• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-rsag038_l19.5
        

               
Conread position:
               
1-445
               

               
Cow position:
               
chr16:20634196-20633738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
97, 17
               

               
Conread position:
               
24-422
               

               
Cow position:
               
chr16:5845374-5845785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
35-459
               

               
Cow position:
               
chr16:14106361-14106786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
62-420
               

               
Cow position:
               
chr16:37669992-37669623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
62-449
               

               
Cow position:
               
chr16:16548351-16548756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 40
               

               
Conread position:
               
62-449
               

               
Cow position:
               
chr16:22842317-22841917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
66-488
               

               
Cow position:
               
chr16:45534924-45535357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
67-425
               

               
Cow position:
               
chr16:15824697-15824325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
201, 94
               

               
Conread position:
               
68-433
               

               
Cow position:
               
chr16:52636639-52636256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
71-425
               

               
Cow position:
               
chr16:5896168-5896537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
133, 191
               

               
Conread position:
               
74-440
               

               
Cow position:
               
chr16:56082610-56082229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
75-417
               

               
Cow position:
               
chr16:23871899-23871539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
75-444
               

               
Cow position:
               
chr16:7152423-7152035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
75-451
               

               
Cow position:
               
chr16:11422064-11422447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
75-496
               

               
Cow position:
               
chr16:49230015-49229585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
96, 81
               

               
Conread position:
               
77-341
               

               
Cow position:
               
chr16:29399748-29400015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 135
               

               
Conread position:
               
79-442
               

               
Cow position:
               
chr16:35623488-35623117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
78, 132
               

               
Conread position:
               
81-425
               

               
Cow position:
               
chr16:54665044-54664680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
80, 114
               

               
Conread position:
               
81-458
               

               
Cow position:
               
chr16:43105753-43105361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
168, 15
               

               
Conread position:
               
82-255
               

               
Cow position:
               
chr16:14360864-14361032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
82-259
               

               
Cow position:
               
chr16:4144824-4144994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
82-353
               

               
Cow position:
               
chr16:17665393-17665670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 92
               

               
Conread position:
               
82-431
               

               
Cow position:
               
chr16:4626636-4626268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 121
               

               
Conread position:
               
83-267
               

               
Cow position:
               
chr16:5726687-5726864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
165, 61
               

               
Conread position:
               
83-439
               

               
Cow position:
               
chr16:42079081-42078716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
89, 148
               

               
Conread position:
               
83-454
               

               
Cow position:
               
chr16:37062634-37062250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
152, 115
               

               
Conread position:
               
83-503
               

               
Cow position:
               
chr16:13611687-13611257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
165, 10
               

               
Conread position:
               
84-392
               

               
Cow position:
               
chr16:39514317-39513990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
85-205
               

               
Cow position:
               
chr16:52802403-52802527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
85-205
               

               
Cow position:
               
chr16:54227963-54227841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
85-227
               

               
Cow position:
               
chr16:11100034-11099897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
85-259
               

               
Cow position:
               
chr16:7542052-7542216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
85-260
               

               
Cow position:
               
chr16:52789824-52789992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
163, 76
               

               
Conread position:
               
85-267
               

               
Cow position:
               
chr16:45046391-45046563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
85-367
               

               
Cow position:
               
chr16:24228587-24228297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
175, 122
               

               
Conread position:
               
85-418
               

               
Cow position:
               
chr16:45703213-45702860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
85-422
               

               
Cow position:
               
chr16:13698271-13698631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
85-425
               

               
Cow position:
               
chr16:3614511-3614860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
163, 92
               

               
Conread position:
               
85-443
               

               
Cow position:
               
chr16:2223644-2223262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
85-446
               

               
Cow position:
               
chr16:18205734-18206096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
163, 74
               

               
Conread position:
               
85-451
               

               
Cow position:
               
chr16:4059122-4059498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
170, 76
               

               
Conread position:
               
85-492
               

               
Cow position:
               
chr16:16096500-16096925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
163, 64
               

               
Conread position:
               
