Cow genome map


           Conread name:
           Ss1.1-rsag040_h9.5
        

               Conread position:
               27-298
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 224
               

               Conread position:
               29-181
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               7, 62
               

               Conread position:
               30-290
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               50, 151
               

               Conread position:
               31-290
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               31-290
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               32-219
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               32-264
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-285
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 30
               

               Conread position:
               32-290
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 6
               

               Conread position:
               32-290
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               32-290
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 12
               

               Conread position:
               32-291
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-293
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 6
               

               Conread position:
               32-293
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               22, 164
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 19
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               32-298
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               35-274
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               35-290
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 95
               

               Conread position:
               35-293
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               7, 178
               

               Conread position:
               35-298
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 16
               

               Conread position:
               37-298
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               45, 86
               

               Conread position:
               42-240
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               163
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               38, 81
               

               Conread position:
               45-279
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               52-274
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 60
               

               Conread position:
               53-298
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               59-274
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 177
               

               Conread position:
               59-291
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               146, 23
               

               Conread position:
               60-298
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 47
               

               Conread position:
               62-298
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               94-254
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 30
               

               Conread position:
               97-298
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 10
               

               Conread position:
               104-313
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               120-290
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               85, 0
               
Show alignments to all cow chromosomes.