Cow genome map

Conread name: Ss1.1-rsag038_l19.5

Conread position: 62-376
Cow position: chr29:44989040-44988723 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 102, 15

Conread position: 63-441
Cow position: chr29:4520075-4520468 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 139

Conread position: 67-267
Cow position: chr29:4065828-4066026 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 17, 54

Conread position: 67-414
Cow position: chr29:37961234-37960871 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 10

Conread position: 67-445
Cow position: chr29:45005873-45005491 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 252
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 137, 18

Conread position: 69-270
Cow position: chr29:24103804-24103602 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 9

Conread position: 71-341
Cow position: chr29:19254075-19253804 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 177, 136

Conread position: 72-500
Cow position: chr29:26329963-26330388 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 296
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 22

Conread position: 73-512
Cow position: chr29:16657437-16657893 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 317
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 33

Conread position: 78-449
Cow position: chr29:22714973-22714582 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 272
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 84, 128

Conread position: 79-226
Cow position: chr29:477857-478009 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 79-337
Cow position: chr29:20178368-20178113 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 196, 22

Conread position: 82-427
Cow position: chr29:30440683-30441055 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 24, 104

Conread position: 83-334
Cow position: chr29:18748827-18748584 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 74, 128

Conread position: 83-413
Cow position: chr29:40852693-40853032 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 235
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 69, 10

Conread position: 83-425
Cow position: chr29:2644548-2644194 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 214
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 55

Conread position: 83-425
Cow position: chr29:40117329-40117687 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 10

Conread position: 83-449
Cow position: chr29:87260-86872 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 272
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 14

Conread position: 83-576
Cow position: chr29:26318951-26319444 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 335
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 195, 32

Conread position: 84-449
Cow position: chr29:22175451-22175821 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 257
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 18

Conread position: 85-267
Cow position: chr29:7666269-7666089 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 154, 122

Conread position: 85-378
Cow position: chr29:26263613-26263905 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 178, 46

Conread position: 85-387
Cow position: chr29:5948025-5947728 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 163, 103

Conread position: 85-434
Cow position: chr29:29056946-29057302 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 37

Conread position: 85-446
Cow position: chr29:34360032-34359687 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 259
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 163, 37

Conread position: 85-459
Cow position: chr29:13028219-13028590 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 248
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 86, 55

Conread position: 86-204
Cow position: chr29:10296677-10296558 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 86-205
Cow position: chr29:21665733-21665852 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 86-205
Cow position: chr29:22339450-22339331 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 86-205
Cow position: chr29:29066189-29066308 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 86-225
Cow position: chr29:2263263-2263120 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 86-230
Cow position: chr29:6014866-6015010 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 122, 39

Conread position: 86-259
Cow position: chr29:39111545-39111387 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 86-259
Cow position: chr29:40902956-40902794 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 86-263
Cow position: chr29:26734796-26734961 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 86-267
Cow position: chr29:4804996-4805172 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 162, 88

Conread position: 86-267
Cow position: chr29:5977358-5977171 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 44

Conread position: 86-325
Cow position: chr29:21000404-21000643 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 44

Conread position: 86-330
Cow position: chr29:10659585-10659338 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 46, 130

Conread position: 86-335
Cow position: chr29:35738507-35738253 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 196
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 71, 125

Conread position: 86-341
Cow position: chr29:2522341-2522590 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 162, 49

Conread position: 86-342
Cow position: chr29:24119974-24119714 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 86, 123

Conread position: 86-348
Cow position: chr29:6217784-6217521 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 60, 90

Conread position: 86-348
Cow position: chr29:9686238-9685975 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 160, 64

Conread position: 86-367
Cow position: chr29:32767758-32767487 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 177, 75

Conread position: 86-377
Cow position: chr29:6925782-6926073 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 162, 75

Conread position: 86-377
Cow position: chr29:9139171-9139489 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 89, 122

Conread position: 86-380
Cow position: chr29:16309513-16309814 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 162, 61

