Cow genome map
| Conread name: | Ss1.1-rsag040_h9.5 |
| Conread position: | 19-291 |
| Cow position: | chr15:15346025-15345751 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 19-298 |
| Cow position: | chr15:7929660-7929933 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 20-231 |
| Cow position: | chr15:611214-611007 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 23-290 |
| Cow position: | chr15:21915092-21915358 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 107, 60 |
| Conread position: | 24-274 |
| Cow position: | chr15:11626753-11626995 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 87 |
| Conread position: | 24-298 |
| Cow position: | chr15:9737836-9737562 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 25-279 |
| Cow position: | chr15:32479511-32479252 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 54, 239 |
| Conread position: | 25-291 |
| Cow position: | chr15:7545949-7546230 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 205 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 25-292 |
| Cow position: | chr15:5981447-5981715 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 112 |
| Conread position: | 26-293 |
| Cow position: | chr15:36624760-36624497 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 27-298 |
| Cow position: | chr15:32712324-32712601 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 30-291 |
| Cow position: | chr15:17294144-17294406 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 24, 158 |
| Conread position: | 31-274 |
| Cow position: | chr15:4813686-4813922 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 31-275 |
| Cow position: | chr15:7261697-7261941 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 31-291 |
| Cow position: | chr15:24296183-24296444 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 31-291 |
| Cow position: | chr15:32067516-32067252 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 32-221 |
| Cow position: | chr15:20360997-20360806 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 155 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 32-240 |
| Cow position: | chr15:1773596-1773806 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 166 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 32-256 |
| Cow position: | chr15:44071693-44071920 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 32-264 |
| Cow position: | chr15:580520-580747 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 32-265 |
| Cow position: | chr15:4951192-4951431 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 32-267 |
| Cow position: | chr15:50148173-50148419 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 48, 198 |
| Conread position: | 32-268 |
| Cow position: | chr15:7892255-7892013 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 32-273 |
| Cow position: | chr15:24288378-24288137 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 32-274 |
| Cow position: | chr15:14581268-14581023 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-274 |
| Cow position: | chr15:25653974-25653727 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 221 |
| Conread position: | 32-277 |
| Cow position: | chr15:3008750-3008501 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 32-278 |
| Cow position: | chr15:42531012-42531256 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 48 |
| Conread position: | 32-279 |
| Cow position: | chr15:51675810-51676066 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 48, 246 |
| Conread position: | 32-285 |
| Cow position: | chr15:9912139-9911881 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 113 |
| Conread position: | 32-285 |
| Cow position: | chr15:50122839-50122583 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 48, 191 |
| Conread position: | 32-288 |
| Cow position: | chr15:53299562-53299816 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 178 |
| Conread position: | 32-289 |
| Cow position: | chr15:2588356-2588092 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 32-290 |
| Cow position: | chr15:35646586-35646328 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 32-290 |
| Cow position: | chr15:53313804-53314054 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 11 |
| Conread position: | 32-291 |
| Cow position: | chr15:107093-107358 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-291 |
| Cow position: | chr15:2646557-2646296 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 32-291 |
| Cow position: | chr15:3260228-3259964 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 32-291 |
| Cow position: | chr15:4141642-4141380 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 32-291 |
| Cow position: | chr15:4686821-4687087 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 32-291 |
| Cow position: | chr15:6561679-6561944 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-291 |
| Cow position: | chr15:6613814-6614078 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 238 |
| Conread position: | 32-291 |
| Cow position: | chr15:17036564-17036300 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 47, 128 |
| Conread position: | 32-291 |
| Cow position: | chr15:20411690-20411953 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 32-291 |
| Cow position: | chr15:33122470-33122735 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-291 |
| Cow position: | chr15:35898684-35898419 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-291 |
| Cow position: | chr15:41659260-41659525 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-291 |
| Cow position: | chr15:50869431-50869695 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 32-292 |
| Cow position: | chr15:2926405-2926649 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 44, 6 |
| Conread position: | 32-292 |
| Cow position: | chr15:8751489-8751752 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 6 |
| Conread position: | 32-293 |
| Cow position: | chr15:6279571-6279833 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 137 |
| Conread position: | 32-293 |
| Cow position: | chr15:7964852-7964589 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 81 |
| Conread position: | 32-294 |
| Cow position: | chr15:4916266-4916534 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 48, 67 |
| Conread position: | 32-298 |
| Cow position: | chr15:1767933-1768192 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 6 |
| Conread position: | 32-298 |
| Cow position: | chr15:2901169-2900896 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr15:4197559-4197831 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr15:4672526-4672797 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 147 |
| Conread position: | 32-298 |
| Cow position: | chr15:4726294-4726566 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr15:4923238-4923509 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 96 |
| Conread position: | 32-298 |
| Cow position: | chr15:4962726-4962978 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 32-298 |
| Cow position: | chr15:5010539-5010268 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 240 |
| Conread position: | 32-298 |
| Cow position: | chr15:6383061-6382797 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 32-298 |
| Cow position: | chr15:7564089-7564362 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr15:7838361-7838633 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr15:11293345-11293080 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 32-298 |
| Cow position: | chr15:18266683-18266401 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 48, 112 |
| Conread position: | 32-298 |
| Cow position: | chr15:18331741-18331469 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr15:19736963-19736692 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 32-298 |
| Cow position: | chr15:20355498-20355234 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 46, 95 |