86-194
               

               
Cow position:
               
chr16:33458240-33458128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
86-194
               

               
Cow position:
               
chr16:47852855-47852747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
106, 69
               

               
Conread position:
               
86-195
               

               
Cow position:
               
chr16:33405993-33405884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
86-197
               

               
Cow position:
               
chr16:8796463-8796352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
86-199
               

               
Cow position:
               
chr16:16932762-16932873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
86-200
               

               
Cow position:
               
chr16:11274673-11274789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
86-200
               

               
Cow position:
               
chr16:15320705-15320588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
86-200
               

               
Cow position:
               
chr16:33777583-33777696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
86-205
               

               
Cow position:
               
chr16:7619432-7619314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
86-245
               

               
Cow position:
               
chr16:30311345-30311194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
86-250
               

               
Cow position:
               
chr16:56846133-56845973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 123
               

               
Conread position:
               
86-259
               

               
Cow position:
               
chr16:8522623-8522463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
86-261
               

               
Cow position:
               
chr16:47336494-47336663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
86-262
               

               
Cow position:
               
chr16:6692849-6692669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
86-262
               

               
Cow position:
               
chr16:47662477-47662646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
86-266
               

               
Cow position:
               
chr16:13791277-13791454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 124
               

               
Conread position:
               
86-267
               

               
Cow position:
               
chr16:902123-901941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 125
               

               
Conread position:
               
86-267
               

               
Cow position:
               
chr16:7997848-7997678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
86-267
               

               
Cow position:
               
chr16:15255187-15255009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
118, 57
               

               
Conread position:
               
86-267
               

               
Cow position:
               
chr16:29066932-29067104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
86-267
               

               
Cow position:
               
chr16:33751962-33752138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
86-267
               

               
Cow position:
               
chr16:47620144-47620322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 116
               

               
Conread position:
               
86-270
               

               
Cow position:
               
chr16:42777727-42777908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 120
               

               
Conread position:
               
86-270
               

               
Cow position:
               
chr16:49141794-49141620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
150, 66
               

               
Conread position:
               
86-319
               

               
Cow position:
               
chr16:43804261-43804499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
162, 120
               

               
Conread position:
               
86-329
               

               
Cow position:
               
chr16:44973260-44973510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
162, 44
               

               
Conread position:
               
86-330
               

               
Cow position:
               
chr16:8807326-8807076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
164, 64
               

               
Conread position:
               
86-330
               

               
Cow position:
               
chr16:41037448-41037707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
86-346
               

               
Cow position:
               
chr16:4712665-4712935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
153, 84
               

               
Conread position:
               
86-376
               

               
Cow position:
               
chr16:7456701-7456392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
60, 126
               

               
Conread position:
               
86-376
               

               
Cow position:
               
chr16:8280025-8279722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 100
               

               
Conread position:
               
86-376
               

               
Cow position:
               
chr16:9932921-9933228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
86-383
               

               
Cow position:
               
chr16:4972261-4971950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
86-384
               

               
Cow position:
               
chr16:29557867-29557553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
86-389
               

               
Cow position:
               
chr16:54578931-54579249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 89
               

               
Conread position:
               
86-397
               

               
Cow position:
               
chr16:11775286-11774957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
163, 121
               

               
Conread position:
               
86-400
               

               
Cow position:
               
chr16:4699206-4698894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
162, 70
               

               
Conread position:
               
86-400
               

               
Cow position:
               
chr16:52889646-52889317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
73, 122
               

               
Conread position:
               
86-408
               

               
Cow position:
               
chr16:5636356-5636686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
146, 73
               

               
Conread position:
               
86-408
               

               
Cow position:
               
chr16:11103061-11102719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 122
               

               
Conread position:
               
86-408
               

               
Cow position:
               
chr16:43506034-43505709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
183, 121
               

               
Conread position:
               
86-417
               

               
Cow position:
               
chr16:19408748-19408417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
227, 68
               

               
Conread position:
               
86-417
               

               
Cow position:
               
chr16:56831976-56831631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
86-420
               

