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Cow genome map

           
Conread name:
           
Ss1.1-rsag038_l19.5
        

               
Conread position:
               
45-411
               

               
Cow position:
               
chr23:3262779-3262391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
63-262
               

               
Cow position:
               
chr23:33233166-33232975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
67-435
               

               
Cow position:
               
chr23:36129159-36128783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
67-441
               

               
Cow position:
               
chr23:40778006-40778398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 146
               

               
Conread position:
               
73-425
               

               
Cow position:
               
chr23:21445874-21446237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
175, 49
               

               
Conread position:
               
74-263
               

               
Cow position:
               
chr23:25189096-25189280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
74-425
               

               
Cow position:
               
chr23:27544587-27544947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
174, 21
               

               
Conread position:
               
78-227
               

               
Cow position:
               
chr23:21394807-21394654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
126, 117
               

               
Conread position:
               
79-573
               

               
Cow position:
               
chr23:20435293-20434815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
7, 92
               

               
Conread position:
               
80-262
               

               
Cow position:
               
chr23:3910245-3910068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
81-250
               

               
Cow position:
               
chr23:4523214-4523053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
82-245
               

               
Cow position:
               
chr23:28118341-28118182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 118
               

               
Conread position:
               
82-332
               

               
Cow position:
               
chr23:27862094-27862350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
157, 11
               

               
Conread position:
               
83-259
               

               
Cow position:
               
chr23:2259837-2259664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 119
               

               
Conread position:
               
83-342
               

               
Cow position:
               
chr23:1803554-1803817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
71, 13
               

               
Conread position:
               
83-375
               

               
Cow position:
               
chr23:416923-417218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
183, 115
               

               
Conread position:
               
83-400
               

               
Cow position:
               
chr23:25378419-25378742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 17
               

               
Conread position:
               
83-444
               

               
Cow position:
               
chr23:5617339-5617712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
165, 124
               

               
Conread position:
               
83-446
               

               
Cow position:
               
chr23:1924073-1923694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
163, 123
               

               
Conread position:
               
83-497
               

               
Cow position:
               
chr23:20388876-20388454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 48
               

               
Conread position:
               
84-444
               

               
Cow position:
               
chr23:10852816-10853185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
164, 66
               

               
Conread position:
               
85-205
               

               
Cow position:
               
chr23:8918088-8917966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
74, 104
               

               
Conread position:
               
85-384
               

               
Cow position:
               
chr23:26319182-26319479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
85-408
               

               
Cow position:
               
chr23:36309190-36309524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
163, 71
               

               
Conread position:
               
85-424
               

               
Cow position:
               
chr23:11315252-11314914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
206, 71
               

               
Conread position:
               
85-425
               

               
Cow position:
               
chr23:26948955-26949317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 131
               

               
Conread position:
               
85-444
               

               
Cow position:
               
chr23:25864919-25864559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
184, 90
               

               
Conread position:
               
85-451
               

               
Cow position:
               
chr23:30662863-30662489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 227
               

               
Conread position:
               
85-471
               

               
Cow position:
               
chr23:7596566-7596188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 33
               

               
Conread position:
               
85-472
               

               
Cow position:
               
chr23:1398273-1397867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 122
               

               
Conread position:
               
85-600
               

               
Cow position:
               
chr23:14739213-14739734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 94
               

               
Conread position:
               
86-195
               

               
Cow position:
               
chr23:20605512-20605399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
86-195
               

               
Cow position:
               
chr23:26003830-26003939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
86-200
               

               
Cow position:
               
chr23:29742151-29742269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
86-226
               

               
Cow position:
               
chr23:10415260-10415121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
86-247
               

               
Cow position:
               
chr23:1905794-1905959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 96
               

               
Conread position:
               
86-250
               

               
Cow position:
               
chr23:5395659-5395500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 120
               

               
Conread position:
               
86-254
               

               
Cow position:
               
chr23:18367461-18367620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
86-255
               

               
Cow position:
               
chr23:3247354-3247512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
86-255
               

               
Cow position:
               
chr23:21343484-21343323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 121
               

               
Conread position:
               
86-255
               

               
Cow position:
               
chr23:39793220-39793378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
86-259
               

               
Cow position:
               
chr23:1991661-1991497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
86-266
               

               
Cow position:
               
chr23:11080847-11081018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
86-267
               

               
Cow position:
               
chr23:1321428-1321260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
86-267
               

               
Cow position:
               
chr23:1430029-1429857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
86-267
               

               
Cow position:
               
chr23:7402472-7402645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
163, 70
               

               
Conread position:
               
86-267
               

               
Cow position:
               
chr23:37992755-37992930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
86-270
               

               
Cow position:
               
chr23:41285695-41285863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
86-285
               

               
Cow position:
               
chr23:12896835-12896641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
189, 121
               

