-553
               

               Cow position:
               chrX:23970149-23970407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               221, 96
               

               Conread position:
               290-553
               

               Cow position:
               chrX:41884658-41884384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               37, 155
               

               Conread position:
               290-560
               

               Cow position:
               chrX:9855060-9855334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               32, 156
               

               Conread position:
               290-560
               

               Cow position:
               chrX:9953901-9954175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               32, 156
               

               Conread position:
               290-562
               

               Cow position:
               chrX:23514258-23513977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 60
               

               Conread position:
               290-562
               

               Cow position:
               chrX:38935041-38935319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               33, 180
               

               Conread position:
               290-562
               

               Cow position:
               chrX:44053018-44053296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               37, 151
               

               Conread position:
               290-574
               

               Cow position:
               chrX:2029150-2029436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               105, 162
               

               Conread position:
               290-574
               

               Cow position:
               chrX:22624241-22624526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               37, 69
               

               Conread position:
               290-574
               

               Cow position:
               chrX:27394254-27393976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 118
               

               Conread position:
               290-575
               

               Cow position:
               chrX:619248-618951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 155
               

               Conread position:
               290-575
               

               Cow position:
               chrX:26876121-26875830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 51
               

               Conread position:
               290-575
               

               Cow position:
               chrX:38642020-38642300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               109, 37
               

               Conread position:
               290-576
               

               Cow position:
               chrX:33493535-33493831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               66, 75
               

               Conread position:
               291-449
               

               Cow position:
               chrX:8492997-8492833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               291-505
               

               Cow position:
               chrX:45598843-45598627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 149
               

               Conread position:
               291-536
               

               Cow position:
               chrX:777033-776777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               37, 159
               

               Conread position:
               291-551
               

               Cow position:
               chrX:9360644-9360913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               36, 83
               

               Conread position:
               291-576
               

               Cow position:
               chrX:11939163-11938881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 46
               

               Conread position:
               292-488
               

               Cow position:
               chrX:20129207-20129013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               134, 30
               

               Conread position:
               292-505
               

               Cow position:
               chrX:41167202-41166990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               292-552
               

               Cow position:
               chrX:42492748-42492496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 18
               

               Conread position:
               292-574
               

               Cow position:
               chrX:27680165-27680448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               214, 35
               

               Conread position:
               293-443
               

               Cow position:
               chrX:9837901-9838056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               293-459
               

               Cow position:
               chrX:28856740-28856904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               106, 95
               

               Conread position:
               293-498
               

               Cow position:
               chrX:4768513-4768708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               32, 89
               

               Conread position:
               293-500
               

               Cow position:
               chrX:2648587-2648384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               293-505
               

               Cow position:
               chrX:17662834-17662619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 152
               

               Conread position:
               293-506
               

               Cow position:
               chrX:16689258-16689472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               293-552
               

               Cow position:
               chrX:40116188-40116444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               216, 34
               

               Conread position:
               293-557
               

               Cow position:
               chrX:6690485-6690227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               35, 101
               

               Conread position:
               293-574
               

               Cow position:
               chrX:27772193-27771915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               219, 35
               

               Conread position:
               294-483
               

               Cow position:
               chrX:30421175-30420977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               74, 157
               

               Conread position:
               294-500
               

               Cow position:
               chrX:11589828-11589618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               46, 152
               

               Conread position:
               294-556
               

               Cow position:
               chrX:20752027-20752285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               212, 24
               

               Conread position:
               294-570
               

               Cow position:
               chrX:15814861-15815122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               28, 88
               

               Conread position:
               295-489
               

               Cow position:
               chrX:27514633-27514833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               27, 181
               

               Conread position:
               295-504
               

               Cow position:
               chrX:21664957-21664749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               109, 7
               

               Conread position:
               295-575
               

               Cow position:
               chrX:22074565-22074847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 146
               

               Conread position:
               296-437
               

               Cow position:
               chrX:23017771-23017914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               98, 22
               

               Conread position:
               296-470
               

               Cow position:
               chrX:6643026-6643198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               296-498
               

               Cow position:
               chrX:877257-877061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               296-548
               

               Cow position:
               chrX:48010360-48010627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               296-549
               

               Cow position:
               chrX:30963106-30962854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               30, 107
               

               Conread position:
               296-560
               

               Cow position:
               chrX:13382090-13382367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 151
               

               Conread position:
               296-574
               

               Cow position:
               chrX:11856195-11856480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               298-468
               

               Cow position:
               chrX:32623351-32623523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               298-483
               

               Cow position:
               chrX:6639892-6640082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               153
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               298-498
               