               
Cow position:
               
chr16:1549114-1548764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
76, 121
               

               
Conread position:
               
86-420
               

               
Cow position:
               
chr16:23563901-23564246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
154, 84
               

               
Conread position:
               
86-420
               

               
Cow position:
               
chr16:30096366-30096020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
162, 121
               

               
Conread position:
               
86-422
               

               
Cow position:
               
chr16:8438861-8438535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
179, 27
               

               
Conread position:
               
86-423
               

               
Cow position:
               
chr16:3633879-3634233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 72
               

               
Conread position:
               
86-424
               

               
Cow position:
               
chr16:28191831-28192172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 119
               

               
Conread position:
               
86-424
               

               
Cow position:
               
chr16:37452850-37452496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
162, 36
               

               
Conread position:
               
86-424
               

               
Cow position:
               
chr16:38709062-38708717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
186, 25
               

               
Conread position:
               
86-424
               

               
Cow position:
               
chr16:40333561-40333208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
71, 125
               

               
Conread position:
               
86-424
               

               
Cow position:
               
chr16:48006727-48006375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
86-424
               

               
Cow position:
               
chr16:49169619-49169263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
150, 72
               

               
Conread position:
               
86-425
               

               
Cow position:
               
chr16:238025-238386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 178
               

               
Conread position:
               
86-425
               

               
Cow position:
               
chr16:820015-820373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
163, 89
               

               
Conread position:
               
86-425
               

               
Cow position:
               
chr16:9973738-9973380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 120
               

               
Conread position:
               
86-425
               

               
Cow position:
               
chr16:23681136-23681481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
143, 78
               

               
Conread position:
               
86-425
               

               
Cow position:
               
chr16:29655090-29655444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
86-426
               

               
Cow position:
               
chr16:42339969-42340316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
86-427
               

               
Cow position:
               
chr16:48145635-48145282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
86-432
               

               
Cow position:
               
chr16:4399486-4399862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
86-433
               

               
Cow position:
               
chr16:23472515-23472877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
162, 75
               

               
Conread position:
               
86-441
               

               
Cow position:
               
chr16:14242140-14242502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
147, 75
               

               
Conread position:
               
86-443
               

               
Cow position:
               
chr16:47510204-47509856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
75, 100
               

               
Conread position:
               
86-444
               

               
Cow position:
               
chr16:8193208-8193594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 126
               

               
Conread position:
               
86-444
               

               
Cow position:
               
chr16:10032390-10032776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
86-444
               

               
Cow position:
               
chr16:13307099-13306736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
86-444
               

               
Cow position:
               
chr16:40561991-40562372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
77, 177
               

               
Conread position:
               
86-444
               

               
Cow position:
               
chr16:50282667-50282292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
128, 58
               

               
Conread position:
               
86-449
               

               
Cow position:
               
chr16:38905462-38905090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
167, 89
               

               
Conread position:
               
86-450
               

               
Cow position:
               
chr16:26373187-26372807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
51, 55
               

               
Conread position:
               
86-451
               

               
Cow position:
               
chr16:56875889-56875521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 125
               

               
Conread position:
               
86-453
               

               
Cow position:
               
chr16:17745599-17745981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
162, 117
               

               
Conread position:
               
86-454
               

               
Cow position:
               
chr16:19670568-19670205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
86-474
               

               
Cow position:
               
chr16:16265335-16264937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
86-476
               

               
Cow position:
               
chr16:28833606-28834016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
115, 52
               

               
Conread position:
               
86-485
               

               
Cow position:
               
chr16:33507827-33508229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
66, 123
               

               
Conread position:
               
86-496
               

               
Cow position:
               
chr16:13969615-13969180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
148, 84
               

               
Conread position:
               
86-497
               

               
Cow position:
               
chr16:5415989-5415571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
162, 60
               

               
Conread position:
               
86-578
               

               
Cow position:
               
chr16:20025208-20025728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
86-599
               

               
Cow position:
               
chr16:15370443-15370977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
162, 121
               

               
Conread position:
               
