Cow genome map


           Conread name:
           Ss1.1-rsag040_h9.5
        

               Conread position:
               4-298
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               30-291
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               31-203
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               48, 19
               

               Conread position:
               31-255
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               48, 156
               

               Conread position:
               31-290
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               32-238
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 29
               

               Conread position:
               32-255
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-271
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               48, 193
               

               Conread position:
               32-274
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               47, 60
               

               Conread position:
               32-289
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               32-290
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               32-290
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-291
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 226
               

               Conread position:
               32-291
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-291
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 19
               

               Conread position:
               32-291
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-293
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 56
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               48, 197
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               48, 93
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 16
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               89, 16
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 240
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               33-293
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               34-298
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 125
               

               Conread position:
               35-298
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 253
               

               Conread position:
               35-298
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               36-272
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               85, 43
               

               Conread position:
               36-273
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 169
               

               Conread position:
               38-293
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               40-280
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 91
               

               Conread position:
               40-290
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 129
               

               Conread position:
               45-293
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               45-294
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 142
               

               Conread position:
               48-187
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               53-298
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               53-298
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               54-186
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 51
               

               Conread position:
               57-298
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 101
               

               Conread position:
               59-274
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 180
               

               Conread position:
               63-293
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 16
               

               Conread position:
               76-298
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               91-298
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               30, 190
               

               Conread position:
               94-285
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               94-298
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               27, 174
               

               Conread position:
               103-231
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               120-298
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               121-274
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               132-298
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 92
               

               Conread position:
               133-298
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               147-298
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 90
               
Show alignments to all cow chromosomes.