Conread position: 86-384
Cow position: chr29:40166005-40166319 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 69

Conread position: 86-387
Cow position: chr29:17342-17034 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 66

Conread position: 86-387
Cow position: chr29:17668258-17668565 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 73, 148

Conread position: 86-392
Cow position: chr29:11562377-11562696 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 77, 100

Conread position: 86-395
Cow position: chr29:7408126-7407818 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 73, 125

Conread position: 86-400
Cow position: chr29:23984200-23983864 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 64, 125

Conread position: 86-408
Cow position: chr29:28868395-28868742 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 120

Conread position: 86-414
Cow position: chr29:4194358-4194023 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 162, 50

Conread position: 86-422
Cow position: chr29:7956221-7955877 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 186, 121

Conread position: 86-422
Cow position: chr29:17409092-17409448 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 38, 126

Conread position: 86-423
Cow position: chr29:31926527-31926186 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 240
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 90, 40

Conread position: 86-425
Cow position: chr29:1933794-1933455 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 231, 114

Conread position: 86-425
Cow position: chr29:16195615-16195956 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 188, 78

Conread position: 86-425
Cow position: chr29:22162488-22162133 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 160, 75

Conread position: 86-425
Cow position: chr29:28195754-28195405 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 71, 95

Conread position: 86-425
Cow position: chr29:35291862-35292210 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 160, 61

Conread position: 86-443
Cow position: chr29:21443581-21443206 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 159, 121

Conread position: 86-443
Cow position: chr29:40891939-40891574 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 64, 125

Conread position: 86-445
Cow position: chr29:23874222-23874594 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 254
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 149, 104

Conread position: 86-446
Cow position: chr29:29769583-29769215 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 162, 59

Conread position: 86-449
Cow position: chr29:12784192-12783823 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 270
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 156, 82

Conread position: 86-454
Cow position: chr29:25088516-25088889 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 264
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 158, 116

Conread position: 86-459
Cow position: chr29:19756211-19756580 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 255
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 163, 84

Conread position: 86-459
Cow position: chr29:30367260-30366914 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 249
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 227, 44

Conread position: 86-459
Cow position: chr29:32799940-32799563 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 275
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 166, 64

Conread position: 86-511
Cow position: chr29:26017748-26017299 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 29

Conread position: 86-512
Cow position: chr29:707182-706758 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 32

Conread position: 86-573
Cow position: chr29:20903525-20903031 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 338
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 75, 120

Conread position: 87-200
Cow position: chr29:1582862-1582746 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 70, 14

Conread position: 87-205
Cow position: chr29:16735242-16735120 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 87-205
Cow position: chr29:45588709-45588591 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 101
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 87-247
Cow position: chr29:20933469-20933628 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 124

Conread position: 87-250
Cow position: chr29:686428-686267 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 120, 0

Conread position: 87-250
Cow position: chr29:13458822-13458978 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 115, 0

Conread position: 87-255
Cow position: chr29:16609502-16609666 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 37

Conread position: 87-259
Cow position: chr29:35636188-35636358 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 73

Conread position: 87-259
Cow position: chr29:37785415-37785241 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 70, 114

Conread position: 87-261
Cow position: chr29:18735879-18735707 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 123

Conread position: 87-261
Cow position: chr29:36183039-36183211 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 86, 46

Conread position: 87-262
Cow position: chr29:699851-699685 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 87-262
Cow position: chr29:45650579-45650412 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 87-263
Cow position: chr29:4120609-4120780 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 69, 0

Conread position: 87-266
Cow position: chr29:18878737-18878561 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 87-341
Cow position: chr29:5919561-5919309 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 114

Conread position: 87-342
Cow position: chr29:12005001-12004736 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 115, 80

Conread position: 87-367
Cow position: chr29:18212219-18211940 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 69, 89

Conread position: 87-376
Cow position: chr29:16756818-16757102 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 213
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 123

Conread position: 87-380
Cow position: chr29:15944333-15944630 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 121

Conread position: 87-382
Cow position: chr29:2071805-2071496 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 107, 71

