Cow genome map

Conread name: Ss1.1-rret34_c10.5

Conread position: 528-744
Cow position: chr29:18085287-18085507 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 24

Conread position: 538-694
Cow position: chr29:2071862-2071705 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 36, 107

Conread position: 539-691
Cow position: chr29:25333744-25333590 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 19, 13

Conread position: 556-700
Cow position: chr29:26778610-26778759 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 88

Conread position: 556-708
Cow position: chr29:38760432-38760278 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 88

Conread position: 556-720
Cow position: chr29:732347-732511 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 53

Conread position: 559-694
Cow position: chr29:3822580-3822713 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 559-707
Cow position: chr29:34744887-34744739 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 33

Conread position: 560-706
Cow position: chr29:2415081-2414940 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 39

Conread position: 560-708
Cow position: chr29:13615913-13615765 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 60

Conread position: 560-744
Cow position: chr29:477837-478017 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 25

Conread position: 561-708
Cow position: chr29:15940907-15940754 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 563-706
Cow position: chr29:6635837-6635974 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 81

Conread position: 563-707
Cow position: chr29:16657422-16657566 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 39

Conread position: 563-707
Cow position: chr29:20674073-20673924 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 82

Conread position: 563-707
Cow position: chr29:35434601-35434752 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 563-708
Cow position: chr29:4625260-4625117 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 83

Conread position: 563-708
Cow position: chr29:19389219-19389363 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 80

Conread position: 563-708
Cow position: chr29:40891969-40891819 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 123
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 34, 83

Conread position: 563-718
Cow position: chr29:4120579-4120734 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 147, 76

Conread position: 564-707
Cow position: chr29:19762006-19762154 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 82

Conread position: 564-708
Cow position: chr29:29632203-29632054 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 83

Conread position: 564-708
Cow position: chr29:36530597-36530746 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 82

Conread position: 564-744
Cow position: chr29:26734767-26734947 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 34, 79

Conread position: 565-706
Cow position: chr29:44233214-44233073 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 79

Conread position: 565-708
Cow position: chr29:3704468-3704325 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 78

Conread position: 565-708
Cow position: chr29:4367456-4367599 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 78

Conread position: 565-708
Cow position: chr29:4875168-4875014 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 565-708
Cow position: chr29:16609473-16609620 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 66

Conread position: 565-708
Cow position: chr29:20933440-20933588 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 565-708
Cow position: chr29:26263590-26263727 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 24

Conread position: 566-704
Cow position: chr29:13372399-13372540 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 109

Conread position: 566-708
Cow position: chr29:4194385-4194241 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 131

Conread position: 566-726
Cow position: chr29:31928715-31928878 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 135
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 29, 55

Conread position: 566-736
Cow position: chr29:28674950-28674777 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 78

Conread position: 569-678
Cow position: chr29:18212243-18212133 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 99
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 89, 74

Conread position: 569-681
Cow position: chr29:4328173-4328284 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 47

Conread position: 569-683
Cow position: chr29:43516942-43516828 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 75

Conread position: 569-690
Cow position: chr29:21592443-21592560 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 65

Conread position: 569-693
Cow position: chr29:5948048-5947923 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 77

Conread position: 569-697
Cow position: chr29:19338718-19338851 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 27, 75

Conread position: 569-697
Cow position: chr29:26130522-26130655 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 75

Conread position: 569-706
Cow position: chr29:2263287-2263145 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 569-706
Cow position: chr29:7666290-7666154 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 24

Conread position: 569-706
Cow position: chr29:12005025-12004892 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 77

Conread position: 569-707
Cow position: chr29:15944308-15944448 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 75

Conread position: 569-707
Cow position: chr29:21000380-21000521 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 569-707
Cow position: chr29:28195780-28195636 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 121

Conread position: 569-707
Cow position: chr29:29974780-29974922 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 68

Conread position: 569-707
Cow position: chr29:32308585-32308445 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 76