               Cow position:
               chrX:45566398-45566603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 137
               

               Conread position:
               298-499
               

               Cow position:
               chrX:39558580-39558382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               24, 118
               

               Conread position:
               298-504
               

               Cow position:
               chrX:2383257-2383462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               113, 143
               

               Conread position:
               298-505
               

               Cow position:
               chrX:38549216-38549421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               29, 146
               

               Conread position:
               298-548
               

               Cow position:
               chrX:17231502-17231758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 107
               

               Conread position:
               298-548
               

               Cow position:
               chrX:36975717-36975975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               298-576
               

               Cow position:
               chrX:9201315-9201600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 146
               

               Conread position:
               299-444
               

               Cow position:
               chrX:10462406-10462550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               299-498
               

               Cow position:
               chrX:18456161-18456368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               299-500
               

               Cow position:
               chrX:22821816-22822020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 143
               

               Conread position:
               299-505
               

               Cow position:
               chrX:5900226-5900443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               36, 110
               

               Conread position:
               299-505
               

               Cow position:
               chrX:36283114-36283326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               299-545
               

               Cow position:
               chrX:8070931-8070679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               104, 36
               

               Conread position:
               299-562
               

               Cow position:
               chrX:12980060-12979796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               299-562
               

               Cow position:
               chrX:14900952-14900692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               211, 139
               

               Conread position:
               299-562
               

               Cow position:
               chrX:37910222-37910483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               300-574
               

               Cow position:
               chrX:21642708-21642432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               98, 53
               

               Conread position:
               302-445
               

               Cow position:
               chrX:18812030-18812170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               302-446
               

               Cow position:
               chrX:4554170-4554317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 64
               

               Conread position:
               302-456
               

               Cow position:
               chrX:1728645-1728493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               137, 25
               

               Conread position:
               302-491
               

               Cow position:
               chrX:7513288-7513474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               302-499
               

               Cow position:
               chrX:13265848-13265657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               25, 113
               

               Conread position:
               302-504
               

               Cow position:
               chrX:11746614-11746820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               97, 143
               

               Conread position:
               302-505
               

               Cow position:
               chrX:37048809-37048603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 145
               

               Conread position:
               302-526
               

               Cow position:
               chrX:4482734-4482963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               302-562
               

               Cow position:
               chrX:35542663-35542933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 143
               

               Conread position:
               302-576
               

               Cow position:
               chrX:42381328-42381060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               25, 103
               

               Conread position:
               303-503
               

               Cow position:
               chrX:13245364-13245567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 141
               

               Conread position:
               303-503
               

               Cow position:
               chrX:48684450-48684253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               24, 93
               

               Conread position:
               304-478
               

               Cow position:
               chrX:4865025-4865193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 99
               

               Conread position:
               304-505
               

               Cow position:
               chrX:7721758-7721963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               18, 142
               

               Conread position:
               304-558
               

               Cow position:
               chrX:4942976-4942729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               305-500
               

               Cow position:
               chrX:28013665-28013478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               305-504
               

               Cow position:
               chrX:20792043-20791845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 137
               

               Conread position:
               305-505
               

               Cow position:
               chrX:29509669-29509467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               305-505
               

               Cow position:
               chrX:46315604-46315403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               95, 22
               

               Conread position:
               305-506
               

               Cow position:
               chrX:28836129-28835930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               305-547
               

               Cow position:
               chrX:4750523-4750281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               200, 25
               

               Conread position:
               305-574
               

               Cow position:
               chrX:9041454-9041194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               110, 99
               

               Conread position:
               306-528
               

               Cow position:
               chrX:13191768-13191553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 134
               

               Conread position:
               306-529
               

               Cow position:
               chrX:17042466-17042695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 163
               

               Conread position:
               306-548
               

               Cow position:
               chrX:34385105-34385348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 138
               

               Conread position:
               307-535
               

               Cow position:
               chrX:16541899-16541667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               88, 20
               

               Conread position:
               307-574
               

               Cow position:
               chrX:6265809-6265548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               307-574
               

               Cow position:
               chrX:6488363-6488629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 86
               

               Conread position:
               308-426
               

               Cow position:
               chrX:29193786-29193904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               81, 65
               

               Conread position:
               309-575
               

               Cow position:
               chrX:37574635-37574891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 105
               

               Conread position:
               310-500
               

               Cow position:
               chrX:280914-281093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               310-505
               

               Cow position:
               chrX:1503119-1503310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               46, 50
               

               Conread position:
               310-507
               

               Cow position:
               chrX:10959623-10959421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 144
               

               Conread position:
               310-562
               

               Cow position:
               chrX:23091661-23091908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               17, 132
               