87-191
               

               
Cow position:
               
chr16:24147919-24148027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
87-200
               

               
Cow position:
               
chr16:18678962-18679075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
87-200
               

               
Cow position:
               
chr16:39385166-39385286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
87-200
               

               
Cow position:
               
chr16:45173785-45173668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
87-200
               

               
Cow position:
               
chr16:51710363-51710250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
87-205
               

               
Cow position:
               
chr16:14721978-14721863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
87-205
               

               
Cow position:
               
chr16:16177583-16177701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
87-205
               

               
Cow position:
               
chr16:51578655-51578533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
87-250
               

               
Cow position:
               
chr16:4134631-4134793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
87-250
               

               
Cow position:
               
chr16:26500926-26501077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
87-253
               

               
Cow position:
               
chr16:8325685-8325519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
87-255
               

               
Cow position:
               
chr16:31978423-31978259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
79, 121
               

               
Conread position:
               
87-255
               

               
Cow position:
               
chr16:43152940-43152781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
87-256
               

               
Cow position:
               
chr16:5293427-5293590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
76, 117
               

               
Conread position:
               
87-257
               

               
Cow position:
               
chr16:15726597-15726440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
87-259
               

               
Cow position:
               
chr16:5363657-5363825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 115
               

               
Conread position:
               
87-259
               

               
Cow position:
               
chr16:7082968-7082804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
87-259
               

               
Cow position:
               
chr16:37116839-37117003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
87-259
               

               
Cow position:
               
chr16:42633983-42633821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
87-261
               

               
Cow position:
               
chr16:42970166-42969992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
76, 123
               

               
Conread position:
               
87-262
               

               
Cow position:
               
chr16:30715257-30715428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 119
               

               
Conread position:
               
87-263
               

               
Cow position:
               
chr16:53613063-53613237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 137
               

               
Conread position:
               
87-266
               

               
Cow position:
               
chr16:33299156-33299336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 122
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr16:9790866-9790689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr16:26610398-26610580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
68, 125
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr16:30939498-30939676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
145, 119
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr16:32327417-32327592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
159, 114
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr16:46434351-46434175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
157, 16
               

               
Conread position:
               
87-270
               

               
Cow position:
               
chr16:11568345-11568176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
87-291
               

               
Cow position:
               
chr16:14441655-14441857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 146
               

               
Conread position:
               
87-296
               

               
Cow position:
               
chr16:24403495-24403708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
87-327
               

               
Cow position:
               
chr16:4103392-4103148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
159, 37
               

               
Conread position:
               
87-327
               

               
Cow position:
               
chr16:51399981-51399737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 116
               

               
Conread position:
               
87-337
               

               
Cow position:
               
chr16:22868410-22868154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
161, 120
               

               
Conread position:
               
87-342
               

               
Cow position:
               
chr16:4372731-4372464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
87-373
               

               
Cow position:
               
chr16:34168360-34168653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
176, 120
               

               
Conread position:
               
87-380
               

               
Cow position:
               
chr16:8367059-8366757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
70, 115
               

               
Conread position:
               
87-384
               

               
Cow position:
               
chr16:13752359-13752054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
87-387
               

               
Cow position:
               
chr16:24672595-24672279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
87-388
               

               
Cow position:
               
chr16:30143448-30143118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
68, 124
               

               
Conread position:
               
87-388
               

               
Cow position:
               
chr16:35343710-35343391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
87-389
               

               
Cow position:
               
chr16:5654273-5654582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
87-390
               

               
Cow position:
               
chr16:600710-601029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
87-390
               

               
Cow position:
               
chr16:9728969-9729279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 102
               

               
Conread position:
               
87-390
               

               
Cow position:
               
chr16:30290081-30290392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
50, 121
               

               
Conread position:
               
87-390
               

               
Cow position:
               
chr16:35195846-35195529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
61, 126
               

               
Conread position:
               
87-390
               

               
Cow position:
               
chr16:46176274-46175968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
156, 45
               

               
Conread position:
               
