Cow genome map


           Conread name:
           Ss1.1-rsag040_h9.5
        

               Conread position:
               20-298
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               26-298
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 100
               

               Conread position:
               28-298
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               52, 92
               

               Conread position:
               29-298
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 169
               

               Conread position:
               31-299
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 7
               

               Conread position:
               32-281
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-288
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-290
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               48, 119
               

               Conread position:
               32-290
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               32-291
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-291
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-291
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-293
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 91
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 223
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 87
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               78, 16
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 19
               

               Conread position:
               32-325
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               38-280
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               38-298
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               45-240
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               34, 120
               

               Conread position:
               47-293
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               29, 57
               

               Conread position:
               47-298
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               53-292
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 113
               

               Conread position:
               53-296
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 66
               

               Conread position:
               59-298
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               60-240
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               92-257
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               124-298
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               161-298
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 110
               

               Conread position:
               169-298
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               195-298
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 0
               
Show alignments to all cow chromosomes.