Cow genome map
| Conread name: | Ss1.1-rsag040_h9.5 |
| Conread position: | 13-294 |
| Cow position: | chr11:12357269-12356982 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 14-225 |
| Cow position: | chr11:40329850-40329633 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 19-293 |
| Cow position: | chr11:67154822-67155096 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 61 |
| Conread position: | 19-298 |
| Cow position: | chr11:20733096-20732810 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 19-298 |
| Cow position: | chr11:32452970-32453255 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 19-298 |
| Cow position: | chr11:47759138-47758855 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 59 |
| Conread position: | 20-221 |
| Cow position: | chr11:52808498-52808698 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 13, 25 |
| Conread position: | 25-285 |
| Cow position: | chr11:26069894-26069631 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 25-298 |
| Cow position: | chr11:29667450-29667171 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 29-280 |
| Cow position: | chr11:26073812-26073564 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 162 |
| Conread position: | 31-290 |
| Cow position: | chr11:44582191-44581927 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 31-298 |
| Cow position: | chr11:26548680-26548952 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 148 |
| Conread position: | 31-298 |
| Cow position: | chr11:27668845-27668571 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 51, 242 |
| Conread position: | 32-172 |
| Cow position: | chr11:29612843-29612698 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-204 |
| Cow position: | chr11:1494882-1494715 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 32-256 |
| Cow position: | chr11:10056655-10056881 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 32-275 |
| Cow position: | chr11:30122693-30122452 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 48, 120 |
| Conread position: | 32-275 |
| Cow position: | chr11:50949176-50948926 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 48, 160 |
| Conread position: | 32-279 |
| Cow position: | chr11:41234166-41234419 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-280 |
| Cow position: | chr11:11989285-11989535 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 48, 6 |
| Conread position: | 32-289 |
| Cow position: | chr11:4055174-4054923 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 13 |
| Conread position: | 32-289 |
| Cow position: | chr11:47738388-47738133 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 48, 144 |
| Conread position: | 32-290 |
| Cow position: | chr11:19101341-19101079 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 48, 30 |
| Conread position: | 32-290 |
| Cow position: | chr11:58135546-58135804 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 147 |
| Conread position: | 32-290 |
| Cow position: | chr11:63654182-63653918 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-290 |
| Cow position: | chr11:72309886-72309624 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 32-291 |
| Cow position: | chr11:11590118-11590383 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 111 |
| Conread position: | 32-291 |
| Cow position: | chr11:17119192-17118925 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-291 |
| Cow position: | chr11:23249318-23249053 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-291 |
| Cow position: | chr11:30253381-30253640 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 32-291 |
| Cow position: | chr11:31927307-31927572 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 32-291 |
| Cow position: | chr11:38834296-38834031 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-291 |
| Cow position: | chr11:43513472-43513212 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 206 |
| Conread position: | 32-291 |
| Cow position: | chr11:50836516-50836251 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-291 |
| Cow position: | chr11:52420554-52420808 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 32-291 |
| Cow position: | chr11:53286017-53285756 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 32-291 |
| Cow position: | chr11:67845419-67845155 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 6 |
| Conread position: | 32-291 |
| Cow position: | chr11:73134455-73134719 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 114 |
| Conread position: | 32-292 |
| Cow position: | chr11:67451644-67451910 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 32-293 |
| Cow position: | chr11:13048612-13048349 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 48, 27 |
| Conread position: | 32-293 |
| Cow position: | chr11:26784408-26784670 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 32-298 |
| Cow position: | chr11:3494141-3494413 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr11:10848604-10848874 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 32-298 |
| Cow position: | chr11:15986403-15986666 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 159 |
| Conread position: | 32-298 |
| Cow position: | chr11:17106530-17106258 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr11:17281328-17281055 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 13 |
| Conread position: | 32-298 |
| Cow position: | chr11:19062925-19062653 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr11:21475273-21475544 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 47, 6 |
| Conread position: | 32-298 |
| Cow position: | chr11:26123775-26123495 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 233 |
| Conread position: | 32-298 |
| Cow position: | chr11:28228616-28228344 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr11:41169544-41169269 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr11:44517712-44517442 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr11:49039227-49038957 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 32-298 |
| Cow position: | chr11:49238799-49238533 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 32-298 |
| Cow position: | chr11:53430879-53430610 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 32-298 |
| Cow position: | chr11:57626900-57626629 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 262 |
| Conread position: | 32-298 |
| Cow position: | chr11:75553857-75553592 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 47, 6 |
| Conread position: | 32-298 |