Conread position: 87-388
Cow position: chr29:19389250-19389557 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 159, 39

Conread position: 87-389
Cow position: chr29:36586342-36586647 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 82, 121

Conread position: 87-390
Cow position: chr29:1307100-1306779 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 25

Conread position: 87-390
Cow position: chr29:20674042-20673729 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 223
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 15, 124

Conread position: 87-390
Cow position: chr29:29312751-29312464 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 159, 50

Conread position: 87-390
Cow position: chr29:35434634-35434938 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 70, 124

Conread position: 87-391
Cow position: chr29:23578012-23577706 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 200, 120

Conread position: 87-397
Cow position: chr29:20626340-20626655 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 190, 66

Conread position: 87-398
Cow position: chr29:465638-465310 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 32, 125

Conread position: 87-408
Cow position: chr29:24952449-24952784 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 72, 21

Conread position: 87-414
Cow position: chr29:32290366-32290716 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 161, 141

Conread position: 87-419
Cow position: chr29:7966010-7966356 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 71, 37

Conread position: 87-422
Cow position: chr29:34297801-34297455 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 21, 17

Conread position: 87-423
Cow position: chr29:36216881-36217226 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 161, 115

Conread position: 87-424
Cow position: chr29:19949073-19949422 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 63, 124

Conread position: 87-424
Cow position: chr29:29589153-29588812 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 228
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 127

Conread position: 87-424
Cow position: chr29:44378655-44378304 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 161, 120

Conread position: 87-425
Cow position: chr29:6635868-6636194 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 163, 74

Conread position: 87-428
Cow position: chr29:37599441-37599101 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 162, 95

Conread position: 87-429
Cow position: chr29:13615879-13615535 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 159, 26

Conread position: 87-432
Cow position: chr29:39567451-39567804 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 161, 114

Conread position: 87-434
Cow position: chr29:9709462-9709820 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 65

Conread position: 87-435
Cow position: chr29:35501885-35501530 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 179, 77

Conread position: 87-441
Cow position: chr29:6844866-6844502 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 266
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 69, 90

Conread position: 87-441
Cow position: chr29:34745891-34745529 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 238
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 76

Conread position: 87-442
Cow position: chr29:11704886-11705246 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 74, 118

Conread position: 87-443
Cow position: chr29:4625229-4624867 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 253
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 181, 51

Conread position: 87-443
Cow position: chr29:21933349-21932989 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 161, 74

Conread position: 87-443
Cow position: chr29:41530613-41530981 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 268
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 103, 123

Conread position: 87-444
Cow position: chr29:38581732-38582103 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 259
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 70, 19

Conread position: 87-446
Cow position: chr29:17109735-17110094 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 252
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 161, 78

Conread position: 87-446
Cow position: chr29:25737652-25737282 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 117, 74

Conread position: 87-447
Cow position: chr29:13639603-13639230 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 161, 64

Conread position: 87-449
Cow position: chr29:42771425-42771777 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 239
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 85, 74

Conread position: 87-452
Cow position: chr29:25474671-25475066 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 87-452
Cow position: chr29:40583561-40583926 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 257
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 161, 71

Conread position: 87-485
Cow position: chr29:109473-109857 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 271
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 179, 94

Conread position: 87-529
Cow position: chr29:28775691-28775246 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 80

Conread position: 87-596
Cow position: chr29:6293704-6293172 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 51

Conread position: 88-400
Cow position: chr29:356091-356412 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 133, 93

Conread position: 88-400
Cow position: chr29:23697743-23698069 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 169, 94

Conread position: 88-424
Cow position: chr29:15738579-15738225 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 23

Conread position: 88-441
Cow position: chr29:5892611-5892977 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 248
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 69, 106

Conread position: 88-443
Cow position: chr29:22068983-22068611 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 261
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 58

Conread position: 88-444
Cow position: chr29:31928744-31929120 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 262
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 50, 26

Conread position: 88-446
Cow position: chr29:11915581-11915955 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 66, 230

