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Cow genome map

           
Conread name:
           
Ss1.1-rret34_c10.5
        

               
Conread position:
               
441-708
               

               
Cow position:
               
chr27:20562053-20561786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
532-709
               

               
Cow position:
               
chr27:22330423-22330593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
536-708
               

               
Cow position:
               
chr27:23882128-23882301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
556-700
               

               
Cow position:
               
chr27:27040838-27040692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
556-707
               

               
Cow position:
               
chr27:2957640-2957478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
556-708
               

               
Cow position:
               
chr27:17397219-17397374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
556-708
               

               
Cow position:
               
chr27:20283860-20283718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
556-721
               

               
Cow position:
               
chr27:20067751-20067917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
558-708
               

               
Cow position:
               
chr27:1884263-1884113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
559-708
               

               
Cow position:
               
chr27:8291784-8291926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 86
               

               
Conread position:
               
560-676
               

               
Cow position:
               
chr27:23083780-23083662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
560-706
               

               
Cow position:
               
chr27:6899490-6899639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
560-708
               

               
Cow position:
               
chr27:13638767-13638916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 84
               

               
Conread position:
               
560-718
               

               
Cow position:
               
chr27:21418841-21419000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
561-708
               

               
Cow position:
               
chr27:20066139-20066281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
563-696
               

               
Cow position:
               
chr27:31372756-31372891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
563-700
               

               
Cow position:
               
chr27:20092396-20092533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
563-706
               

               
Cow position:
               
chr27:30551218-30551075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
563-708
               

               
Cow position:
               
chr27:6674458-6674312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
563-708
               

               
Cow position:
               
chr27:12429630-12429479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
95, 80
               

               
Conread position:
               
563-708
               

               
Cow position:
               
chr27:15866443-15866300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
563-708
               

               
Cow position:
               
chr27:22220776-22220626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
563-720
               

               
Cow position:
               
chr27:28164189-28164344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
563-737
               

               
Cow position:
               
chr27:26617584-26617411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 81
               

               
Conread position:
               
563-741
               

               
Cow position:
               
chr27:4962240-4962420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
564-708
               

               
Cow position:
               
chr27:1768414-1768551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
564-708
               

               
Cow position:
               
chr27:12516420-12516271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
564-708
               

               
Cow position:
               
chr27:18922671-18922527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 81
               

               
Conread position:
               
564-708
               

               
Cow position:
               
chr27:24445935-24446082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
564-708
               

               
Cow position:
               
chr27:30868519-30868666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
564-709
               

               
Cow position:
               
chr27:31147452-31147599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
564-720
               

               
Cow position:
               
chr27:28276494-28276334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
565-703
               

               
Cow position:
               
chr27:30177354-30177497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
565-706
               

               
Cow position:
               
chr27:18559004-18558861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 33
               

               
Conread position:
               
565-706
               

               
Cow position:
               
chr27:22293492-22293632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
565-707
               

               
Cow position:
               
chr27:24227573-24227715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 79
               

               
Conread position:
               
565-708
               

               
Cow position:
               
chr27:815585-815442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
565-708
               

               
Cow position:
               
chr27:15926992-15926848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
565-708
               

               
Cow position:
               
chr27:17473033-17472889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
565-708
               

               
Cow position:
               
chr27:25380211-25380069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
565-708
               

               
Cow position:
               
chr27:27141812-27141670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
565-708
               

               
Cow position:
               
chr27:27843772-27843920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
565-720
               

               
Cow position:
               
chr27:24014521-24014678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
93, 78
               

               
Conread position:
               
566-708
               

               
Cow position:
               
chr27:25783821-25783680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 123
               

               
Conread position:
               
566-743
               

               
Cow position:
               
chr27:16513663-16513843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 76
               

               
Conread position:
               
567-666
               

               
Cow position:
               
chr27:15342911-15343007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
567-703
               

               
Cow position:
               
chr27:4385847-4385981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
567-721
               

               
Cow position:
               
chr27:15858873-15859028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 76
               

               
Conread position:
               
568-708
               

               
Cow position:
               
chr27:12596973-12596841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
569-691
               

               
Cow position:
               
chr27:29515646-29515770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
569-696
               

               
Cow position:
               
chr27:23595489-23595361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
569-701
               

               
Cow position:
               
chr27:23452696-23452559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
569-702
               

               
Cow position:
               
chr27:29693919-29693786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
569-703
               

               
Cow position:
               
chr27:13252227-13252087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
569-703
               

               
Cow position:
               
chr27:22394388-22394249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
569-704
               

               
Cow position:
               
chr27:20369255-20369112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
569-705
               

               
Cow position:
               
chr27:7412599-7412458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
569-705
               

               
Cow position:
               
chr27:11412932-11412800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
569-705
               

               
Cow position:
               
chr27:27019884-27020023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
569-706
               

               
Cow position:
               
chr27:1353799-1353667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
569-706
               