87-390
               

               
Cow position:
               
chr16:53553952-53553635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 124
               

               
Conread position:
               
87-392
               

               
Cow position:
               
chr16:16597327-16597643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
87-397
               

               
Cow position:
               
chr16:42217925-42217599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
87-398
               

               
Cow position:
               
chr16:23483053-23483374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
70, 105
               

               
Conread position:
               
87-398
               

               
Cow position:
               
chr16:33588433-33588750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
161, 120
               

               
Conread position:
               
87-398
               

               
Cow position:
               
chr16:38903669-38903366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
230, 50
               

               
Conread position:
               
87-408
               

               
Cow position:
               
chr16:11615463-11615143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
161, 69
               

               
Conread position:
               
87-412
               

               
Cow position:
               
chr16:23737948-23738287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
161, 68
               

               
Conread position:
               
87-417
               

               
Cow position:
               
chr16:571152-570807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 119
               

               
Conread position:
               
87-420
               

               
Cow position:
               
chr16:42242353-42242004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
87-422
               

               
Cow position:
               
chr16:7429143-7429496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
161, 39
               

               
Conread position:
               
87-422
               

               
Cow position:
               
chr16:29158896-29159236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
87-422
               

               
Cow position:
               
chr16:35757978-35758317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
165, 43
               

               
Conread position:
               
87-422
               

               
Cow position:
               
chr16:39165010-39165355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
161, 64
               

               
Conread position:
               
87-423
               

               
Cow position:
               
chr16:38663947-38663594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
87-423
               

               
Cow position:
               
chr16:39616508-39616839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
151, 115
               

               
Conread position:
               
87-424
               

               
Cow position:
               
chr16:21450613-21450965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
161, 47
               

               
Conread position:
               
87-424
               

               
Cow position:
               
chr16:32132293-32132625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 51
               

               
Conread position:
               
87-424
               

               
Cow position:
               
chr16:33235371-33235044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 120
               

               
Conread position:
               
87-425
               

               
Cow position:
               
chr16:4910766-4910406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
161, 114
               

               
Conread position:
               
87-425
               

               
Cow position:
               
chr16:30037229-30036873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 24
               

               
Conread position:
               
87-425
               

               
Cow position:
               
chr16:35188019-35188368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
161, 121
               

               
Conread position:
               
87-425
               

               
Cow position:
               
chr16:51113112-51112761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
161, 120
               

               
Conread position:
               
87-426
               

               
Cow position:
               
chr16:30909166-30908826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 161
               

               
Conread position:
               
87-426
               

               
Cow position:
               
chr16:46452994-46452623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
95, 163
               

               
Conread position:
               
87-431
               

               
Cow position:
               
chr16:20476301-20476660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
161, 102
               

               
Conread position:
               
87-433
               

               
Cow position:
               
chr16:8026080-8025728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
161, 110
               

               
Conread position:
               
87-435
               

               
Cow position:
               
chr16:14754557-14754193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
161, 115
               

               
Conread position:
               
87-435
               

               
Cow position:
               
chr16:49126419-49126057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
117, 73
               

               
Conread position:
               
87-436
               

               
Cow position:
               
chr16:29766108-29766455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
87-440
               

               
Cow position:
               
chr16:29380019-29380384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
161, 120
               

               
Conread position:
               
87-441
               

               
Cow position:
               
chr16:7702296-7702654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
65, 119
               

               
Conread position:
               
87-443
               

               
Cow position:
               
chr16:4857325-4856967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
201, 89
               

               
Conread position:
               
87-443
               

               
Cow position:
               
chr16:7665396-7665772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
87-443
               

               
Cow position:
               
chr16:10040073-10039712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
185, 83
               

               
Conread position:
               
87-443
               

               
Cow position:
               
chr16:17142698-17143070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
87-443
               

               
Cow position:
               
chr16:22850093-22850460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
110, 138
               

               
Conread position:
               
87-443
               

               
Cow position:
               
chr16:44744367-44743998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
159, 50
               

               
Conread position:
               