Conread position: 88-449
Cow position: chr29:7041070-7040730 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 34

Conread position: 89-205
Cow position: chr29:22720893-22721012 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 30

Conread position: 89-250
Cow position: chr29:41747206-41747363 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 89-259
Cow position: chr29:2744506-2744344 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 89-262
Cow position: chr29:42886146-42886318 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 63, 101

Conread position: 89-262
Cow position: chr29:44310263-44310095 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 108

Conread position: 89-265
Cow position: chr29:21236882-21237054 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 57

Conread position: 89-266
Cow position: chr29:3395876-3396041 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 89-267
Cow position: chr29:19338745-19338927 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 70, 110

Conread position: 89-390
Cow position: chr29:23844597-23844919 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 122

Conread position: 89-408
Cow position: chr29:2984650-2984989 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 159, 118

Conread position: 89-507
Cow position: chr29:34744851-34744433 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 290
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 70, 76

Conread position: 90-406
Cow position: chr29:94782-94472 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 156, 91

Conread position: 91-444
Cow position: chr29:8669123-8669488 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 59, 128

Conread position: 91-571
Cow position: chr29:43495827-43496325 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 343
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 171, 83

Conread position: 93-342
Cow position: chr29:39642946-39643202 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 172, 63

Conread position: 93-397
Cow position: chr29:868542-868863 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 115

Conread position: 93-425
Cow position: chr29:22936049-22936387 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 228
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 70

Conread position: 93-443
Cow position: chr29:14501360-14501725 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 249
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 119

Conread position: 94-418
Cow position: chr29:1229379-1229716 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 67, 51

Conread position: 96-434
Cow position: chr29:22778410-22778048 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 263
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 111

Conread position: 98-443
Cow position: chr29:3711161-3711506 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 165, 79

Conread position: 100-449
Cow position: chr29:23155027-23155365 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 102

Conread position: 101-267
Cow position: chr29:2532839-2532999 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 105

Conread position: 106-375
Cow position: chr29:463871-463588 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 210
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 159, 101

Conread position: 106-463
Cow position: chr29:40299230-40298866 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 46, 73

Conread position: 108-250
Cow position: chr29:14484761-14484625 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 108-425
Cow position: chr29:28166433-28166106 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 104

Conread position: 108-439
Cow position: chr29:40096741-40097094 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 107

Conread position: 111-516
Cow position: chr29:38580763-38581186 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 296
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 90

Conread position: 112-449
Cow position: chr29:26654252-26653900 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 89

Conread position: 116-397
Cow position: chr29:41364902-41365197 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 40, 92

Conread position: 118-447
Cow position: chr29:36209959-36210280 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 226, 46

Conread position: 119-483
Cow position: chr29:11054058-11053679 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 130, 19

Conread position: 121-434
Cow position: chr29:11433920-11434243 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 125, 86

Conread position: 123-449
Cow position: chr29:39329797-39329461 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 12

Conread position: 123-465
Cow position: chr29:1022089-1022447 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 249
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 89

Conread position: 124-405
Cow position: chr29:3100461-3100171 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 80

Conread position: 127-425
Cow position: chr29:28979676-28979387 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 138, 54

Conread position: 133-456
Cow position: chr29:32211250-32210922 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 31, 78

Conread position: 135-508
Cow position: chr29:4334539-4334917 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 270
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 113, 67

Conread position: 156-424
Cow position: chr29:4085152-4085423 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 90, 51

Conread position: 164-493
Cow position: chr29:26416201-26416537 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 38, 82

Conread position: 266-469
Cow position: chr29:2263040-2262837 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 16

Conread position: 288-433
Cow position: chr29:396386-396529 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 14

Conread position: 341-584
Cow position: chr29:32301784-32302020 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 94, 6

Conread position: 443-596
Cow position: chr29:2623417-2623260 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 148

Conread position: 444-598
Cow position: chr29:17022251-17022403 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 21

Show alignments to all cow chromosomes.