| Conread position: | 32-298 |
| Cow position: | chr15:21664646-21664378 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 6 |
| Conread position: | 32-298 |
| Cow position: | chr15:24794916-24795182 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 50 |
| Conread position: | 32-298 |
| Cow position: | chr15:25205912-25205642 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr15:31359963-31360228 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 12 |
| Conread position: | 32-298 |
| Cow position: | chr15:32492791-32492519 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 106 |
| Conread position: | 32-298 |
| Cow position: | chr15:35736889-35737159 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 6 |
| Conread position: | 32-298 |
| Cow position: | chr15:35752213-35751941 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 32-298 |
| Cow position: | chr15:53410006-53410271 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 32-301 |
| Cow position: | chr15:2013651-2013927 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 273 |
| Conread position: | 32-305 |
| Cow position: | chr15:53339313-53339594 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 100 |
| Conread position: | 32-313 |
| Cow position: | chr15:9003129-9002842 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 12 |
| Conread position: | 32-314 |
| Cow position: | chr15:17077470-17077183 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 260 |
| Conread position: | 33-186 |
| Cow position: | chr15:6485673-6485830 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 47, 5 |
| Conread position: | 33-293 |
| Cow position: | chr15:3181966-3181707 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 34-261 |
| Cow position: | chr15:7551243-7551470 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 34-293 |
| Cow position: | chr15:6479484-6479739 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 124 |
| Conread position: | 34-298 |
| Cow position: | chr15:6154832-6154562 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 34-299 |
| Cow position: | chr15:2763889-2764161 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 23, 125 |
| Conread position: | 35-276 |
| Cow position: | chr15:1830491-1830259 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 35-285 |
| Cow position: | chr15:36668805-36669055 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 35-289 |
| Cow position: | chr15:28489056-28488798 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 35-291 |
| Cow position: | chr15:51218816-51219081 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 35-298 |
| Cow position: | chr15:329429-329697 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 50, 79 |
| Conread position: | 35-298 |
| Cow position: | chr15:4386852-4387121 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 36-301 |
| Cow position: | chr15:2412354-2412092 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 38-266 |
| Cow position: | chr15:6079844-6080075 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 38-279 |
| Cow position: | chr15:4652470-4652715 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 38-290 |
| Cow position: | chr15:58754-59008 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 42, 54 |
| Conread position: | 38-291 |
| Cow position: | chr15:1299449-1299173 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 38-291 |
| Cow position: | chr15:4766289-4766550 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 38-298 |
| Cow position: | chr15:1765416-1765680 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 126 |
| Conread position: | 38-298 |
| Cow position: | chr15:1833540-1833275 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 162 |
| Conread position: | 38-298 |
| Cow position: | chr15:3890010-3890268 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 38-298 |
| Cow position: | chr15:10478427-10478162 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 42, 137 |
| Conread position: | 45-298 |
| Cow position: | chr15:2077758-2078013 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 45-298 |
| Cow position: | chr15:31846550-31846809 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 101 |
| Conread position: | 47-298 |
| Cow position: | chr15:8698819-8698570 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 47-298 |
| Cow position: | chr15:24718434-24718688 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 49-291 |
| Cow position: | chr15:6591007-6590758 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 138 |
| Conread position: | 49-293 |
| Cow position: | chr15:368539-368294 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 5, 99 |
| Conread position: | 52-293 |
| Cow position: | chr15:44301989-44301747 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 53-238 |
| Cow position: | chr15:1879131-1878943 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 53-248 |
| Cow position: | chr15:2799666-2799459 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 53-293 |
| Cow position: | chr15:41219900-41219666 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 152, 20 |
| Conread position: | 53-298 |
| Cow position: | chr15:8100574-8100814 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 27, 193 |
| Conread position: | 53-298 |
| Cow position: | chr15:18577826-18578079 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 54-276 |
| Cow position: | chr15:4679396-4679619 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 137 |
| Conread position: | 54-291 |
| Cow position: | chr15:7235442-7235682 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 5 |
| Conread position: | 55-298 |
| Cow position: | chr15:32719553-32719316 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 59-279 |
| Cow position: | chr15:51716534-51716765 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 59-298 |
| Cow position: | chr15:13390202-13389960 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 59-298 |
| Cow position: | chr15:17217024-17216789 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 59-299 |
| Cow position: | chr15:17149234-17149476 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 62-231 |
| Cow position: | chr15:21948034-21947861 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 22, 140 |
| Conread position: | 62-243 |
| Cow position: | chr15:1238807-1238994 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 71-292 |
| Cow position: | chr15:7939574-7939794 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 134, 54 |
| Conread position: | 92-298 |
| Cow position: | chr15:31859800-31859592 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 109-298 |
| Cow position: | chr15:51613312-51613501 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 169 |
| Conread position: | 115-295 |
| Cow position: | chr15:35272294-35272476 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 118-274 |
| Cow position: | chr15:31783746-31783593 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 120-291 |
| Cow position: | chr15:6552596-6552423 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 123-263 |
| Cow position: | chr15:6329242-6329383 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 123-279 |
| Cow position: | chr15:8811116-8810960 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 82, 121 |
| Conread position: | 133-290 |
| Cow position: | chr15:32695363-32695515 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 134-298 |
| Cow position: | chr15:4081036-4080871 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 137-291 |
| Cow position: | chr15:1783533-1783688 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 141-298 |
| Cow position: | chr15:19395752-19395588 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 163-298 |
| Cow position: | chr15:42685-42818 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.