               Conread position:
               310-574
               

               Cow position:
               chrX:29602053-29601778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               12, 28
               

               Conread position:
               311-576
               

               Cow position:
               chrX:37781332-37781057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 16
               

               Conread position:
               313-471
               

               Cow position:
               chrX:25036918-25036755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               313-503
               

               Cow position:
               chrX:11633461-11633652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               313-503
               

               Cow position:
               chrX:48236594-48236791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 131
               

               Conread position:
               313-574
               

               Cow position:
               chrX:29120841-29121097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               193, 14
               

               Conread position:
               314-503
               

               Cow position:
               chrX:45015369-45015551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               13, 76
               

               Conread position:
               314-566
               

               Cow position:
               chrX:40567383-40567640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               14, 167
               

               Conread position:
               315-562
               

               Cow position:
               chrX:39126123-39126364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               315-571
               

               Cow position:
               chrX:10123562-10123306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               15, 171
               

               Conread position:
               316-546
               

               Cow position:
               chrX:7161858-7162080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               186, 37
               

               Conread position:
               318-548
               

               Cow position:
               chrX:9425953-9425720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               85, 124
               

               Conread position:
               319-574
               

               Cow position:
               chrX:3579735-3579994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               133, 8
               

               Conread position:
               320-505
               

               Cow position:
               chrX:27174785-27174971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               11, 122
               

               Conread position:
               321-492
               

               Cow position:
               chrX:16324172-16324003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               321-504
               

               Cow position:
               chrX:46430066-46429887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               321-505
               

               Cow position:
               chrX:44063925-44063746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               122, 138
               

               Conread position:
               321-505
               

               Cow position:
               chrX:47046728-47046532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               321-506
               

               Cow position:
               chrX:47453918-47454105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               97, 83
               

               Conread position:
               321-562
               

               Cow position:
               chrX:45110447-45110693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               74, 110
               

               Conread position:
               321-571
               

               Cow position:
               chrX:34411631-34411893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               10, 108
               

               Conread position:
               321-571
               

               Cow position:
               chrX:45845887-45846148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 122
               

               Conread position:
               321-576
               

               Cow position:
               chrX:29542427-29542165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               184, 119
               

               Conread position:
               321-576
               

               Cow position:
               chrX:38852988-38853250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               77, 121
               

               Conread position:
               322-472
               

               Cow position:
               chrX:46672814-46672663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               322-491
               

               Cow position:
               chrX:4826035-4825860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               69, 115
               

               Conread position:
               322-552
               

               Cow position:
               chrX:26285772-26286008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               121, 139
               

               Conread position:
               323-493
               

               Cow position:
               chrX:16996300-16996464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               121, 74
               

               Conread position:
               323-574
               

               Cow position:
               chrX:841952-842207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               121, 81
               

               Conread position:
               323-574
               

               Cow position:
               chrX:46587611-46587872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               75, 91
               

               Conread position:
               324-489
               

               Cow position:
               chrX:29770384-29770215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               324-574
               

               Cow position:
               chrX:39938728-39938473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               73, 88
               

               Conread position:
               326-548
               

               Cow position:
               chrX:29545083-29544854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               69, 54
               

               Conread position:
               326-552
               

               Cow position:
               chrX:17908487-17908261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               328-560
               

               Cow position:
               chrX:1499468-1499701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               178, 67
               

               Conread position:
               329-557
               

               Cow position:
               chrX:43780053-43779814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               61, 118
               

               Conread position:
               330-498
               

               Cow position:
               chrX:45148975-45149148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               330-505
               

               Cow position:
               chrX:7336629-7336803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               330-551
               

               Cow position:
               chrX:4091448-4091666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               120, 74
               

               Conread position:
               331-548
               

               Cow position:
               chrX:47301102-47300880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               63, 137
               

               Conread position:
               332-505
               

               Cow position:
               chrX:40809489-40809663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               332-564
               

               Cow position:
               chrX:33000706-33000937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               94, 72
               

               Conread position:
               332-571
               

               Cow position:
               chrX:36961438-36961688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               66, 207
               

               Conread position:
               332-576
               

               Cow position:
               chrX:10252379-10252145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 17
               

               Conread position:
               334-550
               

               Cow position:
               chrX:47484467-47484239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               334-551
               

               Cow position:
               chrX:7863768-7863555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               16, 145
               

               Conread position:
               336-532
               

               Cow position:
               chrX:18195748-18195934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               103, 50
               

               Conread position:
               337-541
               

               Cow position:
               chrX:8991695-8991901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               168, 73
               