               
Cow position:
               
chr27:27640776-27640917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
569-707
               

               
Cow position:
               
chr27:16787043-16786900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
569-707
               

               
Cow position:
               
chr27:22608920-22609063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:264467-264325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:491103-490964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:1058464-1058607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:2592757-2592625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:2930380-2930520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:4673237-4673095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:9090585-9090727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:9978043-9977904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:11815543-11815683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:14670166-14670308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:15200913-15200770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:15272122-15271987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:20796000-20795863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:21393288-21393425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:26427912-26428056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:26440842-26440984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:26508945-26509084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:28018553-28018410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 77
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:28518501-28518366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:30362459-30362319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
569-708
               

               
Cow position:
               
chr27:30890503-30890363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
569-712
               

               
Cow position:
               
chr27:10980080-10979932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
569-712
               

               
Cow position:
               
chr27:26785764-26785906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
569-718
               

               
Cow position:
               
chr27:28931571-28931725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
569-720
               

               
Cow position:
               
chr27:22418550-22418705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
569-720
               

               
Cow position:
               
chr27:23472474-23472314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
569-720
               

               
Cow position:
               
chr27:26643889-26643742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 83
               

               
Conread position:
               
569-720
               

               
Cow position:
               
chr27:26935702-26935856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
569-721
               

               
Cow position:
               
chr27:17645982-17646133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 128
               

               
Conread position:
               
569-721
               

               
Cow position:
               
chr27:22035157-22035316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
569-733
               

               
Cow position:
               
chr27:427341-427174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 74
               

               
Conread position:
               
569-736
               

               
Cow position:
               
chr27:16099803-16099974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 148
               

               
Conread position:
               
569-736
               

               
Cow position:
               
chr27:23502680-23502515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
569-743
               

               
Cow position:
               
chr27:30354129-30354302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
569-744
               

               
Cow position:
               
chr27:16823030-16822849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
569-744
               

               
Cow position:
               
chr27:24999518-24999696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
570-708
               

               
Cow position:
               
chr27:16871704-16871837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
571-708
               

               
Cow position:
               
chr27:4835393-4835535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 75
               

               
Conread position:
               
572-674
               

               
Cow position:
               
chr27:23917844-23917943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
572-686
               

               
Cow position:
               
chr27:17926424-17926538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
86, 71
               

               
Conread position:
               
572-689
               

               
Cow position:
               
chr27:707160-707046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
572-701
               

               
Cow position:
               
chr27:27455244-27455376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
572-703
               

               
Cow position:
               
chr27:16620204-16620069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
572-706
               

               
Cow position:
               
chr27:22498766-22498635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
572-706
               

               
Cow position:
               
chr27:27064227-27064365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
572-707
               

               
Cow position:
               
chr27:10307082-10307221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
572-707
               

               
Cow position:
               
chr27:14902436-14902574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
572-707
               

               
Cow position:
               
chr27:24331939-24331802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
572-707
               

               
Cow position:
               
chr27:26398046-26398182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:794995-794860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:1173330-1173472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:6058715-6058575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:11081409-11081273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:11255726-11255591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:11535884-11536024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 74
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:18507845-18507710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:20553930-20553796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:21350802-21350943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
21, 72
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:21408339-21408480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:21452857-21452997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:24321401-24321262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 29
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:24342117-24341975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:26406830-26406968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:27259821-27259685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:27528148-27528285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:28921683-28921822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
18, 117
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:29400030-29399892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
572-708
               

               
Cow position:
               
chr27:30476213-30476073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
572-711
               

               
Cow position:
               
chr27:22440355-22440210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
572-719
               

               
Cow position:
               
chr27:1903277-1903123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
572-720
               

               
Cow position:
               
chr27:19718133-19717984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
572-720
               

               
Cow position:
               
chr27:20765750-20765899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 72
               

               
Conread position:
               
572-720
               

               
Cow position:
               
chr27:20828494-20828649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
572-741
               

               
Cow position:
               
chr27:30185505-30185330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
573-744
               

               
Cow position:
               
chr27:11723692-11723866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
21, 141
               

               
Conread position:
               
574-707
               

               
Cow position:
               
chr27:19577885-19577751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
49, 45
               

               
Conread position:
               
574-708
               

               
Cow position:
               
chr27:27632398-27632534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
574-709
               

               
Cow position:
               
chr27:20641135-20641266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
575-704
               

               
Cow position:
               
chr27:2901031-2901162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
575-706
               

               
Cow position:
               
chr27:28038127-28038263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
575-707
               

               
Cow position:
               
chr27:13847849-13847716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
575-707
               

               
Cow position:
               
chr27:29799154-29799021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
575-707
               

               
Cow position:
               
chr27:30582948-30582817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
575-707
               

