Cow genome map

Conread name: Ss1.1-rret34_c10.5

Conread position: 513-744
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 12

Conread position: 516-707
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 80, 27

Conread position: 538-708
Cow position:
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 29

Conread position: 558-720
Cow position:
Alignm length: 167
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 37, 84

Conread position: 559-708
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 88

Conread position: 560-700
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 560-708
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 65

Conread position: 560-744
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 85

Conread position: 563-706
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 81

Conread position: 563-707
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 83

Conread position: 563-738
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 81, 28

Conread position: 564-708
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 80

Conread position: 565-707
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 79

Conread position: 565-708
Cow position:
Alignm length: 150
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 81

Conread position: 565-708
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 565-708
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 93, 32

Conread position: 565-712
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 82

Conread position: 566-714
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 80

Conread position: 567-708
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 77

Conread position: 569-701
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 30, 60

Conread position: 569-703
Cow position:
Alignm length: 141
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 77

Conread position: 569-706
Cow position:
Alignm length: 142
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 40

Conread position: 569-706
Cow position:
Alignm length: 140
Alignm identity: 114
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 28, 75

Conread position: 569-708
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 75

Conread position: 569-708
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 569-708
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 73

Conread position: 569-708
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 75

Conread position: 569-708
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 569-708
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 45, 74

Conread position: 569-708
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 89, 74

Conread position: 569-708
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 569-708
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 30

Conread position: 569-708
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 78

Conread position: 569-708
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 75

Conread position: 569-708
Cow position:
Alignm length: 146
Alignm identity: 120
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 25, 74

Conread position: 569-708
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 75

Conread position: 569-708
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 75

Conread position: 569-708
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 47

Conread position: 569-708
Cow position:
Alignm length: 140
Alignm identity: 115
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 569-708
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 569-708
Cow position:
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 77

Conread position: 569-708
Cow position:
Alignm length: 147
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 30, 76

Conread position: 569-717
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 73

Conread position: 569-718
Cow position:
Alignm length: 156
Alignm identity: 127
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 569-718
Cow position:
Alignm length: 155
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 74

Conread position: 569-718
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 75

Conread position: 569-720
Cow position:
Alignm length: 156
Alignm identity: 131
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 30, 77

Conread position: 569-720
Cow position:
Alignm length: 160
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 78

Conread position: 569-720
Cow position:
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 77

Conread position: 569-721
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 75

Conread position: 569-721
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 101

Conread position: 570-708
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 570-718
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 74

Conread position: 572-696
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 72

Conread position: 572-697
Cow position:
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 572-697
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 79

Conread position: 572-697
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 72

Conread position: 572-700
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 73

Conread position: 572-706
Cow position:
Alignm length: 139
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 76

Conread position: 572-707
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 63

Conread position: 572-708
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 100

Conread position: 572-708
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 72

Conread position: 572-708
Cow position:
Alignm length: 142
Alignm identity: 116
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 82, 71

Conread position: 572-708
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 72

Conread position: 572-708
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 72

Conread position: 572-708
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 572-708
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 72

Conread position: 572-708
Cow position:
Alignm length: 142
Alignm identity: 119
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 28, 46

Conread position: 572-708
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 572-708
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 69

Conread position: 572-708
Cow position:
Alignm length: 139
Alignm identity: 116
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 75

Conread position: 572-708
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 74

Conread position: 572-708
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 31

Conread position: 572-708
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 572-708
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 29, 73

Conread position: 572-708
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 27

Conread position: 572-708
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 572-708
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 86, 71

Conread position: 572-709
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 75

Conread position: 572-718
Cow position:
Alignm length: 148
Alignm identity: 121
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 86, 27

Conread position: 572-718
Cow position:
Alignm length: 149
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 74

Conread position: 572-720
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 572-720
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 71

Conread position: 572-738
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 573-719
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 76

Conread position: 573-736
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 53

Conread position: 573-743
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 84, 30

Conread position: 574-708
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 21, 67

Conread position: 574-708
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 84, 25

Conread position: 574-708
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 25, 70

Conread position: 575-678
Cow position:
Alignm length: 106
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 71

Conread position: 575-697
Cow position:
Alignm length: 127
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 69

Conread position: 575-697
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 69

Conread position: 575-704
Cow position:
Alignm length: 132
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 72

Conread position: 575-706
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 68

Conread position: 575-706
Cow position:
Alignm length: 134
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 32

Conread position: 575-708
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 575-708
Cow position:
Alignm length: 140
Alignm identity: 115
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 19, 69

Conread position: 575-708
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 22, 36

Conread position: 575-708
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 59

Conread position: 575-708
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 575-708
Cow position:
Alignm length: 140
Alignm identity: 115
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 19, 69

Conread position: 575-708
Cow position:
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 575-708
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 575-708
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 69

Conread position: 575-708
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 575-708
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 79, 68

Conread position: 575-709
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 24

Conread position: 575-718
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 66

Conread position: 575-723
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 67

Conread position: 575-743
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 23, 69

Conread position: 576-708
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 67

Conread position: 576-708
Cow position:
Alignm length: 135
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 42

Conread position: 576-720
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 74

Conread position: 576-720
Cow position:
Alignm length: 150
Alignm identity: 125
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 68

Conread position: 576-726
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 59

Conread position: 576-740
Cow position:
Alignm length: 173
Alignm identity: 140
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 70

Conread position: 577-707
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 23

Conread position: 578-708
Cow position:
Alignm length: 136
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 578-708
Cow position:
Alignm length: 132
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 80, 20

Conread position: 582-708
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 75, 61

Conread position: 583-708
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 587-708
Cow position:
Alignm length: 122
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 587-708
Cow position:
Alignm length: 127
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 64, 56

Conread position: 588-708
Cow position:
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 59

Conread position: 588-720
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 122, 57

Conread position: 589-708
Cow position:
Alignm length: 120
Alignm identity: 102
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 590-708
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 592-708
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 66, 51

Conread position: 593-707
Cow position:
Alignm length: 116
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 50

Conread position: 593-707
Cow position:
Alignm length: 116
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 52

Conread position: 593-708
Cow position:
Alignm length: 119
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 608-708
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 37

Show alignments to all cow chromosomes.