87-443
               

               
Cow position:
               
chr16:53086560-53086203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 69
               

               
Conread position:
               
87-443
               

               
Cow position:
               
chr16:55042799-55042433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr16:2750756-2751110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
63, 115
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr16:39279313-39278932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 362
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr16:51598838-51598479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
117, 74
               

               
Conread position:
               
87-447
               

               
Cow position:
               
chr16:4192655-4192293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
87-447
               

               
Cow position:
               
chr16:49125756-49125386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
161, 28
               

               
Conread position:
               
87-452
               

               
Cow position:
               
chr16:33054699-33054337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
199, 77
               

               
Conread position:
               
87-453
               

               
Cow position:
               
chr16:15960530-15960143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 181
               

               
Conread position:
               
87-459
               

               
Cow position:
               
chr16:53813894-53813502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
161, 120
               

               
Conread position:
               
87-460
               

               
Cow position:
               
chr16:18354187-18353803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 120
               

               
Conread position:
               
87-467
               

               
Cow position:
               
chr16:41590544-41590925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
115, 74
               

               
Conread position:
               
87-485
               

               
Cow position:
               
chr16:53509224-53508808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
87-511
               

               
Cow position:
               
chr16:48385637-48385194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
77, 102
               

               
Conread position:
               
87-577
               

               
Cow position:
               
chr16:7498833-7499302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
162, 74
               

               
Conread position:
               
87-578
               

               
Cow position:
               
chr16:11790778-11791287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 119
               

               
Conread position:
               
87-596
               

               
Cow position:
               
chr16:39646324-39646831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
88-240
               

               
Cow position:
               
chr16:8706785-8706637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
88-247
               

               
Cow position:
               
chr16:594465-594309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
19, 121
               

               
Conread position:
               
88-250
               

               
Cow position:
               
chr16:16231848-16232007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
88-259
               

               
Cow position:
               
chr16:590143-589987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
88-259
               

               
Cow position:
               
chr16:44138774-44138607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
159, 23
               

               
Conread position:
               
88-342
               

               
Cow position:
               
chr16:11619520-11619778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
158, 70
               

               
Conread position:
               
88-367
               

               
Cow position:
               
chr16:29823160-29822875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 82
               

               
Conread position:
               
88-390
               

               
Cow position:
               
chr16:3333192-3333481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
229, 40
               

               
Conread position:
               
88-390
               

               
Cow position:
               
chr16:39695711-39695399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
69, 123
               

               
Conread position:
               
88-397
               

               
Cow position:
               
chr16:53892015-53891696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
160, 111
               

               
Conread position:
               
88-425
               

               
Cow position:
               
chr16:8933654-8933309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 50
               

               
Conread position:
               
88-427
               

               
Cow position:
               
chr16:48087105-48086749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
177, 106
               

               
Conread position:
               
88-434
               

               
Cow position:
               
chr16:19003753-19003403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
88-441
               

               
Cow position:
               
chr16:14568719-14568353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 123
               

               
Conread position:
               
88-443
               

               
Cow position:
               
chr16:28694504-28694864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
88-444
               

               
Cow position:
               
chr16:49216197-49215870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
178, 59
               

               
Conread position:
               
88-459
               

               
Cow position:
               
chr16:43275788-43276172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
161, 113
               

               
Conread position:
               
88-490
               

               
Cow position:
               
chr16:25484133-25484515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
56, 95
               

               
Conread position:
               
88-511
               

               
Cow position:
               
chr16:22804816-22804387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 73
               

               
Conread position:
               
88-543
               

               
Cow position:
               
chr16:6379344-6378891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
67, 114
               

               
Conread position:
               
89-250
               

               
Cow position:
               
chr16:37380038-37380189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
89-267
               

               
Cow position:
               
chr16:4277947-4277776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
89-366
               

               
Cow position:
               
chr16:18719173-18718887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 122
               

               
Conread position:
               
89-373
               

               
Cow position:
               
chr16:11425373-11425089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
89-383
               

               
Cow position:
               
chr16:41752806-41752500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 114
               

               
Conread position:
               