               Conread position:
               339-500
               

               Cow position:
               chrX:44657155-44656992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               59, 84
               

               Conread position:
               339-518
               

               Cow position:
               chrX:23785463-23785652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               339-576
               

               Cow position:
               chrX:31311835-31312081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               61, 105
               

               Conread position:
               340-506
               

               Cow position:
               chrX:1505523-1505684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               341-505
               

               Cow position:
               chrX:42235722-42235554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 106
               

               Conread position:
               343-504
               

               Cow position:
               chrX:31256681-31256839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               348-505
               

               Cow position:
               chrX:32820848-32821004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               348-576
               

               Cow position:
               chrX:36067838-36068067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               157, 52
               

               Conread position:
               350-574
               

               Cow position:
               chrX:48044379-48044149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               351-505
               

               Cow position:
               chrX:36060973-36061132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               352-505
               

               Cow position:
               chrX:29680438-29680286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 90
               

               Conread position:
               352-571
               

               Cow position:
               chrX:47186498-47186277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               106, 89
               

               Conread position:
               353-562
               

               Cow position:
               chrX:22387423-22387208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               31, 5
               

               Conread position:
               355-576
               

               Cow position:
               chrX:27145449-27145656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               200, 85
               

               Conread position:
               356-575
               

               Cow position:
               chrX:34792484-34792260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               44, 63
               

               Conread position:
               357-489
               

               Cow position:
               chrX:41271380-41271249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               357-552
               

               Cow position:
               chrX:41992213-41992019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               82, 5
               

               Conread position:
               358-472
               

               Cow position:
               chrX:4398954-4399070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 86
               

               Conread position:
               359-494
               

               Cow position:
               chrX:22921143-22921283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               359-574
               

               Cow position:
               chrX:25208017-25207805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               39, 149
               

               Conread position:
               360-547
               

               Cow position:
               chrX:35885899-35885705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               361-505
               

               Cow position:
               chrX:14003813-14003667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               37, 84
               

               Conread position:
               364-506
               

               Cow position:
               chrX:10128839-10128984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               34, 81
               

               Conread position:
               364-552
               

               Cow position:
               chrX:48385529-48385335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               366-562
               

               Cow position:
               chrX:41068564-41068763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               142, 21
               

               Conread position:
               373-553
               

               Cow position:
               chrX:31252258-31252445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               27, 72
               

               Conread position:
               373-574
               

               Cow position:
               chrX:36355959-36356162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               129, 67
               

               Conread position:
               374-505
               

               Cow position:
               chrX:35969238-35969111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               116, 30
               

               Conread position:
               375-500
               

               Cow position:
               chrX:23666968-23667093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               90, 66
               

               Conread position:
               375-505
               

               Cow position:
               chrX:27227969-27228102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               377-575
               

               Cow position:
               chrX:20584166-20584379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 70
               

               Conread position:
               378-561
               

               Cow position:
               chrX:38066605-38066418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               17, 67
               

               Conread position:
               384-548
               

               Cow position:
               chrX:29723596-29723763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               123, 55
               

               Conread position:
               385-489
               

               Cow position:
               chrX:12405531-12405425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               385-552
               

               Cow position:
               chrX:34313889-34314058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               120, 39
               

               Conread position:
               385-560
               

               Cow position:
               chrX:11085201-11085027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               168, 56
               

               Conread position:
               386-552
               

               Cow position:
               chrX:11614556-11614725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               121, 54
               

               Conread position:
               389-575
               

               Cow position:
               chrX:41870933-41871118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               127, 50
               

               Conread position:
               390-574
               

               Cow position:
               chrX:27685108-27685298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               116, 51
               

               Conread position:
               391-574
               

               Cow position:
               chrX:45976782-45976976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               392-552
               

               Cow position:
               chrX:7710680-7710512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               52, 145
               

               Conread position:
               395-574
               

               Cow position:
               chrX:41027023-41027209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               111, 44
               

               Conread position:
               395-575
               

               Cow position:
               chrX:616396-616208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               110, 46
               

               Conread position:
               397-560
               

               Cow position:
               chrX:9365807-9365640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               109, 42
               

               Conread position:
               398-505
               

               Cow position:
               chrX:19273854-19273748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 44
               

               Conread position:
               398-574
               

               Cow position:
               chrX:42873261-42873437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               398-575
               

               Cow position:
               chrX:40685462-40685277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               106, 54
               

               Conread position:
               399-574
               

               Cow position:
               chrX:45875261-45875442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               403-574
               

               Cow position:
               chrX:19003174-19003347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               103, 38
               

               Conread position:
               409-571
               

               Cow position:
               chrX:26881688-26881518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               96, 32
               