Conread position: 569-707
Cow position: chr29:37785440-37785297 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 77

Conread position: 569-708
Cow position: chr29:87278-87139 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 89, 30

Conread position: 569-708
Cow position: chr29:133931-134076 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 569-708
Cow position: chr29:686452-686313 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 121
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 89, 76

Conread position: 569-708
Cow position: chr29:1556671-1556811 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 77

Conread position: 569-708
Cow position: chr29:6293728-6293597 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 569-708
Cow position: chr29:7408150-7408006 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 569-708
Cow position: chr29:14501333-14501473 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 30

Conread position: 569-708
Cow position: chr29:15738605-15738462 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 49

Conread position: 569-708
Cow position: chr29:20178386-20178247 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 40

Conread position: 569-708
Cow position: chr29:20626316-20626454 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 569-708
Cow position: chr29:24033535-24033680 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 569-708
Cow position: chr29:28775715-28775584 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 74

Conread position: 569-708
Cow position: chr29:29066165-29066305 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 75

Conread position: 569-708
Cow position: chr29:29589178-29589031 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 569-708
Cow position: chr29:30227403-30227546 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 78

Conread position: 569-708
Cow position: chr29:35281242-35281375 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 569-708
Cow position: chr29:35291838-35291969 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 75

Conread position: 569-708
Cow position: chr29:36216857-36216996 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 89, 74

Conread position: 569-708
Cow position: chr29:38581708-38581854 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 44

Conread position: 569-708
Cow position: chr29:39111569-39111436 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 74

Conread position: 569-708
Cow position: chr29:45005877-45005746 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 569-708
Cow position: chr29:45650603-45650465 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 45

Conread position: 569-709
Cow position: chr29:10296701-10296559 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 29, 75

Conread position: 569-709
Cow position: chr29:11684751-11684889 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 75

Conread position: 569-718
Cow position: chr29:1933819-1933668 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 25, 78

Conread position: 569-718
Cow position: chr29:18878762-18878610 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 78

Conread position: 569-718
Cow position: chr29:40096704-40096850 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 28

Conread position: 569-720
Cow position: chr29:9686262-9686109 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 129
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 77

Conread position: 569-720
Cow position: chr29:28868370-28868529 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 131
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 30, 80

Conread position: 569-720
Cow position: chr29:40165981-40166139 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 30, 75

Conread position: 569-720
Cow position: chr29:41811838-41811689 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 124
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 141, 74

Conread position: 569-721
Cow position: chr29:19756187-19756341 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 75

Conread position: 569-733
Cow position: chr29:30844499-30844660 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 77

Conread position: 569-743
Cow position: chr29:5919586-5919408 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 75

Conread position: 570-708
Cow position: chr29:585022-585157 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 73

Conread position: 570-708
Cow position: chr29:7956244-7956105 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 77

Conread position: 570-708
Cow position: chr29:16756795-16756937 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 571-706
Cow position: chr29:13458803-13458935 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 116
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 87, 18

Conread position: 571-708
Cow position: chr29:9139148-9139288 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 74

Conread position: 571-708
Cow position: chr29:24604407-24604268 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 71, 29

Conread position: 571-708
Cow position: chr29:35406052-35405915 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 8

Conread position: 572-670
Cow position: chr29:38731367-38731465 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 72

Conread position: 572-689
Cow position: chr29:21196908-21196791 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 74

Conread position: 572-695
Cow position: chr29:8164121-8163991 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 572-701
Cow position: chr29:23874198-23874331 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 75

Conread position: 572-701
Cow position: chr29:35501906-35501779 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 110
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 86, 71

Conread position: 572-703
Cow position: chr29:40117314-40117445 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 27

Conread position: 572-705
Cow position: chr29:22948920-22948783 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 572-705
Cow position: chr29:39567430-39567563 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 71

Conread position: 572-707
Cow position: chr29:2626180-2626049 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 572-707
Cow position: chr29:12451114-12451253 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 572-708
Cow position: chr29:109452-109586 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 86, 71