89-390
               

               
Cow position:
               
chr16:675261-675574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 6
               

               
Conread position:
               
89-390
               

               
Cow position:
               
chr16:46521669-46521972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
186, 76
               

               
Conread position:
               
89-420
               

               
Cow position:
               
chr16:13195566-13195225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
159, 70
               

               
Conread position:
               
89-424
               

               
Cow position:
               
chr16:21904930-21905264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
89-425
               

               
Cow position:
               
chr16:26676923-26676567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 119
               

               
Conread position:
               
89-426
               

               
Cow position:
               
chr16:10148048-10148402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
159, 67
               

               
Conread position:
               
89-443
               

               
Cow position:
               
chr16:8840659-8841025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 119
               

               
Conread position:
               
89-445
               

               
Cow position:
               
chr16:39394343-39394706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 110
               

               
Conread position:
               
90-259
               

               
Cow position:
               
chr16:42253806-42253636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 123
               

               
Conread position:
               
90-330
               

               
Cow position:
               
chr16:47017477-47017243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 113
               

               
Conread position:
               
90-342
               

               
Cow position:
               
chr16:26342045-26342295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
156, 60
               

               
Conread position:
               
90-346
               

               
Cow position:
               
chr16:13973514-13973252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
90-385
               

               
Cow position:
               
chr16:33791076-33790759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 190
               

               
Conread position:
               
90-390
               

               
Cow position:
               
chr16:2396095-2396398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
90-421
               

               
Cow position:
               
chr16:24825838-24826188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 114
               

               
Conread position:
               
90-430
               

               
Cow position:
               
chr16:23730171-23729792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
90-430
               

               
Cow position:
               
chr16:33645782-33646139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
79, 113
               

               
Conread position:
               
90-499
               

               
Cow position:
               
chr16:53627655-53627234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
158, 66
               

               
Conread position:
               
91-190
               

               
Cow position:
               
chr16:12106433-12106532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
91-383
               

               
Cow position:
               
chr16:16402558-16402250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 111
               

               
Conread position:
               
91-443
               

               
Cow position:
               
chr16:23823250-23822896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
198, 116
               

               
Conread position:
               
91-516
               

               
Cow position:
               
chr16:32302218-32301794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
164, 63
               

               
Conread position:
               
92-384
               

               
Cow position:
               
chr16:48191232-48190934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 116
               

               
Conread position:
               
92-435
               

               
Cow position:
               
chr16:28112151-28111809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
156, 128
               

               
Conread position:
               
93-266
               

               
Cow position:
               
chr16:15504755-15504579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 118
               

               
Conread position:
               
93-332
               

               
Cow position:
               
chr16:16424833-16424591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
81, 68
               

               
Conread position:
               
93-382
               

               
Cow position:
               
chr16:43324142-43323855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 118
               

               
Conread position:
               
93-579
               

               
Cow position:
               
chr16:11105319-11105818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
94-377
               

               
Cow position:
               
chr16:27249181-27249467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
94-425
               

               
Cow position:
               
chr16:50288929-50289269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
92, 66
               

               
Conread position:
               
94-443
               

               
Cow position:
               
chr16:18758072-18757702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 105
               

               
Conread position:
               
97-247
               

               
Cow position:
               
chr16:31159803-31159654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
97-390
               

               
Cow position:
               
chr16:5352056-5351758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
183, 30
               

               
Conread position:
               
97-417
               

               
Cow position:
               
chr16:12361197-12360862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
151, 71
               

               
Conread position:
               
97-437
               

               
Cow position:
               
chr16:48370173-48369820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 162
               

               
Conread position:
               
97-444
               

               
Cow position:
               
chr16:43308794-43308425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
62, 114
               

               
Conread position:
               
98-425
               

               
Cow position:
               
chr16:22772744-22773097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
104, 348
               

               
Conread position:
               
101-245
               

               
Cow position:
               
chr16:8481312-8481172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 99
               

               
Conread position:
               