               Conread position:
               414-576
               

               Cow position:
               chrX:29229894-29230051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               8, 28
               
Show alignments to all cow chromosomes.
Conread position:	93-505
Cow position:	chrX:19196956-19196539 (view UCSC Genome Browser custom track)
Alignm length:	421
Alignm identity:	273
Alignm E-value:	1.99993e-41
Alignm gaps (pig, cow):	39, 11
Conread position:	99-448
Cow position:	chrX:35633193-35632834 (view UCSC Genome Browser custom track)
Alignm length:	362
Alignm identity:	249
Alignm E-value:	2.94273e-44
Alignm gaps (pig, cow):	21, 198
Conread position:	99-506
Cow position:	chrX:20888077-20887670 (view UCSC Genome Browser custom track)
Alignm length:	416
Alignm identity:	298
Alignm E-value:	0
Alignm gaps (pig, cow):	13, 27
Conread position:	105-454
Cow position:	chrX:3161449-3161090 (view UCSC Genome Browser custom track)
Alignm length:	362
Alignm identity:	258
Alignm E-value:	0
Alignm gaps (pig, cow):	60, 24
Conread position:	105-504
Cow position:	chrX:32743109-32743508 (view UCSC Genome Browser custom track)
Alignm length:	407
Alignm identity:	292
Alignm E-value:	0
Alignm gaps (pig, cow):	25, 309
Conread position:	105-562
Cow position:	chrX:2362072-2362541 (view UCSC Genome Browser custom track)
Alignm length:	471
Alignm identity:	310
Alignm E-value:	0
Alignm gaps (pig, cow):	16, 339
Conread position:	106-489
Cow position:	chrX:48248394-48248786 (view UCSC Genome Browser custom track)
Alignm length:	394
Alignm identity:	277
Alignm E-value:	0
Alignm gaps (pig, cow):	72, 362
Conread position:	106-552
Cow position:	chrX:42994188-42994640 (view UCSC Genome Browser custom track)
Alignm length:	461
Alignm identity:	353
Alignm E-value:	0
Alignm gaps (pig, cow):	22, 265
Conread position:	106-571
Cow position:	chrX:42171730-42171247 (view UCSC Genome Browser custom track)
Alignm length:	489
Alignm identity:	364
Alignm E-value:	0
Alignm gaps (pig, cow):	15, 181
Conread position:	108-505
Cow position:	chrX:32010605-32011010 (view UCSC Genome Browser custom track)
Alignm length:	407
Alignm identity:	275
Alignm E-value:	0
Alignm gaps (pig, cow):	20, 338
Conread position:	110-431
Cow position:	chrX:41433840-41433521 (view UCSC Genome Browser custom track)
Alignm length:	326
Alignm identity:	235
Alignm E-value:	0
Alignm gaps (pig, cow):	20, 39
Conread position:	110-438
Cow position:	chrX:45467641-45467306 (view UCSC Genome Browser custom track)
Alignm length:	336
Alignm identity:	222
Alignm E-value:	5e-37
Alignm gaps (pig, cow):	143, 0
Conread position:	112-419
Cow position:	chrX:9593554-9593246 (view UCSC Genome Browser custom track)
Alignm length:	310
Alignm identity:	210
Alignm E-value:	2e-40
Alignm gaps (pig, cow):	141, 292
Conread position:	113-289
Cow position:	chrX:8517185-8517367 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	133
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	53, 16
Conread position:	113-463
Cow position:	chrX:33822679-33823034 (view UCSC Genome Browser custom track)
Alignm length:	362
Alignm identity:	245
Alignm E-value:	5e-38
Alignm gaps (pig, cow):	19, 7
Conread position:	114-333
Cow position:	chrX:42728528-42728756 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	154
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	14, 0
Conread position:	114-405
Cow position:	chrX:11377151-11377452 (view UCSC Genome Browser custom track)
Alignm length:	302
Alignm identity:	196
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	14, 0
Conread position:	114-429
Cow position:	chrX:41306052-41305729 (view UCSC Genome Browser custom track)
Alignm length:	328
Alignm identity:	219
Alignm E-value:	7e-30
Alignm gaps (pig, cow):	15, 206
Conread position:	114-445
Cow position:	chrX:2465703-2465360 (view UCSC Genome Browser custom track)
Alignm length:	347
Alignm identity:	226
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	52, 25
Conread position:	114-502
Cow position:	chrX:35409248-35409628 (view UCSC Genome Browser custom track)
Alignm length:	393
Alignm identity:	301
Alignm E-value:	0
Alignm gaps (pig, cow):	16, 215