Cow genome map

Conread name: Ss1.1-rsag038_l19.5

Conread position: 58-263
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 27

Conread position: 76-267
Cow position:
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 170, 85

Conread position: 81-396
Cow position:
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 71

Conread position: 81-464
Cow position:
Alignm length: 403
Alignm identity: 265
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 75, 154

Conread position: 83-262
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 83-392
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 111

Conread position: 84-418
Cow position:
Alignm length: 365
Alignm identity: 251
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 96, 121

Conread position: 85-205
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 85-264
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 41

Conread position: 85-381
Cow position:
Alignm length: 315
Alignm identity: 216
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 116, 207

Conread position: 85-408
Cow position:
Alignm length: 329
Alignm identity: 235
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 88, 18

Conread position: 85-408
Cow position:
Alignm length: 349
Alignm identity: 234
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 74, 121

Conread position: 85-443
Cow position:
Alignm length: 380
Alignm identity: 260
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 63, 97

Conread position: 85-451
Cow position:
Alignm length: 401
Alignm identity: 269
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 163, 105

Conread position: 86-227
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 86-234
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 71, 125

Conread position: 86-247
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 86-250
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 116, 0

Conread position: 86-250
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 86-262
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 86, 122

Conread position: 86-266
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 123

Conread position: 86-266
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 86-266
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 71, 124

Conread position: 86-267
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 10, 126

Conread position: 86-267
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 118, 27

Conread position: 86-267
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 110, 70

Conread position: 86-330
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 75, 19

Conread position: 86-341
Cow position:
Alignm length: 266
Alignm identity: 183
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 25

Conread position: 86-342
Cow position:
Alignm length: 270
Alignm identity: 187
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 50, 119

Conread position: 86-384
Cow position:
Alignm length: 305
Alignm identity: 198
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 178, 121

Conread position: 86-390
Cow position:
Alignm length: 332
Alignm identity: 236
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 84, 118

Conread position: 86-408
Cow position:
Alignm length: 355
Alignm identity: 248
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 58, 117

Conread position: 86-414
Cow position:
Alignm length: 348
Alignm identity: 244
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 162, 58

Conread position: 86-424
Cow position:
Alignm length: 362
Alignm identity: 251
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 78, 156

Conread position: 86-425
Cow position:
Alignm length: 367
Alignm identity: 256
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 71, 125

Conread position: 86-425
Cow position:
Alignm length: 345
Alignm identity: 241
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 178, 120

Conread position: 86-425
Cow position:
Alignm length: 352
Alignm identity: 235
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 144, 78

Conread position: 86-428
Cow position:
Alignm length: 349
Alignm identity: 231
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 55

Conread position: 86-434
Cow position:
Alignm length: 370
Alignm identity: 255
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 175

Conread position: 86-442
Cow position:
Alignm length: 373
Alignm identity: 256
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 184, 116

Conread position: 86-444
Cow position:
Alignm length: 367
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 163, 14

Conread position: 86-445
Cow position:
Alignm length: 377
Alignm identity: 265
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 162, 89

Conread position: 86-448
Cow position:
Alignm length: 383
Alignm identity: 252
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 73, 10

Conread position: 86-449
Cow position:
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 41

Conread position: 86-451
Cow position:
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 98

Conread position: 86-459
Cow position:
Alignm length: 388
Alignm identity: 256
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 71, 165

Conread position: 86-514
Cow position:
Alignm length: 452
Alignm identity: 300
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 80, 122

Conread position: 87-247
Cow position:
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 121

Conread position: 87-247
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 87-247
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 87-257
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 87-261
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 59, 123

Conread position: 87-262
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 87-262
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 87-266
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 87-266
Cow position:
Alignm length: 183
Alignm identity: 133
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 157, 84

Conread position: 87-266
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 159, 67

Conread position: 87-337
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 185, 74

Conread position: 87-338
Cow position:
Alignm length: 273
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 107

Conread position: 87-343
Cow position:
Alignm length: 263
Alignm identity: 189
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 72, 123

Conread position: 87-343
Cow position:
Alignm length: 274
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 123

Conread position: 87-366
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 161, 46

Conread position: 87-376
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 81, 124

Conread position: 87-388
Cow position:
Alignm length: 326
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 124

Conread position: 87-390
Cow position:
Alignm length: 316
Alignm identity: 217
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 71, 124

Conread position: 87-390
Cow position:
Alignm length: 329
Alignm identity: 225
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 18, 122

Conread position: 87-390
Cow position:
Alignm length: 309
Alignm identity: 212
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 171, 120