               
Conread position:
               
86-338
               

               
Cow position:
               
chr23:2055468-2055731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 120
               

               
Conread position:
               
86-343
               

               
Cow position:
               
chr23:19979181-19978922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 124
               

               
Conread position:
               
86-345
               

               
Cow position:
               
chr23:9595062-9594800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
158, 33
               

               
Conread position:
               
86-361
               

               
Cow position:
               
chr23:20057101-20056810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 134
               

               
Conread position:
               
86-377
               

               
Cow position:
               
chr23:6367371-6367683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 220
               

               
Conread position:
               
86-378
               

               
Cow position:
               
chr23:25358497-25358797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
46, 96
               

               
Conread position:
               
86-384
               

               
Cow position:
               
chr23:27563943-27563621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
176, 121
               

               
Conread position:
               
86-390
               

               
Cow position:
               
chr23:7392516-7392219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
205, 54
               

               
Conread position:
               
86-392
               

               
Cow position:
               
chr23:1883159-1883483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 117
               

               
Conread position:
               
86-395
               

               
Cow position:
               
chr23:10416657-10416330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 69
               

               
Conread position:
               
86-397
               

               
Cow position:
               
chr23:28053043-28053364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
158, 89
               

               
Conread position:
               
86-406
               

               
Cow position:
               
chr23:12050131-12050458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
180, 120
               

               
Conread position:
               
86-408
               

               
Cow position:
               
chr23:7845055-7845397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 117
               

               
Conread position:
               
86-417
               

               
Cow position:
               
chr23:15287368-15287027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 125
               

               
Conread position:
               
86-420
               

               
Cow position:
               
chr23:33711534-33711875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
162, 25
               

               
Conread position:
               
86-422
               

               
Cow position:
               
chr23:1337538-1337192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
86-422
               

               
Cow position:
               
chr23:16583143-16582792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
162, 81
               

               
Conread position:
               
86-422
               

               
Cow position:
               
chr23:29471353-29471023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
163, 88
               

               
Conread position:
               
86-423
               

               
Cow position:
               
chr23:33601758-33601420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
162, 75
               

               
Conread position:
               
86-424
               

               
Cow position:
               
chr23:5706766-5707113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
186, 116
               

               
Conread position:
               
86-424
               

               
Cow position:
               
chr23:6244821-6244477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
86-424
               

               
Cow position:
               
chr23:15742865-15743209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
162, 59
               

               
Conread position:
               
86-424
               

               
Cow position:
               
chr23:18698259-18697906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
178, 89
               

               
Conread position:
               
86-424
               

               
Cow position:
               
chr23:29034079-29034434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 120
               

               
Conread position:
               
86-425
               

               
Cow position:
               
chr23:1254443-1254808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 102
               

               
Conread position:
               
86-425
               

               
Cow position:
               
chr23:16700273-16699921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 59
               

               
Conread position:
               
86-425
               

               
Cow position:
               
chr23:39752880-39753234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
86-426
               

               
Cow position:
               
chr23:40781092-40781450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
162, 121
               

               
Conread position:
               
86-428
               

               
Cow position:
               
chr23:5603505-5603160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
179, 70
               

               
Conread position:
               
86-433
               

               
Cow position:
               
chr23:11045250-11045617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
86-435
               

               
Cow position:
               
chr23:24704041-24704423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
17, 127
               

               
Conread position:
               
86-443
               

               
Cow position:
               
chr23:13511499-13511866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
47, 115
               

               
Conread position:
               
86-443
               

               
Cow position:
               
chr23:26795138-26794779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
183, 84
               

               
Conread position:
               
86-443
               

               
Cow position:
               
chr23:28206377-28206734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
172, 89
               

               
Conread position:
               
86-444
               

               
Cow position:
               
chr23:4972549-4972905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
86-444
               

               
Cow position:
               
chr23:21789005-21788625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
113, 91
               

               
Conread position:
               
86-446
               

               
Cow position:
               
chr23:22804489-22804866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
86, 122
               

               
Conread position:
               
86-449
               

               
Cow position:
               
chr23:10554245-10553860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
86-451
               

               
Cow position:
               
chr23:5162198-5162576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
163, 80
               

               
Conread position:
               
86-451
               

               
Cow position:
               
chr23:14164634-14164246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
160, 70
               

               
Conread position:
               
86-451
               

               
Cow position:
               
chr23:38455419-38455033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
86-452
               

               
Cow position:
               
chr23:8293267-8293647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
72, 114
               

               
Conread position:
               
86-454
               

               
Cow position:
               
chr23:29242712-29243087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 116
               

               
Conread position:
               
86-459
               

               
Cow position:
               
chr23:20744823-20744438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
178, 73
               

               
Conread position:
               
86-460
               

               
Cow position:
               
chr23:344412-344033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 119
               

               
Conread position:
               