102-434
               

               
Cow position:
               
chr16:13713134-13712806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
106-243
               

               
Cow position:
               
chr16:30705890-30706024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
106-266
               

               
Cow position:
               
chr16:4503064-4503223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
142, 94
               

               
Conread position:
               
106-392
               

               
Cow position:
               
chr16:45677068-45676777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
171, 96
               

               
Conread position:
               
108-451
               

               
Cow position:
               
chr16:14758516-14758878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
109-459
               

               
Cow position:
               
chr16:42443940-42444302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 9
               

               
Conread position:
               
110-425
               

               
Cow position:
               
chr16:8069030-8068705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
112-443
               

               
Cow position:
               
chr16:8066091-8065753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
152, 60
               

               
Conread position:
               
112-502
               

               
Cow position:
               
chr16:12633683-12634079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
137, 51
               

               
Conread position:
               
113-435
               

               
Cow position:
               
chr16:41530500-41530172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
136, 94
               

               
Conread position:
               
116-408
               

               
Cow position:
               
chr16:52275336-52275027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 145
               

               
Conread position:
               
118-267
               

               
Cow position:
               
chr16:7928388-7928529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
120-397
               

               
Cow position:
               
chr16:592020-591720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
121-425
               

               
Cow position:
               
chr16:14685590-14685271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
123, 81
               

               
Conread position:
               
122-265
               

               
Cow position:
               
chr16:9787360-9787506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 90
               

               
Conread position:
               
123-472
               

               
Cow position:
               
chr16:17626731-17627095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
125, 83
               

               
Conread position:
               
130-390
               

               
Cow position:
               
chr16:3821341-3821612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
141-443
               

               
Cow position:
               
chr16:8231539-8231232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
146-420
               

               
Cow position:
               
chr16:34153750-34153457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
118, 61
               

               
Conread position:
               
150-342
               

               
Cow position:
               
chr16:24637507-24637317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
151-449
               

               
Cow position:
               
chr16:52133686-52133373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 56
               

               
Conread position:
               
151-515
               

               
Cow position:
               
chr16:14974703-14974333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
158-425
               

               
Cow position:
               
chr16:25380660-25380376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
159-599
               

               
Cow position:
               
chr16:35296910-35297378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
90, 48
               

               
Conread position:
               
185-477
               

               
Cow position:
               
chr16:10945578-10945270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 131
               

               
Conread position:
               
212-425
               

               
Cow position:
               
chr16:47854826-47855057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 198
               

               
Conread position:
               
213-426
               

               
Cow position:
               
chr16:54226715-54226480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
221-593
               

               
Cow position:
               
chr16:43674766-43675161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
265-516
               

               
Cow position:
               
chr16:15407602-15407350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
266-447
               

               
Cow position:
               
chr16:7619223-7619040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
161, 38
               

               
Conread position:
               
266-449
               

               
Cow position:
               
chr16:17135682-17135869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
267-511
               

               
Cow position:
               
chr16:33405540-33405286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
271-443
               

               
Cow position:
               
chr16:23955870-23955695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
271-536
               

               
Cow position:
               
chr16:13414705-13414436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
275-504
               

               
Cow position:
               
chr16:8206108-8205885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
276-599
               

               
Cow position:
               
chr16:33530371-33530722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
287-599
               

               
Cow position:
               
chr16:9500497-9500807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
288-472
               

               
Cow position:
               
chr16:1415322-1415138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
326-449
               

               
Cow position:
               
chr16:8953666-8953540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
18, 46
               

               
Conread position:
               
331-541
               

               
Cow position:
               
chr16:27032603-27032815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
332-449
               

               
Cow position:
               
chr16:23187571-23187687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
417-597
               

               
Cow position:
               
chr16:31159304-31159121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 61
               

               
Conread position:
               
464-600
               

               
Cow position:
               
chr16:52705958-52705821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
470-597
               

               
Cow position:
               
chr16:11922912-11922783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
472-585
               

               
Cow position:
               
chr16:48340294-48340183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               
Show alignments to all cow chromosomes.