Cow genome map

Conread name: Ss1.1-rsag040_h9.5

Conread position: 26-289
Cow position:
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 30-298
Cow position:
Alignm length: 273
Alignm identity: 183
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 94

Conread position: 31-290
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 23, 119

Conread position: 31-291
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 31-298
Cow position:
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 31-298
Cow position:
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 186

Conread position: 31-298
Cow position:
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 32-186
Cow position:
Alignm length: 160
Alignm identity: 127
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 32-219
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 89, 51

Conread position: 32-222
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 19

Conread position: 32-226
Cow position:
Alignm length: 201
Alignm identity: 158
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 32-231
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 173, 49

Conread position: 32-276
Cow position:
Alignm length: 252
Alignm identity: 169
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 6

Conread position: 32-279
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 48, 191

Conread position: 32-280
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 52, 12

Conread position: 32-285
Cow position:
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 13

Conread position: 32-290
Cow position:
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-290
Cow position:
Alignm length: 260
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 171, 38

Conread position: 32-290
Cow position:
Alignm length: 260
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 48

Conread position: 32-290
Cow position:
Alignm length: 265
Alignm identity: 181
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 47, 196

Conread position: 32-290
Cow position:
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-290
Cow position:
Alignm length: 261
Alignm identity: 176
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 89, 12

Conread position: 32-290
Cow position:
Alignm length: 265
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-291
Cow position:
Alignm length: 270
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 27

Conread position: 32-291
Cow position:
Alignm length: 267
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 166

Conread position: 32-291
Cow position:
Alignm length: 266
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-291
Cow position:
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-291
Cow position:
Alignm length: 266
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-291
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 150

Conread position: 32-292
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 48, 6

Conread position: 32-293
Cow position:
Alignm length: 269
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-293
Cow position:
Alignm length: 267
Alignm identity: 180
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 66, 43

Conread position: 32-293
Cow position:
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 223

Conread position: 32-298
Cow position:
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position:
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 12

Conread position: 32-298
Cow position:
Alignm length: 272
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 6

Conread position: 32-298
Cow position:
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 48, 60

Conread position: 32-298
Cow position:
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 255

Conread position: 32-298
Cow position:
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 156

Conread position: 32-298
Cow position:
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 32-298
Cow position:
Alignm length: 278
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 129

Conread position: 32-298
Cow position:
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position:
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 12

Conread position: 32-298
Cow position:
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position:
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 6

Conread position: 32-298
Cow position:
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position:
Alignm length: 270
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 194

Conread position: 32-298
Cow position:
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 185

Conread position: 32-298
Cow position:
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 16

Conread position: 32-305
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 33-246
Cow position:
Alignm length: 216
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 43

Conread position: 33-289
Cow position:
Alignm length: 264
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 79

Conread position: 35-212
Cow position:
Alignm length: 180
Alignm identity: 143
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 65

Conread position: 35-240
Cow position:
Alignm length: 209
Alignm identity: 128
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 8

Conread position: 35-290
Cow position:
Alignm length: 262
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 72

Conread position: 35-291
Cow position:
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 90

Conread position: 35-297
Cow position:
Alignm length: 269
Alignm identity: 192
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 45, 165

Conread position: 35-298
Cow position:
Alignm length: 270
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 119

Conread position: 35-298
Cow position:
Alignm length: 277
Alignm identity: 205
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 40, 87

Conread position: 38-274
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 42, 14

Conread position: 38-298
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 7

Conread position: 39-257
Cow position:
Alignm length: 222
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 6

Conread position: 39-279
Cow position:
Alignm length: 248
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 99

Conread position: 40-298
Cow position:
Alignm length: 270
Alignm identity: 180
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 89

Conread position: 44-292
Cow position:
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 209

Conread position: 45-240
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 45-285
Cow position:
Alignm length: 250
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 5, 187

Conread position: 45-293
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 157

Conread position: 45-298
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 78

Conread position: 47-230
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 68

Conread position: 47-298
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 33

Conread position: 49-243
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 49-285
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 171

Conread position: 52-292
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 17

Conread position: 52-298
Cow position:
Alignm length: 253
Alignm identity: 166
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 210

Conread position: 52-299
Cow position:
Alignm length: 253
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 51

Conread position: 53-260
Cow position:
Alignm length: 212
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 13

Conread position: 53-290
Cow position:
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 170

Conread position: 53-298
Cow position:
Alignm length: 252
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 53-298
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 54-298
Cow position:
Alignm length: 250
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 55-298
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 7, 26

Conread position: 57-298
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 214

Conread position: 59-236
Cow position:
Alignm length: 184
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 60

Conread position: 59-292
Cow position:
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 203

Conread position: 59-293
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 20, 107

Conread position: 59-298
Cow position:
Alignm length: 246
Alignm identity: 162
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 54

Conread position: 62-291
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 102

Conread position: 62-298
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 48

Conread position: 63-298
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 16, 41

Conread position: 64-280
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 58

Conread position: 70-275
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 61

Conread position: 70-298
Cow position:
Alignm length: 232
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 9

Conread position: 71-291
Cow position:
Alignm length: 227
Alignm identity: 173
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 9, 43

Conread position: 71-293
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 50, 81

Conread position: 78-298
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 147

Conread position: 83-291
Cow position:
Alignm length: 211
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 152

Conread position: 91-293
Cow position:
Alignm length: 204
Alignm identity: 160
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 114, 0

Conread position: 112-269
Cow position:
Alignm length: 161
Alignm identity: 130
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 9

Conread position: 115-280
Cow position:
Alignm length: 168
Alignm identity: 137
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 6, 0

Conread position: 124-290
Cow position:
Alignm length: 168
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 127-314
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 35, 173

Conread position: 129-293
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 8

Conread position: 129-298
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 76, 0

Conread position: 132-298
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 74, 33

Conread position: 139-298
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 92

Conread position: 154-298
Cow position:
Alignm length: 146
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 156-294
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 206-298
Cow position:
Alignm length: 93
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.