86-477
               

               
Cow position:
               
chr23:21336723-21336312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
94, 76
               

               
Conread position:
               
86-516
               

               
Cow position:
               
chr23:11129000-11129442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 103
               

               
Conread position:
               
86-584
               

               
Cow position:
               
chr23:353812-353323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
189, 133
               

               
Conread position:
               
87-200
               

               
Cow position:
               
chr23:7937773-7937663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
87-200
               

               
Cow position:
               
chr23:35366332-35366218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
87-200
               

               
Cow position:
               
chr23:35369244-35369130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
87-205
               

               
Cow position:
               
chr23:11209776-11209896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
65, 108
               

               
Conread position:
               
87-247
               

               
Cow position:
               
chr23:2470351-2470511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
72, 115
               

               
Conread position:
               
87-250
               

               
Cow position:
               
chr23:39309348-39309192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
87-253
               

               
Cow position:
               
chr23:14896037-14895871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 124
               

               
Conread position:
               
87-259
               

               
Cow position:
               
chr23:41348882-41348713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
87-262
               

               
Cow position:
               
chr23:18802506-18802337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr23:3727635-3727452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
67, 124
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr23:4579269-4579096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
12, 90
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr23:19002302-19002119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 123
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr23:26849134-26848963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
87-267
               

               
Cow position:
               
chr23:33696008-33695829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 124
               

               
Conread position:
               
87-372
               

               
Cow position:
               
chr23:2179880-2179595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
67, 58
               

               
Conread position:
               
87-378
               

               
Cow position:
               
chr23:24509469-24509767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
87-382
               

               
Cow position:
               
chr23:7175387-7175688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
175, 120
               

               
Conread position:
               
87-387
               

               
Cow position:
               
chr23:33940389-33940075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
87-388
               

               
Cow position:
               
chr23:4810517-4810824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 120
               

               
Conread position:
               
87-388
               

               
Cow position:
               
chr23:5870416-5870109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
82, 121
               

               
Conread position:
               
87-389
               

               
Cow position:
               
chr23:10085416-10085101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
159, 98
               

               
Conread position:
               
87-389
               

               
Cow position:
               
chr23:34416339-34416646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
161, 49
               

               
Conread position:
               
87-390
               

               
Cow position:
               
chr23:2316572-2316873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
159, 39
               

               
Conread position:
               
87-390
               

               
Cow position:
               
chr23:31601691-31601365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 124
               

               
Conread position:
               
87-397
               

               
Cow position:
               
chr23:18322653-18322334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
87-402
               

               
Cow position:
               
chr23:39806639-39806967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
87-408
               

               
Cow position:
               
chr23:37065604-37065953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 125
               

               
Conread position:
               
87-420
               

               
Cow position:
               
chr23:1885409-1885054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 121
               

               
Conread position:
               
87-420
               

               
Cow position:
               
chr23:29345993-29345653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
65, 124
               

               
Conread position:
               
87-423
               

               
Cow position:
               
chr23:21452966-21452611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 122
               

               
Conread position:
               
87-424
               

               
Cow position:
               
chr23:1878105-1877776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
8, 116
               

               
Conread position:
               
87-424
               

               
Cow position:
               
chr23:39775498-39775845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
161, 19
               

               
Conread position:
               
87-425
               

               
Cow position:
               
chr23:26632566-26632925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 119
               

               
Conread position:
               
87-430
               

               
Cow position:
               
chr23:6592927-6592583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
161, 60
               

               
Conread position:
               
87-430
               

               
Cow position:
               
chr23:22396679-22396322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 121
               

               
Conread position:
               
87-433
               

               
Cow position:
               
chr23:1536094-1536451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
170, 88
               

               
Conread position:
               
87-433
               

               
Cow position:
               
chr23:29459322-29458970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 97
               

               
Conread position:
               
87-440
               

               
Cow position:
               
chr23:2282407-2282047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
63, 35
               

               
Conread position:
               
87-441
               

               
Cow position:
               
chr23:13599108-13599477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
70, 121
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr23:186938-187316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
49, 117
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr23:533996-534367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
117, 173
               

               
Conread position:
               
87-446
               

               
Cow position:
               
chr23:38208477-38208868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
77, 314
               

               
Conread position:
               
87-448
               

               
Cow position:
               
chr23:13555661-13555291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
182, 68
               

               
Conread position:
               
87-453
               

               
Cow position:
               
chr23:22530651-22530294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
70, 119
               

               
Conread position:
               
87-454
               

               
Cow position:
               
chr23:9268356-9268728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
70, 149
               

               
Conread position:
               
87-457
               

               
Cow position:
               
chr23:20195151-20194775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
70, 99
               

               
Conread position:
               
87-519
               

               
Cow position:
               
chr23:4968753-4968317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
87-584
               