| Cow position: | chr11:76372849-76372607 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 32-298 |
| Cow position: | chr11:85392682-85392410 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 168 |
| Conread position: | 32-301 |
| Cow position: | chr11:10883443-10883717 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 32-304 |
| Cow position: | chr11:31754896-31754630 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 33-154 |
| Cow position: | chr11:44041712-44041838 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 33-224 |
| Cow position: | chr11:59628430-59628242 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 91 |
| Conread position: | 33-264 |
| Cow position: | chr11:13064832-13064596 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 190 |
| Conread position: | 33-291 |
| Cow position: | chr11:40774849-40774611 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 7, 78 |
| Conread position: | 33-298 |
| Cow position: | chr11:1489015-1488748 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 34-298 |
| Cow position: | chr11:24394469-24394737 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 46, 32 |
| Conread position: | 35-291 |
| Cow position: | chr11:9155994-9155741 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 155 |
| Conread position: | 35-291 |
| Cow position: | chr11:23881183-23881438 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 35-292 |
| Cow position: | chr11:29231820-29231564 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 28, 48 |
| Conread position: | 35-298 |
| Cow position: | chr11:25393350-25393613 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 35-298 |
| Cow position: | chr11:86876730-86876460 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 37-292 |
| Cow position: | chr11:3104289-3104030 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 47, 91 |
| Conread position: | 38-178 |
| Cow position: | chr11:25865684-25865542 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 38-195 |
| Cow position: | chr11:9215351-9215189 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 38-224 |
| Cow position: | chr11:4034235-4034046 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 38-292 |
| Cow position: | chr11:35894745-35894488 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 7 |
| Conread position: | 38-298 |
| Cow position: | chr11:27657586-27657861 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 45-298 |
| Cow position: | chr11:66730246-66730510 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 47-272 |
| Cow position: | chr11:30208299-30208526 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 32, 77 |
| Conread position: | 47-296 |
| Cow position: | chr11:4026445-4026190 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 49-291 |
| Cow position: | chr11:61399932-61399688 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 51-298 |
| Cow position: | chr11:32079617-32079364 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 149 |
| Conread position: | 52-292 |
| Cow position: | chr11:4062731-4062495 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 53-298 |
| Cow position: | chr11:9733508-9733259 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 136 |
| Conread position: | 53-298 |
| Cow position: | chr11:17547330-17547581 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 54-237 |
| Cow position: | chr11:12372663-12372474 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 54-292 |
| Cow position: | chr11:7117584-7117829 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 54-294 |
| Cow position: | chr11:31863258-31863506 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 54-298 |
| Cow position: | chr11:37802238-37802486 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 55-279 |
| Cow position: | chr11:71330774-71331004 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 55-292 |
| Cow position: | chr11:39804898-39805152 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 7 |
| Conread position: | 59-235 |
| Cow position: | chr11:80473112-80472929 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 59-236 |
| Cow position: | chr11:33976893-33976715 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 12, 63 |
| Conread position: | 59-274 |
| Cow position: | chr11:3856387-3856601 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 20, 51 |
| Conread position: | 59-289 |
| Cow position: | chr11:23126485-23126255 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 20, 147 |
| Conread position: | 59-291 |
| Cow position: | chr11:49552973-49552735 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 59-293 |
| Cow position: | chr11:87142760-87143000 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 59-298 |
| Cow position: | chr11:64355985-64356223 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 79 |
| Conread position: | 70-292 |
| Cow position: | chr11:21889322-21889101 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 51, 5 |
| Conread position: | 70-293 |
| Cow position: | chr11:63647255-63647480 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 121, 51 |
| Conread position: | 70-298 |
| Cow position: | chr11:34018197-34018426 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 74-298 |
| Cow position: | chr11:10957015-10957239 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 132, 27 |
| Conread position: | 94-290 |
| Cow position: | chr11:4268961-4268762 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 109-298 |
| Cow position: | chr11:11578513-11578318 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 12, 122 |
| Conread position: | 115-291 |
| Cow position: | chr11:44155761-44155584 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 6, 84 |
| Conread position: | 126-292 |
| Cow position: | chr11:35254051-35253883 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 133-293 |
| Cow position: | chr11:54483733-54483573 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 72, 91 |
| Conread position: | 134-298 |
| Cow position: | chr11:40405794-40405629 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 144-298 |
| Cow position: | chr11:44041976-44042131 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 155-298 |
| Cow position: | chr11:21470093-21470237 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 157-298 |
| Cow position: | chr11:12318745-12318603 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 163-291 |
| Cow position: | chr11:47728404-47728275 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.