Conread position: 87-390
Cow position:
Alignm length: 308
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 160, 78

Conread position: 87-390
Cow position:
Alignm length: 318
Alignm identity: 219
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 39, 122

Conread position: 87-390
Cow position:
Alignm length: 314
Alignm identity: 215
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 159, 119

Conread position: 87-390
Cow position:
Alignm length: 315
Alignm identity: 214
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 176, 91

Conread position: 87-397
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 123

Conread position: 87-408
Cow position:
Alignm length: 334
Alignm identity: 233
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 169, 25

Conread position: 87-424
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 152, 74

Conread position: 87-424
Cow position:
Alignm length: 361
Alignm identity: 256
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 70, 92

Conread position: 87-435
Cow position:
Alignm length: 379
Alignm identity: 268
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 75, 178

Conread position: 87-444
Cow position:
Alignm length: 372
Alignm identity: 254
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 70, 124

Conread position: 87-449
Cow position:
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 124

Conread position: 87-464
Cow position:
Alignm length: 409
Alignm identity: 289
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 99, 83

Conread position: 87-467
Cow position:
Alignm length: 408
Alignm identity: 290
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 92

Conread position: 87-505
Cow position:
Alignm length: 438
Alignm identity: 296
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 161, 87

Conread position: 88-205
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 88-247
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 128

Conread position: 88-267
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 123

Conread position: 88-408
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 171, 45

Conread position: 88-442
Cow position:
Alignm length: 375
Alignm identity: 259
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 160, 81

Conread position: 88-511
Cow position:
Alignm length: 441
Alignm identity: 282
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 39

Conread position: 89-251
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 89-259
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 89-267
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 89

Conread position: 89-425
Cow position:
Alignm length: 356
Alignm identity: 238
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 122

Conread position: 89-425
Cow position:
Alignm length: 353
Alignm identity: 233
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 159, 122

Conread position: 89-426
Cow position:
Alignm length: 354
Alignm identity: 236
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 67, 169

Conread position: 89-470
Cow position:
Alignm length: 393
Alignm identity: 264
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 192, 13

Conread position: 90-268
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 96

Conread position: 90-422
Cow position:
Alignm length: 343
Alignm identity: 235
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 159, 117

Conread position: 93-259
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 93-422
Cow position:
Alignm length: 351
Alignm identity: 245
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 118

Conread position: 93-423
Cow position:
Alignm length: 356
Alignm identity: 251
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 155, 85

Conread position: 93-443
Cow position:
Alignm length: 384
Alignm identity: 267
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 71, 110

Conread position: 95-200
Cow position:
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 97-417
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 13, 80

Conread position: 97-422
Cow position:
Alignm length: 355
Alignm identity: 249
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 89, 77

Conread position: 98-390
Cow position:
Alignm length: 308
Alignm identity: 210
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 112

Conread position: 98-427
Cow position:
Alignm length: 341
Alignm identity: 217
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 102

Conread position: 106-267
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 100

Conread position: 110-443
Cow position:
Alignm length: 349
Alignm identity: 230
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 133, 6

Conread position: 124-331
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 122, 82

Conread position: 127-424
Cow position:
Alignm length: 320
Alignm identity: 223
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 84

Conread position: 127-444
Cow position:
Alignm length: 342
Alignm identity: 238
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 51, 23

Conread position: 129-267
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 78

Conread position: 131-425
Cow position:
Alignm length: 323
Alignm identity: 224
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 75

Conread position: 158-424
Cow position:
Alignm length: 284
Alignm identity: 194
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 118, 53

Conread position: 164-443
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 84, 34

Conread position: 177-499
Cow position:
Alignm length: 352
Alignm identity: 243
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 62, 30

Conread position: 199-443
Cow position:
Alignm length: 262
Alignm identity: 182
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 116

Conread position: 220-443
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 29, 92

Conread position: 220-457
Cow position:
Alignm length: 259
Alignm identity: 181
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 224

Conread position: 266-446
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 176

Conread position: 270-417
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 32

Conread position: 272-446
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 27

Conread position: 275-497
Cow position:
Alignm length: 230
Alignm identity: 153
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 29, 167

Conread position: 278-447
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 13

Conread position: 287-480
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 14

Conread position: 297-600
Cow position:
Alignm length: 311
Alignm identity: 208
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 132

Conread position: 306-536
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 7, 25

Conread position: 349-576
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 114

Conread position: 451-595
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 56

Show alignments to all cow chromosomes.