Cow genome map

Conread name: Ss1.1-rsag040_h9.5

Conread position: 24-256
Cow position:
Alignm length: 240
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 228

Conread position: 25-298
Cow position:
Alignm length: 276
Alignm identity: 203
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 96, 9

Conread position: 30-290
Cow position:
Alignm length: 267
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 30-291
Cow position:
Alignm length: 264
Alignm identity: 157
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 174, 94

Conread position: 30-298
Cow position:
Alignm length: 271
Alignm identity: 198
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 34, 29

Conread position: 31-290
Cow position:
Alignm length: 267
Alignm identity: 198
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 49, 13

Conread position: 31-291
Cow position:
Alignm length: 267
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 32-198
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 125

Conread position: 32-289
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 93

Conread position: 32-291
Cow position:
Alignm length: 267
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 48, 37

Conread position: 32-291
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 32-291
Cow position:
Alignm length: 266
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-292
Cow position:
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 6

Conread position: 32-292
Cow position:
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-293
Cow position:
Alignm length: 265
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 32-297
Cow position:
Alignm length: 272
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 97

Conread position: 32-298
Cow position:
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 51

Conread position: 32-298
Cow position:
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 93

Conread position: 32-298
Cow position:
Alignm length: 281
Alignm identity: 197
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position:
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 240

Conread position: 32-298
Cow position:
Alignm length: 273
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 32-298
Cow position:
Alignm length: 273
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 18

Conread position: 32-298
Cow position:
Alignm length: 274
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 32-298
Cow position:
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 30

Conread position: 32-298
Cow position:
Alignm length: 275
Alignm identity: 198
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 45, 258

Conread position: 33-288
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 102

Conread position: 34-214
Cow position:
Alignm length: 186
Alignm identity: 148
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 34-298
Cow position:
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 254

Conread position: 35-293
Cow position:
Alignm length: 262
Alignm identity: 191
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 13

Conread position: 38-280
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 41, 69

Conread position: 38-285
Cow position:
Alignm length: 251
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 39-187
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 82, 0

Conread position: 41-298
Cow position:
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 42-290
Cow position:
Alignm length: 256
Alignm identity: 191
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 44-274
Cow position:
Alignm length: 237
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 45-248
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 106

Conread position: 45-298
Cow position:
Alignm length: 260
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 52-272
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 70, 145

Conread position: 53-292
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 27

Conread position: 53-298
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 68, 13

Conread position: 53-298
Cow position:
Alignm length: 254
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 220

Conread position: 55-298
Cow position:
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 57-277
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 149, 23

Conread position: 59-298
Cow position:
Alignm length: 243
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 89

Conread position: 61-292
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 192

Conread position: 62-298
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 47

Conread position: 82-280
Cow position:
Alignm length: 202
Alignm identity: 158
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 87-274
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 118, 39

Conread position: 94-298
Cow position:
Alignm length: 207
Alignm identity: 164
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 190

Conread position: 107-277
Cow position:
Alignm length: 172
Alignm identity: 139
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 98, 156

Conread position: 114-298
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 7, 146

Conread position: 119-291
Cow position:
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 0

Conread position: 120-299
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 123-293
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 24

Conread position: 128-278
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 11

Conread position: 141-291
Cow position:
Alignm length: 152
Alignm identity: 122
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 67, 0

Show alignments to all cow chromosomes.