Conread position: 572-708
Cow position: chr29:3395852-3395985 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 75

Conread position: 572-708
Cow position: chr29:5046532-5046399 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 72

Conread position: 572-708
Cow position: chr29:6844887-6844752 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 71

Conread position: 572-708
Cow position: chr29:8125851-8125712 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 29

Conread position: 572-708
Cow position: chr29:16195594-16195728 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 71

Conread position: 572-708
Cow position: chr29:17543192-17543329 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 71

Conread position: 572-708
Cow position: chr29:19428410-19428537 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 572-708
Cow position: chr29:21933371-21933236 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 72

Conread position: 572-708
Cow position: chr29:24952428-24952567 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 119
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 42

Conread position: 572-708
Cow position: chr29:25088495-25088632 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 116
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 72

Conread position: 572-708
Cow position: chr29:26559778-26559646 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 72

Conread position: 572-708
Cow position: chr29:26771183-26771315 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 572-708
Cow position: chr29:31926548-31926411 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 27, 61

Conread position: 572-708
Cow position: chr29:32290344-32290481 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 72

Conread position: 572-708
Cow position: chr29:34297823-34297686 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 72

Conread position: 572-708
Cow position: chr29:37599462-37599329 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 86, 71

Conread position: 572-709
Cow position: chr29:32521611-32521752 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 71

Conread position: 572-711
Cow position: chr29:1582884-1582741 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 27, 36

Conread position: 572-720
Cow position: chr29:9709441-9709589 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 82, 71

Conread position: 572-720
Cow position: chr29:17109712-17109861 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 73

Conread position: 572-720
Cow position: chr29:28197266-28197112 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 71

Conread position: 572-721
Cow position: chr29:26017769-26017616 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 50

Conread position: 572-740
Cow position: chr29:21236858-21237028 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 24, 72

Conread position: 574-708
Cow position: chr29:356070-356204 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 70

Conread position: 574-708
Cow position: chr29:18695001-18695136 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 25, 69

Conread position: 574-708
Cow position: chr29:22339470-22339334 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 73

Conread position: 574-708
Cow position: chr29:26289342-26289208 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 71

Conread position: 575-664
Cow position: chr29:34745909-34745819 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 575-701
Cow position: chr29:35636169-35636298 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 74

Conread position: 575-702
Cow position: chr29:22175438-22175561 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 24

Conread position: 575-705
Cow position: chr29:41076283-41076147 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 19, 69

Conread position: 575-706
Cow position: chr29:8926714-8926577 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 575-706
Cow position: chr29:32963299-32963435 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 71

Conread position: 575-707
Cow position: chr29:29769601-29769473 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 111
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 69

Conread position: 575-707
Cow position: chr29:35738525-35738388 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 575-708
Cow position: chr29:17360-17225 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 575-708
Cow position: chr29:465657-465518 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 575-708
Cow position: chr29:961664-961801 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 69

Conread position: 575-708
Cow position: chr29:1307119-1306985 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 44

Conread position: 575-708
Cow position: chr29:2984632-2984763 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 83, 24

Conread position: 575-708
Cow position: chr29:4480427-4480293 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 27

Conread position: 575-708
Cow position: chr29:5062877-5063007 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 68

Conread position: 575-708
Cow position: chr29:7041090-7040957 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 57

Conread position: 575-708
Cow position: chr29:9911922-9912051 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 71

Conread position: 575-708
Cow position: chr29:10456807-10456680 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 70

Conread position: 575-708
Cow position: chr29:12784210-12784078 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 69

Conread position: 575-708
Cow position: chr29:18748839-18748704 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 70, 24

Conread position: 575-708
Cow position: chr29:21265480-21265613 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 67

Conread position: 575-708
Cow position: chr29:21665715-21665849 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 114
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 69

Conread position: 575-708
Cow position: chr29:34360049-34359923 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 56