               
Cow position:
               
chr23:15056875-15056365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
182, 146
               

               
Conread position:
               
88-198
               

               
Cow position:
               
chr23:27529524-27529415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
88-247
               

               
Cow position:
               
chr23:4338839-4338684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
76, 123
               

               
Conread position:
               
88-266
               

               
Cow position:
               
chr23:3208851-3208678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
164, 118
               

               
Conread position:
               
88-390
               

               
Cow position:
               
chr23:1604991-1605314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 123
               

               
Conread position:
               
88-397
               

               
Cow position:
               
chr23:32309449-32309778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
143, 61
               

               
Conread position:
               
88-424
               

               
Cow position:
               
chr23:2799334-2799699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 354
               

               
Conread position:
               
88-451
               

               
Cow position:
               
chr23:10876197-10876547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
251, 36
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr23:14838967-14838554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
164, 9
               

               
Conread position:
               
89-259
               

               
Cow position:
               
chr23:8006009-8006174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
89-330
               

               
Cow position:
               
chr23:5151757-5152012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 216
               

               
Conread position:
               
89-334
               

               
Cow position:
               
chr23:7484848-7485091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
89-392
               

               
Cow position:
               
chr23:15710309-15709984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
90-205
               

               
Cow position:
               
chr23:4980774-4980660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
93-258
               

               
Cow position:
               
chr23:32961596-32961435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 116
               

               
Conread position:
               
93-420
               

               
Cow position:
               
chr23:2502075-2501738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
173, 13
               

               
Conread position:
               
93-424
               

               
Cow position:
               
chr23:9734187-9734528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
155, 115
               

               
Conread position:
               
96-425
               

               
Cow position:
               
chr23:5723319-5723655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 111
               

               
Conread position:
               
97-380
               

               
Cow position:
               
chr23:40502736-40502439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 113
               

               
Conread position:
               
98-443
               

               
Cow position:
               
chr23:16690284-16689931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
58, 114
               

               
Conread position:
               
101-496
               

               
Cow position:
               
chr23:4504608-4505003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 110
               

               
Conread position:
               
106-247
               

               
Cow position:
               
chr23:1068527-1068393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
88, 97
               

               
Conread position:
               
106-420
               

               
Cow position:
               
chr23:2457248-2457558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
52, 101
               

               
Conread position:
               
107-427
               

               
Cow position:
               
chr23:40648941-40648608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
108-434
               

               
Cow position:
               
chr23:18296595-18296938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
140, 94
               

               
Conread position:
               
110-431
               

               
Cow position:
               
chr23:23409536-23409859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
139, 52
               

               
Conread position:
               
111-270
               

               
Cow position:
               
chr23:1776840-1776687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
123-385
               

               
Cow position:
               
chr23:1189099-1188832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
123-399
               

               
Cow position:
               
chr23:30999378-30999659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
123-410
               

               
Cow position:
               
chr23:38973649-38973953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
123-440
               

               
Cow position:
               
chr23:40443668-40443998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
126-491
               

               
Cow position:
               
chr23:19371265-19370882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
132-449
               

               
Cow position:
               
chr23:4104218-4104544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
140-482
               

               
Cow position:
               
chr23:3282295-3281941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
151-434
               

               
Cow position:
               
chr23:1767661-1767959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
158-449
               

               
Cow position:
               
chr23:18416210-18415912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
162-571
               

               
Cow position:
               
chr23:23113871-23114278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
170-441
               

               
Cow position:
               
chr23:37887-38162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
210-442
               

               
Cow position:
               
chr23:24562007-24561778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 58
               

               
Conread position:
               
212-464
               

               
Cow position:
               
chr23:30950844-30951114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 226
               

               
Conread position:
               
219-600
               

               
Cow position:
               
chr23:4335969-4336378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
264-572
               

               
Cow position:
               
chr23:39793632-39793948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
266-600
               

               
Cow position:
               
chr23:360734-360395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
270-443
               

               
Cow position:
               
chr23:35503743-35503910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
285-475
               

               
Cow position:
               
chr23:4241663-4241473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
290-527
               

               
Cow position:
               
chr23:25938407-25938168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
312-485
               

               
Cow position:
               
chr23:32546264-32546091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
315-512
               

               
Cow position:
               
chr23:19273658-19273863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
342-560
               

               
Cow position:
               
chr23:5387052-5386844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
349-566
               

               
Cow position:
               
chr23:5174585-5174807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 107
               

               
Conread position:
               
349-596
               

               
Cow position:
               
chr23:31299219-31299465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 80
               

               
Conread position:
               
358-600
               

               
Cow position:
               
chr23:3137361-3137588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
424-585
               

               
Cow position:
               
chr23:4578985-4578823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
430-591
               

               
Cow position:
               
chr23:12602373-12602215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 25
               
Show alignments to all cow chromosomes.