               
Cow position:
               
chr27:31230884-31231016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
83, 68
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:6523256-6523119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:6550661-6550533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:13317744-13317882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:15454423-15454287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 70
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:16284682-16284545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
83, 68
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:21668915-21669047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:22518838-22518705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
109, 67
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:22771968-22771830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 101
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:23070150-23070285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 113
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:23632810-23632674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:25411309-25411441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:25791014-25790880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:25809313-25809439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:26224059-26224196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:26864909-26865044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 68
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:27038634-27038763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:30374360-30374496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 72
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:30561122-30560989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
83, 73
               

               
Conread position:
               
575-708
               

               
Cow position:
               
chr27:30765242-30765114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
575-709
               

               
Cow position:
               
chr27:28207008-28206869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
575-718
               

               
Cow position:
               
chr27:16263539-16263406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
575-720
               

               
Cow position:
               
chr27:4719685-4719832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
575-720
               

               
Cow position:
               
chr27:22171508-22171364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
575-724
               

               
Cow position:
               
chr27:6541835-6541689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
576-707
               

               
Cow position:
               
chr27:13198125-13197990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 67
               

               
Conread position:
               
576-708
               

               
Cow position:
               
chr27:4812668-4812804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
576-708
               

               
Cow position:
               
chr27:4824912-4825037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
576-708
               

               
Cow position:
               
chr27:6074125-6073997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
576-708
               

               
Cow position:
               
chr27:6500274-6500137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
576-708
               

               
Cow position:
               
chr27:11762530-11762667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
576-708
               

               
Cow position:
               
chr27:15668558-15668694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 67
               

               
Conread position:
               
576-708
               

               
Cow position:
               
chr27:22179588-22179718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 68
               

               
Conread position:
               
576-708
               

               
Cow position:
               
chr27:23483432-23483301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
576-708
               

               
Cow position:
               
chr27:24559238-24559368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
576-708
               

               
Cow position:
               
chr27:26239233-26239101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
576-708
               

               
Cow position:
               
chr27:27449225-27449358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
576-709
               

               
Cow position:
               
chr27:29977467-29977321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
576-718
               

               
Cow position:
               
chr27:7958626-7958768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
576-744
               

               
Cow position:
               
chr27:7495466-7495292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
577-707
               

               
Cow position:
               
chr27:22426622-22426751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
577-708
               

               
Cow position:
               
chr27:29283203-29283332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
81, 6
               

               
Conread position:
               
577-709
               

               
Cow position:
               
chr27:299175-299312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
577-710
               

               
Cow position:
               
chr27:10275491-10275614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
577-721
               

               
Cow position:
               
chr27:30527374-30527234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 66
               

               
Conread position:
               
578-706
               

               
Cow position:
               
chr27:1498521-1498395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
578-708
               

               
Cow position:
               
chr27:18593475-18593343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
578-708
               

               
Cow position:
               
chr27:25277342-25277217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
579-708
               

               
Cow position:
               
chr27:18215262-18215128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
579-708
               

               
Cow position:
               
chr27:30605889-30605757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
20, 65
               

               
Conread position:
               
580-707
               

               
Cow position:
               
chr27:20354785-20354661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
581-705
               

               
Cow position:
               
chr27:29251084-29250955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
582-707
               

               
Cow position:
               
chr27:27055781-27055651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 61
               

               
Conread position:
               
582-707
               

               
Cow position:
               
chr27:28001616-28001732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
582-708
               

               
Cow position:
               
chr27:13875934-13875807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
582-708
               

               
Cow position:
               
chr27:19685511-19685635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
582-708
               

               
Cow position:
               
chr27:20869497-20869628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
582-708
               

               
Cow position:
               
chr27:26625329-26625202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
582-720
               

               
Cow position:
               
chr27:4829605-4829741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
585-708
               

               
Cow position:
               
chr27:28061562-28061688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
586-708
               

               
Cow position:
               
chr27:18030860-18030984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
586-708
               

               
Cow position:
               
chr27:21569644-21569765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
588-708
               

               
Cow position:
               
chr27:23554122-23554248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
590-721
               

               
Cow position:
               
chr27:23558191-23558328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
591-708
               

               
Cow position:
               
chr27:20036935-20037050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
592-706
               

               
Cow position:
               
chr27:11296450-11296332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
593-697
               

               
Cow position:
               
chr27:23736281-23736173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
593-708
               

               
Cow position:
               
chr27:16705438-16705323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
68, 52
               

               
Conread position:
               
594-708
               

               
Cow position:
               
chr27:20592174-20592060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
594-708
               

               
Cow position:
               
chr27:26151210-26151097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
595-708
               

               
Cow position:
               
chr27:68252-68366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
595-708
               

               
Cow position:
               
chr27:30670927-30670815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
595-726
               

               
Cow position:
               
chr27:18739577-18739445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
598-705
               

               
Cow position:
               
chr27:10992540-10992433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
613-708
               

               
Cow position:
               
chr27:15408872-15408967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
45, 30
               
Show alignments to all cow chromosomes.