Conread position: 575-708
Cow position: chr29:40894684-40894813 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 575-708
Cow position: chr29:40902974-40902841 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 29

Conread position: 575-708
Cow position: chr29:43252942-43252808 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 68

Conread position: 575-708
Cow position: chr29:45588728-45588594 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 117
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 19, 71

Conread position: 575-709
Cow position: chr29:1325186-1325321 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 69, 33

Conread position: 575-712
Cow position: chr29:2644560-2644422 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 24

Conread position: 575-718
Cow position: chr29:32799958-32799824 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 69

Conread position: 575-720
Cow position: chr29:22162508-22162360 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 71

Conread position: 575-723
Cow position: chr29:26129244-26129394 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 138

Conread position: 575-741
Cow position: chr29:42205252-42205425 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 575-744
Cow position: chr29:44236213-44236389 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 79, 24

Conread position: 576-687
Cow position: chr29:31594369-31594258 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 68

Conread position: 576-708
Cow position: chr29:13553878-13554013 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 67

Conread position: 576-708
Cow position: chr29:26329964-26330088 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 576-720
Cow position: chr29:3502807-3502945 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 24

Conread position: 576-720
Cow position: chr29:12679901-12680051 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 577-707
Cow position: chr29:21443597-21443466 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 69

Conread position: 577-708
Cow position: chr29:2188590-2188461 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 70

Conread position: 577-708
Cow position: chr29:2744525-2744393 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 70

Conread position: 577-708
Cow position: chr29:5099015-5098881 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 67

Conread position: 577-708
Cow position: chr29:5892594-5892727 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 68, 123

Conread position: 577-708
Cow position: chr29:6217801-6217670 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 106

Conread position: 577-708
Cow position: chr29:24345717-24345571 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 577-710
Cow position: chr29:6014850-6014982 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 47

Conread position: 577-743
Cow position: chr29:9638565-9638403 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 71

Conread position: 578-708
Cow position: chr29:22720876-22721009 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 117
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 47

Conread position: 578-708
Cow position: chr29:26137533-26137668 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 69

Conread position: 578-720
Cow position: chr29:4065834-4065979 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 48

Conread position: 579-708
Cow position: chr29:11562363-11562494 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 63

Conread position: 580-705
Cow position: chr29:11915567-11915696 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 7

Conread position: 580-708
Cow position: chr29:18735893-18735761 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 64

Conread position: 581-697
Cow position: chr29:707194-707082 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 18, 44

Conread position: 582-706
Cow position: chr29:23984212-23984082 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 63

Conread position: 582-707
Cow position: chr29:23578023-23577898 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 5

Conread position: 582-708
Cow position: chr29:37961224-37961099 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 5

Conread position: 582-718
Cow position: chr29:41747193-41747325 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 5

Conread position: 583-708
Cow position: chr29:26615972-26615843 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 59

Conread position: 585-707
Cow position: chr29:20903533-20903406 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 59

Conread position: 585-708
Cow position: chr29:25737662-25737539 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 63

Conread position: 587-700
Cow position: chr29:36183033-36183146 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 54

Conread position: 587-708
Cow position: chr29:36586335-36586458 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 57

Conread position: 588-708
Cow position: chr29:25474665-25474790 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 58

Conread position: 590-718
Cow position: chr29:19949070-19949200 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 56

Conread position: 593-708
Cow position: chr29:16309514-16309621 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 593-708
Cow position: chr29:16735242-16735123 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 50

Conread position: 593-720
Cow position: chr29:4520099-4520228 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 111
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 65, 50

Conread position: 593-721
Cow position: chr29:22714964-22714830 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 50

Conread position: 594-708
Cow position: chr29:6286393-6286280 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 49

Conread position: 594-720
Cow position: chr29:24103784-24103652 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 49

Conread position: 595-708
Cow position: chr29:23844597-23844714 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 51

Conread position: 599-708
Cow position: chr29:39642946-39643054 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 44

Show alignments to all cow chromosomes.