Cow genome map
| Conread name: | Ss1.1-rret36_f12.5 |
| Conread position: | 1-179 |
| Cow position: | chr20:14643243-14643065 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-658 |
| Cow position: | chr20:5921321-5921848 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 78 |
| Conread position: | 178-326 |
| Cow position: | chr20:14641940-14641792 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 139 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 324-429 |
| Cow position: | chr20:14638836-14638731 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 418-768 |
| Cow position: | chr20:14638663-14638313 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 641-1031 |
| Cow position: | chr20:5922514-5922885 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 132, 96 |
| Conread position: | 766-927 |
| Cow position: | chr20:14638058-14637897 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 926-1046 |
| Cow position: | chr20:14635661-14635541 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 118 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1044-1197 |
| Cow position: | chr20:14634947-14634794 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 147 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1197-1319 |
| Cow position: | chr20:14634707-14634585 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 119 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1380-1627 |
| Cow position: | chr20:14632685-14632437 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 0 |
| Conread position: | 1447-1688 |
| Cow position: | chr20:5920824-5920591 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1600-2016 |
| Cow position: | chr20:14632004-14631597 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 108 |
| Conread position: | 2017-2664 |
| Cow position: | chr20:14632048-14631411 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 625 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 150 |
Show alignments to all cow chromosomes.